Carg18672 (gene) Silver-seed gourd

Overview
NameCarg18672
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionnuclear transcription factor Y subunit A-9-like
LocationCucurbita_argyrosperma_scaffold_139 : 87333 .. 89968 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCGAGCGAGGTAGAGAGAGAGAGAGAGTCATGGAACTGAGCTAGAAGACCAGAGAGACCTTCAACCTAAAGCTCCCTAGGGTACGATCGTCTCTTTCGTAATCACATCGCAGTTGTAAGTTGTCTTCCTGCAATTGCTGCTGCTTGTTTTTGATTTTGCTGCTTACAATCGGTATTTTGATCGGAGCATGATTTTCATTAAGGCTCCATTTCTCTTGAGGAATTTGTGCTTGTTTTTCATCTAGTAGCGTCGGAATGATAAAGTATAAGAAAAACTGTTGGAATTTTGAGTTTATGAATGAGGAGAACATACCGGAGTTCGATTGCAAAAGTGATTCTGAACTTGTAATCGTCGTCTCGAATAGGCTGAGAAATTGAACTAGCTATCGTCTTGTTGAGTTACTAATTTCGCCGTAGTGATTATAAACCTACTGTATTTCGTCTTCTTTTTTTCCTTTTTTATTTCTCGATCTCTAGCTTATTTGCTGCATGCTTTTCGGCAACCGGAGAAAGATCTTTGTAGTACCTCTGTTTTGGATCTATGGAAATTGTAGCGATTGAAAGTTTGTATAGAGTAAATGGAAGCGATAGATGTAGTTTGTAACGAATATCTACTGTATTTAACATGTTATTTTCTCGCCATAATTTAGTATCTCTTATTATATTATCTTGAAGCCCCTGTAATGTATTGTAGATGAGCTATATGAATCTCTGATAAGTTGATTTAGGGATGCTAGGAATTCCAGGTTGCTCAGAACTGGGAAATATTGTATCCTAATCAAAGTTTAGGTGCTTCAATCTTCCGATGAGCTTAATAAGTAAAACACTCGATGTCTCCAAAGTCTTTCTTTAAAGCAGACTCGATTATGTTGAGAATCCCCTGATGCTGCGGTGTGGTATAAGTAGGAGTGAATTATTTTGCTTTTCTGTTCTTTCTAATTTTCGCCCTTTTACGGTGACAGTATAAGTTTTGAACGATGCCATCAAAACCAGAAAATGTAGACCAACAAATAGTTGATGGGTCGAAGTATTTGGTACAATCGACCAAATACTCTGAGGCTTGGTGGAATGGAGTTGGGAACAATATCATCGCAGGTGAAGATGCTACCAAAACAGCTTCTGCAGAATACCTGAACGATACTGTTAGCAGTGGAGGAACGCAGTCACAAGCAAATGGTATAAGATTCATTGCTAAAATTGTTATTAATTCTATATATTTGTCTAAGAATACACAATTTAAGCGATATATTGAACCTGTTCTTGATTTAGATGAAAATATTGGGAAAGAAGTTCAGCATCTCAAGTACATTCCGTTTTCTGCATCCCCACCTGTGGGCGAACGCCTTGATCTAAATTCCCAGATGGAACTTGTTGGCCACTCAATTGTAAGATTTGTCTGTCTATCTCTGAAACCAATGTCTATGAAAAGAAACAAACATGAGTAGTGTGCCTAGATGTTTGACTTTTTAGACTTTGCTTCCCTCTTAGCTGGATACAAAAAGGACTTCAAGTATCTCCATTTGCAGGTTTTGACATCATATCCTTTTTCAGATGCACAATATTGCCAAATGCTGACTTCTAATGGACCACAGTCAACGGTATGCTCTGATTTACTAGAATATGTTGGTTTATGATAGAACCGAATAGTTGCAAGGTTGAGGATCAAATCATCAACTTTTGAGATGTTAATTTGATCAACTTTTGAGATGTTAATTGATGTCTTATCCACCGTTTAGATTGACCATTCAGATTGACCATCCCTATGGATGATATATGGTTTAAACAAATTTATATATGAATAGAGGTTTAAACAAATTTATATATGAATAGAGGCTAAATACAACCCTCGCTATCGGGCATTGTCATGTTTGTTTCTTATGTACAGTTCTCTTTGCAAAGAAATTTGCCACCTTGCAATTCCTACGAGGGGCATCATTTTTTTGTACAGACCTACTTGCCGATCAACTGTTCAAGAATTATGATTATGCTTGATTTTCCTGCAGTTTCCTCATATTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAATGGAAGAAGAACCCGTTTATGTAAATGCAAAGCAATATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGGTATTACATTTCATCGTAGTTGTATCACATTGTTACTTTTCTGCATACTCTAATCCATTTTGTGCAGCCATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCGAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAATGTTATTTCCAATACAGATAGGGAGGAAGGCATCAATTCTGGTGCAAACCATTCAACAAAACCTGTCGGCGAGGCTGGATCAAAGTACATGGTGGCTGATGAAAATGGAATCAAGGATACGCTTAACGAGGAGGACAAAGAGTTCATGACTCAAAATCTGCAGATAACACGTGCTTTCTTCAACGGAAAATTGAATGGCCATGGCATATCCACTTACACTTCACAACTTGCTGACGTCGAGGGAGGTCATCTCGATCAGCCACATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAATTGA

mRNA sequence

GCGAGCGAGGTAGAGAGAGAGAGAGAGTCATGGAACTGAGCTAGAAGACCAGAGAGACCTTCAACCTAAAGCTCCCTAGGGTACGATCGTCTCTTTCGTAATCACATCGCAGTTTATAAGTTTTGAACGATGCCATCAAAACCAGAAAATGTAGACCAACAAATAGTTGATGGGTCGAAGTATTTGGTACAATCGACCAAATACTCTGAGGCTTGGTGGAATGGAGTTGGGAACAATATCATCGCAGGTGAAGATGCTACCAAAACAGCTTCTGCAGAATACCTGAACGATACTGTTAGCAGTGGAGGAACGCAGTCACAAGCAAATGATGAAAATATTGGGAAAGAAGTTCAGCATCTCAAGTACATTCCGTTTTCTGCATCCCCACCTGTGGGCGAACGCCTTGATCTAAATTCCCAGATGGAACTTGTTGGCCACTCAATTGTTTTGACATCATATCCTTTTTCAGATGCACAATATTGCCAAATGCTGACTTCTAATGGACCACAGTCAACGTTTCCTCATATTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAATGGAAGAAGAACCCGTTTATGTAAATGCAAAGCAATATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCGAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAATGTTATTTCCAATACAGATAGGGAGGAAGGCATCAATTCTGGTGCAAACCATTCAACAAAACCTGTCGGCGAGGCTGGATCAAAGTACATGGTGGCTGATGAAAATGGAATCAAGGATACGCTTAACGAGGAGGACAAAGAGTTCATGACTCAAAATCTGCAGATAACACGTGCTTTCTTCAACGGAAAATTGAATGGCCATGGCATATCCACTTACACTTCACAACTTGCTGACGTCGAGGGAGGTCATCTCGATCAGCCACATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAATTGA

Coding sequence (CDS)

ATGCCATCAAAACCAGAAAATGTAGACCAACAAATAGTTGATGGGTCGAAGTATTTGGTACAATCGACCAAATACTCTGAGGCTTGGTGGAATGGAGTTGGGAACAATATCATCGCAGGTGAAGATGCTACCAAAACAGCTTCTGCAGAATACCTGAACGATACTGTTAGCAGTGGAGGAACGCAGTCACAAGCAAATGATGAAAATATTGGGAAAGAAGTTCAGCATCTCAAGTACATTCCGTTTTCTGCATCCCCACCTGTGGGCGAACGCCTTGATCTAAATTCCCAGATGGAACTTGTTGGCCACTCAATTGTTTTGACATCATATCCTTTTTCAGATGCACAATATTGCCAAATGCTGACTTCTAATGGACCACAGTCAACGTTTCCTCATATTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAATGGAAGAAGAACCCGTTTATGTAAATGCAAAGCAATATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCGAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAATGTTATTTCCAATACAGATAGGGAGGAAGGCATCAATTCTGGTGCAAACCATTCAACAAAACCTGTCGGCGAGGCTGGATCAAAGTACATGGTGGCTGATGAAAATGGAATCAAGGATACGCTTAACGAGGAGGACAAAGAGTTCATGACTCAAAATCTGCAGATAACACGTGCTTTCTTCAACGGAAAATTGAATGGCCATGGCATATCCACTTACACTTCACAACTTGCTGACGTCGAGGGAGGTCATCTCGATCAGCCACATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAATTGA

Protein sequence

MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQPHESMQVNGAPQRAIPIN
Homology
[Close]
BLAST of Carg18672 vs. NCBI nr
Match: XP_022953565.1 (nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita moschata] >XP_022953566.1 nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 626.3 bits (1614), Expect = 5.6e-176
Identity = 311/317 (98.11%), Postives = 312/317 (98.42%), Query Frame = 0 

Query: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGG 60
           MPSKPENVDQQIVDGSKYLVQSTKYS AWWNGVGNN IAGEDATKTASA+YLNDTVSSGG
Sbjct: 1   MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGG 60

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQSQ NDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 61  TQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120

Query: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPV EAGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGS 240

Query: 241 KYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300
           KYM ADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Sbjct: 241 KYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300

Query: 301 HESMQVNGAPQRAIPIN 318
           HESMQVNGAPQRAIPIN
Sbjct: 301 HESMQVNGAPQRAIPIN 317

[Close]
BLAST of Carg18672 vs. NCBI nr
Match: XP_023547827.1 (nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 624.4 bits (1609), Expect = 2.1e-175
Identity = 310/317 (97.79%), Postives = 312/317 (98.42%), Query Frame = 0 

Query: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGG 60
           MPSKPENVDQQIVDGSKYLVQSTKYSEAWW+GVGNN IAGEDATKTASA+YLNDTVSSGG
Sbjct: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWHGVGNNTIAGEDATKTASADYLNDTVSSGG 60

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQSQANDENIGKEVQHLKYIPFS SPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 61  TQSQANDENIGKEVQHLKYIPFSTSPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120

Query: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSG NHSTKPV EAGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGTNHSTKPVNEAGS 240

Query: 241 KYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300
           KYM ADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Sbjct: 241 KYMGADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300

Query: 301 HESMQVNGAPQRAIPIN 318
           HESMQVNGAPQRAIPIN
Sbjct: 301 HESMQVNGAPQRAIPIN 317

[Close]
BLAST of Carg18672 vs. NCBI nr
Match: XP_022991913.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima] >XP_022991914.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 614.8 bits (1584), Expect = 1.7e-172
Identity = 305/317 (96.21%), Postives = 309/317 (97.48%), Query Frame = 0 

Query: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGG 60
           MPSKPENVDQQ VDGSKYLVQSTKYSEAWW+GVGNN IAGE+ATKTAS +YLNDTVSSGG
Sbjct: 1   MPSKPENVDQQTVDGSKYLVQSTKYSEAWWHGVGNNTIAGENATKTASTDYLNDTVSSGG 60

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQSQANDENIGKEVQHLKYIPFS SPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 61  TQSQANDENIGKEVQHLKYIPFSTSPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120

Query: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDRE+GIN GANH TKPV EAGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREKGINFGANHPTKPVNEAGS 240

Query: 241 KYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300
           KYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEG HLDQP
Sbjct: 241 KYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGDHLDQP 300

Query: 301 HESMQVNGAPQRAIPIN 318
           HESMQVNGAPQRAIPIN
Sbjct: 301 HESMQVNGAPQRAIPIN 317

[Close]
BLAST of Carg18672 vs. NCBI nr
Match: XP_023547824.1 (uncharacterized protein LOC111806677 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023547825.1 uncharacterized protein LOC111806677 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023547826.1 uncharacterized protein LOC111806677 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 608.2 bits (1567), Expect = 1.6e-170
Identity = 310/348 (89.08%), Postives = 312/348 (89.66%), Query Frame = 0 

Query: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGG 60
           MPSKPENVDQQIVDGSKYLVQSTKYSEAWW+GVGNN IAGEDATKTASA+YLNDTVSSGG
Sbjct: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWHGVGNNTIAGEDATKTASADYLNDTVSSGG 60

Query: 61  TQSQAN-------------------------------DENIGKEVQHLKYIPFSASPPVG 120
           TQSQAN                               DENIGKEVQHLKYIPFS SPPVG
Sbjct: 61  TQSQANGIRFIAIIVINSIYLTKNTQFKRYIEPVLDLDENIGKEVQHLKYIPFSTSPPVG 120

Query: 121 ERLDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEE 180
           ERLDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEE
Sbjct: 121 ERLDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEE 180

Query: 181 EPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTK 240
           EPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTK
Sbjct: 181 EPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTK 240

Query: 241 KPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQIT 300
           KPNNVISNTDREEGINSG NHSTKPV EAGSKYM ADENGIKDTLNEEDKEFMTQNLQIT
Sbjct: 241 KPNNVISNTDREEGINSGTNHSTKPVNEAGSKYMGADENGIKDTLNEEDKEFMTQNLQIT 300

Query: 301 RAFFNGKLNGHGISTYTSQLADVEGGHLDQPHESMQVNGAPQRAIPIN 318
           RAFFNGKLNGHGISTYTSQLADVEGGHLDQPHESMQVNGAPQRAIPIN
Sbjct: 301 RAFFNGKLNGHGISTYTSQLADVEGGHLDQPHESMQVNGAPQRAIPIN 348

[Close]
BLAST of Carg18672 vs. NCBI nr
Match: XP_022953567.1 (nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 563.1 bits (1450), Expect = 5.8e-157
Identity = 287/317 (90.54%), Postives = 288/317 (90.85%), Query Frame = 0 

Query: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGG 60
           MPSKPENVDQQIVDGSKYLVQSTKYS AWWNGVGNN IAGEDATKTASA+YLNDTVSSGG
Sbjct: 1   MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGG 60

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQSQ NDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSI               
Sbjct: 61  TQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSI--------------- 120

Query: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
                    FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 ---------FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPV EAGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGS 240

Query: 241 KYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300
           KYM ADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Sbjct: 241 KYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 293

Query: 301 HESMQVNGAPQRAIPIN 318
           HESMQVNGAPQRAIPIN
Sbjct: 301 HESMQVNGAPQRAIPIN 293

[Close]
BLAST of Carg18672 vs. TAIR10
Match: AT3G20910.1 (nuclear factor Y, subunit A9)

HSP 1 Score: 133.7 bits (335), Expect = 2.1e-31
Identity = 90/212 (42.45%), Postives = 123/212 (58.02%), Query Frame = 0 

Query: 35  NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDL 94
           +++ AG+ ++K+ +       + S G++S +N +N   +   +   P SA    G+  D 
Sbjct: 46  SSVEAGDKSSKSIAL-----ALESNGSKSPSNRDNTVNKESQVTTSPQSA----GDYSDK 105

Query: 95  NSQM------------ELVGHSI-VLTSYPFSDAQYCQMLTSNG--PQSTFPHIYGLHHA 154
           N +             +LVGH++   +S P+ D  Y  ++ + G  P    P+  G+ H+
Sbjct: 106 NQESLHHGITQPPPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPY-GGMPHS 165

Query: 155 RMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR 214
           RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR R
Sbjct: 166 RMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPR 225

Query: 215 GSGGRFLNTKKPNNVISNTDREEGINSGANHS 232
           G+GGRF   KK N   S    EE  N     S
Sbjct: 226 GTGGRF--AKKTNTEASKRKAEEKSNGHVTQS 245

[Close]
BLAST of Carg18672 vs. TAIR10
Match: AT5G12840.1 (nuclear factor Y, subunit A1)

HSP 1 Score: 129.8 bits (325), Expect = 3.0e-30
Identity = 105/280 (37.50%), Postives = 136/280 (48.57%), Query Frame = 0 

Query: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWW--NGVG-------NNIIAGEDATKTASAEY 60
           M SKP   +++ V+    + Q   Y+E WW  N  G       + I +   +    +   
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 61  LNDTVSSGGTQSQANDENIG--KEVQ------HLKYIPFSASPPVGERLDLNSQ-----M 120
            ND V S       N EN G  K+ Q       +       + P     +++ Q      
Sbjct: 61  SND-VHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 ELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAK 180
           ELVGH I     P+ D  Y  ++ + G Q   F    G+   R  LPL+M +EPVYVNAK
Sbjct: 121 ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAK 180

Query: 181 QYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVI 240
           QY GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF      +     
Sbjct: 181 QYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDA 240

Query: 241 SNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLN 256
              DRE G  S  N S       GS+ +  D N   +TLN
Sbjct: 241 GGRDRERG--SATNSS-------GSEQVETDSN---ETLN 267

[Close]
BLAST of Carg18672 vs. TAIR10
Match: AT1G30500.2 (nuclear factor Y, subunit A7)

HSP 1 Score: 119.4 bits (298), Expect = 4.0e-27
Identity = 63/110 (57.27%), Postives = 75/110 (68.18%), Query Frame = 0 

Query: 103 HSIVLTSYPFSDAQYCQMLTSNGPQSTFPH--IYGLHHARMPLPLEMEEEPVYVNAKQYH 162
           +S+    YP+ D  Y  +        T  H  + G+    +PLP +  EEPV+VNAKQYH
Sbjct: 51  NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110

Query: 163 GILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK 211
           GILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR RG GGRFLN KK
Sbjct: 111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKK 160

[Close]
BLAST of Carg18672 vs. TAIR10
Match: AT2G34720.1 (nuclear factor Y, subunit A4)

HSP 1 Score: 119.4 bits (298), Expect = 4.0e-27
Identity = 72/159 (45.28%), Postives = 90/159 (56.60%), Query Frame = 0 

Query: 63  SQANDENIGKEVQHLKYIPFSASPPVGERLDLNS-QMELVGHSIVLTSYPFSDAQYCQML 122
           S  N+ +  KE    +  P   S    E +D NS   E + H +    YP+ D  Y  + 
Sbjct: 9   SDNNESHAKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHGL----YPYPDPYYRSVF 68

Query: 123 TSNGPQSTFPHIY--------GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE 182
                Q+  PH Y        G+    +PL  +  EEPV+VNAKQYHGILRRRQSRAK E
Sbjct: 69  AQ---QAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLE 128

Query: 183 LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPN 213
              + IK++KPY+HESRHLHA+RR RG GGRFLN KK N
Sbjct: 129 ARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKEN 160

[Close]
BLAST of Carg18672 vs. TAIR10
Match: AT3G05690.1 (nuclear factor Y, subunit A2)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-26
Identity = 91/255 (35.69%), Postives = 127/255 (49.80%), Query Frame = 0 

Query: 28  AWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKY------IP 87
           +WW   G+  +A E      S  +    V S G   Q  D+       HL +       P
Sbjct: 17  SWWTAFGSQPLAPESLAGD-SDSFAGVKVGSVGETGQRVDKQ-SNSATHLAFSLGDVKSP 76

Query: 88  FSASPPVGERLDLNSQMELVGHS--IVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHA 147
                P G    + S    +G S   + T YP+ + QY  ++++ G QS           
Sbjct: 77  RLVPKPHGATFSMQSPCLELGFSQPPIYTKYPYGEQQYYGVVSAYGSQS---------RV 136

Query: 148 RMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAM 207
            +PL +E E+  +YVN+KQYHGI+RRRQSRAKA   L++K + S  RKPY+H SRHLHA+
Sbjct: 137 MLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHAL 196

Query: 208 RRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSK--YMVADENG---I 266
           RR RGSGGRFLNTK  N   S T+ ++G  S    S     ++ S+   +V  ENG   +
Sbjct: 197 RRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQNSEVVHPENGTMNL 256

[Close]
BLAST of Carg18672 vs. Swiss-Prot
Match: sp|Q945M9|NFYA9_ARATH (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.7e-30
Identity = 90/212 (42.45%), Postives = 123/212 (58.02%), Query Frame = 0 

Query: 35  NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDL 94
           +++ AG+ ++K+ +       + S G++S +N +N   +   +   P SA    G+  D 
Sbjct: 46  SSVEAGDKSSKSIAL-----ALESNGSKSPSNRDNTVNKESQVTTSPQSA----GDYSDK 105

Query: 95  NSQM------------ELVGHSI-VLTSYPFSDAQYCQMLTSNG--PQSTFPHIYGLHHA 154
           N +             +LVGH++   +S P+ D  Y  ++ + G  P    P+  G+ H+
Sbjct: 106 NQESLHHGITQPPPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPY-GGMPHS 165

Query: 155 RMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR 214
           RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR R
Sbjct: 166 RMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPR 225

Query: 215 GSGGRFLNTKKPNNVISNTDREEGINSGANHS 232
           G+GGRF   KK N   S    EE  N     S
Sbjct: 226 GTGGRF--AKKTNTEASKRKAEEKSNGHVTQS 245

[Close]
BLAST of Carg18672 vs. Swiss-Prot
Match: sp|Q9LXV5|NFYA1_ARATH (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.4e-29
Identity = 105/280 (37.50%), Postives = 136/280 (48.57%), Query Frame = 0 

Query: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWW--NGVG-------NNIIAGEDATKTASAEY 60
           M SKP   +++ V+    + Q   Y+E WW  N  G       + I +   +    +   
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 61  LNDTVSSGGTQSQANDENIG--KEVQ------HLKYIPFSASPPVGERLDLNSQ-----M 120
            ND V S       N EN G  K+ Q       +       + P     +++ Q      
Sbjct: 61  SND-VHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 ELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAK 180
           ELVGH I     P+ D  Y  ++ + G Q   F    G+   R  LPL+M +EPVYVNAK
Sbjct: 121 ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAK 180

Query: 181 QYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVI 240
           QY GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF      +     
Sbjct: 181 QYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDA 240

Query: 241 SNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLN 256
              DRE G  S  N S       GS+ +  D N   +TLN
Sbjct: 241 GGRDRERG--SATNSS-------GSEQVETDSN---ETLN 267

[Close]
BLAST of Carg18672 vs. Swiss-Prot
Match: sp|Q8VY64|NFYA4_ARATH (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.3e-26
Identity = 72/159 (45.28%), Postives = 90/159 (56.60%), Query Frame = 0 

Query: 63  SQANDENIGKEVQHLKYIPFSASPPVGERLDLNS-QMELVGHSIVLTSYPFSDAQYCQML 122
           S  N+ +  KE    +  P   S    E +D NS   E + H +    YP+ D  Y  + 
Sbjct: 9   SDNNESHAKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHGL----YPYPDPYYRSVF 68

Query: 123 TSNGPQSTFPHIY--------GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE 182
                Q+  PH Y        G+    +PL  +  EEPV+VNAKQYHGILRRRQSRAK E
Sbjct: 69  AQ---QAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLE 128

Query: 183 LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPN 213
              + IK++KPY+HESRHLHA+RR RG GGRFLN KK N
Sbjct: 129 ARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKEN 160

[Close]
BLAST of Carg18672 vs. Swiss-Prot
Match: sp|Q84JP1|NFYA7_ARATH (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.3e-26
Identity = 63/110 (57.27%), Postives = 75/110 (68.18%), Query Frame = 0 

Query: 103 HSIVLTSYPFSDAQYCQMLTSNGPQSTFPH--IYGLHHARMPLPLEMEEEPVYVNAKQYH 162
           +S+    YP+ D  Y  +        T  H  + G+    +PLP +  EEPV+VNAKQYH
Sbjct: 51  NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110

Query: 163 GILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK 211
           GILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR RG GGRFLN KK
Sbjct: 111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKK 160

[Close]
BLAST of Carg18672 vs. Swiss-Prot
Match: sp|Q9M9X4|NFYA2_ARATH (Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NFYA2 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.6e-25
Identity = 91/255 (35.69%), Postives = 127/255 (49.80%), Query Frame = 0 

Query: 28  AWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKY------IP 87
           +WW   G+  +A E      S  +    V S G   Q  D+       HL +       P
Sbjct: 17  SWWTAFGSQPLAPESLAGD-SDSFAGVKVGSVGETGQRVDKQ-SNSATHLAFSLGDVKSP 76

Query: 88  FSASPPVGERLDLNSQMELVGHS--IVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHA 147
                P G    + S    +G S   + T YP+ + QY  ++++ G QS           
Sbjct: 77  RLVPKPHGATFSMQSPCLELGFSQPPIYTKYPYGEQQYYGVVSAYGSQS---------RV 136

Query: 148 RMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAM 207
            +PL +E E+  +YVN+KQYHGI+RRRQSRAKA   L++K + S  RKPY+H SRHLHA+
Sbjct: 137 MLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHAL 196

Query: 208 RRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSK--YMVADENG---I 266
           RR RGSGGRFLNTK  N   S T+ ++G  S    S     ++ S+   +V  ENG   +
Sbjct: 197 RRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQNSEVVHPENGTMNL 256

[Close]
BLAST of Carg18672 vs. TrEMBL
Match: tr|A0A0A0K612|A0A0A0K612_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428130 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 2.3e-154
Identity = 273/316 (86.39%), Postives = 293/316 (92.72%), Query Frame = 0 

Query: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGG 60
           MPS+PENVDQQ+ DG+KYL+QSTK+SE WW+GVGNN IAGEDA KT+SAEYLN TV+SG 
Sbjct: 2   MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQ QANDENIGKEVQHLKYIPFS SPPVGE LDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTS GPQ+T P IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNV+SNT+REE I+S ANHSTKPV EA S
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVS 241

Query: 241 KYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300
           KYMV +E GIK+TL+E+ +EFMTQN+QIT AFFNGK N HG+STY+SQL DVEGGHLDQP
Sbjct: 242 KYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP 301

Query: 301 HESMQVNGAPQRAIPI 317
           HESMQVNGAPQRAIPI
Sbjct: 302 HESMQVNGAPQRAIPI 317

[Close]
BLAST of Carg18672 vs. TrEMBL
Match: tr|A0A1S3CED9|A0A1S3CED9_CUCME (nuclear transcription factor Y subunit A-9-like OS=Cucumis melo OX=3656 GN=LOC103499928 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 5.2e-154
Identity = 272/316 (86.08%), Postives = 289/316 (91.46%), Query Frame = 0 

Query: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGG 60
           MPS+PENVDQQ+ D +KYL+QS+KYSE WW+GVGNN IAGEDA KT+SAEYLN TV+SG 
Sbjct: 2   MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQ QANDENIGKEVQHLKYIPFS SPPVGE LDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTS GPQ+T P IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNV+SNT+REE INSGANHSTKPV E GS
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS 241

Query: 241 KYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300
           KYMV  E GIK+TL+E+ +E MTQN+QIT AFFNGK N HG+STY SQL DVEGGHLD P
Sbjct: 242 KYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP 301

Query: 301 HESMQVNGAPQRAIPI 317
           HESMQVNGAPQRAIPI
Sbjct: 302 HESMQVNGAPQRAIPI 317

[Close]
BLAST of Carg18672 vs. TrEMBL
Match: tr|A0A2I4EBM2|A0A2I4EBM2_9ROSI (nuclear transcription factor Y subunit A-1-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108988110 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.8e-80
Identity = 179/334 (53.59%), Postives = 219/334 (65.57%), Query Frame = 0 

Query: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGG 60
           MP+KP N D ++  G + ++QS  YS+ WW GVG+N+  G++A+K+ S E+LN +V +G 
Sbjct: 2   MPAKPGNEDGRLEHGGQTVLQSATYSQPWWRGVGSNVSLGDNASKSTSMEHLNVSVGNGA 61

Query: 61  TQSQAN--------------DENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIV 120
            Q + N              D NIGKE +    +P S +P + E LD NSQMELVGHSIV
Sbjct: 62  MQLKVNGPLDDGAKFNKETRDGNIGKEHRDNNRVP-SLTPKMVEHLDPNSQMELVGHSIV 121

Query: 121 LTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRR 180
           LTSYP+SD QY  M  S GPQ+  P +YG+HHARMPLPLEMEEEPVYVNAKQYHGILRRR
Sbjct: 122 LTSYPYSDQQYGGMFASYGPQAMIPELYGMHHARMPLPLEMEEEPVYVNAKQYHGILRRR 181

Query: 181 QSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINS 240
           QSRAKAELEKK+IK RKPYLHESRHLHAMRRARG GGRFLNTKK +N +S+   EEG+N 
Sbjct: 182 QSRAKAELEKKMIKVRKPYLHESRHLHAMRRARGCGGRFLNTKKLDN-LSDPPSEEGMNM 241

Query: 241 GANHSTKPVGEAGSKYMVADENGIK-DTLNEEDKEF-MTQNLQITRAFFNGKLNGHGI-S 300
           GA  S  P   +GSK    + NG    +LN+      +  N      F  G  + +G+ S
Sbjct: 242 GAKPSMGPTISSGSKCFFNNGNGNSGSSLNQHKGSLPIVHNTHGAHCFSKGNSSSNGLSS 301

Query: 301 TYTSQLAD-VEGGHLDQPHESMQVNGAPQRAIPI 317
           TY S  +D  E   L Q  ESMQVNG    A+PI
Sbjct: 302 TYHSLFSDGKEVDCLGQQRESMQVNGVAHGALPI 333

[Close]
BLAST of Carg18672 vs. TrEMBL
Match: tr|A0A2I4EBK9|A0A2I4EBK9_9ROSI (nuclear transcription factor Y subunit A-1-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108988110 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.9e-79
Identity = 179/341 (52.49%), Postives = 220/341 (64.52%), Query Frame = 0 

Query: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSG- 60
           MP+KP N D ++  G + ++QS  YS+ WW GVG+N+  G++A+K+ S E+LN +V +G 
Sbjct: 2   MPAKPGNEDGRLEHGGQTVLQSATYSQPWWRGVGSNVSLGDNASKSTSMEHLNVSVGNGA 61

Query: 61  --------------------GTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQME 120
                               GT +  +D NIGKE +    +P S +P + E LD NSQME
Sbjct: 62  MQLKVNGPLDDGAKFNKETRGTVASKSDGNIGKEHRDNNRVP-SLTPKMVEHLDPNSQME 121

Query: 121 LVGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQY 180
           LVGHSIVLTSYP+SD QY  M  S GPQ+  P +YG+HHARMPLPLEMEEEPVYVNAKQY
Sbjct: 122 LVGHSIVLTSYPYSDQQYGGMFASYGPQAMIPELYGMHHARMPLPLEMEEEPVYVNAKQY 181

Query: 181 HGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTD 240
           HGILRRRQSRAKAELEKK+IK RKPYLHESRHLHAMRRARG GGRFLNTKK +N +S+  
Sbjct: 182 HGILRRRQSRAKAELEKKMIKVRKPYLHESRHLHAMRRARGCGGRFLNTKKLDN-LSDPP 241

Query: 241 REEGINSGANHSTKPVGEAGSKYMVADENGIK-DTLNEEDKEF-MTQNLQITRAFFNGKL 300
            EEG+N GA  S  P   +GSK    + NG    +LN+      +  N      F  G  
Sbjct: 242 SEEGMNMGAKPSMGPTISSGSKCFFNNGNGNSGSSLNQHKGSLPIVHNTHGAHCFSKGNS 301

Query: 301 NGHGI-STYTSQLAD-VEGGHLDQPHESMQVNGAPQRAIPI 317
           + +G+ STY S  +D  E   L Q  ESMQVNG    A+PI
Sbjct: 302 SSNGLSSTYHSLFSDGKEVDCLGQQRESMQVNGVAHGALPI 340

[Close]
BLAST of Carg18672 vs. TrEMBL
Match: tr|D7T311|D7T311_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0064g00860 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.6e-78
Identity = 174/345 (50.43%), Postives = 218/345 (63.19%), Query Frame = 0 

Query: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIA----GEDATKTASAEYLNDTV 60
           MP+KP+  D++I  G K    ST YS+ WW+GVGNN I+    G   +K+ S E+LN  +
Sbjct: 60  MPTKPKIEDRRIEPGGKSNPSSTVYSQPWWHGVGNNAISPAALGGSPSKSTSVEHLNSHI 119

Query: 61  SSGGTQSQAN---------------------DENIGKEVQHLKYIPFSASPPVGERLDLN 120
           +S G Q QAN                     D   G+E QHL     S  P + E L+ N
Sbjct: 120 TSNGFQLQANGRLDDGTTFNKGTQPTVALQSDGRNGQEHQHLNPTASSTLPIMSEHLEPN 179

Query: 121 SQMELVGHSIVLTSYPFSDAQYCQMLTSNGPQS-TFPHIYGLHHARMPLPLEMEEEPVYV 180
           SQMELVGHSIVLTSYP+ D     ++TS GPQ+   PH++G+H  RMPLPLEMEEEPVYV
Sbjct: 180 SQMELVGHSIVLTSYPYQDPHNVGIMTSYGPQAMVHPHLFGMHQPRMPLPLEMEEEPVYV 239

Query: 181 NAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNV 240
           NAKQYHGILRRRQSRAKAELEKK IK RKPYLHESRH HAMRRARG GGRFLNTKK +N 
Sbjct: 240 NAKQYHGILRRRQSRAKAELEKKAIKVRKPYLHESRHQHAMRRARGCGGRFLNTKKLDNN 299

Query: 241 ISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKD--TLNEEDKEFMTQNLQITRAF 300
            +NT  E+G  SGA  ST+    +GS+++  + +   D  ++ +E+K    Q++     +
Sbjct: 300 DANTTAEKGSVSGAALSTQSASSSGSEHLPTNSSRNLDSSSVQQEEKGRTIQDMLEAHTY 359

Query: 301 FNGKLNGHGIST-YTSQLADVEGGHLDQPHESMQVNGAPQRAIPI 317
            NG  NGHG+S+ Y S      G    QP E+MQ+N AP RA+PI
Sbjct: 360 SNGNRNGHGLSSAYHSSNGSEGGDCFGQPRENMQLNTAPHRALPI 404

The following BLAST results are available for this feature:
BLAST of Carg18672 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022953565.15.6e-17698.11nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita moschata] ... [more]
XP_023547827.12.1e-17597.79nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp... [more]
XP_022991913.11.7e-17296.21nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima] >X... [more]
XP_023547824.11.6e-17089.08uncharacterized protein LOC111806677 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022953567.15.8e-15790.54nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita moschata][more]
BLAST of Carg18672 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G20910.12.1e-3142.45nuclear factor Y, subunit A9[more]
AT5G12840.13.0e-3037.50nuclear factor Y, subunit A1[more]
AT1G30500.24.0e-2757.27nuclear factor Y, subunit A7[more]
AT2G34720.14.0e-2745.28nuclear factor Y, subunit A4[more]
AT3G05690.12.0e-2635.69nuclear factor Y, subunit A2[more]
BLAST of Carg18672 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q945M9|NFYA9_ARATH3.7e-3042.45Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
sp|Q9LXV5|NFYA1_ARATH5.4e-2937.50Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
sp|Q8VY64|NFYA4_ARATH7.3e-2645.28Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
sp|Q84JP1|NFYA7_ARATH7.3e-2657.27Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
sp|Q9M9X4|NFYA2_ARATH3.6e-2535.69Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
BLAST of Carg18672 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K612|A0A0A0K612_CUCSA2.3e-15486.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428130 PE=4 SV=1[more]
tr|A0A1S3CED9|A0A1S3CED9_CUCME5.2e-15486.08nuclear transcription factor Y subunit A-9-like OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2I4EBM2|A0A2I4EBM2_9ROSI3.8e-8053.59nuclear transcription factor Y subunit A-1-like isoform X2 OS=Juglans regia OX=5... [more]
tr|A0A2I4EBK9|A0A2I4EBK9_9ROSI1.9e-7952.49nuclear transcription factor Y subunit A-1-like isoform X1 OS=Juglans regia OX=5... [more]
tr|D7T311|D7T311_VITVI4.6e-7850.43Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0064g00860 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0016602CCAAT-binding factor complex
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR018362CCAAT-binding_factor_CS
IPR001289NFYA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016602 CCAAT-binding factor complex
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18672-RACarg18672-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001289Nuclear transcription factor Y subunit APRINTSPR00616CCAATSUBUNTBcoord: 151..173
score: 77.29
coord: 182..205
score: 81.71
IPR001289Nuclear transcription factor Y subunit ASMARTSM00521cbf3coord: 147..208
e-value: 7.9E-38
score: 141.7
IPR001289Nuclear transcription factor Y subunit APFAMPF02045CBFB_NFYAcoord: 150..205
e-value: 1.2E-26
score: 92.9
IPR001289Nuclear transcription factor Y subunit APANTHERPTHR12632TRANSCRIPTION FACTOR NF-Y ALPHA-RELATEDcoord: 59..293
IPR001289Nuclear transcription factor Y subunit APROSITEPS51152NFYA_HAP2_2coord: 148..208
score: 39.152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..233
NoneNo IPR availablePANTHERPTHR12632:SF14NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATEDcoord: 59..293
IPR018362CCAAT-binding factor, conserved sitePROSITEPS00686NFYA_HAP2_1coord: 153..173

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18672Cla015244Watermelon (97103) v1carwmB0344
Carg18672Csa7G428130Cucumber (Chinese Long) v2carcuB0387
Carg18672MELO3C023554Melon (DHL92) v3.5.1carmeB0359
Carg18672ClCG09G004120Watermelon (Charleston Gray)carwcgB0345
Carg18672CSPI07G19220Wild cucumber (PI 183967)carcpiB0391
Carg18672Cucsa.127910Cucumber (Gy14) v1carcgyB0415
Carg18672CmaCh08G005260Cucurbita maxima (Rimu)carcmaB0499
Carg18672CmaCh17G009550Cucurbita maxima (Rimu)carcmaB0497
Carg18672CmoCh08G005170Cucurbita moschata (Rifu)carcmoB0482
Carg18672CmoCh17G009310Cucurbita moschata (Rifu)carcmoB0480
Carg18672Lsi02G025720Bottle gourd (USVL1VR-Ls)carlsiB321
Carg18672Cp4.1LG12g06840Cucurbita pepo (Zucchini)carcpeB0493
Carg18672Cp4.1LG17g08050Cucurbita pepo (Zucchini)carcpeB0494
Carg18672CsGy7G017580Cucumber (Gy14) v2carcgybB0366
Carg18672MELO3C023554.2Melon (DHL92) v3.6.1carmedB0364
Carg18672CsaV3_7G031020Cucumber (Chinese Long) v3carcucB0390
Carg18672Cla97C09G166390Watermelon (97103) v2carwmbB0370
Carg18672Bhi10G000228Wax gourdcarwgoB0438
Carg18672Bhi09G000535Wax gourdcarwgoB0439
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg18672Carg17969Silver-seed gourdcarcarB207
Carg18672Carg13440Silver-seed gourdcarcarB379
Carg18672Carg16939Silver-seed gourdcarcarB380
Carg18672Carg06900Silver-seed gourdcarcarB381
The following block(s) are covering this gene:
GeneOrganismBlock
Carg18672Silver-seed gourdcarcarB288
Carg18672Cucumber (Gy14) v2carcgybB0365
Carg18672Cucurbita maxima (Rimu)carcmaB0496
Carg18672Cucurbita moschata (Rifu)carcmoB0479
Carg18672Wild cucumber (PI 183967)carcpiB0390
Carg18672Cucumber (Chinese Long) v2carcuB0386
Carg18672Cucumber (Chinese Long) v3carcucB0389
Carg18672Bottle gourd (USVL1VR-Ls)carlsiB322
Carg18672Melon (DHL92) v3.5.1carmeB0360
Carg18672Melon (DHL92) v3.6.1carmedB0365
Carg18672Watermelon (Charleston Gray)carwcgB0347
Carg18672Watermelon (Charleston Gray)carwcgB0346
Carg18672Watermelon (97103) v1carwmB0345
Carg18672Watermelon (97103) v1carwmB0346
Carg18672Watermelon (97103) v2carwmbB0369
Carg18672Watermelon (97103) v2carwmbB0371
Carg18672Wax gourdcarwgoB0437