Carg13440 (gene) Silver-seed gourd

Overview
NameCarg13440
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionnuclear transcription factor Y subunit A-9-like
LocationCucurbita_argyrosperma_scaffold_049 : 484728 .. 486793 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATAGAACTAGGCAAGTGTGAAATCAAAAATCGGTTGGGGAAGAGAACGAAACATTCTTTTTAAGGGCGTGTAAACCTCTCCGTAGTAGATGCATTTTTAAAACGTTGAAGGAAGCCCAAAAGAAAAATCAAAAGAAGACAATATTTGCTAGTGATAGGCTTGGGCCATTACAGTAAGATCGTGTCCCCCTGTTGTTTATGCGCTTGAATCTTCAGATGAACAATAATTTAAACCCTCGACTACTTTGGAGAAGGCTCGGACTTTTTTTAGAGCAGCCCCAAACCATGGAATCCGGTGTGGTATAAGTAGAAGTGATTTATATTGTTTTTGTTTCTAATGTTCTTCCTTTTGGGGTGGCAGAACAAGTTTCAAACAATGCCCTCAAAACCAGGAATTGTAGAACAAGAAGTTGCTGATGGGGCGAAGTATTTGCTGCAATCAACCAAATACTCTGAGCCTTGGTGGCATGGCGTTGGAAACAATACCATCACTGATGAAGATGCTACCAAAACATCTTCTGCTGAATACCTGAACGTTACTGTTACCAGTGCAGCTATGCTTTCACAAGCAAATGGTATTAGTTAATTTAATATGCTTCCTATGAACACAATTTAAGCAACATGTTGAAACTTTTCTTGGGTCAGATGAAAATACTGGGAAAGAAGTTCAGCATCTCAAGTACATTCCATTTTCGACATCCCCACCCGTGGGCGAACGCCTAGATCCAAATTCCCAGATGGAACTTGTTGGCCACTCGATTGTAAGAACGAACTGTCTATCTTTCTCTCTGAAATCAATGTATATGAGTAGGTGCCTAAGTTCTTCATTCGTCTGCAATGACTAATCAATATATTTCTTCCCTCGAAGAAATAGATATTTGGGAATTTAGACTTTGTTTTTCTCTTTACTGGATTTCAAAAGAACTTCAAGGATCTCCATTTGCAGGTTTTGACATCATATCCTTTTTCAGATGCACAATGTTGTCAAATGCTGACTTCATATGGACCACAAACAACGGTATGCTCTGATCTCTGGTACAGTTTCTTTTGCTAATTTATATGATCAGTTGCCTTGCACAGAAACGAAAGGCAACATACCAGGGTACTCATCTGTGTTTATTATGTATTGTTGAAATTTATTTGGTACGAACCGACGCTAAATGCGTACTTCTTAGGCCCATCATATATCCTTGTCATGTTTGTTTCTTGCAATTATTATGATATATTGTTTAACTCTGAGTTCTACTGAACAAGAATGCATATAAGAATAGGGGATCCTTTTGTATAGATCCTACTTGCTGATTGGCTGTTCAAGGATTATGATTATACTTGATTTCCCTGCAGTTACCTCATTTTTATGGACTTCACCATGCTAGGATGCCATTACCCCTTGAAATGGAAGCAGAGCCTGTTTATGTGAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGGTATAGCAGCTAACTTGTTTCATTCAAGGACTAAGCGGACCAAAAATGAACACTTTAGTTATTGAAATAAACTTTTGCTAGAAGTTGTCTTTCTGTTCTTATCGATATTACAATTGATCATAGTTGTATCCCCTCATTTCGTTTTCTGGATACTCTTTTCCATTTTGTGCAGCCATATCTTCATGAATCCAGACATCTCCATGCTATGAGACGAGCAAGAGGCAGCGGAGGACGTTTCCTGAATACCAAAAAGCCGAACAGTGTTATTTCCAATAAAACTATGGAGGAAGACATCAATTCTGGTATCAACCATGTATCAGAACCTGTCAGTGAGGGTGGATCAAATTACATGGTGGCTAATGAAAATGGAATGAAGGATACACTTGATGATCAACAAAAGGAGGACAAAGAGTTCATGCCTCAAAATATGCAGATAACACACGCTTTCTTCAATGGTGGAAAGTCGAATGGCCATGGTTTATCCACATACAATTCAAAACTTGCTGATGAAAGCATGCAGGTGAATGCGGCTCCACAGAGGGCCATCCCCATCAAGTGA

mRNA sequence

TTATAGAACTAGGCAAGTGTGAAATCAAAAATCGGTTGGGGAAGAGAACGAAACATTCTTTTTAAGGGCGTGTAAACCTCTCCGTAGTAGATGCATTTTTAAAACGTTGAAGGAAGCCCAAAAGAAAAATCAAAAGAAGACAATATTTGCTAGTGATAGGCTTGGGCCATTACAGTAAGATCGTGTCCCCCTGTTGTTTATGCGCTTGAATCTTCAGATGAACAATAATTTAAACCCTCGACTACTTTGGAGAAGGCTCGGACTTTTTTTAGAGCAGCCCCAAACCATGGAATCCGGTGTGGTATAAGTAGAAGTGATTTATATTGTTTTTGTTTCTAATGTTCTTCCTTTTGGGGTGGCAGAACAAGTTTCAAACAATGCCCTCAAAACCAGGAATTGTAGAACAAGAAGTTGCTGATGGGGCGAAGTATTTGCTGCAATCAACCAAATACTCTGAGCCTTGGTGGCATGGCGTTGGAAACAATACCATCACTGATGAAGATGCTACCAAAACATCTTCTGCTGAATACCTGAACGTTACTGTTACCAGTGCAGCTATGCTTTCACAAGCAAATGATGAAAATACTGGGAAAGAAGTTCAGCATCTCAAGTACATTCCATTTTCGACATCCCCACCCGTGGGCGAACGCCTAGATCCAAATTCCCAGATGGAACTTGTTGGCCACTCGATTGTTTTGACATCATATCCTTTTTCAGATGCACAATGTTGTCAAATGCTGACTTCATATGGACCACAAACAACGTTACCTCATTTTTATGGACTTCACCATGCTAGGATGCCATTACCCCTTGAAATGGAAGCAGAGCCTGTTTATGTGAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCATATCTTCATGAATCCAGACATCTCCATGCTATGAGACGAGCAAGAGGCAGCGGAGGACGTTTCCTGAATACCAAAAAGCCGAACAGTGTTATTTCCAATAAAACTATGGAGGAAGACATCAATTCTGGTATCAACCATGTATCAGAACCTGTCAGTGAGGGTGGATCAAATTACATGGTGGCTAATGAAAATGGAATGAAGGATACACTTGATGATCAACAAAAGGAGGACAAAGAGTTCATGCCTCAAAATATGCAGATAACACACGCTTTCTTCAATGGTGGAAAGTCGAATGGCCATGGTTTATCCACATACAATTCAAAACTTGCTGATGAAAGCATGCAGGTGAATGCGGCTCCACAGAGGGCCATCCCCATCAAGTGA

Coding sequence (CDS)

ATGTTCTTCCTTTTGGGGTGGCAGAACAAGTTTCAAACAATGCCCTCAAAACCAGGAATTGTAGAACAAGAAGTTGCTGATGGGGCGAAGTATTTGCTGCAATCAACCAAATACTCTGAGCCTTGGTGGCATGGCGTTGGAAACAATACCATCACTGATGAAGATGCTACCAAAACATCTTCTGCTGAATACCTGAACGTTACTGTTACCAGTGCAGCTATGCTTTCACAAGCAAATGATGAAAATACTGGGAAAGAAGTTCAGCATCTCAAGTACATTCCATTTTCGACATCCCCACCCGTGGGCGAACGCCTAGATCCAAATTCCCAGATGGAACTTGTTGGCCACTCGATTGTTTTGACATCATATCCTTTTTCAGATGCACAATGTTGTCAAATGCTGACTTCATATGGACCACAAACAACGTTACCTCATTTTTATGGACTTCACCATGCTAGGATGCCATTACCCCTTGAAATGGAAGCAGAGCCTGTTTATGTGAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCATATCTTCATGAATCCAGACATCTCCATGCTATGAGACGAGCAAGAGGCAGCGGAGGACGTTTCCTGAATACCAAAAAGCCGAACAGTGTTATTTCCAATAAAACTATGGAGGAAGACATCAATTCTGGTATCAACCATGTATCAGAACCTGTCAGTGAGGGTGGATCAAATTACATGGTGGCTAATGAAAATGGAATGAAGGATACACTTGATGATCAACAAAAGGAGGACAAAGAGTTCATGCCTCAAAATATGCAGATAACACACGCTTTCTTCAATGGTGGAAAGTCGAATGGCCATGGTTTATCCACATACAATTCAAAACTTGCTGATGAAAGCATGCAGGTGAATGCGGCTCCACAGAGGGCCATCCCCATCAAGTGA

Protein sequence

MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLADESMQVNAAPQRAIPIK
Homology
[Close]
BLAST of Carg13440 vs. NCBI nr
Match: XP_022960498.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata] >XP_022960499.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 646.7 bits (1667), Expect = 4.1e-182
Identity = 321/324 (99.07%), Postives = 322/324 (99.38%), Query Frame = 0 

Query: 1   MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTS 60
           MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTS
Sbjct: 1   MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTS 60

Query: 61  SAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVL 120
           SAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSP VGERLDPNSQMELVGHSIVL
Sbjct: 61  SAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSIVL 120

Query: 121 TSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQ 180
           TSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQ
Sbjct: 121 TSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQ 180

Query: 181 SRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSG 240
           SRAKAELEKKVI+SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSG
Sbjct: 181 SRAKAELEKKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSG 240

Query: 241 INHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS 300
           INHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG GLS
Sbjct: 241 INHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLS 300

Query: 301 TYNSKLADESMQVNAAPQRAIPIK 325
           TYNSKLADESMQVNAAPQRAIPIK
Sbjct: 301 TYNSKLADESMQVNAAPQRAIPIK 324

[Close]
BLAST of Carg13440 vs. NCBI nr
Match: XP_023515220.1 (nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 642.5 bits (1656), Expect = 7.7e-181
Identity = 318/324 (98.15%), Postives = 320/324 (98.77%), Query Frame = 0 

Query: 1   MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTS 60
           MFF LGWQNKFQTMPSKPGIVEQE ADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTS
Sbjct: 1   MFFPLGWQNKFQTMPSKPGIVEQEAADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTS 60

Query: 61  SAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVL 120
           SAEYLNVTVTSAAMLSQANDENTG+EVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVL
Sbjct: 61  SAEYLNVTVTSAAMLSQANDENTGQEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVL 120

Query: 121 TSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQ 180
           TSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQ
Sbjct: 121 TSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQ 180

Query: 181 SRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSG 240
           SRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINS 
Sbjct: 181 SRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSS 240

Query: 241 INHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS 300
           INHVSEPVSEG SNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS
Sbjct: 241 INHVSEPVSEGRSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS 300

Query: 301 TYNSKLADESMQVNAAPQRAIPIK 325
           TYNSKLADES+QVNAAPQRAIPIK
Sbjct: 301 TYNSKLADESIQVNAAPQRAIPIK 324

[Close]
BLAST of Carg13440 vs. NCBI nr
Match: XP_022960500.1 (nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita moschata] >XP_022960501.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 618.2 bits (1593), Expect = 1.6e-173
Identity = 308/311 (99.04%), Postives = 309/311 (99.36%), Query Frame = 0 

Query: 14  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 73
           MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA
Sbjct: 1   MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 60

Query: 74  MLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVLTSYPFSDAQCCQM 133
           MLSQANDENTGKEVQHLKYIPFSTSP VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQM
Sbjct: 61  MLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSIVLTSYPFSDAQCCQM 120

Query: 134 LTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 193
           LTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI+
Sbjct: 121 LTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIR 180

Query: 194 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGS 253
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGS 240

Query: 254 NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLADESMQV 313
           NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG GLSTYNSKLADESMQV
Sbjct: 241 NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQV 300

Query: 314 NAAPQRAIPIK 325
           NAAPQRAIPIK
Sbjct: 301 NAAPQRAIPIK 311

[Close]
BLAST of Carg13440 vs. NCBI nr
Match: XP_023515221.1 (nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 616.7 bits (1589), Expect = 4.5e-173
Identity = 306/311 (98.39%), Postives = 308/311 (99.04%), Query Frame = 0 

Query: 14  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 73
           MPSKPGIVEQE ADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA
Sbjct: 1   MPSKPGIVEQEAADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 60

Query: 74  MLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVLTSYPFSDAQCCQM 133
           MLSQANDENTG+EVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVLTSYPFSDAQCCQM
Sbjct: 61  MLSQANDENTGQEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVLTSYPFSDAQCCQM 120

Query: 134 LTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 193
           LTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 LTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 194 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGS 253
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINS INHVSEPVSEG S
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSSINHVSEPVSEGRS 240

Query: 254 NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLADESMQV 313
           NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLADES+QV
Sbjct: 241 NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLADESIQV 300

Query: 314 NAAPQRAIPIK 325
           NAAPQRAIPIK
Sbjct: 301 NAAPQRAIPIK 311

[Close]
BLAST of Carg13440 vs. NCBI nr
Match: XP_023004607.1 (nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita maxima] >XP_023004608.1 nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 592.4 bits (1526), Expect = 9.1e-166
Identity = 291/296 (98.31%), Postives = 293/296 (98.99%), Query Frame = 0 

Query: 1   MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTS 60
           MFFLLGWQNKFQTMPSKPGIVEQEV DGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTS
Sbjct: 1   MFFLLGWQNKFQTMPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTS 60

Query: 61  SAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVL 120
           SAEYL+VTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL+GHSIVL
Sbjct: 61  SAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELIGHSIVL 120

Query: 121 TSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQ 180
           TSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQ
Sbjct: 121 TSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQ 180

Query: 181 SRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSG 240
           SRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSG
Sbjct: 181 SRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSG 240

Query: 241 INHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG 297
           INHVSEPVSE GSNYMVANENGMKDTLD QQKEDKEFMPQNMQITHAFFNGGKSNG
Sbjct: 241 INHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNG 296

[Close]
BLAST of Carg13440 vs. TAIR10
Match: AT3G20910.1 (nuclear factor Y, subunit A9)

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-31
Identity = 96/231 (41.56%), Postives = 127/231 (54.98%), Query Frame = 0 

Query: 41  PWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENT-GKEVQHLKYIPFSTSP 100
           PW                  S++ + + + S    S +N +NT  KE Q       +TSP
Sbjct: 34  PWHRAAAACNANSSVEAGDKSSKSIALALESNGSKSPSNRDNTVNKESQ------VTTSP 93

Query: 101 -PVGERLDPNSQM------------ELVGHSI-VLTSYPFSDAQCCQMLTSYG--PQTTL 160
              G+  D N +             +LVGH++   +S P+ D     ++ +YG  P   +
Sbjct: 94  QSAGDYSDKNQESLHHGITQPPPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFV 153

Query: 161 PHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESR 220
           P + G+ H+RMPLP EM  EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESR
Sbjct: 154 P-YGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESR 213

Query: 221 HLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSN 255
           H HAMRR RG+GGRF   KK N+  S +  EE  N    HV++  S   S+
Sbjct: 214 HQHAMRRPRGTGGRF--AKKTNTEASKRKAEEKSN---GHVTQSPSSSNSD 252

[Close]
BLAST of Carg13440 vs. TAIR10
Match: AT5G12840.1 (nuclear factor Y, subunit A1)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-30
Identity = 93/227 (40.97%), Postives = 118/227 (51.98%), Query Frame = 0 

Query: 14  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT- 73
           M SKPG   +E  +    + Q   Y+EPWW     GV          + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 74  ---VTSAAMLSQANDENTG--KEVQHL-------KYIPFSTSPPVGERLDPNSQM----E 133
              V SA+     N EN G  K+ Q          +      P +  R   +  +    E
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPE 120

Query: 134 LVGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQ 193
           LVGH I     P+ D     ++ +YG  Q     + G+   R  LPL+M  EPVYVNAKQ
Sbjct: 121 LVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQ 180

Query: 194 YHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF 219
           Y GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF
Sbjct: 181 YEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF 227

[Close]
BLAST of Carg13440 vs. TAIR10
Match: AT2G34720.1 (nuclear factor Y, subunit A4)

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-26
Identity = 73/165 (44.24%), Postives = 92/165 (55.76%), Query Frame = 0 

Query: 70  TSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNS-QMELVGHSIVLTSYPFSDA 129
           +S   LS  N+ +  KE    +  P   S    E +D NS   E + H +    YP+ D 
Sbjct: 3   SSVHELSDNNESHAKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHGL----YPYPDP 62

Query: 130 QCCQMLTSYGPQTTLPHFY--------GLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQ 189
                 + +  Q  LPH Y        G+    +PL  +   EPV+VNAKQYHGILRRRQ
Sbjct: 63  ---YYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQ 122

Query: 190 SRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPN 226
           SRAK E   + IK++KPY+HESRHLHA+RR RG GGRFLN KK N
Sbjct: 123 SRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKEN 160

[Close]
BLAST of Carg13440 vs. TAIR10
Match: AT5G06510.1 (nuclear factor Y, subunit A10)

HSP 1 Score: 115.9 bits (289), Expect = 4.5e-26
Identity = 83/237 (35.02%), Postives = 119/237 (50.21%), Query Frame = 0 

Query: 41  PWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP 100
           PWW+  G+  +T E  +  +S  +  V   +        D+ T   +         T  P
Sbjct: 13  PWWNAFGSQPLTTESLSGEASDSFTGVKAVTTEAEQGVVDKQTSTTL--------FTFSP 72

Query: 101 VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHA-------- 160
            GE+   +     V  ++    + F  AQ       Y     +  +YG+  A        
Sbjct: 73  GGEKSSRDVPKPHVAFAMQSACFEFGFAQPMM----YTKHPHVEQYYGVVSAYGSQRSSG 132

Query: 161 RMPLPLEMEAE---PVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMR 220
           R+ +PL+ME E    +YVN+KQYHGI+RRRQSRAKAE   K+ + RKPY+H SRHLHAMR
Sbjct: 133 RVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKAE---KLSRCRKPYMHHSRHLHAMR 192

Query: 221 RARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDT 267
           R RGSGGRFLNTK  ++   +K      NS  + V  P +E  ++   ANE+ + D+
Sbjct: 193 RPRGSGGRFLNTKTADAAKQSKPS----NSQSSEVFHPENETINSSREANESNLSDS 230

[Close]
BLAST of Carg13440 vs. TAIR10
Match: AT1G54160.1 (nuclear factor Y, subunit A5)

HSP 1 Score: 112.5 bits (280), Expect = 5.0e-25
Identity = 65/114 (57.02%), Postives = 77/114 (67.54%), Query Frame = 0 

Query: 141 TTLPH--FYGLHHARMPLPLEM-EAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKP 200
           T LPH    GL  +R+PLP  + E EP++VNAKQYH ILRRR+ RAK E + K+IK RKP
Sbjct: 153 TALPHLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKP 212

Query: 201 YLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEG 252
           YLHESRHLHA++RARGSGGRFLNTKK     SN      + +G N    P   G
Sbjct: 213 YLHESRHLHALKRARGSGGRFLNTKKLQE-SSNSLCSSQMANGQNFSMSPHGGG 265

[Close]
BLAST of Carg13440 vs. Swiss-Prot
Match: sp|Q945M9|NFYA9_ARATH (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.2e-30
Identity = 96/231 (41.56%), Postives = 127/231 (54.98%), Query Frame = 0 

Query: 41  PWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENT-GKEVQHLKYIPFSTSP 100
           PW                  S++ + + + S    S +N +NT  KE Q       +TSP
Sbjct: 34  PWHRAAAACNANSSVEAGDKSSKSIALALESNGSKSPSNRDNTVNKESQ------VTTSP 93

Query: 101 -PVGERLDPNSQM------------ELVGHSI-VLTSYPFSDAQCCQMLTSYG--PQTTL 160
              G+  D N +             +LVGH++   +S P+ D     ++ +YG  P   +
Sbjct: 94  QSAGDYSDKNQESLHHGITQPPPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFV 153

Query: 161 PHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESR 220
           P + G+ H+RMPLP EM  EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESR
Sbjct: 154 P-YGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESR 213

Query: 221 HLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSN 255
           H HAMRR RG+GGRF   KK N+  S +  EE  N    HV++  S   S+
Sbjct: 214 HQHAMRRPRGTGGRF--AKKTNTEASKRKAEEKSN---GHVTQSPSSSNSD 252

[Close]
BLAST of Carg13440 vs. Swiss-Prot
Match: sp|Q9LXV5|NFYA1_ARATH (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.5e-29
Identity = 93/227 (40.97%), Postives = 118/227 (51.98%), Query Frame = 0 

Query: 14  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT- 73
           M SKPG   +E  +    + Q   Y+EPWW     GV          + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 74  ---VTSAAMLSQANDENTG--KEVQHL-------KYIPFSTSPPVGERLDPNSQM----E 133
              V SA+     N EN G  K+ Q          +      P +  R   +  +    E
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPE 120

Query: 134 LVGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQ 193
           LVGH I     P+ D     ++ +YG  Q     + G+   R  LPL+M  EPVYVNAKQ
Sbjct: 121 LVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQ 180

Query: 194 YHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRF 219
           Y GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF
Sbjct: 181 YEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF 227

[Close]
BLAST of Carg13440 vs. Swiss-Prot
Match: sp|Q8VY64|NFYA4_ARATH (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-25
Identity = 73/165 (44.24%), Postives = 92/165 (55.76%), Query Frame = 0 

Query: 70  TSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNS-QMELVGHSIVLTSYPFSDA 129
           +S   LS  N+ +  KE    +  P   S    E +D NS   E + H +    YP+ D 
Sbjct: 3   SSVHELSDNNESHAKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHGL----YPYPDP 62

Query: 130 QCCQMLTSYGPQTTLPHFY--------GLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQ 189
                 + +  Q  LPH Y        G+    +PL  +   EPV+VNAKQYHGILRRRQ
Sbjct: 63  ---YYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQ 122

Query: 190 SRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPN 226
           SRAK E   + IK++KPY+HESRHLHA+RR RG GGRFLN KK N
Sbjct: 123 SRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKEN 160

[Close]
BLAST of Carg13440 vs. Swiss-Prot
Match: sp|Q8LFU0|NFYAA_ARATH (Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=NFYA10 PE=2 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 8.2e-25
Identity = 83/237 (35.02%), Postives = 119/237 (50.21%), Query Frame = 0 

Query: 41  PWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP 100
           PWW+  G+  +T E  +  +S  +  V   +        D+ T   +         T  P
Sbjct: 13  PWWNAFGSQPLTTESLSGEASDSFTGVKAVTTEAEQGVVDKQTSTTL--------FTFSP 72

Query: 101 VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHA-------- 160
            GE+   +     V  ++    + F  AQ       Y     +  +YG+  A        
Sbjct: 73  GGEKSSRDVPKPHVAFAMQSACFEFGFAQPMM----YTKHPHVEQYYGVVSAYGSQRSSG 132

Query: 161 RMPLPLEMEAE---PVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMR 220
           R+ +PL+ME E    +YVN+KQYHGI+RRRQSRAKAE   K+ + RKPY+H SRHLHAMR
Sbjct: 133 RVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKAE---KLSRCRKPYMHHSRHLHAMR 192

Query: 221 RARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDT 267
           R RGSGGRFLNTK  ++   +K      NS  + V  P +E  ++   ANE+ + D+
Sbjct: 193 RPRGSGGRFLNTKTADAAKQSKPS----NSQSSEVFHPENETINSSREANESNLSDS 230

[Close]
BLAST of Carg13440 vs. Swiss-Prot
Match: sp|Q9SYH4|NFYA5_ARATH (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NFYA5 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.1e-24
Identity = 65/114 (57.02%), Postives = 77/114 (67.54%), Query Frame = 0 

Query: 141 TTLPH--FYGLHHARMPLPLEM-EAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKP 200
           T LPH    GL  +R+PLP  + E EP++VNAKQYH ILRRR+ RAK E + K+IK RKP
Sbjct: 153 TALPHLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKP 212

Query: 201 YLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEG 252
           YLHESRHLHA++RARGSGGRFLNTKK     SN      + +G N    P   G
Sbjct: 213 YLHESRHLHALKRARGSGGRFLNTKKLQE-SSNSLCSSQMANGQNFSMSPHGGG 265

[Close]
BLAST of Carg13440 vs. TrEMBL
Match: tr|A0A1S3CED9|A0A1S3CED9_CUCME (nuclear transcription factor Y subunit A-9-like OS=Cucumis melo OX=3656 GN=LOC103499928 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 7.0e-138
Identity = 259/321 (80.69%), Postives = 273/321 (85.05%), Query Frame = 0 

Query: 14  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 73
           MPS+P  V+Q+VAD AKYLLQS+KYSEPWWHGVGNNTI  EDA KTSSAEYLNVTV S A
Sbjct: 2   MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 74  MLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVLTSYPFSDAQCCQM 133
              QANDEN GKEVQHLKYIPFSTSPPVGE LD NSQMELVGHSIVLTSYPFSDAQ CQM
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 134 LTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 193
           LTSYGPQ TLP  YGLHHARMPLPLEME EPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 194 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGS 253
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPN+V+SN   EEDINSG NH ++PVSE GS
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS 241

Query: 254 NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLAD----- 313
            YMV +E G+K+TLD+Q    +E M QNMQITHAFFN GKSN HGLSTYNS+L D     
Sbjct: 242 KYMVTHEKGIKNTLDEQ---SRELMTQNMQITHAFFN-GKSNVHGLSTYNSQLGDVEGGH 301

Query: 314 -----ESMQVNAAPQRAIPIK 325
                ESMQVN APQRAIPIK
Sbjct: 302 LDHPHESMQVNGAPQRAIPIK 318

[Close]
BLAST of Carg13440 vs. TrEMBL
Match: tr|A0A0A0K612|A0A0A0K612_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428130 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 3.5e-137
Identity = 258/321 (80.37%), Postives = 273/321 (85.05%), Query Frame = 0 

Query: 14  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 73
           MPS+P  V+Q+VADGAKYLLQSTK+SEPWWHGVGNNTI  EDA KTSSAEYLNVTV S A
Sbjct: 2   MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 74  MLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVLTSYPFSDAQCCQM 133
              QANDEN GKEVQHLKYIPFSTSPPVGE LD NSQMELVGHSIVLTSYPFSDAQ CQM
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 134 LTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 193
           LTSYGPQ TLP  YGLHHARMPLPLEME EPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 194 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGS 253
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPN+V+SN   EEDI+S  NH ++PVSE  S
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVS 241

Query: 254 NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLAD----- 313
            YMV NE G+K+TLD+Q    +EFM QNMQITHAFFN GKSN HGLSTY+S+L D     
Sbjct: 242 KYMVTNEKGIKNTLDEQ---SREFMTQNMQITHAFFN-GKSNVHGLSTYSSQLGDVEGGH 301

Query: 314 -----ESMQVNAAPQRAIPIK 325
                ESMQVN APQRAIPIK
Sbjct: 302 LDQPHESMQVNGAPQRAIPIK 318

[Close]
BLAST of Carg13440 vs. TrEMBL
Match: tr|A0A2I4EBM2|A0A2I4EBM2_9ROSI (nuclear transcription factor Y subunit A-1-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108988110 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.0e-77
Identity = 173/336 (51.49%), Postives = 209/336 (62.20%), Query Frame = 0 

Query: 14  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 73
           MP+KPG  +  +  G + +LQS  YS+PWW GVG+N    ++A+K++S E+LNV+V + A
Sbjct: 2   MPAKPGNEDGRLEHGGQTVLQSATYSQPWWRGVGSNVSLGDNASKSTSMEHLNVSVGNGA 61

Query: 74  MLSQAN--------------DENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIV 133
           M  + N              D N GKE +    +P S +P + E LDPNSQMELVGHSIV
Sbjct: 62  MQLKVNGPLDDGAKFNKETRDGNIGKEHRDNNRVP-SLTPKMVEHLDPNSQMELVGHSIV 121

Query: 134 LTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRR 193
           LTSYP+SD Q   M  SYGPQ  +P  YG+HHARMPLPLEME EPVYVNAKQYHGILRRR
Sbjct: 122 LTSYPYSDQQYGGMFASYGPQAMIPELYGMHHARMPLPLEMEEEPVYVNAKQYHGILRRR 181

Query: 194 QSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINS 253
           QSRAKAELEKK+IK RKPYLHESRHLHAMRRARG GGRFLNTKK ++ +S+   EE +N 
Sbjct: 182 QSRAKAELEKKMIKVRKPYLHESRHLHAMRRARGCGGRFLNTKKLDN-LSDPPSEEGMNM 241

Query: 254 GINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGL 313
           G      P    GS     N NG   +  +Q K     +  N    H F  G  S+    
Sbjct: 242 GAKPSMGPTISSGSKCFFNNGNGNSGSSLNQHKGSLPIV-HNTHGAHCFSKGNSSSNGLS 301

Query: 314 STYNSKLAD-----------ESMQVNAAPQRAIPIK 325
           STY+S  +D           ESMQVN     A+PIK
Sbjct: 302 STYHSLFSDGKEVDCLGQQRESMQVNGVAHGALPIK 334

[Close]
BLAST of Carg13440 vs. TrEMBL
Match: tr|D7T311|D7T311_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0064g00860 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.0e-77
Identity = 178/359 (49.58%), Postives = 218/359 (60.72%), Query Frame = 0 

Query: 3   FLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDE----DATK 62
           FL  W  +   MP+KP I ++ +  G K    ST YS+PWWHGVGNN I+        +K
Sbjct: 51  FLFSWWKRI--MPTKPKIEDRRIEPGGKSNPSSTVYSQPWWHGVGNNAISPAALGGSPSK 110

Query: 63  TSSAEYLNVTVTSAAMLSQAN---------------------DENTGKEVQHLKYIPFST 122
           ++S E+LN  +TS     QAN                     D   G+E QHL     ST
Sbjct: 111 STSVEHLNSHITSNGFQLQANGRLDDGTTFNKGTQPTVALQSDGRNGQEHQHLNPTASST 170

Query: 123 SPPVGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTL-PHFYGLHHARMPL 182
            P + E L+PNSQMELVGHSIVLTSYP+ D     ++TSYGPQ  + PH +G+H  RMPL
Sbjct: 171 LPIMSEHLEPNSQMELVGHSIVLTSYPYQDPHNVGIMTSYGPQAMVHPHLFGMHQPRMPL 230

Query: 183 PLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGG 242
           PLEME EPVYVNAKQYHGILRRRQSRAKAELEKK IK RKPYLHESRH HAMRRARG GG
Sbjct: 231 PLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKAIKVRKPYLHESRHQHAMRRARGCGG 290

Query: 243 RFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKE 302
           RFLNTKK ++  +N T E+   SG    ++  S  GS ++  N +   D+   QQ E+K 
Sbjct: 291 RFLNTKKLDNNDANTTAEKGSVSGAALSTQSASSSGSEHLPTNSSRNLDSSSVQQ-EEKG 350

Query: 303 FMPQNMQITHAFFNGGKSNGHGLST-YNSKLAD----------ESMQVNAAPQRAIPIK 325
              Q+M   H + NG + NGHGLS+ Y+S              E+MQ+N AP RA+PIK
Sbjct: 351 RTIQDMLEAHTYSNGNR-NGHGLSSAYHSSNGSEGGDCFGQPRENMQLNTAPHRALPIK 405

[Close]
BLAST of Carg13440 vs. TrEMBL
Match: tr|A0A2I4EBK9|A0A2I4EBK9_9ROSI (nuclear transcription factor Y subunit A-1-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108988110 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.6e-76
Identity = 173/343 (50.44%), Postives = 209/343 (60.93%), Query Frame = 0 

Query: 14  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 73
           MP+KPG  +  +  G + +LQS  YS+PWW GVG+N    ++A+K++S E+LNV+V + A
Sbjct: 2   MPAKPGNEDGRLEHGGQTVLQSATYSQPWWRGVGSNVSLGDNASKSTSMEHLNVSVGNGA 61

Query: 74  MLSQAN---------------------DENTGKEVQHLKYIPFSTSPPVGERLDPNSQME 133
           M  + N                     D N GKE +    +P S +P + E LDPNSQME
Sbjct: 62  MQLKVNGPLDDGAKFNKETRGTVASKSDGNIGKEHRDNNRVP-SLTPKMVEHLDPNSQME 121

Query: 134 LVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQY 193
           LVGHSIVLTSYP+SD Q   M  SYGPQ  +P  YG+HHARMPLPLEME EPVYVNAKQY
Sbjct: 122 LVGHSIVLTSYPYSDQQYGGMFASYGPQAMIPELYGMHHARMPLPLEMEEEPVYVNAKQY 181

Query: 194 HGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKT 253
           HGILRRRQSRAKAELEKK+IK RKPYLHESRHLHAMRRARG GGRFLNTKK ++ +S+  
Sbjct: 182 HGILRRRQSRAKAELEKKMIKVRKPYLHESRHLHAMRRARGCGGRFLNTKKLDN-LSDPP 241

Query: 254 MEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGG 313
            EE +N G      P    GS     N NG   +  +Q K     +  N    H F  G 
Sbjct: 242 SEEGMNMGAKPSMGPTISSGSKCFFNNGNGNSGSSLNQHKGSLPIV-HNTHGAHCFSKGN 301

Query: 314 KSNGHGLSTYNSKLAD-----------ESMQVNAAPQRAIPIK 325
            S+    STY+S  +D           ESMQVN     A+PIK
Sbjct: 302 SSSNGLSSTYHSLFSDGKEVDCLGQQRESMQVNGVAHGALPIK 341

The following BLAST results are available for this feature:
BLAST of Carg13440 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960498.14.1e-18299.07nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata] ... [more]
XP_023515220.17.7e-18198.15nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita pepo subsp... [more]
XP_022960500.11.6e-17399.04nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita moschata] ... [more]
XP_023515221.14.5e-17398.39nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp... [more]
XP_023004607.19.1e-16698.31nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita maxima] >X... [more]
BLAST of Carg13440 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G20910.11.2e-3141.56nuclear factor Y, subunit A9[more]
AT5G12840.11.4e-3040.97nuclear factor Y, subunit A1[more]
AT2G34720.11.6e-2644.24nuclear factor Y, subunit A4[more]
AT5G06510.14.5e-2635.02nuclear factor Y, subunit A10[more]
AT1G54160.15.0e-2557.02nuclear factor Y, subunit A5[more]
BLAST of Carg13440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q945M9|NFYA9_ARATH2.2e-3041.56Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
sp|Q9LXV5|NFYA1_ARATH2.5e-2940.97Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
sp|Q8VY64|NFYA4_ARATH2.8e-2544.24Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
sp|Q8LFU0|NFYAA_ARATH8.2e-2535.02Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=N... [more]
sp|Q9SYH4|NFYA5_ARATH9.1e-2457.02Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
BLAST of Carg13440 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CED9|A0A1S3CED9_CUCME7.0e-13880.69nuclear transcription factor Y subunit A-9-like OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0K612|A0A0A0K612_CUCSA3.5e-13780.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428130 PE=4 SV=1[more]
tr|A0A2I4EBM2|A0A2I4EBM2_9ROSI4.0e-7751.49nuclear transcription factor Y subunit A-1-like isoform X2 OS=Juglans regia OX=5... [more]
tr|D7T311|D7T311_VITVI4.0e-7749.58Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0064g00860 PE=4 SV=... [more]
tr|A0A2I4EBK9|A0A2I4EBK9_9ROSI2.6e-7650.44nuclear transcription factor Y subunit A-1-like isoform X1 OS=Juglans regia OX=5... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0016602CCAAT-binding factor complex
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR018362CCAAT-binding_factor_CS
IPR001289NFYA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016602 CCAAT-binding factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg13440-RACarg13440-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001289Nuclear transcription factor Y subunit APRINTSPR00616CCAATSUBUNTBcoord: 164..186
score: 77.29
coord: 195..218
score: 81.71
IPR001289Nuclear transcription factor Y subunit ASMARTSM00521cbf3coord: 160..221
e-value: 5.4E-37
score: 138.9
IPR001289Nuclear transcription factor Y subunit APFAMPF02045CBFB_NFYAcoord: 163..218
e-value: 1.3E-26
score: 92.9
IPR001289Nuclear transcription factor Y subunit APANTHERPTHR12632TRANSCRIPTION FACTOR NF-Y ALPHA-RELATEDcoord: 67..310
IPR001289Nuclear transcription factor Y subunit APROSITEPS51152NFYA_HAP2_2coord: 161..221
score: 38.398
NoneNo IPR availablePANTHERPTHR12632:SF14NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATEDcoord: 67..310
IPR018362CCAAT-binding factor, conserved sitePROSITEPS00686NFYA_HAP2_1coord: 166..186

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg13440Cla015244Watermelon (97103) v1carwmB0451
Carg13440Csa7G428130Cucumber (Chinese Long) v2carcuB0484
Carg13440MELO3C023554Melon (DHL92) v3.5.1carmeB0455
Carg13440ClCG09G004120Watermelon (Charleston Gray)carwcgB0440
Carg13440CSPI07G19220Wild cucumber (PI 183967)carcpiB0489
Carg13440Cucsa.127910Cucumber (Gy14) v1carcgyB0521
Carg13440CmaCh08G005260Cucurbita maxima (Rimu)carcmaB0628
Carg13440CmaCh17G009550Cucurbita maxima (Rimu)carcmaB0625
Carg13440CmoCh17G009310Cucurbita moschata (Rifu)carcmoB0608
Carg13440CmoCh08G005170Cucurbita moschata (Rifu)carcmoB0610
Carg13440Lsi02G025720Bottle gourd (USVL1VR-Ls)carlsiB409
Carg13440Cp4.1LG05g04960Cucurbita pepo (Zucchini)carcpeB0635
Carg13440Cp4.1LG17g08050Cucurbita pepo (Zucchini)carcpeB0632
Carg13440Cp4.1LG12g06840Cucurbita pepo (Zucchini)carcpeB0631
Carg13440CsGy7G017580Cucumber (Gy14) v2carcgybB0461
Carg13440MELO3C023554.2Melon (DHL92) v3.6.1carmedB0458
Carg13440CsaV3_7G031020Cucumber (Chinese Long) v3carcucB0486
Carg13440Cla97C02G049270Watermelon (97103) v2carwmbB0472
Carg13440Cla97C09G166390Watermelon (97103) v2carwmbB0473
Carg13440Bhi10G000228Wax gourdcarwgoB0544
Carg13440Bhi09G000535Wax gourdcarwgoB0546
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg13440Carg18672Silver-seed gourdcarcarB379
Carg13440Carg06900Silver-seed gourdcarcarB452
Carg13440Carg02706Silver-seed gourdcarcarB455
The following block(s) are covering this gene:
GeneOrganismBlock
Carg13440Silver-seed gourdcarcarB453
Carg13440Silver-seed gourdcarcarB454
Carg13440Cucumber (Gy14) v2carcgybB0460
Carg13440Cucurbita maxima (Rimu)carcmaB0624
Carg13440Cucurbita maxima (Rimu)carcmaB0626
Carg13440Cucurbita moschata (Rifu)carcmoB0607
Carg13440Cucurbita moschata (Rifu)carcmoB0609
Carg13440Cucurbita pepo (Zucchini)carcpeB0633
Carg13440Cucurbita pepo (Zucchini)carcpeB0634
Carg13440Wild cucumber (PI 183967)carcpiB0488
Carg13440Cucumber (Chinese Long) v2carcuB0483
Carg13440Cucumber (Chinese Long) v3carcucB0485
Carg13440Bottle gourd (USVL1VR-Ls)carlsiB410
Carg13440Melon (DHL92) v3.5.1carmeB0457
Carg13440Melon (DHL92) v3.6.1carmedB0460
Carg13440Watermelon (Charleston Gray)carwcgB0442
Carg13440Watermelon (Charleston Gray)carwcgB0443
Carg13440Watermelon (97103) v1carwmB0448
Carg13440Watermelon (97103) v1carwmB0450
Carg13440Watermelon (97103) v1carwmB0452
Carg13440Watermelon (97103) v2carwmbB0471
Carg13440Watermelon (97103) v2carwmbB0474
Carg13440Watermelon (97103) v2carwmbB0475
Carg13440Wax gourdcarwgoB0542