Cla021754 (gene) Watermelon (97103) v1

Overview
NameCla021754
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr5 : 5916264 .. 5916422 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGAAGAAGAAACCATGGTGGACGCCGGAAACTGCTCCTTCGCCGCCGTCATTAACCCACAAACCACCGCTCCTTCTCCTTCTCCTTCTCCTTCCCCTCCCCCTTCTGGCCTCCCTAAACCCACCAAAAACCACGCCCCAGGTTTTGCCTACTGA

mRNA sequence

ATGGACGAAGAAGAAACCATGGTGGACGCCGGAAACTGCTCCTTCGCCGCCGTCATTAACCCACAAACCACCGCTCCTTCTCCTTCTCCTTCTCCTTCCCCTCCCCCTTCTGGCCTCCCTAAACCCACCAAAAACCACGCCCCAGGTTTTGCCTACTGA

Coding sequence (CDS)

ATGGACGAAGAAGAAACCATGGTGGACGCCGGAAACTGCTCCTTCGCCGCCGTCATTAACCCACAAACCACCGCTCCTTCTCCTTCTCCTTCTCCTTCCCCTCCCCCTTCTGGCCTCCCTAAACCCACCAAAAACCACGCCCCAGGTTTTGCCTACTGA

Protein sequence

MDEEETMVDAGNCSFAAVINPQTTAPSPSPSPSPPPSGLPKPTKNHAPGFAY
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU60560watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021754Cla021754.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU60560WMU60560transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla021754Cla97C05G087760Watermelon (97103) v2wmwmbB206
Cla021754ClCG05G006210Watermelon (Charleston Gray)wcgwmB286
Cla021754CSPI03G14580Wild cucumber (PI 183967)cpiwmB231
Cla021754Cucsa.252940Cucumber (Gy14) v1cgywmB479
Cla021754Lsi05G015520Bottle gourd (USVL1VR-Ls)lsiwmB362
Cla021754CsGy3G014730Cucumber (Gy14) v2cgybwmB217
Cla021754Carg17331Silver-seed gourdcarwmB0603
Cla021754CsaV3_3G014820Cucumber (Chinese Long) v3cucwmB239
Cla021754Bhi01G000733Wax gourdwgowmB201
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla021754Wax gourdwgowmB069
Cla021754Watermelon (97103) v1wmwmB022
Cla021754Watermelon (97103) v1wmwmB138
Cla021754Cucumber (Gy14) v1cgywmB068
Cla021754Cucumber (Gy14) v1cgywmB405
Cla021754Cucurbita maxima (Rimu)cmawmB002
Cla021754Cucurbita maxima (Rimu)cmawmB345
Cla021754Cucurbita maxima (Rimu)cmawmB242
Cla021754Cucurbita maxima (Rimu)cmawmB344
Cla021754Cucurbita maxima (Rimu)cmawmB798
Cla021754Cucurbita maxima (Rimu)cmawmB869
Cla021754Cucurbita moschata (Rifu)cmowmB231
Cla021754Cucurbita moschata (Rifu)cmowmB341
Cla021754Cucurbita moschata (Rifu)cmowmB793
Cla021754Cucurbita moschata (Rifu)cmowmB856
Cla021754Melon (DHL92) v3.5.1mewmB096
Cla021754Melon (DHL92) v3.5.1mewmB461
Cla021754Watermelon (Charleston Gray)wcgwmB332
Cla021754Cucumber (Chinese Long) v2cuwmB233
Cla021754Cucumber (Chinese Long) v2cuwmB497
Cla021754Cucumber (Chinese Long) v2cuwmB588
Cla021754Cucurbita pepo (Zucchini)cpewmB152
Cla021754Cucurbita pepo (Zucchini)cpewmB153
Cla021754Cucurbita pepo (Zucchini)cpewmB329
Cla021754Cucurbita pepo (Zucchini)cpewmB613
Cla021754Cucurbita pepo (Zucchini)cpewmB845
Cla021754Bottle gourd (USVL1VR-Ls)lsiwmB017
Cla021754Cucumber (Gy14) v2cgybwmB041
Cla021754Cucumber (Gy14) v2cgybwmB464
Cla021754Melon (DHL92) v3.6.1medwmB094
Cla021754Melon (DHL92) v3.6.1medwmB271
Cla021754Melon (DHL92) v3.6.1medwmB447
Cla021754Silver-seed gourdcarwmB0070
Cla021754Silver-seed gourdcarwmB0269
Cla021754Silver-seed gourdcarwmB0700
Cla021754Cucumber (Chinese Long) v3cucwmB046
Cla021754Cucumber (Chinese Long) v3cucwmB522
Cla021754Watermelon (97103) v2wmwmbB217