Carg19696-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19696-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ankyrin repeat and KH domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_133 : 214296 .. 215789 (+)
Sequence length	1319

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTGGCTTTCTCTCTGCTACATGCGATCATCTAACGCTATAAACCCACCACACCCATCTGCCACTTTTCATTTTGATTCATTCATTTCACTTCCCCACACACATTCAACTTGGAGGGTCAGACATAACCCAGTTTTTTGTTTTGGGATTTGAGTTCAATTTTACACAAATTTGGCGAAAAATCTTGATAGATGTAAATAGATCATTGGTTGCTTGTTGAAATCGTTTGTGGAAAGTTCGTATTCTCTGTTTTTTTTGGGTTCCCATTCTGATCTGGGCTCTGTTTTCTTCTTGAATTTGCATTGCACACAACCTGTTTGATAATTTGCCTGAGAGAAAAAAAGGGTTGGGGAATATGGATTTGTTGGGTTCTGAGTGCAGCAGTGGGTGTGAGTCTGGTTGGACTTTGTATTTGGAGCAGTCTTTTCGTTCACAAGGCTGCTTAGATCACATTGTTGGCGGAGAGGAATATTGGAAAGCTAAAGGTTCTGAAGAAGAGGAAGAGGAAGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCACATTTCATAGAAGACGAAGCTTGCTCCCAAGAAGCATCAAAATCAGCCACATTGGGGAAGAGAAAGGGCAAAAAACAGAGAATTCAAGAACATCAATGCCAGGGGGAGCCTTCTTCTTCGTTCCTAGACGACACTGCTAGCTCTCCTGCTCTCAACTACACGGCTGTAAGTCTCCAACTCAATCTCTTTTAGCCCATTTTTAGCTTTGTTCTACAACGATTACACATTTTGGCCAATTGGGTACTCATTAAAGTTAGCTTCTTTCAAATCTTCAGAATAAGTTCACCAATCAAGCCTCAATGGAAAGCTTCTTGGGCTTCTCTCAAACTAGCCACTTCGAGGTACTTGACTATTTTACACTGTCGTTCTCCAAGATTGTACGACATTGTCCACTTTGAGCATAAGCTCTCGCCTTTGCTTTGGGTTTCTCCAAAAGCCAATGTATTACTTACTTGTTCATTCCTGAACAGCCATCACCAAGACAAATGCACATGTATTGACATTGTTTGTTGCTGTTGATGCAGGAAAGATCGGCCTGTACAGACCATTTTGGGTTCCTTCAAGCTTCTCTATCAGGAAATAGATTGCAGAAGAACCAGTTAAGCTACTTCCTCTGTTTTTGGGTAATCACTGGGCTTGTTTTTGAGCATTTTTGAACTGGATTGTTCTTATTCTGGTTCTTTAACAGGTGGTTTGAAGGCGAAGGAGGAGGGATAGGGATGAGATGAGATAAGTGGCCTTATTTTTGCACCACTTTCTTCTTAAAAATGCGTGGGAAATGGATCTGCTGAAGAGATGGGCTTTGTTTCCCTGTTTTTTTGTTCATTTCTTTCCTTTTTGTAACGATCAATGCAATGGGAACCATTCGTGGTGAGAGATTTGTGAATTGGAAACAAATCTGAGTAATTTTTAGAACAAAATCACAAGACCCACTAACTTTCATC

mRNA sequence

TTCTGGCTTTCTCTCTGCTACATGCGATCATCTAACGCTATAAACCCACCACACCCATCTGCCACTTTTCATTTTGATTCATTCATTTCACTTCCCCACACACATTCAACTTGGAGGGTCAGACATAACCCAGTTTTTTGTTTTGGGATTTGAGTTCAATTTTACACAAATTTGGCGAAAAATCTTGATAGATGTAAATAGATCATTGGTTGCTTGTTGAAATCGTTTGTGGAAAGTTCGTATTCTCTGTTTTTTTTGGGTTCCCATTCTGATCTGGGCTCTGTTTTCTTCTTGAATTTGCATTGCACACAACCTGTTTGATAATTTGCCTGAGAGAAAAAAAGGGTTGGGGAATATGGATTTGTTGGGTTCTGAGTGCAGCAGTGGGTGTGAGTCTGGTTGGACTTTGTATTTGGAGCAGTCTTTTCGTTCACAAGGCTGCTTAGATCACATTGTTGGCGGAGAGGAATATTGGAAAGCTAAAGGTTCTGAAGAAGAGGAAGAGGAAGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCACATTTCATAGAAGACGAAGCTTGCTCCCAAGAAGCATCAAAATCAGCCACATTGGGGAAGAGAAAGGGCAAAAAACAGAGAATTCAAGAACATCAATGCCAGGGGGAGCCTTCTTCTTCGTTCCTAGACGACACTGCTAGCTCTCCTGCTCTCAACTACACGGCTAATAAGTTCACCAATCAAGCCTCAATGGAAAGCTTCTTGGGCTTCTCTCAAACTAGCCACTTCGAGGTACTTGACTATTTTACACTGTCGTTCTCCAAGATTGTACGACATTGTCCACTTTGAGCATAAGCTCTCGCCTTTGCTTTGGGTTTCTCCAAAAGCCAATGTATTACTTACTTGTTCATTCCTGAACAGCCATCACCAAGACAAATGCACATGTATTGACATTGTTTGTTGCTGTTGATGCAGGAAAGATCGGCCTGTACAGACCATTTTGGGTTCCTTCAAGCTTCTCTATCAGGAAATAGATTGCAGAAGAACCAGTTAAGCTACTTCCTCTGTTTTTGGGTGGTTTGAAGGCGAAGGAGGAGGGATAGGGATGAGATGAGATAAGTGGCCTTATTTTTGCACCACTTTCTTCTTAAAAATGCGTGGGAAATGGATCTGCTGAAGAGATGGGCTTTGTTTCCCTGTTTTTTTGTTCATTTCTTTCCTTTTTGTAACGATCAATGCAATGGGAACCATTCGTGGTGAGAGATTTGTGAATTGGAAACAAATCTGAGTAATTTTTAGAACAAAATCACAAGACCCACTAACTTTCATC

Coding sequence (CDS)

ATGGATTTGTTGGGTTCTGAGTGCAGCAGTGGGTGTGAGTCTGGTTGGACTTTGTATTTGGAGCAGTCTTTTCGTTCACAAGGCTGCTTAGATCACATTGTTGGCGGAGAGGAATATTGGAAAGCTAAAGGTTCTGAAGAAGAGGAAGAGGAAGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCACATTTCATAGAAGACGAAGCTTGCTCCCAAGAAGCATCAAAATCAGCCACATTGGGGAAGAGAAAGGGCAAAAAACAGAGAATTCAAGAACATCAATGCCAGGGGGAGCCTTCTTCTTCGTTCCTAGACGACACTGCTAGCTCTCCTGCTCTCAACTACACGGCTAATAAGTTCACCAATCAAGCCTCAATGGAAAGCTTCTTGGGCTTCTCTCAAACTAGCCACTTCGAGGTACTTGACTATTTTACACTGTCGTTCTCCAAGATTGTACGACATTGTCCACTTTGA

Protein sequence

MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEDLSMVSDASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTANKFTNQASMESFLGFSQTSHFEVLDYFTLSFSKIVRHCPL

Homology

[Close]

BLAST of Carg19696-RA vs. NCBI nr
Match: XP_023552790.1 (uncharacterized protein LOC111810322 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.1 bits (627), Expect = 7.9e-62
Identity = 137/142 (96.48%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKXXXXXXXXXXXXXXXXX 60
           MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWK K XXXXXXXXXXXXXXX 
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKVKGXXXXXXXXXXXXXXXA 60

Query: 61  XSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTA 120
            SGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTA
Sbjct: 61  SSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTA 120

Query: 121 NKFTNQASMESFLGFSQTSHFE 143
           NKFT+QASMESFLGFSQTSHFE
Sbjct: 121 NKFTHQASMESFLGFSQTSHFE 142

[Close]

BLAST of Carg19696-RA vs. NCBI nr
Match: XP_022985339.1 (uncharacterized protein LOC111483377 isoform X2 [Cucurbita maxima])

HSP 1 Score: 239.6 bits (610), Expect = 7.4e-60
Identity = 139/144 (96.53%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKA--KXXXXXXXXXXXXXXX 60
           MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKA   XXXXXXXXXXXXXXX
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120
           XXXSGPPHFIEDEACSQ+ASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY
Sbjct: 61  XXXSGPPHFIEDEACSQDASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120

Query: 121 TANKFTNQASMESFLGFSQTSHFE 143
           TANKFTNQASM+SFLGFSQTSHFE
Sbjct: 121 TANKFTNQASMKSFLGFSQTSHFE 144

[Close]

BLAST of Carg19696-RA vs. NCBI nr
Match: XP_022985337.1 (uncharacterized protein LOC111483377 isoform X1 [Cucurbita maxima] >XP_022985338.1 uncharacterized protein LOC111483377 isoform X1 [Cucurbita maxima])

HSP 1 Score: 239.6 bits (610), Expect = 7.4e-60
Identity = 139/144 (96.53%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKA--KXXXXXXXXXXXXXXX 60
           MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKA   XXXXXXXXXXXXXXX
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120
           XXXSGPPHFIEDEACSQ+ASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY
Sbjct: 61  XXXSGPPHFIEDEACSQDASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120

Query: 121 TANKFTNQASMESFLGFSQTSHFE 143
           TANKFTNQASM+SFLGFSQTSHFE
Sbjct: 121 TANKFTNQASMKSFLGFSQTSHFE 144

[Close]

BLAST of Carg19696-RA vs. NCBI nr
Match: XP_022922888.1 (uncharacterized protein LOC111430730 [Cucurbita moschata])

HSP 1 Score: 236.5 bits (602), Expect = 6.3e-59
Identity = 140/153 (91.50%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKA--KXXXXXXXXXXXXXXX 60
           MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKA   XXXXXXXXXXXXXXX
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120
           XXX  PPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY
Sbjct: 61  XXXXXPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120

Query: 121 TANKFTNQASMESFLGFSQTSHFEVLDYFTLSF 152
           TANKFTNQASMESFLGFSQT+HFE +   T  F
Sbjct: 121 TANKFTNQASMESFLGFSQTNHFEEISACTDHF 153

[Close]

BLAST of Carg19696-RA vs. NCBI nr
Match: XP_004150275.1 (PREDICTED: uncharacterized protein LOC101222672 isoform X2 [Cucumis sativus] >KGN52744.1 hypothetical protein Csa_4G000650 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 7.5e-44
Identity = 121/169 (71.60%), Postives = 125/169 (73.96%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIV---GG---EEYWKAK-----XXXXXX 60
           MDLLGSECSSGCESGWTLYLEQSF S G   HIV   GG   E YWK K     XXXXXX
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFLSNGASHHIVAQEGGFCTEGYWKPKGTXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXSGPPHFIEDEACSQE-------ASKSATLGKRKGKKQRIQEHQCQGEP 120
           XXXXX       SGPPHFIEDEACS E        SKSATLGKRKGKKQRI+E+QCQ EP
Sbjct: 61  XXXXXSMVSDASSGPPHFIEDEACSHEDDAHFSDVSKSATLGKRKGKKQRIKEYQCQKEP 120

Query: 121 SSSFLDDTASSPALNYTANKFTNQASMESFLGFSQTSHFEVLDYFTLSF 152
            SSFLDDTASSPALN+TAN FTNQASMESFLG SQT+HFE    FT  F
Sbjct: 121 -SSFLDDTASSPALNFTANNFTNQASMESFLGLSQTNHFEERSAFTEHF 168

[Close]

BLAST of Carg19696-RA vs. TAIR10
Match: AT4G33800.1 (unknown protein)

HSP 1 Score: 44.3 bits (103), Expect = 8.3e-05
Identity = 56/153 (36.60%), Postives = 73/153 (47.71%), Query Frame = 0


Query: 3   LLGSECSSGCESGWTLYLEQS--------FRSQGCLDHIVGGEEYWKAK--XXXXXXXXX 62
           +LGS  SSGCESGWTLYL+QS        FR     D     ++ W       XXXXXXX
Sbjct: 1   MLGS--SSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQXXXXXXX 60

Query: 63  XXXXXXXXXSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTAS 122
           X        SGP +  E+++      K   +G +K  K+  ++ +   E  +S LDDTAS
Sbjct: 61  XLSMISDASSGPRNISEEDS----VKKINIVGLKKQCKR--EKKRRDYEKMNSLLDDTAS 120

Query: 123 SPALNYT--------ANKFTNQASMESFLGFSQ 138
           SP  N+          NK   Q   ES L +SQ
Sbjct: 121 SPLFNFPHMLQKSVGGNKI-EQTFPESTLDYSQ 144

[Close]

BLAST of Carg19696-RA vs. TrEMBL
Match: tr|A0A0A0KV02|A0A0A0KV02_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000650 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.9e-44
Identity = 121/169 (71.60%), Postives = 125/169 (73.96%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIV---GG---EEYWKAK-----XXXXXX 60
           MDLLGSECSSGCESGWTLYLEQSF S G   HIV   GG   E YWK K     XXXXXX
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFLSNGASHHIVAQEGGFCTEGYWKPKGTXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXSGPPHFIEDEACSQE-------ASKSATLGKRKGKKQRIQEHQCQGEP 120
           XXXXX       SGPPHFIEDEACS E        SKSATLGKRKGKKQRI+E+QCQ EP
Sbjct: 61  XXXXXSMVSDASSGPPHFIEDEACSHEDDAHFSDVSKSATLGKRKGKKQRIKEYQCQKEP 120

Query: 121 SSSFLDDTASSPALNYTANKFTNQASMESFLGFSQTSHFEVLDYFTLSF 152
            SSFLDDTASSPALN+TAN FTNQASMESFLG SQT+HFE    FT  F
Sbjct: 121 -SSFLDDTASSPALNFTANNFTNQASMESFLGLSQTNHFEERSAFTEHF 168

[Close]

BLAST of Carg19696-RA vs. TrEMBL
Match: tr|A0A1S3BZC0|A0A1S3BZC0_CUCME (uncharacterized protein LOC103494824 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103494824 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.1e-42
Identity = 118/169 (69.82%), Postives = 123/169 (72.78%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIV---GG---EEYWKAK-----XXXXXX 60
           MDLLGSE SSGCESGWTLYLEQSF S G   HIV   GG   E YWK +     XXXXXX
Sbjct: 1   MDLLGSESSSGCESGWTLYLEQSFLSNGASHHIVAQEGGFCTEGYWKPEGTEXXXXXXXX 60

Query: 61  XXXXXXXXXXXXSGPPHFIEDEACSQE-------ASKSATLGKRKGKKQRIQEHQCQGEP 120
           XXXX        SGPPHFIEDEACS E        SKSATLGKRKGKKQRI+E+QCQ EP
Sbjct: 61  XXXXLSMVSDASSGPPHFIEDEACSHEDDAHFSDVSKSATLGKRKGKKQRIKEYQCQKEP 120

Query: 121 SSSFLDDTASSPALNYTANKFTNQASMESFLGFSQTSHFEVLDYFTLSF 152
            SSFLDDTASSPALN+TAN FTNQASMESFLG SQT+HFE    FT  F
Sbjct: 121 -SSFLDDTASSPALNFTANNFTNQASMESFLGLSQTNHFEERSAFTEHF 168

[Close]

BLAST of Carg19696-RA vs. TrEMBL
Match: tr|A0A1S3BYJ3|A0A1S3BYJ3_CUCME (uncharacterized protein LOC103494824 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494824 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.1e-42
Identity = 118/169 (69.82%), Postives = 123/169 (72.78%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIV---GG---EEYWKAK-----XXXXXX 60
           MDLLGSE SSGCESGWTLYLEQSF S G   HIV   GG   E YWK +     XXXXXX
Sbjct: 1   MDLLGSESSSGCESGWTLYLEQSFLSNGASHHIVAQEGGFCTEGYWKPEGTEXXXXXXXX 60

Query: 61  XXXXXXXXXXXXSGPPHFIEDEACSQE-------ASKSATLGKRKGKKQRIQEHQCQGEP 120
           XXXX        SGPPHFIEDEACS E        SKSATLGKRKGKKQRI+E+QCQ EP
Sbjct: 61  XXXXLSMVSDASSGPPHFIEDEACSHEDDAHFSDVSKSATLGKRKGKKQRIKEYQCQKEP 120

Query: 121 SSSFLDDTASSPALNYTANKFTNQASMESFLGFSQTSHFEVLDYFTLSF 152
            SSFLDDTASSPALN+TAN FTNQASMESFLG SQT+HFE    FT  F
Sbjct: 121 -SSFLDDTASSPALNFTANNFTNQASMESFLGLSQTNHFEERSAFTEHF 168

[Close]

BLAST of Carg19696-RA vs. TrEMBL
Match: tr|E5GBH0|E5GBH0_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.1e-42
Identity = 118/169 (69.82%), Postives = 123/169 (72.78%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIV---GG---EEYWKAK-----XXXXXX 60
           MDLLGSE SSGCESGWTLYLEQSF S G   HIV   GG   E YWK +     XXXXXX
Sbjct: 1   MDLLGSESSSGCESGWTLYLEQSFLSNGASHHIVAQEGGFCTEGYWKPEGTEXXXXXXXX 60

Query: 61  XXXXXXXXXXXXSGPPHFIEDEACSQE-------ASKSATLGKRKGKKQRIQEHQCQGEP 120
           XXXX        SGPPHFIEDEACS E        SKSATLGKRKGKKQRI+E+QCQ EP
Sbjct: 61  XXXXLSMVSDASSGPPHFIEDEACSHEDDAHFSDVSKSATLGKRKGKKQRIKEYQCQKEP 120

Query: 121 SSSFLDDTASSPALNYTANKFTNQASMESFLGFSQTSHFEVLDYFTLSF 152
            SSFLDDTASSPALN+TAN FTNQASMESFLG SQT+HFE    FT  F
Sbjct: 121 -SSFLDDTASSPALNFTANNFTNQASMESFLGLSQTNHFEERSAFTEHF 168

[Close]

BLAST of Carg19696-RA vs. TrEMBL
Match: tr|A0A1S4DZT4|A0A1S4DZT4_CUCME (uncharacterized protein LOC103494824 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494824 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 96/138 (69.57%), Postives = 100/138 (72.46%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIV---GG---EEYWKAK-----XXXXXX 60
           MDLLGSE SSGCESGWTLYLEQSF S G   HIV   GG   E YWK +     XXXXXX
Sbjct: 1   MDLLGSESSSGCESGWTLYLEQSFLSNGASHHIVAQEGGFCTEGYWKPEGTEXXXXXXXX 60

Query: 61  XXXXXXXXXXXXSGPPHFIEDEACSQE-------ASKSATLGKRKGKKQRIQEHQCQGEP 120
           XXXX        SGPPHFIEDEACS E        SKSATLGKRKGKKQRI+E+QCQ EP
Sbjct: 61  XXXXLSMVSDASSGPPHFIEDEACSHEDDAHFSDVSKSATLGKRKGKKQRIKEYQCQKEP 120

The following BLAST results are available for this feature:

BLAST of Carg19696-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552790.1	7.9e-62	96.48	uncharacterized protein LOC111810322 [Cucurbita pepo subsp. pepo]	[more]
XP_022985339.1	7.4e-60	96.53	uncharacterized protein LOC111483377 isoform X2 [Cucurbita maxima]	[more]
XP_022985337.1	7.4e-60	96.53	uncharacterized protein LOC111483377 isoform X1 [Cucurbita maxima] >XP_022985338...	[more]
XP_022922888.1	6.3e-59	91.50	uncharacterized protein LOC111430730 [Cucurbita moschata]	[more]
XP_004150275.1	7.5e-44	71.60	PREDICTED: uncharacterized protein LOC101222672 isoform X2 [Cucumis sativus] >KG...	[more]

BLAST of Carg19696-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33800.1	8.3e-05	36.60	unknown protein	[more]

BLAST of Carg19696-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19696-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KV02\|A0A0A0KV02_CUCSA	4.9e-44	71.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000650 PE=4 SV=1	[more]
tr\|A0A1S3BZC0\|A0A1S3BZC0_CUCME	2.1e-42	69.82	uncharacterized protein LOC103494824 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BYJ3\|A0A1S3BYJ3_CUCME	2.1e-42	69.82	uncharacterized protein LOC103494824 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|E5GBH0\|E5GBH0_CUCME	2.1e-42	69.82	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S4DZT4\|A0A1S4DZT4_CUCME	1.1e-30	69.57	uncharacterized protein LOC103494824 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg19696	Carg19696	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg19696-RA	Carg19696-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19696-RA.exon.1	Carg19696-RA.exon.1	exon
Carg19696-RA.exon.2	Carg19696-RA.exon.2	exon
Carg19696-RA.exon.3	Carg19696-RA.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19696-RA.five_prime_UTR.1	Carg19696-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19696-RA.CDS.1	Carg19696-RA.CDS.1	CDS
Carg19696-RA.CDS.2	Carg19696-RA.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19696-RA.three_prime_UTR.1	Carg19696-RA.three_prime_UTR.1	three_prime_UTR
Carg19696-RA.three_prime_UTR.2	Carg19696-RA.three_prime_UTR.2	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..110
None	No IPR available	PANTHER	PTHR33347:SF5	SUBFAMILY NOT NAMED	coord: 1..140
None	No IPR available	PANTHER	PTHR33347	FAMILY NOT NAMED	coord: 1..140