Carg04111 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04111
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Tubulin-tyrosine ligase
Location	Cucurbita_argyrosperma_scaffold_044 : 229351 .. 232457 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGACTGCCTGAGGGAGTCCATGCGAAAATTAGCCCTCTGGTTAACCAAAACCTTCAAGCCAATCATGACGCATGACGAGCTCGAACCTATTATGGTCACTCTAGGCTTTATCGCCTTGGAACCGGCCGTCAACGGCGCCGGAATCTCCTGGAAATCCTACAAATACTCCGCCGCAGATTGCCGTACTAAGTCTGTTTCTCCGCCGCCGCCAATACCGCGACTGCCGTATCCGAGGATCGACGGTCTTCATATTTATACGTACAGAGCATTTCTCGATGCCGTCAATTTTTATCTCGAGAAATTTGATATCTCCGATCTCTTCCATATTAGGTAACAATGTTGTTTAATCCTTTTAATTTTTGTGCTTTTTCTTTAATTTTGGTTGAAAATTTCTCTGTGCTTTTTTCGCTGCTGTTTCGCTTTTCGTTGATTTTGAACGTTTCATCATCCACCGCCTTTTCATTTATTTTCAAGTTTTATGACGAAATTGATTGCTCTTTTCTAAAATTTCAACTCTGATTTTAGGAGATTTCTTGTCATAGTTACGGTTGACTACTGGTTTGATCGAGAATGAACTGAAAAATCATAATATTTTGATTCAGTTTTTTTTCCTTCAAATTCTTTTAACGAATGAATTTCAACTTGATTCGTCTCTGATGATTGACAGTCCTTCTTCCTTCTTCTTCTTTTTCCTTTTCAATATCGTAACATTAAGCAAAATTTTCTTCTTATCGATTAGATGAAAATCTTTGATTCCTTCTAATTTATCTTTAATTATTTTTTGTTACTATATTTATTTCAATTACGAAAATAAAAAAATTAATATATGTAAAATTAGTTATTATTTTCTTAGATGGTAAAGCTATTAAGGCTATTCCCTTTCTCCCAAGTATGAAAAGTCAATTTTGGACAATATTTTCTTTTTATATATTACTCTTACCTGTATATATATATATATATATATATATATATATATATATCCATATTGACTAGTATTTTAATTTGCAATATTACTTCAAATTAATTTCTGCTTAAATATTTAATTGAGTTTTATTAAGACATTTTATTTGATTTTCCTATTTTAATTTTTTTAAAAAAGTTTTCTTTTAACTTTCTAAAATTGCTTCTAAAATATAAATTTTGAGAAAACAATTAAAATTATTTATTTATTTATTTATTTTAAAGCTAATTGAAAAGATTATTATCGTAAAAATTAATATTGTAGGGAAGAATTTTAGATTTTAAATCTTAATTCTTTTTTTTTTTTAATCTTTTATTTTTAATTATGTTCAGTTACATAATTTAAATTTAATATCTTTTTTCTTTTTTCTGATTTTTTACAATTACTATTTTTTAAATTTTGAACAATTACTACTATTTAAATTTAATATCTTTAATCCAACAATAGGATTTGTTATTTAACTAAATTCGCTGCTGAAAAGGAAACAGGATTTATTTACTTTTTACTTTTTGAGAACGGGAAATATTTATTTATTTATTTATTTTATTTATTATTCTGTATTTGTTGTTTTTTTTAATTAATTAATTTTTATAAGATTATATTTAAGTATTGGACAGCACGAAACTCCACGCCTGCATGTAGATGAAGTGCAGGCAGAGGCAATAATACTGTAAATTTCACATGCTTTTTGCATTTATCACCTAACACATGATCACCAACAAAAAAAAAAAAAGAAAAAAAAAAGTTATCTAATTTTTATAAAGTTCATGAACTTTTTTTTTTTATTATTTTTTTTTATTTTTAATTTTTAAATTTTATTCTTGAACTTTAATGCTTTCTGTTTTGATCTTTTAACTTATCCAAATTTAATTAAATTTTTAAAATTTTTAATAGTCAATTTTGGTTTTTTATTTTCATTAAATTTCATATTTATATCTCTTATCGTGTTTTTTTTTTTTTTTTTTAAATAGTCAATCGTGTTTCATAAATTAGATAGTTTTTTTTCCCTAAAGTAAGGATTAAAGTTTAAAAAAATGTTTGATGATGATTTCAGTTTTTTGTTTTATTGTTAGCTTCCTCAATCATTATGCTTTTGGTGAGTTTTTCACATTTCTTAAGAACATTTTTGAATTTTTAATTAAATTTCAAAATTTTTGGAATTAAATGTTTTATAAACTAAAATTAAATCTAGGGATAAAATTTACCTTTAAATCTAAGTACAAAAACTAATTTATGTAACTTAGCATCATTATAATTTAAGTTTCCTTATAATCAAATTAATTTCTTTTTTCTATTATATTTATGATTCTATTGGTAACAATTCTTTTCTTCGTATATATTTTAAAGTTATTTTTATAAATAACTCTATAATTATTCTCAAAAGTTATTCCAAACACTCTATTATCATCTATTTTTTAAAAATAAATTTAAATTTGTTAATTTAGTATTTTTTTTAATGTATAACTTGAATTTTTTTGTACTGTATTCCTAAAATTCTTTGTTTGAGATTCTGTTCATGATGCGTGTGTAAAGTGTTTTTTTCCTTTGTAAATTGTGAATCTAAATATGAAAACAAATTAATGTTTCCTTTTATTTGCAGAGGATTGCCATTGTATCGAAACCATGATCGAAATAGAAAGTGGCGTCGAATAGACGAAGAAGGAGGTAATTTTGTTTATAGAGAAGGGACTCTAGATCAAACAACACTCAATTTGTATAACTTTCATAAGACTTGGCCGAATAACAAGAGATACAAAAAGAATGAGAGTAGTTCCAGTACCAGCGACGAAGAAAATGATGATTCTAGTAAAAAAATTGAAGATCCCATCTGCGTTGTTAGTTTGAAAGATGTAATAACATAACGAAACGGTGCAACTCAATATCAATCGACACATGAAGAAGAACAATTTTGGTAAGTTTTCCCGTAGCTCATCCCGAAGATGATGTATTCCTTAATTTATTTGATGTCTTGAGGGATTAGAGGTTCTAGTGTACACATGAACAAATTTTGCACAATGGAAGATGAAATAGTAGCTTTAGTGAATGAATTTTGATGTGGACATTATCCTAAGCATTCATCAGAATAGTATGGAAAATGGGCCATTGATGTTCTGTAAGCCCACACAATTTTCAGGCTCTCC

mRNA sequence

ATGGAGGACTGCCTGAGGGAGTCCATGCGAAAATTAGCCCTCTGGTTAACCAAAACCTTCAAGCCAATCATGACGCATGACGAGCTCGAACCTATTATGGTCACTCTAGGCTTTATCGCCTTGGAACCGGCCGTCAACGGCGCCGGAATCTCCTGGAAATCCTACAAATACTCCGCCGCAGATTGCCGTACTAAGTCTGTTTCTCCGCCGCCGCCAATACCGCGACTGCCGTATCCGAGGATCGACGGTCTTCATATTTATACGTACAGAGCATTTCTCGATGCCGTCAATTTTTATCTCGAGAAATTTGATATCTCCGATCTCTTCCATATTAGAGGATTGCCATTGTATCGAAACCATGATCGAAATAGAAAGTGGCGTCGAATAGACGAAGAAGGAGGTAATTTTGTTTATAGAGAAGGGACTCTAGATCAAACAACACTCAATTTGTATAACTTTCATAAGACTTGGCCGAATAACAAGAGATACAAAAAGAATGAGAGTAGTTCCAGTACCAGCGACGAAGAAAATGATGATTCTAGTAAAAAAATTGAAGATCCCATCTGCGTTGTTAGTTTGAAAGATGTAATAACATAACGAAACGGTGCAACTCAATATCAATCGACACATGAAGAAGAACAATTTTGGTAAGTTTTCCCGTAGCTCATCCCGAAGATGATGTATTCCTTAATTTATTTGATGTCTTGAGGGATTAGAGGTTCTAGTGTACACATGAACAAATTTTGCACAATGGAAGATGAAATAGTAGCTTTAGTGAATGAATTTTGATGTGGACATTATCCTAAGCATTCATCAGAATAGTATGGAAAATGGGCCATTGATGTTCTGTAAGCCCACACAATTTTCAGGCTCTCC

Coding sequence (CDS)

ATGGAGGACTGCCTGAGGGAGTCCATGCGAAAATTAGCCCTCTGGTTAACCAAAACCTTCAAGCCAATCATGACGCATGACGAGCTCGAACCTATTATGGTCACTCTAGGCTTTATCGCCTTGGAACCGGCCGTCAACGGCGCCGGAATCTCCTGGAAATCCTACAAATACTCCGCCGCAGATTGCCGTACTAAGTCTGTTTCTCCGCCGCCGCCAATACCGCGACTGCCGTATCCGAGGATCGACGGTCTTCATATTTATACGTACAGAGCATTTCTCGATGCCGTCAATTTTTATCTCGAGAAATTTGATATCTCCGATCTCTTCCATATTAGAGGATTGCCATTGTATCGAAACCATGATCGAAATAGAAAGTGGCGTCGAATAGACGAAGAAGGAGGTAATTTTGTTTATAGAGAAGGGACTCTAGATCAAACAACACTCAATTTGTATAACTTTCATAAGACTTGGCCGAATAACAAGAGATACAAAAAGAATGAGAGTAGTTCCAGTACCAGCGACGAAGAAAATGATGATTCTAGTAAAAAAATTGAAGATCCCATCTGCGTTGTTAGTTTGAAAGATGTAATAACATAA

Protein sequence

MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNHDRNRKWRRIDEEGGNFVYREGTLDQTTLNLYNFHKTWPNNKRYKKNESSSSTSDEENDDSSKKIEDPICVVSLKDVIT

Homology

[Close]

BLAST of Carg04111 vs. NCBI nr
Match: XP_022952714.1 (uncharacterized protein LOC111455327 [Cucurbita moschata])

HSP 1 Score: 358.6 bits (919), Expect = 1.4e-95
Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA
Sbjct: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60

Query: 61  DCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120
           DCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH
Sbjct: 61  DCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120

Query: 121 DRNRKWRRIDEEGGNFVYREGTLDQTTLNLYNFHKTWPNXXXXXXXXXXXXXXXXXXXXX 180
           DRNRKWRR+DEEGGNFVYREGTLDQTTLNLYNFHKTWPN XXXXXXXXXXXXXXXXXXXX
Sbjct: 121 DRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKTWPNNXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXIEDPICVVSLKDVIT 199
           XXXIEDPICVVSLKDVIT
Sbjct: 181 XXXIEDPICVVSLKDVIT 198

[Close]

BLAST of Carg04111 vs. NCBI nr
Match: XP_023554620.1 (uncharacterized protein LOC111811813 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355.9 bits (912), Expect = 8.8e-95
Identity = 193/198 (97.47%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA
Sbjct: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60

Query: 61  DCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120
           DCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH
Sbjct: 61  DCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120

Query: 121 DRNRKWRRIDEEGGNFVYREGTLDQTTLNLYNFHKTWPNXXXXXXXXXXXXXXXXXXXXX 180
           DRNRKWRR+DEEGGNFVYREGTLDQTTLN YNFHKTWPN  XXXXXXXXXXXXXXXXXXX
Sbjct: 121 DRNRKWRRMDEEGGNFVYREGTLDQTTLNRYNFHKTWPNNKXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXIEDPICVVSLKDVIT 199
           XXXIEDPIC+VSLKDVIT
Sbjct: 181 XXXIEDPICIVSLKDVIT 198

[Close]

BLAST of Carg04111 vs. NCBI nr
Match: XP_022969263.1 (uncharacterized protein LOC111468318 [Cucurbita maxima])

HSP 1 Score: 350.5 bits (898), Expect = 3.7e-93
Identity = 193/198 (97.47%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA
Sbjct: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60

Query: 61  DCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120
           D RTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH
Sbjct: 61  DFRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120

Query: 121 DRNRKWRRIDEEGGNFVYREGTLDQTTLNLYNFHKTWPNXXXXXXXXXXXXXXXXXXXXX 180
           DRNRKWRR+DEEGGNFVYREGTLDQTTLNLYNFHKTWPNXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 DRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKTWPNXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXIEDPICVVSLKDVIT 199
           XXX E+PIC+VSLKDVIT
Sbjct: 181 XXXXEEPICIVSLKDVIT 198

[Close]

BLAST of Carg04111 vs. NCBI nr
Match: XP_004144902.1 (PREDICTED: uncharacterized protein LOC101221709 [Cucumis sativus] >KGN43367.1 hypothetical protein Csa_7G027830 [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 1.1e-84
Identity = 160/202 (79.21%), Postives = 164/202 (81.19%), Query Frame = 0


Query: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLA+W TKTFKPIMTHDELEPIM TLGFIALEPAVNGAGISWKSYKYSAA
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60

Query: 61  DCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120
           DCRTKSVSP PP PRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH
Sbjct: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120

Query: 121 DRNRKWRRIDEEGGNFVYREGTLDQTTLNLYNFHK----TWPNXXXXXXXXXXXXXXXXX 180
           DRNRKWRR+DEEGGNFVYREGTLDQTTL+LYNFHK                         
Sbjct: 121 DRNRKWRRMDEEGGNFVYREGTLDQTTLSLYNFHKVNNQNNKRYKKYDSITNDEENNDRS 180

Query: 181 XXXXXXXIEDPICVVSLKDVIT 199
                   ED IC+VSLKDVIT
Sbjct: 181 RMTEDSTEEDSICIVSLKDVIT 202

[Close]

BLAST of Carg04111 vs. NCBI nr
Match: XP_008451192.1 (PREDICTED: uncharacterized protein LOC103492564 [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 1.7e-82
Identity = 165/203 (81.28%), Postives = 169/203 (83.25%), Query Frame = 0


Query: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLA+W TKTFKPIMTHDELEPIM TLGFIALEPAVNGAGISWKSYKY+AA
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYTAA 60

Query: 61  DCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120
           DCRT SVSP PP PRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH
Sbjct: 61  DCRTTSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120

Query: 121 DRNRKWRRIDEEGGNFVYREGTLDQTTLNLYNFHKTWPNXXXXXXXXXXXXXXXXXXXXX 180
           DRNRKWRR+DEEGGNFVYREGTLDQTTLNLYN       XXXXXXXX             
Sbjct: 121 DRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNXXXXXXXXXXXXXXXNSITKDEENNNDR 180

Query: 181 XXXI-----EDPICVVSLKDVIT 199
              I     ED IC+VSLKDVIT
Sbjct: 181 GKMIDDSTDEDSICIVSLKDVIT 203

[Close]

BLAST of Carg04111 vs. TrEMBL
Match: tr|A0A0A0K4Z6|A0A0A0K4Z6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027830 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 7.1e-85
Identity = 160/202 (79.21%), Postives = 164/202 (81.19%), Query Frame = 0


Query: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLA+W TKTFKPIMTHDELEPIM TLGFIALEPAVNGAGISWKSYKYSAA
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAA 60

Query: 61  DCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120
           DCRTKSVSP PP PRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH
Sbjct: 61  DCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120

Query: 121 DRNRKWRRIDEEGGNFVYREGTLDQTTLNLYNFHK----TWPNXXXXXXXXXXXXXXXXX 180
           DRNRKWRR+DEEGGNFVYREGTLDQTTL+LYNFHK                         
Sbjct: 121 DRNRKWRRMDEEGGNFVYREGTLDQTTLSLYNFHKVNNQNNKRYKKYDSITNDEENNDRS 180

Query: 181 XXXXXXXIEDPICVVSLKDVIT 199
                   ED IC+VSLKDVIT
Sbjct: 181 RMTEDSTEEDSICIVSLKDVIT 202

[Close]

BLAST of Carg04111 vs. TrEMBL
Match: tr|A0A1S3BQB8|A0A1S3BQB8_CUCME (uncharacterized protein LOC103492564 OS=Cucumis melo OX=3656 GN=LOC103492564 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.1e-82
Identity = 165/203 (81.28%), Postives = 169/203 (83.25%), Query Frame = 0


Query: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDCLRESMRKLA+W TKTFKPIMTHDELEPIM TLGFIALEPAVNGAGISWKSYKY+AA
Sbjct: 1   MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYTAA 60

Query: 61  DCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120
           DCRT SVSP PP PRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH
Sbjct: 61  DCRTTSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPLYRNH 120

Query: 121 DRNRKWRRIDEEGGNFVYREGTLDQTTLNLYNFHKTWPNXXXXXXXXXXXXXXXXXXXXX 180
           DRNRKWRR+DEEGGNFVYREGTLDQTTLNLYN       XXXXXXXX             
Sbjct: 121 DRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNXXXXXXXXXXXXXXXNSITKDEENNNDR 180

Query: 181 XXXI-----EDPICVVSLKDVIT 199
              I     ED IC+VSLKDVIT
Sbjct: 181 GKMIDDSTDEDSICIVSLKDVIT 203

[Close]

BLAST of Carg04111 vs. TrEMBL
Match: tr|A0A2N9EIV4|A0A2N9EIV4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6739 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.3e-56
Identity = 108/168 (64.29%), Postives = 127/168 (75.60%), Query Frame = 0


Query: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVN------GAGISWKS 60
           ME+C+RE M+KLALW T TFKPIMTHDELEPIM TLGF+ L P+ +      GAG+ WK 
Sbjct: 1   MEECMRECMKKLALWFTNTFKPIMTHDELEPIMATLGFVGLPPSPSPPSSNGGAGVPWKE 60

Query: 61  YKYSAADCR-------TKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISD 120
           Y YSA   +       +   +  PP PRLPYPRIDGLHIYTYRAF+DAVNFYL+  +ISD
Sbjct: 61  YVYSAGGWQRSKWIISSVETTTSPPKPRLPYPRIDGLHIYTYRAFIDAVNFYLDMSEISD 120

Query: 121 LFHIRGLPLYRNHDRNRKWRRIDEEGGNFVYREGTLDQTTLNLYNFHK 156
           LFHIRG+PL+R HDRNRKWRR++E+   FVYREGTLDQ T NLY+F K
Sbjct: 121 LFHIRGMPLHREHDRNRKWRRMEEDESVFVYREGTLDQATYNLYHFDK 168

[Close]

BLAST of Carg04111 vs. TrEMBL
Match: tr|A0A061E9H0|A0A061E9H0_THECC (Serine/threonine-protein kinase pakG OS=Theobroma cacao OX=3641 GN=TCM_007595 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.0e-55
Identity = 107/170 (62.94%), Postives = 129/170 (75.88%), Query Frame = 0


Query: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSAA 60
           MEDC+R  MRKLALW TKTFKP+MTHDELEPIM T+GF+ L P    + ++WK Y ++A+
Sbjct: 1   MEDCMRVCMRKLALWFTKTFKPLMTHDELEPIMATMGFVGLPPVQGTSAVAWKEYVHTAS 60

Query: 61  ---DCRTKS------------VSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDI 120
                R+KS             + PPP PRLPYPRIDGLHIYTYRAF+DAVNFYLE  DI
Sbjct: 61  PGLSWRSKSSYCLRSTAGESPTTTPPPRPRLPYPRIDGLHIYTYRAFIDAVNFYLEMCDI 120

Query: 121 SDLFHIRGLPLYRNHDRNRKWRRIDEEGGNFVYREGTLDQTTLNLYNFHK 156
           S+LFHIRG+PL+R HDRNRKWR ++E+   FVYREGTL+QTT NLY+F+K
Sbjct: 121 SELFHIRGMPLHRIHDRNRKWRCMEEDDSVFVYREGTLEQTTYNLYHFNK 170

[Close]

BLAST of Carg04111 vs. TrEMBL
Match: tr|A0A2P5BHT1|A0A2P5BHT1_9ROSA (Tubulin-tyrosine ligase OS=Trema orientalis OX=63057 GN=TorRG33x02_320670 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.4e-55
Identity = 105/163 (64.42%), Postives = 124/163 (76.07%), Query Frame = 0


Query: 1   MEDCLRESMRKLALWLTKTFKPIMTHDELEPIMVTLGFIALEPAVNGAGISWKSYKYSA- 60
           ME+ ++E MRKLALW T+TFKPIMTHDELEPIM TLGF+ L P    +G  WK Y  SA 
Sbjct: 1   MEEYMKECMRKLALWHTRTFKPIMTHDELEPIMATLGFVGLPPTTTSSGGVWKEYVCSAG 60

Query: 61  ---ADCRTKSVSPPPPIPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFHIRGLPL 120
              A+    +  PPPP P+LPYPR+DGLHIYTYRAF+DAVNFYLE  D SDLFH+RG+PL
Sbjct: 61  RWVANSGFSAAEPPPPRPKLPYPRVDGLHIYTYRAFIDAVNFYLEMGDFSDLFHVRGMPL 120

Query: 121 YRNHDRNRKWRRIDEEGGNFVYREGTLDQTTLNLYNFHKTWPN 160
           +R HDR+RKWRR++E+   FVYREGTLDQ T NLY+F K   N
Sbjct: 121 HRAHDRSRKWRRMEEDDSVFVYREGTLDQATYNLYHFDKNSSN 163

The following BLAST results are available for this feature:

BLAST of Carg04111 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952714.1	1.4e-95	98.99	uncharacterized protein LOC111455327 [Cucurbita moschata]	[more]
XP_023554620.1	8.8e-95	97.47	uncharacterized protein LOC111811813 [Cucurbita pepo subsp. pepo]	[more]
XP_022969263.1	3.7e-93	97.47	uncharacterized protein LOC111468318 [Cucurbita maxima]	[more]
XP_004144902.1	1.1e-84	79.21	PREDICTED: uncharacterized protein LOC101221709 [Cucumis sativus] >KGN43367.1 hy...	[more]
XP_008451192.1	1.7e-82	81.28	PREDICTED: uncharacterized protein LOC103492564 [Cucumis melo]	[more]

BLAST of Carg04111 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg04111 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg04111 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K4Z6\|A0A0A0K4Z6_CUCSA	7.1e-85	79.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027830 PE=4 SV=1	[more]
tr\|A0A1S3BQB8\|A0A1S3BQB8_CUCME	1.1e-82	81.28	uncharacterized protein LOC103492564 OS=Cucumis melo OX=3656 GN=LOC103492564 PE=...	[more]
tr\|A0A2N9EIV4\|A0A2N9EIV4_FAGSY	5.3e-56	64.29	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6739 PE=4 SV=1	[more]
tr\|A0A061E9H0\|A0A061E9H0_THECC	2.0e-55	62.94	Serine/threonine-protein kinase pakG OS=Theobroma cacao OX=3641 GN=TCM_007595 PE...	[more]
tr\|A0A2P5BHT1\|A0A2P5BHT1_9ROSA	3.4e-55	64.42	Tubulin-tyrosine ligase OS=Trema orientalis OX=63057 GN=TorRG33x02_320670 PE=4 S...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04111-RA	Carg04111-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..183

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04111	Cla015728	Watermelon (97103) v1	carwmB0194
Carg04111	Csa7G027830	Cucumber (Chinese Long) v2	carcuB0228
Carg04111	MELO3C015697	Melon (DHL92) v3.5.1	carmeB0200
Carg04111	ClCG02G003270	Watermelon (Charleston Gray)	carwcgB0194
Carg04111	CSPI07G02250	Wild cucumber (PI 183967)	carcpiB0235
Carg04111	Cucsa.099890	Cucumber (Gy14) v1	carcgyB0237
Carg04111	CmaCh19G008110	Cucurbita maxima (Rimu)	carcmaB0279
Carg04111	CmaCh11G013210	Cucurbita maxima (Rimu)	carcmaB0272
Carg04111	CmoCh19G008320	Cucurbita moschata (Rifu)	carcmoB0286
Carg04111	CmoCh11G018000	Cucurbita moschata (Rifu)	carcmoB0276
Carg04111	Lsi11G013050	Bottle gourd (USVL1VR-Ls)	carlsiB174
Carg04111	Cp4.1LG15g06470	Cucurbita pepo (Zucchini)	carcpeB0281
Carg04111	Cp4.1LG04g04410	Cucurbita pepo (Zucchini)	carcpeB0288
Carg04111	CsGy7G001970	Cucumber (Gy14) v2	carcgybB0217
Carg04111	MELO3C015697.2	Melon (DHL92) v3.6.1	carmedB0205
Carg04111	CsaV3_7G002100	Cucumber (Chinese Long) v3	carcucB0232
Carg04111	Cla97C02G029810	Watermelon (97103) v2	carwmbB0202
Carg04111	Bhi05G001338	Wax gourd	carwgoB0251

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg04111	Carg18104	Silver-seed gourd	carcarB242

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04111	Silver-seed gourd	carcarB232
Carg04111	Silver-seed gourd	carcarB237
Carg04111	Cucumber (Gy14) v2	carcgybB0216
Carg04111	Cucumber (Gy14) v1	carcgyB0240
Carg04111	Cucurbita maxima (Rimu)	carcmaB0280
Carg04111	Cucurbita maxima (Rimu)	carcmaB0281
Carg04111	Cucurbita moschata (Rifu)	carcmoB0278
Carg04111	Cucurbita moschata (Rifu)	carcmoB0287
Carg04111	Cucurbita moschata (Rifu)	carcmoB0288
Carg04111	Cucurbita pepo (Zucchini)	carcpeB0282
Carg04111	Wild cucumber (PI 183967)	carcpiB0234
Carg04111	Cucumber (Chinese Long) v2	carcuB0227
Carg04111	Cucumber (Chinese Long) v3	carcucB0231
Carg04111	Bottle gourd (USVL1VR-Ls)	carlsiB173
Carg04111	Melon (DHL92) v3.5.1	carmeB0197
Carg04111	Melon (DHL92) v3.6.1	carmedB0201
Carg04111	Watermelon (Charleston Gray)	carwcgB0195