Carg17331 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGGACTCAGTGCAATCTTAGAAACTCGGAAACTCGGCATTACTGACTCAACTCGTCAGGTCATTAACAAATCCACTCTTATTATGATTAATAGCAACGCCAACGACCACCACCGCCACCACCGTTCTTCTTCTTCTTCTAAAAGATATCTCGACCGCTGCTTTCTCTGCGGTCAGAAGCTCCTCCCCGGAAAAGACATCTACATGTACGAGTAAGTACTCATTAGAAAAAGATTTTATATTTTAAAAAATATTTTTATTATAATTTTTGACGACGTGGGTTTTTTCACAGAGGAGACAAGGGTTTCTGCAGCGAGGAGTGTCGATGCCGGCAGATTTTCATGGACGAAGAACAGAGCATGGTGGAAGCAGGGAACTGCTCGTTGGCGGCTGCCATTAACCCACAAACCACCACATCGCCGTCGTGTCCCTCGCCTCAGCCATCTCGCCACCCTCGAGCTACCAGAGACCACACCCAAGCTTTTGCCTACTGA ATGGTCGGACTCAGTGCAATCTTAGAAACTCGGAAACTCGGCATTACTGACTCAACTCGTCAGGTCATTAACAAATCCACTCTTATTATGATTAATAGCAACGCCAACGACCACCACCGCCACCACCGTTCTTCTTCTTCTTCTAAAAGATATCTCGACCGCTGCTTTCTCTGCGGTCAGAAGCTCCTCCCCGGAAAAGACATCTACATGTACGAAGGAGACAAGGGTTTCTGCAGCGAGGAGTGTCGATGCCGGCAGATTTTCATGGACGAAGAACAGAGCATGGTGGAAGCAGGGAACTGCTCGTTGGCGGCTGCCATTAACCCACAAACCACCACATCGCCGTCGTGTCCCTCGCCTCAGCCATCTCGCCACCCTCGAGCTACCAGAGACCACACCCAAGCTTTTGCCTACTGA ATGGTCGGACTCAGTGCAATCTTAGAAACTCGGAAACTCGGCATTACTGACTCAACTCGTCAGGTCATTAACAAATCCACTCTTATTATGATTAATAGCAACGCCAACGACCACCACCGCCACCACCGTTCTTCTTCTTCTTCTAAAAGATATCTCGACCGCTGCTTTCTCTGCGGTCAGAAGCTCCTCCCCGGAAAAGACATCTACATGTACGAAGGAGACAAGGGTTTCTGCAGCGAGGAGTGTCGATGCCGGCAGATTTTCATGGACGAAGAACAGAGCATGGTGGAAGCAGGGAACTGCTCGTTGGCGGCTGCCATTAACCCACAAACCACCACATCGCCGTCGTGTCCCTCGCCTCAGCCATCTCGCCACCCTCGAGCTACCAGAGACCACACCCAAGCTTTTGCCTACTGA MVGLSAILETRKLGITDSTRQVINKSTLIMINSNANDHHRHHRSSSSSKRYLDRCFLCGQKLLPGKDIYMYEGDKGFCSEECRCRQIFMDEEQSMVEAGNCSLAAAINPQTTTSPSCPSPQPSRHPRATRDHTQAFAY
BLAST of Carg17331 vs. NCBI nr
Match: XP_022943356.1 (uncharacterized protein LOC111448140 isoform X1 [Cucurbita moschata]) HSP 1 Score: 228.4 bits (581), Expect = 1.5e-56 Identity = 132/139 (94.96%), Postives = 132/139 (94.96%), Query Frame = 0
BLAST of Carg17331 vs. NCBI nr
Match: XP_023540364.1 (uncharacterized protein LOC111800761 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 228.0 bits (580), Expect = 1.9e-56 Identity = 132/141 (93.62%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Carg17331 vs. NCBI nr
Match: XP_022973720.1 (uncharacterized protein LOC111472297 isoform X1 [Cucurbita maxima]) HSP 1 Score: 224.6 bits (571), Expect = 2.1e-55 Identity = 128/147 (87.07%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of Carg17331 vs. NCBI nr
Match: XP_022943365.1 (uncharacterized protein LOC111448140 isoform X2 [Cucurbita moschata]) HSP 1 Score: 217.6 bits (553), Expect = 2.6e-53 Identity = 129/139 (92.81%), Postives = 130/139 (93.53%), Query Frame = 0
BLAST of Carg17331 vs. NCBI nr
Match: XP_023540365.1 (uncharacterized protein LOC111800761 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 217.2 bits (552), Expect = 3.4e-53 Identity = 129/141 (91.49%), Postives = 131/141 (92.91%), Query Frame = 0
BLAST of Carg17331 vs. TAIR10
Match: AT5G49120.1 (Protein of unknown function (DUF581)) HSP 1 Score: 78.6 bits (192), Expect = 3.4e-15 Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of Carg17331 vs. TAIR10
Match: AT5G47060.1 (Protein of unknown function (DUF581)) HSP 1 Score: 58.9 bits (141), Expect = 2.8e-09 Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 0
BLAST of Carg17331 vs. TAIR10
Match: AT4G17670.1 (Protein of unknown function (DUF581)) HSP 1 Score: 58.5 bits (140), Expect = 3.7e-09 Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 0
BLAST of Carg17331 vs. TAIR10
Match: AT1G78020.1 (Protein of unknown function (DUF581)) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08 Identity = 32/74 (43.24%), Postives = 40/74 (54.05%), Query Frame = 0
BLAST of Carg17331 vs. TAIR10
Match: AT1G74940.1 (Protein of unknown function (DUF581)) HSP 1 Score: 55.8 bits (133), Expect = 2.4e-08 Identity = 30/65 (46.15%), Postives = 36/65 (55.38%), Query Frame = 0
BLAST of Carg17331 vs. Swiss-Prot
Match: sp|Q8LGS1|MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 1.6e-06 Identity = 20/44 (45.45%), Postives = 32/44 (72.73%), Query Frame = 0
BLAST of Carg17331 vs. TrEMBL
Match: tr|A0A1S3AY62|A0A1S3AY62_CUCME (uncharacterized protein LOC103483860 OS=Cucumis melo OX=3656 GN=LOC103483860 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.3e-37 Identity = 101/145 (69.66%), Postives = 115/145 (79.31%), Query Frame = 0
BLAST of Carg17331 vs. TrEMBL
Match: tr|A0A0A0L925|A0A0A0L925_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164460 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.0e-37 Identity = 101/144 (70.14%), Postives = 118/144 (81.94%), Query Frame = 0
BLAST of Carg17331 vs. TrEMBL
Match: tr|V4U0J6|V4U0J6_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10006176mg PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.6e-22 Identity = 69/144 (47.92%), Postives = 88/144 (61.11%), Query Frame = 0
BLAST of Carg17331 vs. TrEMBL
Match: tr|A0A067G8A2|A0A067G8A2_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032471mg PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.6e-22 Identity = 69/144 (47.92%), Postives = 88/144 (61.11%), Query Frame = 0
BLAST of Carg17331 vs. TrEMBL
Match: tr|I1MRK2|I1MRK2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100818870 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.7e-22 Identity = 54/105 (51.43%), Postives = 73/105 (69.52%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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