Carg18104 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18104
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Tubulin-tyrosine ligase
Location	Cucurbita_argyrosperma_scaffold_095 : 413140 .. 415497 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAATACCTCAAGCAATCCAAGCGGAAATTAGTCATGTGGTTCACCAGAACCTTCAAGCCGATCATGACGCACGACGAGCTCGAACCTATTATGGCGACTCTAGGCTTTATCGGCCTCGAACCGGTTATTAACCGCGACGAAATCTCATGGAAATCATACGTATACTCCGGCGCTCATAGCCTGATCAAGTCAATGTCGACGACGGAGCGTCCGCCGATACCGCGATTGCCGTATCCGAGAGTCGACGGTCTTCACATTTATACGTACAGAGCATTTCTTGACGCAATCAATTTTTACCTCCAGAAATATAACATCTCCGATGTCTTCCATATTAGGTAAGAATGTCAATTCCTTTTGATTTTATGCTTATCTTTAATTGCTCTTGTTTTTATTAATAATTTTTGGTGAATTTCTCTGTGCTTTTTTCGTCTGCGGTTTCGCTTTTCTTTGATTTGAATGATTCTCTGTTCCATCGTCTTTTCATATTTATTTTCAAGTTTTTTTTTACGAAATTGTTTTCTTCAAAAAAATTGAACTCTGATTTTAGGAGATTTTTATTATCAAAATTACGATTGACTGCTGGAATGGTTGAAAATGAACTGTAAAAACAAAATGTTCTGGTTGAGTTCTGGCTTTCAATTTATGAATTTGAAATGTATGGAAATGTTAACTTGATTTCTCTCCGATGAACGAAACCTTATTTCTTTTTCAATATTTGACATTAAGTATAATTTTATTATCTTTAATTCTTGATAATCGATCTTTAATTTCTTTTAGTTATTATATTTATTTTAATAGGAAAAAATAATTAAAATCATTTATATGCAAGATGATTTTTTTTTTTTTTGTTTGATCAAGATTTTTTTAAAAAATTTAAAAAACAAAATTATTTATTTTTAAAATAACTTCAGACCAGTTACGTACTTCAATTTATTCTCTGATTTATTTTTTTTTTTTCTGAATTTCTACATTTACATTTAAACTGTTTATTTTGTTGTTTAACCAATTTCGCCACTGAAAATTAAACAAGATTTGTTAAGAGAAAATCAACTCCTTTTTTGTTCTTTAATTACAAAGGTTAAATTGAACATATATATTTTCCGTATTTATTATTATATTCTCTATCATTAAGAGATATTTTTAAATAATAATGGTAATAATGAACTAGTCTTCTGCTTTGTTTTTGTTTTTATTTTTACTCTCAAAAAAGTCATAATTAATTAATTCTTTAAATATTATATTTAACTTTTCCCTTTGCTTTGCATTCATCACCCATTGACCACAAAAAAAAAATACTAATTTTGGTAATTTAATTTTAATTTTTATAATTTTAGTTCATAACCTTTAATTTTTTTTAATCTGTTATGAACTTATATGCTTCCTGTTTTGATATTTTTATATTTGAATTGTGAATTTTAGTTTTTTTTCTTTCAATTTTCATTAGAATTTATATTGATTATGTATTTGGTGTCTAGATGATAGATGAGATTATGTCATATTTTATTTAAGAAATTAAACAATGGTTTATTTAAGTTTCATATTTAGAATTTTTAGTCAAATTTAAAACTTTTGTTTTAAAAATCAAATACCTTCTTTTGTTTTTTTGTTTTTTTGTTTTTTTCTGTTTTATAAATTTTTCTTAGATTTCTAGATTGGTTTTTTTAAAAAGTAAAAAGCAAAACAAAAAAACAAAAAAACTATATTTTTAATTGAAAAAATAAAAAAATAAAAAAATAATCTAATTATTAAAATCAATCTCTCAAATGTTTACATATATATAATGCTAATTCATATAGTTTCTTTACAATTTTATTTTATTTTTTTTAGTGAACATTAGATAAAAACCCTCTCAATTGCCGGTGGATTATTCTGTTTGTATTTTTTTTTTCGTATTCGTATTCATTAAATAAAACTCGTTTAAATTGATATGGAAACTTGTTTGATATATATATATATATATATATATACACACTTTTTTCGAGTGTTATTCTACGAATTATCAACACATCTACTCATAACTTTTAAAAATATATACAATATGATCGAGATGTATGGATATATTTTTAAAACAATTTTATGTCGTTTACTTGTAGAGGATTGCCACTGTCTCAAAACCAAGATCAAAATAGGAATTGGTGTCGTATGTACAATGAAAATATTCATTATGCTTACATAGAAGGAACTTTAGATCGAACAACAATTGATCTATATGAATTTCAGGAGAAAAGTAATGATGACAATAGTGATAACACCAAGGGTGAAGAGATTGACCACCATCGAGAGGTGATAAAGAATGATATTTTTGAAGATATCGTCAATGTTGTTGATTTGAAAGATATTATAACGCAATAA

mRNA sequence

ATGGATGAATACCTCAAGCAATCCAAGCGGAAATTAGTCATGTGGTTCACCAGAACCTTCAAGCCGATCATGACGCACGACGAGCTCGAACCTATTATGGCGACTCTAGGCTTTATCGGCCTCGAACCGGTTATTAACCGCGACGAAATCTCATGGAAATCATACGTATACTCCGGCGCTCATAGCCTGATCAAGTCAATGTCGACGACGGAGCGTCCGCCGATACCGCGATTGCCGTATCCGAGAGTCGACGGTCTTCACATTTATACGTACAGAGCATTTCTTGACGCAATCAATTTTTACCTCCAGAAATATAACATCTCCGATGTCTTCCATATTAGAGGATTGCCACTGTCTCAAAACCAAGATCAAAATAGGAATTGGTGTCGTATGTACAATGAAAATATTCATTATGCTTACATAGAAGGAACTTTAGATCGAACAACAATTGATCTATATGAATTTCAGGAGAAAAGTAATGATGACAATAGTGATAACACCAAGGGTGAAGAGATTGACCACCATCGAGAGGTGATAAAGAATGATATTTTTGAAGATATCGTCAATGTTGTTGATTTGAAAGATATTATAACGCAATAA

Coding sequence (CDS)

ATGGATGAATACCTCAAGCAATCCAAGCGGAAATTAGTCATGTGGTTCACCAGAACCTTCAAGCCGATCATGACGCACGACGAGCTCGAACCTATTATGGCGACTCTAGGCTTTATCGGCCTCGAACCGGTTATTAACCGCGACGAAATCTCATGGAAATCATACGTATACTCCGGCGCTCATAGCCTGATCAAGTCAATGTCGACGACGGAGCGTCCGCCGATACCGCGATTGCCGTATCCGAGAGTCGACGGTCTTCACATTTATACGTACAGAGCATTTCTTGACGCAATCAATTTTTACCTCCAGAAATATAACATCTCCGATGTCTTCCATATTAGAGGATTGCCACTGTCTCAAAACCAAGATCAAAATAGGAATTGGTGTCGTATGTACAATGAAAATATTCATTATGCTTACATAGAAGGAACTTTAGATCGAACAACAATTGATCTATATGAATTTCAGGAGAAAAGTAATGATGACAATAGTGATAACACCAAGGGTGAAGAGATTGACCACCATCGAGAGGTGATAAAGAATGATATTTTTGAAGATATCGTCAATGTTGTTGATTTGAAAGATATTATAACGCAATAA

Protein sequence

MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ

Homology

[Close]

BLAST of Carg18104 vs. NCBI nr
Match: XP_022928482.1 (uncharacterized protein LOC111435277 [Cucurbita moschata])

HSP 1 Score: 404.8 bits (1039), Expect = 1.7e-109
Identity = 197/199 (98.99%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGA 60
           MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVIN DEISWKSYVYSGA
Sbjct: 1   MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGA 60

Query: 61  HSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFHIRGLPLSQ 120
           HSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFHIRGLPLSQ
Sbjct: 61  HSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFHIRGLPLSQ 120

Query: 121 NQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIK 180
           NQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTK EEIDHHREVIK
Sbjct: 121 NQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIK 180

Query: 181 NDIFEDIVNVVDLKDIITQ 200
           NDIFEDIVNVVDLKDIITQ
Sbjct: 181 NDIFEDIVNVVDLKDIITQ 199

[Close]

BLAST of Carg18104 vs. NCBI nr
Match: XP_023529793.1 (uncharacterized protein LOC111792510 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 401.4 bits (1030), Expect = 1.8e-108
Identity = 194/199 (97.49%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGA 60
           MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGA
Sbjct: 1   MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGA 60

Query: 61  HSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFHIRGLPLSQ 120
           HSLIKS+STTERPP+PRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFH+RGLPLSQ
Sbjct: 61  HSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFHVRGLPLSQ 120

Query: 121 NQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIK 180
           NQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTK EEIDH REVIK
Sbjct: 121 NQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIK 180

Query: 181 NDIFEDIVNVVDLKDIITQ 200
           NDIFEDIVNVVDLKDIITQ
Sbjct: 181 NDIFEDIVNVVDLKDIITQ 199

[Close]

BLAST of Carg18104 vs. NCBI nr
Match: XP_022989470.1 (uncharacterized protein LOC111486519 isoform X1 [Cucurbita maxima])

HSP 1 Score: 347.1 bits (889), Expect = 4.1e-92
Identity = 173/203 (85.22%), Postives = 177/203 (87.19%), Query Frame = 0


Query: 1   MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGA 60
           MDEYLKQSKRKLVMWFT+TFKPIMTHDELEPIMATLGF+GLEPVINRDEISWKSYVYSGA
Sbjct: 1   MDEYLKQSKRKLVMWFTKTFKPIMTHDELEPIMATLGFVGLEPVINRDEISWKSYVYSGA 60

Query: 61  HSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFHIRGLPLSQ 120
           HSLIKSMSTTERPPIPRLPYPR+DGLHIYTYRAFLDAINFYLQKYNISDVFHIRGLPLSQ
Sbjct: 61  HSLIKSMSTTERPPIPRLPYPRIDGLHIYTYRAFLDAINFYLQKYNISDVFHIRGLPLSQ 120

Query: 121 NQ----DQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHR 180
           NQ         WCRMY ENIHYAYIEGTLDRTTIDLYE QE               DHH+
Sbjct: 121 NQXXXXXXXXXWCRMYKENIHYAYIEGTLDRTTIDLYESQEXXXXXXXXXXXXXXXDHHK 180

Query: 181 EVIKNDIFEDIVNVVDLKDIITQ 200
           EVIKNDIFEDIVNVVDLKDIITQ
Sbjct: 181 EVIKNDIFEDIVNVVDLKDIITQ 203

[Close]

BLAST of Carg18104 vs. NCBI nr
Match: XP_022989471.1 (uncharacterized protein LOC111486519 isoform X2 [Cucurbita maxima])

HSP 1 Score: 236.1 bits (601), Expect = 1.0e-58
Identity = 110/113 (97.35%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGA 60
           MDEYLKQSKRKLVMWFT+TFKPIMTHDELEPIMATLGF+GLEPVINRDEISWKSYVYSGA
Sbjct: 1   MDEYLKQSKRKLVMWFTKTFKPIMTHDELEPIMATLGFVGLEPVINRDEISWKSYVYSGA 60

Query: 61  HSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFHI 114
           HSLIKSMSTTERPPIPRLPYPR+DGLHIYTYRAFLDAINFYLQKYNISDVFHI
Sbjct: 61  HSLIKSMSTTERPPIPRLPYPRIDGLHIYTYRAFLDAINFYLQKYNISDVFHI 113

[Close]

BLAST of Carg18104 vs. NCBI nr
Match: XP_004144902.1 (PREDICTED: uncharacterized protein LOC101221709 [Cucumis sativus] >KGN43367.1 hypothetical protein Csa_7G027830 [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 6.6e-58
Identity = 117/204 (57.35%), Postives = 148/204 (72.55%), Query Frame = 0


Query: 1   MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGA 60
           M++ L++S RKL +WFT+TFKPIMTHDELEPIMATLGFI LEP +N   ISWKSY YS A
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60

Query: 61  HSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFHIRGLPLSQ 120
               KS+S +  PP PRLPYPR+DGLHIYTYRAFLDA+NFYL+K++ISD+FHIRGLPL +
Sbjct: 61  DCRTKSVSPS--PPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYR 120

Query: 121 NQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDN------SDNTKGEEIDH 180
           N D+NR W RM  E  ++ Y EGTLD+TT+ LY F + +N +N         T  EE + 
Sbjct: 121 NHDRNRKWRRMDEEGGNFVYREGTLDQTTLSLYNFHKVNNQNNKRYKKYDSITNDEENND 180

Query: 181 HREVIKNDIFEDIVNVVDLKDIIT 199
              + ++   ED + +V LKD+IT
Sbjct: 181 RSRMTEDSTEEDSICIVSLKDVIT 202

[Close]

BLAST of Carg18104 vs. TrEMBL
Match: tr|A0A0A0K4Z6|A0A0A0K4Z6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027830 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.4e-58
Identity = 117/204 (57.35%), Postives = 148/204 (72.55%), Query Frame = 0


Query: 1   MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGA 60
           M++ L++S RKL +WFT+TFKPIMTHDELEPIMATLGFI LEP +N   ISWKSY YS A
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60

Query: 61  HSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFHIRGLPLSQ 120
               KS+S +  PP PRLPYPR+DGLHIYTYRAFLDA+NFYL+K++ISD+FHIRGLPL +
Sbjct: 61  DCRTKSVSPS--PPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYR 120

Query: 121 NQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDN------SDNTKGEEIDH 180
           N D+NR W RM  E  ++ Y EGTLD+TT+ LY F + +N +N         T  EE + 
Sbjct: 121 NHDRNRKWRRMDEEGGNFVYREGTLDQTTLSLYNFHKVNNQNNKRYKKYDSITNDEENND 180

Query: 181 HREVIKNDIFEDIVNVVDLKDIIT 199
              + ++   ED + +V LKD+IT
Sbjct: 181 RSRMTEDSTEEDSICIVSLKDVIT 202

[Close]

BLAST of Carg18104 vs. TrEMBL
Match: tr|A0A1S3BQB8|A0A1S3BQB8_CUCME (uncharacterized protein LOC103492564 OS=Cucumis melo OX=3656 GN=LOC103492564 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 7.7e-55
Identity = 113/212 (53.30%), Postives = 147/212 (69.34%), Query Frame = 0


Query: 1   MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGA 60
           M++ L++S RKL +WFT+TFKPIMTHDELEPIMATLGFI LEP +N   ISWKSY Y+ A
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYTAA 60

Query: 61  HSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFHIRGLPLSQ 120
               ++ S +  PP PRLPYPR+DGLHIYTYRAFLDA+NFYL+K++ISD+FHIRGLPL +
Sbjct: 61  D--CRTTSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYR 120

Query: 121 NQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYE--------------FQEKSNDDNSDN 180
           N D+NR W RM  E  ++ Y EGTLD+TT++LY                   + D+ ++N
Sbjct: 121 NHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNXXXXXXXXXXXXXXXNSITKDEENNN 180

Query: 181 TKGEEIDHHREVIKNDIFEDIVNVVDLKDIIT 199
            +G+ ID   +       ED + +V LKD+IT
Sbjct: 181 DRGKMIDDSTD-------EDSICIVSLKDVIT 203

[Close]

BLAST of Carg18104 vs. TrEMBL
Match: tr|A0A2N9EIV4|A0A2N9EIV4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6739 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47
Identity = 95/175 (54.29%), Postives = 121/175 (69.14%), Query Frame = 0


Query: 1   MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDE------ISWKS 60
           M+E +++  +KL +WFT TFKPIMTHDELEPIMATLGF+GL P  +         + WK 
Sbjct: 1   MEECMRECMKKLALWFTNTFKPIMTHDELEPIMATLGFVGLPPSPSPPSSNGGAGVPWKE 60

Query: 61  YVYSG-----AHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISD 120
           YVYS      +  +I S+ TT  PP PRLPYPR+DGLHIYTYRAF+DA+NFYL    ISD
Sbjct: 61  YVYSAGGWQRSKWIISSVETTTSPPKPRLPYPRIDGLHIYTYRAFIDAVNFYLDMSEISD 120

Query: 121 VFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNS 165
           +FHIRG+PL +  D+NR W RM  +   + Y EGTLD+ T +LY F + S+ +NS
Sbjct: 121 LFHIRGMPLHREHDRNRKWRRMEEDESVFVYREGTLDQATYNLYHFDKNSSTNNS 175

[Close]

BLAST of Carg18104 vs. TrEMBL
Match: tr|W9QLL3|W9QLL3_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013738 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.7e-46
Identity = 92/164 (56.10%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 1   MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEIS-WKSYVYSG 60
           M+EY+K+  RKL MW+TRTFKPIMTHDELEPIMATLGF+GL P         WK YV+S 
Sbjct: 1   MEEYMKECMRKLAMWYTRTFKPIMTHDELEPIMATLGFVGLPPTTTAAHGGPWKEYVFSA 60

Query: 61  AHSLIKS---MSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFHIRGL 120
                 S    S  E  P PRLPYPR+DGLHIYTYRAF+DA+NFYL+  + SD+FHIRG+
Sbjct: 61  GQWRANSSSGSSVAEAQPRPRLPYPRIDGLHIYTYRAFIDAVNFYLEMCDFSDLFHIRGM 120

Query: 121 PLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSN 161
           PL +  D+NR W RM  ++  + Y EGTLD++T + Y F + +N
Sbjct: 121 PLHRAHDRNRKWRRMEEDDSVFVYREGTLDQSTYNFYHFDKNNN 164

[Close]

BLAST of Carg18104 vs. TrEMBL
Match: tr|A0A2P5BHT1|A0A2P5BHT1_9ROSA (Tubulin-tyrosine ligase OS=Trema orientalis OX=63057 GN=TorRG33x02_320670 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.0e-46
Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 1   MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGA 60
           M+EY+K+  RKL +W TRTFKPIMTHDELEPIMATLGF+GL P        WK YV S  
Sbjct: 1   MEEYMKECMRKLALWHTRTFKPIMTHDELEPIMATLGFVGLPPTTTSSGGVWKEYVCSAG 60

Query: 61  HSLIKSMSTTERPPIPR--LPYPRVDGLHIYTYRAFLDAINFYLQKYNISDVFHIRGLPL 120
             +  S  +   PP PR  LPYPRVDGLHIYTYRAF+DA+NFYL+  + SD+FH+RG+PL
Sbjct: 61  RWVANSGFSAAEPPPPRPKLPYPRVDGLHIYTYRAFIDAVNFYLEMGDFSDLFHVRGMPL 120

Query: 121 SQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDN 167
            +  D++R W RM  ++  + Y EGTLD+ T +LY F + S+++   N
Sbjct: 121 HRAHDRSRKWRRMEEDDSVFVYREGTLDQATYNLYHFDKNSSNNGGSN 168

The following BLAST results are available for this feature:

BLAST of Carg18104 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928482.1	1.7e-109	98.99	uncharacterized protein LOC111435277 [Cucurbita moschata]	[more]
XP_023529793.1	1.8e-108	97.49	uncharacterized protein LOC111792510 [Cucurbita pepo subsp. pepo]	[more]
XP_022989470.1	4.1e-92	85.22	uncharacterized protein LOC111486519 isoform X1 [Cucurbita maxima]	[more]
XP_022989471.1	1.0e-58	97.35	uncharacterized protein LOC111486519 isoform X2 [Cucurbita maxima]	[more]
XP_004144902.1	6.6e-58	57.35	PREDICTED: uncharacterized protein LOC101221709 [Cucumis sativus] >KGN43367.1 hy...	[more]

BLAST of Carg18104 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg18104 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg18104 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K4Z6\|A0A0A0K4Z6_CUCSA	4.4e-58	57.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027830 PE=4 SV=1	[more]
tr\|A0A1S3BQB8\|A0A1S3BQB8_CUCME	7.7e-55	53.30	uncharacterized protein LOC103492564 OS=Cucumis melo OX=3656 GN=LOC103492564 PE=...	[more]
tr\|A0A2N9EIV4\|A0A2N9EIV4_FAGSY	1.6e-47	54.29	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6739 PE=4 SV=1	[more]
tr\|W9QLL3\|W9QLL3_9ROSA	1.7e-46	56.10	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013738 PE=4 SV=1	[more]
tr\|A0A2P5BHT1\|A0A2P5BHT1_9ROSA	5.0e-46	54.17	Tubulin-tyrosine ligase OS=Trema orientalis OX=63057 GN=TorRG33x02_320670 PE=4 S...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18104-RA	Carg18104-RA	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18104	Cla015728	Watermelon (97103) v1	carwmB1066
Carg18104	Csa7G027830	Cucumber (Chinese Long) v2	carcuB1081
Carg18104	MELO3C015697	Melon (DHL92) v3.5.1	carmeB1034
Carg18104	ClCG02G003270	Watermelon (Charleston Gray)	carwcgB1037
Carg18104	CSPI07G02250	Wild cucumber (PI 183967)	carcpiB1103
Carg18104	Cucsa.099890	Cucumber (Gy14) v1	carcgyB1183
Carg18104	CmaCh19G008110	Cucurbita maxima (Rimu)	carcmaB1474
Carg18104	CmaCh11G013210	Cucurbita maxima (Rimu)	carcmaB1471
Carg18104	CmoCh19G008320	Cucurbita moschata (Rifu)	carcmoB1430
Carg18104	CmoCh11G018000	Cucurbita moschata (Rifu)	carcmoB1428
Carg18104	Lsi11G013050	Bottle gourd (USVL1VR-Ls)	carlsiB974
Carg18104	Cp4.1LG15g06470	Cucurbita pepo (Zucchini)	carcpeB1481
Carg18104	Cp4.1LG04g04410	Cucurbita pepo (Zucchini)	carcpeB1483
Carg18104	CsGy7G001970	Cucumber (Gy14) v2	carcgybB1049
Carg18104	MELO3C015697.2	Melon (DHL92) v3.6.1	carmedB1048
Carg18104	CsaV3_7G002100	Cucumber (Chinese Long) v3	carcucB1114
Carg18104	Cla97C02G029810	Watermelon (97103) v2	carwmbB1124
Carg18104	Bhi05G001338	Wax gourd	carwgoB1253

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg18104	Carg04111	Silver-seed gourd	carcarB242

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18104	Silver-seed gourd	carcarB378
Carg18104	Silver-seed gourd	carcarB631
Carg18104	Cucumber (Gy14) v2	carcgybB1047
Carg18104	Cucumber (Gy14) v1	carcgyB1184
Carg18104	Cucurbita maxima (Rimu)	carcmaB1475
Carg18104	Cucurbita moschata (Rifu)	carcmoB1431
Carg18104	Cucurbita pepo (Zucchini)	carcpeB1482
Carg18104	Cucumber (Chinese Long) v2	carcuB1079
Carg18104	Cucumber (Chinese Long) v3	carcucB1112
Carg18104	Bottle gourd (USVL1VR-Ls)	carlsiB972
Carg18104	Melon (DHL92) v3.5.1	carmeB1032
Carg18104	Melon (DHL92) v3.6.1	carmedB1046