Carg17969 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17969
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Nuclear transcription factor Y subunit A
Location	Cucurbita_argyrosperma_scaffold_171 : 51263 .. 55585 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAGCTGCTGAAAATTTTTCATTTTTGGAAATTCATAGAGTTTTTCAATTCACCTTCTTAAGGGATTAATTTCTACTCTCTGTTTTTCGATTTATTACAGACAATTCTCTCTATTTTCTCTTCGATCCTATTTGATTTTCCTGTTTTCTCCATTTCGACGTTGCTCCAATTCCCATCGGTAAGCAATTTTTCTTTTGGATTTCTATGGCTGTTTATCTGGTTTTTGATTTCTAGGGTATTCGCGCAATTCACTGTTTTAGGGCTTTAAATCTTCTTTTGGGTTTTGGGTTTGTGGGTGATCGATTGTTTTGGGATTTGGTTTGATTCTGCGATTGTTGGGGGAATTGGAGGCGATGATTGATGTGTTATCGATGAGAATTCCTGTTTTTCTTTTGGGTATTCTTTTTTTGCGTGGTAATCATGTGTCAGATTTTGTAACAGCTTTGAAACTGGATAAAGCATTTTGAAGATGATGATGAATAAAGGAACTGAAAATTTATGTTTCTTGATTCTTCCTAGGTCACTTTTGCATCGGATGGTTGAATAATTGAGAGTTTAGCTTACGAATTTTGATTTGCTGTTGATGGGAATTTAGTGCGTGGAAAATAGTTGTTATGTACTTAGTTACTACTTTTTTTTAAAGAAACCTAGACGCTATATGAAAGGGGATCAGTACTTAAGTGTAATTACCTGAGATTTGTTCTACTTTGTTATGTTAAATTTAATTTGTACCAAGTTTGTATGAACTGGTTCTATGTTTTGTTGGATCTTAGGAGGAGGTTAGGATGTTGGAAACGAACTGTTTGGGTATGCAACTTTCAGGTTTTACTTGTTGGTTCATTTGGTTCAACTGATTGTGAAAACGGGATCTACGTTAGTCTTATCGATTAGTTCAAGTTTTAACTTCGGATAGTTTCTAGTTTAGCTTTGTTTGATTTGCTTTTGTTGGTGGGACCAAATGCATTTGGAGCAAATCCTAGTTAGATTTCGATATGATATGGTTGATTGTATTTTGTTGACTGCATTTTTGTATTCTTTTTATGTCTTTTTGTTGCTACAACTTGGTGCCCTACATCATTAAATCAATTTTTGGAACATTAATCCCTAAATTTCAACTGAGTCACATATGGGAGAGTGTAGCCGTCCAGGAAAACTAAACTGAGTCACATATTGCATAAAACAAAAGGGATGTTGAACACAGTTTAGTCAAAAGGTACTGAAAAGATGTGATTTCACTGGACTGAATCATGAAAAGCATTTTTTCTTTATGTTTTTGTCCAAAGGTATTGGAAAGATGTAACAATACAGGATTGAATCATGAAGAACATCGTTTGAAATGTTCTTTTATGCCTCCTGCAGTTACTTTTTACTCCTTGCCCTTGTGAACTTGAAGGGACAAGAGGAATTTTTCCTAAAGAAAGAGATTGAATGAGTCTAGGAGCTCCCTAATTACCTGTGTTAGCTTTCAACTTCCTGTTGTGATGAGATTAGATTACAATTGAGAAGGAATAATACTTAAATTCTAACTGCGAATAGGAAAGGATGCTTTCTTCAATTATTGGTTATCAAAAAAATTTCACTCTGGTTATTAAGAACTCGAGGCTCTTTTGTTTTTCAAAGGGTTTGAAGGCATGCAGTCGAAATCCGAAACCAATAATCAGTTTGAATCTGATCCAAACGGTACTCCATCCACGAGTATCTATTACGAACCCTGGTGGCGTGGTATTGGATACAACCCTATTCCGCTACCTATGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCGAACGATGGCCAGTCGGTGTCTAATAATGACGTCAATGATGAAGAAGATGTTTCCAAAGAAGTTCAAGCTACTGGATCTCCACATTCTGGTACATCATTACTCCTTTAACCATTAAAGTACTGAACAGTCTTTTAGCTTTTCTGTTTTGTGCCTGACAATATTGAATCTTATCTTCTTTAGAGGTGTTATTATGAAATTGGAGGCTTGCTTTAGGACTCAAAACTTCACTCTGTCTGGATCATTTTTTGAAACTATTTTAAGAAGAAATAAATACGGCAAGAGAGTGGCCGTTGTGTGTGTTTTTTTCAAAACAACCACCAAATATGCCCTTATAACAATTACATCTTCTAATTTCAGCTGGAAATTACAGACAGGCTGCTCAGAAGATGCAGCATGTTTCATCTACTTTTCCAGTAATGCATGGTGAATGTCTGATGCAGTCGACACAACTCGAACTTGTAGGCCACTCTATTGTATGTTCCATTGCTGTCTAATCTTAGAAAACGCTTTATGTTCTAACAATTTTCGAGCTTTTAGTCCCAAAGTTAAAGATTCCATTAAAAAATTGGTCAAGTTATGTTTTATAATTACATGACTGAAGAACTTCCTGTGTCTTTTGTGGTACTATTGCAGGCATGTGCGTCAAACCCATATCAGGATCCATCTTATGGAGGAATGATGGCTTTTTATGGCCATCAGCCTTTGGTATGTTATTAACTCAAATTTCGTACAAACGAGTGAGTGGTTTCACTGTTTTAGCTTCTTTTCCATTACTTGGCTGTGCTCATCTTCCATAGCTGTTGAAATTAAAATCCGAAGGACACAGAACAGGGCTTTTGACCCTCTTAAGAGATGGAACTTCAAATCCGAGAACAAAAGTGTGAGATCCCACATTGATGGGAGAGGGGAAGGAAACATTCCTTATAAGGGAGTAGAGACCTCTTCTTAGTAGACGCATTTTAAAATCTTAAGGGAAATCCCGAAAGGGCAAGCCCAAAAAGAACAATATTTGCTAGCGATGGGTTTGGCTATTACAAATTGTATCAGAGCCAGACATCGGACGGTGTACGAACGAGTACGCTAGGCCCCTGAGAGGAGTGGATTGTAAGATCCCACATTGGTTGGAGAGGAGAACGAAAAATTTCTTATAAGGGTGTGGAAACCTCTTCCTAGAAGACGCCTTGAGGGGGAATTTCGAAAGGGCAAACCTAAAGAGGACAATATCTGCTAGCAGTGGTCTTGGGCTGTTTCAAAAAGGATCATGCTCTACCTTCATGAAAAATTGTGTTTGTGCATTCAAACCTGCCAAACTCAATTGGTTTGTTGTCATACATCTGTTTAAATTTTGCTTTTACTTCTGGTTCTGGGGTCGTTTTCGTGGACAGTTCCTGAAATATTATGCTGACTGTTGAGTGGTTAATGCTGATGATTTGAATTAGGACCTGTATTTGTACATGTAATACTCTCCCATCGTGAATGGCTCGAAGAACAATGCTTCTCAGTTTACATTTTCTCAACAAATCTTGTTACTTACAGTGTAGTTTGTCTGCAGGGATTTTAACACTGTTCTTCAATCTTTTAAATTTTTAATGAAGGTTTTTTTTTTTGTATAACCCTAGAAGAAAATTGATTATATGTGATCATTTATTGTGTCCAGTATAGCTTCAGAATACACAGAGAGCTGACATTTTCATTGTACAAGACTTTAATGACAAAAATCTCATGCTTAGGTAGTAACTTCAAATATTTCTCATATACAGGGCTATCCTATGGTCGGAATGCCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTATTGGTGAATGCGAAGCAGTACCAAGGAATTTTGAGGAGAAGGCAAGCGCGTGCAAAAGCCGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGGTGGATTTCGTATCTTTTTGAGAATGATCAATCTTTTAAACAACTCATCAAATCAAGATTTATATGCCCTGAATAGACAATATTGATGGTTAGCACCTGGGATATAGATTTAGGTTGTACTGTAATGGACCATGTTCAATATCTTATAACACTGAACTGCCATGAAATAGTTCTGCTGTGGTTCTGTCTGCTATCTAAACTAGTTCAATCAATCTATTCAGAAGTTGTTAGTTAATAACTATAGATACAAAGGAGTTATTTATACCAAACGCTTATGGTTAAGCATGTTACAACCACTTAATTGTTATAGATACTCACTCGAACTCGAACTCAGCTTAGAATATACACAAGAGTTCAATTTTTGGCTATGCTGCTCACTTTTCTTATTCAACAGCCATATCTTCATGAGTCTAGACACCAGCATGCCATAAGAAGGACAAGGGGTAGCGGAGGGCGTTTCACCAAGAAAAACGAAGCTGATGGAAAGGAGATGCATTCTGATGAAGTAAATGAGAATGGTCGCCATCTAAATGACGGTTCTAAACAGCAGAATGGAAGCTCCTTGACGAACATGGCCTCTGAGTAG

mRNA sequence

CTTAGCTGCTGAAAATTTTTCATTTTTGGAAATTCATAGAGTTTTTCAATTCACCTTCTTAAGGGATTAATTTCTACTCTCTGTTTTTCGATTTATTACAGACAATTCTCTCTATTTTCTCTTCGATCCTATTTGATTTTCCTGTTTTCTCCATTTCGACGTTGCTCCAATTCCCATCGGAGGAGGTTAGGATGTTGGAAACGAACTGTTTGGGTATGCAACTTTCAGGGTTTGAAGGCATGCAGTCGAAATCCGAAACCAATAATCAGTTTGAATCTGATCCAAACGGTACTCCATCCACGAGTATCTATTACGAACCCTGGTGGCGTGGTATTGGATACAACCCTATTCCGCTACCTATGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCGAACGATGGCCAGTCGGTGTCTAATAATGACGTCAATGATGAAGAAGATGTTTCCAAAGAAGTTCAAGCTACTGGATCTCCACATTCTGCTGGAAATTACAGACAGGCTGCTCAGAAGATGCAGCATGTTTCATCTACTTTTCCAGTAATGCATGGTGAATGTCTGATGCAGTCGACACAACTCGAACTTGTAGGCCACTCTATTGCATGTGCGTCAAACCCATATCAGGATCCATCTTATGGAGGAATGATGGCTTTTTATGGCCATCAGCCTTTGGGCTATCCTATGGTCGGAATGCCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTATTGGTGAATGCGAAGCAGTACCAAGGAATTTTGAGGAGAAGGCAAGCGCGTGCAAAAGCCGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGGTGGATTTCCCATATCTTCATGAGTCTAGACACCAGCATGCCATAAGAAGGACAAGGGGTAGCGGAGGGCGTTTCACCAAGAAAAACGAAGCTGATGGAAAGGAGATGCATTCTGATGAAGTAAATGAGAATGGTCGCCATCTAAATGACGGTTCTAAACAGCAGAATGGAAGCTCCTTGACGAACATGGCCTCTGAGTAG

Coding sequence (CDS)

ATGTTGGAAACGAACTGTTTGGGTATGCAACTTTCAGGGTTTGAAGGCATGCAGTCGAAATCCGAAACCAATAATCAGTTTGAATCTGATCCAAACGGTACTCCATCCACGAGTATCTATTACGAACCCTGGTGGCGTGGTATTGGATACAACCCTATTCCGCTACCTATGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCGAACGATGGCCAGTCGGTGTCTAATAATGACGTCAATGATGAAGAAGATGTTTCCAAAGAAGTTCAAGCTACTGGATCTCCACATTCTGCTGGAAATTACAGACAGGCTGCTCAGAAGATGCAGCATGTTTCATCTACTTTTCCAGTAATGCATGGTGAATGTCTGATGCAGTCGACACAACTCGAACTTGTAGGCCACTCTATTGCATGTGCGTCAAACCCATATCAGGATCCATCTTATGGAGGAATGATGGCTTTTTATGGCCATCAGCCTTTGGGCTATCCTATGGTCGGAATGCCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTATTGGTGAATGCGAAGCAGTACCAAGGAATTTTGAGGAGAAGGCAAGCGCGTGCAAAAGCCGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGGTGGATTTCCCATATCTTCATGAGTCTAGACACCAGCATGCCATAAGAAGGACAAGGGGTAGCGGAGGGCGTTTCACCAAGAAAAACGAAGCTGATGGAAAGGAGATGCATTCTGATGAAGTAAATGAGAATGGTCGCCATCTAAATGACGGTTCTAAACAGCAGAATGGAAGCTCCTTGACGAACATGGCCTCTGAGTAG

Protein sequence

MLETNCLGMQLSGFEGMQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRFTKKNEADGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE

Homology

[Close]

BLAST of Carg17969 vs. NCBI nr
Match: XP_022968054.1 (nuclear transcription factor Y subunit A-1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 522.7 bits (1345), Expect = 7.9e-145
Identity = 267/273 (97.80%), Postives = 269/273 (98.53%), Query Frame = 0


Query: 17  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSE 76
           MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLP+VGGN+SSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPVVGGNSSSSTSLEFPNGGSE 60

Query: 77  SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST 136
           SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST
Sbjct: 61  SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST 120

Query: 137 QLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNA 196
           QLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYP VGMPHARMPLPIEIAQDPVLVNA
Sbjct: 121 QLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPTVGMPHARMPLPIEIAQDPVLVNA 180

Query: 197 KQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRFTKKNEADG 256
           KQYQGILRRRQARAKAEAEKKSIKARK   PYLHESRHQHAIRRTRGSGGRFTKKNEADG
Sbjct: 181 KQYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRTRGSGGRFTKKNEADG 240

Query: 257 KEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE 290
           KEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE
Sbjct: 241 KEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE 270

[Close]

BLAST of Carg17969 vs. NCBI nr
Match: XP_022926860.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 521.9 bits (1343), Expect = 1.4e-144
Identity = 269/274 (98.18%), Postives = 270/274 (98.54%), Query Frame = 0


Query: 17  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSE 76
           MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSE 60

Query: 77  SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST 136
           SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST
Sbjct: 61  SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST 120

Query: 137 QLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNA 196
           QLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNA
Sbjct: 121 QLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNA 180

Query: 197 KQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRFTKKNEA-D 256
           KQYQGILRRRQARAKAEAEKKSIKARK   PYLHESRHQHAIRRTRGSGGRFTKKNEA D
Sbjct: 181 KQYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRTRGSGGRFTKKNEADD 240

Query: 257 GKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE 290
           GKEMHSDEVNENGRHLNDGSKQQNGSSLTNMAS+
Sbjct: 241 GKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD 271

[Close]

BLAST of Carg17969 vs. NCBI nr
Match: XP_023530428.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 520.4 bits (1339), Expect = 3.9e-144
Identity = 267/273 (97.80%), Postives = 268/273 (98.17%), Query Frame = 0


Query: 17  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSE 76
           MQSKSETN+QFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEF NGGSE
Sbjct: 1   MQSKSETNSQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFANGGSE 60

Query: 77  SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST 136
           SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST
Sbjct: 61  SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST 120

Query: 137 QLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNA 196
           QLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNA
Sbjct: 121 QLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNA 180

Query: 197 KQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRFTKKNEADG 256
           KQYQGILRRRQARAKAEAEKK IKARK   PYLHESRHQHAIRRTRGSGGRFTKKNEADG
Sbjct: 181 KQYQGILRRRQARAKAEAEKKLIKARK---PYLHESRHQHAIRRTRGSGGRFTKKNEADG 240

Query: 257 KEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE 290
           KEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE
Sbjct: 241 KEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE 270

[Close]

BLAST of Carg17969 vs. NCBI nr
Match: XP_022968063.1 (nuclear transcription factor Y subunit A-1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 506.5 bits (1303), Expect = 5.9e-140
Identity = 262/273 (95.97%), Postives = 264/273 (96.70%), Query Frame = 0


Query: 17  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSE 76
           MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLP+VGGN+SSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPVVGGNSSSSTSLEFPNGGSE 60

Query: 77  SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST 136
           SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST
Sbjct: 61  SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST 120

Query: 137 QLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNA 196
           QLEL     ACASNPYQDPSYGGMMAFYGHQPLGYP VGMPHARMPLPIEIAQDPVLVNA
Sbjct: 121 QLEL-----ACASNPYQDPSYGGMMAFYGHQPLGYPTVGMPHARMPLPIEIAQDPVLVNA 180

Query: 197 KQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRFTKKNEADG 256
           KQYQGILRRRQARAKAEAEKKSIKARK   PYLHESRHQHAIRRTRGSGGRFTKKNEADG
Sbjct: 181 KQYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRTRGSGGRFTKKNEADG 240

Query: 257 KEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE 290
           KEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE
Sbjct: 241 KEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE 265

[Close]

BLAST of Carg17969 vs. NCBI nr
Match: XP_022926867.1 (nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 505.8 bits (1301), Expect = 1.0e-139
Identity = 264/274 (96.35%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 17  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSE 76
           MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSE 60

Query: 77  SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST 136
           SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST
Sbjct: 61  SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST 120

Query: 137 QLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNA 196
           QLEL     ACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNA
Sbjct: 121 QLEL-----ACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNA 180

Query: 197 KQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRFTKKNEA-D 256
           KQYQGILRRRQARAKAEAEKKSIKARK   PYLHESRHQHAIRRTRGSGGRFTKKNEA D
Sbjct: 181 KQYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRTRGSGGRFTKKNEADD 240

Query: 257 GKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE 290
           GKEMHSDEVNENGRHLNDGSKQQNGSSLTNMAS+
Sbjct: 241 GKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD 266

[Close]

BLAST of Carg17969 vs. TAIR10
Match: AT5G12840.1 (nuclear factor Y, subunit A1)

HSP 1 Score: 189.1 bits (479), Expect = 3.8e-48
Identity = 124/266 (46.62%), Postives = 161/266 (60.53%), Query Frame = 0


Query: 17  MQSKSETNNQFE-SDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGS 76
           MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 77  ESNDGQSVSNND-VNDEEDVS-KEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLM 136
           ESND  S S +  +N E D + K+ QA  S  S  N+     +    + +   MH + L+
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNH---GMEGNDPALSIRNMHDQPLV 120

Query: 137 QSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPV 196
           Q    ELVGH IAC  NPYQDP YGG+M  YGHQ LG+ P +GMP  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 197 LVNAKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRFTKKN 256
            VNAKQY+GILRRR+ARAKAE E+K I+ RK   PYLHESRH+HA+RR R SGGRF KK+
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRK---PYLHESRHKHAMRRARASGGRFAKKS 240

Query: 257 EADGKEMHSDEVNENGRHLNDGSKQQ 279
           E +  E       E G   N    +Q
Sbjct: 241 EVEAGEDAGGRDRERGSATNSSGSEQ 257

[Close]

BLAST of Carg17969 vs. TAIR10
Match: AT3G20910.1 (nuclear factor Y, subunit A9)

HSP 1 Score: 188.0 bits (476), Expect = 8.4e-48
Identity = 132/272 (48.53%), Postives = 161/272 (59.19%), Query Frame = 0


Query: 13  GFEGMQSKSET-NNQFESDPNGTPSTSI-YYEPWWR-GIGYNPIPLPMVGGNASSSTSLE 72
           G E M SKS++  N+ +S+ +GT S+SI    PW R     N       G  +S S +L 
Sbjct: 2   GIEDMHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALA 61

Query: 73  FPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHG 132
                 ESN  +S SN D      V+KE Q T SP SAG+Y    Q+  H   T P  H 
Sbjct: 62  L-----ESNGSKSPSNRD----NTVNKESQVTTSPQSAGDYSDKNQESLHHGITQPPPHP 121

Query: 133 ECLMQSTQLELVGHSIACA-SNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEI 192
                    +LVGH++  A SNPYQDP Y G+M  YGH PLG+ P  GMPH+RMPLP E+
Sbjct: 122 ---------QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEM 181

Query: 193 AQDPVLVNAKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGR 252
           AQ+PV VNAKQYQ ILRRRQARAKAE EKK IK+RK   PYLHESRHQHA+RR RG+GGR
Sbjct: 182 AQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRK---PYLHESRHQHAMRRPRGTGGR 241

Query: 253 FTKKNEADGKEMHSDEVNENGRHLNDGSKQQN 280
           F KK   +  +  ++E   NG H+       N
Sbjct: 242 FAKKTNTEASKRKAEE-KSNG-HVTQSPSSSN 250

[Close]

BLAST of Carg17969 vs. TAIR10
Match: AT2G34720.1 (nuclear factor Y, subunit A4)

HSP 1 Score: 101.7 bits (252), Expect = 7.9e-22
Identity = 72/167 (43.11%), Postives = 90/167 (53.89%), Query Frame = 0


Query: 101 TGSPHS-AGNYRQAAQKMQHVSSTFP-VMHGECLMQSTQLELVGHSIACASNPYQDPSYG 160
           T S H  + N    A+K +  S T P V  G          +    +A    PY DP Y 
Sbjct: 2   TSSVHELSDNNESHAKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHGLYPYPDPYYR 61

Query: 161 GMMAFYGHQPLGYP-----MVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAE 220
            + A   + P  YP     ++GM    +PL  +  ++PV VNAKQY GILRRRQ+RAK E
Sbjct: 62  SVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLE 121

Query: 221 AEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRF--TKKNEADGKE 259
           A  ++IKA+K   PY+HESRH HAIRR RG GGRF   KK   D KE
Sbjct: 122 ARNRAIKAKK---PYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE 165

[Close]

BLAST of Carg17969 vs. TAIR10
Match: AT1G30500.2 (nuclear factor Y, subunit A7)

HSP 1 Score: 95.5 bits (236), Expect = 5.7e-20
Identity = 63/153 (41.18%), Postives = 86/153 (56.21%), Query Frame = 0


Query: 108 GNYRQAAQKMQHVSSTFP-VMHGECLMQSTQLELVG--HSIACASNPYQDPSYGGMMAFY 167
           G++ +  Q+  H     P   + E ++ S      G  +S+A    PY DP Y  + A  
Sbjct: 13  GSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPGQYPYPDPYYRSIFAPP 72

Query: 168 GHQPLG--YPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEKKSIKAR 227
                G    ++G+    +PLP +  ++PV VNAKQY GILRRRQ+RA+ E++ K IK+R
Sbjct: 73  PQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSR 132

Query: 228 KVDFPYLHESRHQHAIRRTRGSGGRFTKKNEAD 256
           K   PYLHESRH HAIRR RG GGRF    + D
Sbjct: 133 K---PYLHESRHLHAIRRPRGCGGRFLNAKKED 162

[Close]

BLAST of Carg17969 vs. TAIR10
Match: AT1G72830.2 (nuclear factor Y, subunit A3)

HSP 1 Score: 95.1 bits (235), Expect = 7.4e-20
Identity = 85/225 (37.78%), Postives = 113/225 (50.22%), Query Frame = 0


Query: 60  GNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQ----AAQ 119
           G+  ++  + F +  S S      S  +V    D +   Q + S  S     Q    A+ 
Sbjct: 53  GHIQTTKQISFQDQDSSSTQSTGQSYTEVASSGDDNPSRQISFSAKSGSEITQRKGFASN 112

Query: 120 KMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMA--FYGHQPLGYP- 179
             Q   + FP +H        Q     H        Y DP YGG++A  +    P   P 
Sbjct: 113 PKQGSMTGFPNIH----FAPAQANFSFH--------YADPHYGGLLAATYLPQAPTCNPQ 172

Query: 180 MVGMPHARMPLPIEIAQ-DPVLVNAKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHE 239
           MV M   R+PLP E+ + DPV VNAKQY  I+RRRQ RAK EA+ K I+ARKV  PYLHE
Sbjct: 173 MVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKV--PYLHE 232

Query: 240 SRHQHAIRRTRGSGGRF--TKK--NEADGKEMHSDEVNENGRHLN 273
           SRH HA++R RGSGGRF  TKK   E++       E ++ G+ +N
Sbjct: 233 SRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQEQDKLGQQVN 263

[Close]

BLAST of Carg17969 vs. Swiss-Prot
Match: sp|Q9LXV5|NFYA1_ARATH (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 6.8e-47
Identity = 124/266 (46.62%), Postives = 161/266 (60.53%), Query Frame = 0


Query: 17  MQSKSETNNQFE-SDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGS 76
           MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 77  ESNDGQSVSNND-VNDEEDVS-KEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLM 136
           ESND  S S +  +N E D + K+ QA  S  S  N+     +    + +   MH + L+
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNH---GMEGNDPALSIRNMHDQPLV 120

Query: 137 QSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPV 196
           Q    ELVGH IAC  NPYQDP YGG+M  YGHQ LG+ P +GMP  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 197 LVNAKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRFTKKN 256
            VNAKQY+GILRRR+ARAKAE E+K I+ RK   PYLHESRH+HA+RR R SGGRF KK+
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRK---PYLHESRHKHAMRRARASGGRFAKKS 240

Query: 257 EADGKEMHSDEVNENGRHLNDGSKQQ 279
           E +  E       E G   N    +Q
Sbjct: 241 EVEAGEDAGGRDRERGSATNSSGSEQ 257

[Close]

BLAST of Carg17969 vs. Swiss-Prot
Match: sp|Q945M9|NFYA9_ARATH (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-46
Identity = 132/272 (48.53%), Postives = 161/272 (59.19%), Query Frame = 0


Query: 13  GFEGMQSKSET-NNQFESDPNGTPSTSI-YYEPWWR-GIGYNPIPLPMVGGNASSSTSLE 72
           G E M SKS++  N+ +S+ +GT S+SI    PW R     N       G  +S S +L 
Sbjct: 2   GIEDMHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALA 61

Query: 73  FPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHG 132
                 ESN  +S SN D      V+KE Q T SP SAG+Y    Q+  H   T P  H 
Sbjct: 62  L-----ESNGSKSPSNRD----NTVNKESQVTTSPQSAGDYSDKNQESLHHGITQPPPHP 121

Query: 133 ECLMQSTQLELVGHSIACA-SNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEI 192
                    +LVGH++  A SNPYQDP Y G+M  YGH PLG+ P  GMPH+RMPLP E+
Sbjct: 122 ---------QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEM 181

Query: 193 AQDPVLVNAKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGR 252
           AQ+PV VNAKQYQ ILRRRQARAKAE EKK IK+RK   PYLHESRHQHA+RR RG+GGR
Sbjct: 182 AQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRK---PYLHESRHQHAMRRPRGTGGR 241

Query: 253 FTKKNEADGKEMHSDEVNENGRHLNDGSKQQN 280
           F KK   +  +  ++E   NG H+       N
Sbjct: 242 FAKKTNTEASKRKAEE-KSNG-HVTQSPSSSN 250

[Close]

BLAST of Carg17969 vs. Swiss-Prot
Match: sp|Q8VY64|NFYA4_ARATH (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20
Identity = 72/167 (43.11%), Postives = 90/167 (53.89%), Query Frame = 0


Query: 101 TGSPHS-AGNYRQAAQKMQHVSSTFP-VMHGECLMQSTQLELVGHSIACASNPYQDPSYG 160
           T S H  + N    A+K +  S T P V  G          +    +A    PY DP Y 
Sbjct: 2   TSSVHELSDNNESHAKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHGLYPYPDPYYR 61

Query: 161 GMMAFYGHQPLGYP-----MVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAE 220
            + A   + P  YP     ++GM    +PL  +  ++PV VNAKQY GILRRRQ+RAK E
Sbjct: 62  SVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLE 121

Query: 221 AEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRF--TKKNEADGKE 259
           A  ++IKA+K   PY+HESRH HAIRR RG GGRF   KK   D KE
Sbjct: 122 ARNRAIKAKK---PYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE 165

[Close]

BLAST of Carg17969 vs. Swiss-Prot
Match: sp|Q84JP1|NFYA7_ARATH (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-18
Identity = 63/153 (41.18%), Postives = 86/153 (56.21%), Query Frame = 0


Query: 108 GNYRQAAQKMQHVSSTFP-VMHGECLMQSTQLELVG--HSIACASNPYQDPSYGGMMAFY 167
           G++ +  Q+  H     P   + E ++ S      G  +S+A    PY DP Y  + A  
Sbjct: 13  GSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPGQYPYPDPYYRSIFAPP 72

Query: 168 GHQPLG--YPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEKKSIKAR 227
                G    ++G+    +PLP +  ++PV VNAKQY GILRRRQ+RA+ E++ K IK+R
Sbjct: 73  PQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSR 132

Query: 228 KVDFPYLHESRHQHAIRRTRGSGGRFTKKNEAD 256
           K   PYLHESRH HAIRR RG GGRF    + D
Sbjct: 133 K---PYLHESRHLHAIRRPRGCGGRFLNAKKED 162

[Close]

BLAST of Carg17969 vs. Swiss-Prot
Match: sp|Q93ZH2|NFYA3_ARATH (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 5.1e-18
Identity = 84/225 (37.33%), Postives = 112/225 (49.78%), Query Frame = 0


Query: 60  GNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQ----AAQ 119
           G+  ++  + F +  S S      S  +V    D +   Q + S  S     Q    A+ 
Sbjct: 53  GHIQTTKQISFQDQDSSSTQSTGQSYTEVASSGDDNPSRQISFSAKSGSEITQRKGFASN 112

Query: 120 KMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMA--FYGHQPLGYP- 179
             Q   + FP +H        Q     H        Y DP YGG++A  +    P   P 
Sbjct: 113 PKQGSMTGFPNIH----FAPAQANFSFH--------YADPHYGGLLAATYLPQAPTCNPQ 172

Query: 180 MVGMPHARMPLPIEIAQ-DPVLVNAKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHE 239
           MV M   R+PLP E+ + DPV VNAKQY  I+RRRQ RAK EA+ K I+ARK   PYLHE
Sbjct: 173 MVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARK---PYLHE 232

Query: 240 SRHQHAIRRTRGSGGRF--TKK--NEADGKEMHSDEVNENGRHLN 273
           SRH HA++R RGSGGRF  TKK   E++       E ++ G+ +N
Sbjct: 233 SRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQEQDKLGQQVN 262

[Close]

BLAST of Carg17969 vs. TrEMBL
Match: tr|A0A1S3BP85|A0A1S3BP85_CUCME (nuclear transcription factor Y subunit A-1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492032 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 1.6e-125
Identity = 244/287 (85.02%), Postives = 254/287 (88.50%), Query Frame = 0


Query: 7   LGMQLSGF---EGMQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNAS 66
           LG    GF   EGMQSKSETNNQ   DPNG PSTSIYYEPWWRG+GYN  PLP+VGGNAS
Sbjct: 9   LGFFQGGFERVEGMQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNAS 68

Query: 67  SSTSLEFPNGGSESNDGQSVSNNDVNDEE-DVSKEVQATGSPHSAGNYRQAAQKMQHVSS 126
           SSTSLEFPNGGSESNDGQSVSNNDVNDEE DVSKEVQATGSPHSAG+YRQ  +KMQHVSS
Sbjct: 69  SSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSS 128

Query: 127 TFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMP 186
           T P MHGECL QSTQLELVGHSIACASNPYQDP YGGMMAFYGHQPLGYPMVG PHARMP
Sbjct: 129 TLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMP 188

Query: 187 LPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTR 246
           LPIEIAQDPV VNAKQYQGILRRRQARAKAEAEKKSIKARK   PYLHESRHQHAIRR+R
Sbjct: 189 LPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRSR 248

Query: 247 GSGGRFTKKNEADGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE 290
            SGGRF KK+EADGKE HSD+V+E+G  LNDGS+QQ GSSL N ASE
Sbjct: 249 SSGGRFAKKSEADGKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE 290

[Close]

BLAST of Carg17969 vs. TrEMBL
Match: tr|A0A0A0M2S3|A0A0A0M2S3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613580 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 3.0e-124
Identity = 239/274 (87.23%), Postives = 249/274 (90.88%), Query Frame = 0


Query: 17  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSE 76
           MQSKSETNNQ +S  NG PSTSIYYEPWWRG+GYN  PLP+VGGNASSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQLDS--NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60

Query: 77  SNDGQSVSNNDVNDEE-DVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQS 136
           SNDGQSVSNNDVNDEE DVSKEVQATGSPHSAG+YRQ  QKMQHVSST P MHGECL QS
Sbjct: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQS 120

Query: 137 TQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVN 196
           TQLELVGHSIACASNPYQDP YGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPV VN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180

Query: 197 AKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRFTKKNEAD 256
           AKQYQGILRRRQARAKAEAEKKSIKARK   PYLHESRHQHAIRR+R SGGRF KK+EA+
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRSRSSGGRFAKKSEAE 240

Query: 257 GKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE 290
           GKE HSD+VNE+   LNDGS+QQNGSSLTN ASE
Sbjct: 241 GKEKHSDKVNESDYRLNDGSEQQNGSSLTNKASE 269

[Close]

BLAST of Carg17969 vs. TrEMBL
Match: tr|A0A1S3BPV3|A0A1S3BPV3_CUCME (nuclear transcription factor Y subunit A-1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492032 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 3.9e-124
Identity = 238/274 (86.86%), Postives = 248/274 (90.51%), Query Frame = 0


Query: 17  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSE 76
           MQSKSETNNQ   DPNG PSTSIYYEPWWRG+GYN  PLP+VGGNASSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60

Query: 77  SNDGQSVSNNDVNDEE-DVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQS 136
           SNDGQSVSNNDVNDEE DVSKEVQATGSPHSAG+YRQ  +KMQHVSST P MHGECL QS
Sbjct: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQS 120

Query: 137 TQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVN 196
           TQLELVGHSIACASNPYQDP YGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPV VN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180

Query: 197 AKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRFTKKNEAD 256
           AKQYQGILRRRQARAKAEAEKKSIKARK   PYLHESRHQHAIRR+R SGGRF KK+EAD
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRSRSSGGRFAKKSEAD 240

Query: 257 GKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASE 290
           GKE HSD+V+E+G  LNDGS+QQ GSSL N ASE
Sbjct: 241 GKEKHSDKVSESGYRLNDGSEQQKGSSLMNKASE 269

[Close]

BLAST of Carg17969 vs. TrEMBL
Match: tr|A0A061GTI4|A0A061GTI4_THECC (Nuclear transcription factor Y subunit A-9, putative OS=Theobroma cacao OX=3641 GN=TCM_040712 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.8e-81
Identity = 165/240 (68.75%), Postives = 188/240 (78.33%), Query Frame = 0


Query: 17  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSE 76
           MQSKSE  ++ E D +G P T++Y EPWWR IGY+ I   + GGN S+S+S+E PN GSE
Sbjct: 1   MQSKSEGGSRLEPDLHGVPPTAVYSEPWWRNIGYSAISPGVRGGNTSNSSSMECPN-GSE 60

Query: 77  SNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQST 136
           SNDGQS+SN  VN+E+D +KE Q T S  S GN  Q    +QHV+ST P MH ECL Q  
Sbjct: 61  SNDGQSLSNGGVNEEDDGNKETQTTASSRSVGNGGQEHHNLQHVASTMPAMHDECLTQPP 120

Query: 137 QLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVN 196
           QLELVGHSIACA+NPYQDP YGGMMA YGHQPLGY P VGMPHARM LPIE+AQ+PV VN
Sbjct: 121 QLELVGHSIACAANPYQDPFYGGMMAAYGHQPLGYPPFVGMPHARMALPIEMAQEPVYVN 180

Query: 197 AKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRFTKKNEAD 256
           AKQYQGILRRRQARAKAE EKK +K RK   PYLHESRHQHA+RR RGSGGRF KK++AD
Sbjct: 181 AKQYQGILRRRQARAKAELEKKVVKVRK---PYLHESRHQHAMRRARGSGGRFAKKSDAD 236

[Close]

BLAST of Carg17969 vs. TrEMBL
Match: tr|K7MQE5|K7MQE5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100808378 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.5e-80
Identity = 163/254 (64.17%), Postives = 195/254 (76.77%), Query Frame = 0


Query: 17  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSE 76
           MQSKSET N+  SDP+     S+Y EPWWRGIGYNP+   M G NAS+S+SLE PNG SE
Sbjct: 1   MQSKSETANRLRSDPHSFQPGSVYSEPWWRGIGYNPVAQTMAGANASNSSSLECPNGDSE 60

Query: 77  SN-DGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVSSTFPVMHGECLMQS 136
           SN +GQS+SN+ +N+E+D + +     +P+  GNY Q  Q MQH +S+ P M  ECL Q+
Sbjct: 61  SNEEGQSLSNSGMNEEDDDATKDSQPAAPNGTGNYGQEQQGMQHTASSAPSMREECLTQT 120

Query: 137 TQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLV 196
            QLELVGHSIACA+NPYQDP YGGMMA YGHQ LGY P +GMPHARMPLP+E+AQ+PV V
Sbjct: 121 PQLELVGHSIACATNPYQDPYYGGMMAAYGHQQLGYAPFIGMPHARMPLPLEMAQEPVYV 180

Query: 197 NAKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRTRGSGGRFTKKNEA 256
           NAKQYQGILRRRQARAKAE E+K IK+RK   PYLHESRHQHA+RR RG+GGRF KK + 
Sbjct: 181 NAKQYQGILRRRQARAKAELERKLIKSRK---PYLHESRHQHAMRRARGTGGRFAKKTDG 240

Query: 257 DGKEMHSDEVNENG 269
           +G   HS +  +NG
Sbjct: 241 EGSN-HSGKEKDNG 250

The following BLAST results are available for this feature:

BLAST of Carg17969 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968054.1	7.9e-145	97.80	nuclear transcription factor Y subunit A-1 isoform X1 [Cucurbita maxima]	[more]
XP_022926860.1	1.4e-144	98.18	nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata]	[more]
XP_023530428.1	3.9e-144	97.80	nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita pepo subsp...	[more]
XP_022968063.1	5.9e-140	95.97	nuclear transcription factor Y subunit A-1 isoform X2 [Cucurbita maxima]	[more]
XP_022926867.1	1.0e-139	96.35	nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg17969 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12840.1	3.8e-48	46.62	nuclear factor Y, subunit A1	[more]
AT3G20910.1	8.4e-48	48.53	nuclear factor Y, subunit A9	[more]
AT2G34720.1	7.9e-22	43.11	nuclear factor Y, subunit A4	[more]
AT1G30500.2	5.7e-20	41.18	nuclear factor Y, subunit A7	[more]
AT1G72830.2	7.4e-20	37.78	nuclear factor Y, subunit A3	[more]

BLAST of Carg17969 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LXV5\|NFYA1_ARATH	6.8e-47	46.62	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q945M9\|NFYA9_ARATH	1.5e-46	48.53	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q8VY64\|NFYA4_ARATH	1.4e-20	43.11	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q84JP1\|NFYA7_ARATH	1.0e-18	41.18	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q93ZH2\|NFYA3_ARATH	5.1e-18	37.33	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Carg17969 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BP85\|A0A1S3BP85_CUCME	1.6e-125	85.02	nuclear transcription factor Y subunit A-1-like isoform X1 OS=Cucumis melo OX=36...	[more]
tr\|A0A0A0M2S3\|A0A0A0M2S3_CUCSA	3.0e-124	87.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613580 PE=4 SV=1	[more]
tr\|A0A1S3BPV3\|A0A1S3BPV3_CUCME	3.9e-124	86.86	nuclear transcription factor Y subunit A-1-like isoform X2 OS=Cucumis melo OX=36...	[more]
tr\|A0A061GTI4\|A0A061GTI4_THECC	1.8e-81	68.75	Nuclear transcription factor Y subunit A-9, putative OS=Theobroma cacao OX=3641 ...	[more]
tr\|K7MQE5\|K7MQE5_SOYBN	3.5e-80	64.17	Uncharacterized protein OS=Glycine max OX=3847 GN=100808378 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001289	NFYA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17969-RA	Carg17969-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 191..213 score: 73.67 coord: 225..248 score: 71.99
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 187..251 e-value: 1.5E-30 score: 117.5
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 191..248 e-value: 1.9E-23 score: 82.7
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 17..284
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 188..251 score: 31.507
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..289
None	No IPR available	PANTHER	PTHR12632:SF14	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED	coord: 17..284

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17969	Cla006306	Watermelon (97103) v1	carwmB0163
Carg17969	Csa1G613580	Cucumber (Chinese Long) v2	carcuB0191
Carg17969	ClCG03G013220	Watermelon (Charleston Gray)	carwcgB0165
Carg17969	CSPI01G30350	Wild cucumber (PI 183967)	carcpiB0198
Carg17969	Cucsa.143360	Cucumber (Gy14) v1	carcgyB0211
Carg17969	CmaCh02G012530	Cucurbita maxima (Rimu)	carcmaB0233
Carg17969	CmaCh10G009280	Cucurbita maxima (Rimu)	carcmaB0230
Carg17969	CmaCh11G008480	Cucurbita maxima (Rimu)	carcmaB0231
Carg17969	CmaCh20G000890	Cucurbita maxima (Rimu)	carcmaB0232
Carg17969	CmoCh11G008590	Cucurbita moschata (Rifu)	carcmoB0241
Carg17969	CmoCh02G012930	Cucurbita moschata (Rifu)	carcmoB0242
Carg17969	CmoCh10G009720	Cucurbita moschata (Rifu)	carcmoB0240
Carg17969	Lsi06G005270	Bottle gourd (USVL1VR-Ls)	carlsiB155
Carg17969	Cp4.1LG04g12030	Cucurbita pepo (Zucchini)	carcpeB0248
Carg17969	Cp4.1LG16g08750	Cucurbita pepo (Zucchini)	carcpeB0246
Carg17969	Cp4.1LG18g01670	Cucurbita pepo (Zucchini)	carcpeB0247
Carg17969	Cp4.1LG05g04960	Cucurbita pepo (Zucchini)	carcpeB0249
Carg17969	MELO3C015196.2	Melon (DHL92) v3.6.1	carmedB0181
Carg17969	CsaV3_1G042800	Cucumber (Chinese Long) v3	carcucB0198
Carg17969	Cla97C03G063440	Watermelon (97103) v2	carwmbB0178
Carg17969	Bhi02G001309	Wax gourd	carwgoB0221

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17969	Carg18672	Silver-seed gourd	carcarB207
Carg17969	Carg16939	Silver-seed gourd	carcarB208
Carg17969	Carg06900	Silver-seed gourd	carcarB209
Carg17969	Carg02706	Silver-seed gourd	carcarB210

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17969	Cucumber (Gy14) v1	carcgyB0212
Carg17969	Wild cucumber (PI 183967)	carcpiB0199
Carg17969	Cucumber (Chinese Long) v2	carcuB0192
Carg17969	Cucumber (Chinese Long) v3	carcucB0199
Carg17969	Melon (DHL92) v3.5.1	carmeB0178
Carg17969	Melon (DHL92) v3.6.1	carmedB0182
Carg17969	Cucumber (Gy14) v2	carcgybB0186