CmoCh08G012090 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G012090
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DUF581 family protein
Location	Cmo_Chr08 : 7677738 .. 7678594 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAAAGAAACCAAGGAACCAGGAAACAAAATCGTCCCTGTTTTTTTTTCTTTCCCATTTTCTCCCTGAACTTAAATGCTCTTACAATGGTCGGTTTAAGCGTGATTCTGGAATCCAACCAGGGAGATTTTTGTAATAAATCATCCCAGGTTATCAGTAAAGCCTCCGTTATGAACCTCACCGTCAACTCCTCTTCTCGCAACCCTAATTCCTGCCTCCAGACGACGTCGCTTCGCCTCCATTCCTGCTATCTCTGTAATCAGAAGCTCTTGCCTGGGAAGGACATCTATATGTACAAGTAACTCTCTCTCTCTCTCTCTCTCTCGCTCTCTCTCTCTATATATATATATATATATTTATATTTGTATTTGTCTGATGATATTGTTGGGATTTAGGGGAGATAGGGGATTTTGCAGCGTGGAGTGTAGGTGCAGGCAGATTTTAATGGACGAAAAAGAGAGTATAATGAAGGAAAATTCATCGTCGAGTCGTTAAACGGCGTCGCTTTCGAGTTCGGAATCTGGTTCTTCTTCTTCGTCGACTTCAATGGCGGCTTCTCGTGACCGTAAATCCACGAGGAATCGGAGAGGAGAATTTGCGTATTGAGAGGGGAACAAGAACAAGAGAGAAATGAGTAGCGAAATTACGGAGTTACCCTTTTGTAATATAGTAAATGACGTTTTTGTCCTTGTGAGTTTTTTTTTTTTTTTTCTTTCTTCTTTTTGGTGTGCTCCCTAAAAGAGAAGCCATTAATCCATGAATGAAATGGTGAGCTCCCGCATTTTGGCTACTTCCTTGTCGGACAGTTTTTGGCGTTTTCTTTACCTCTCACGAGCCGTAAAAATGGTCAAATTATG

mRNA sequence

CTGAAAGAAACCAAGGAACCAGGAAACAAAATCGTCCCTGTTTTTTTTTCTTTCCCATTTTCTCCCTGAACTTAAATGCTCTTACAATGGTCGGTTTAAGCGTGATTCTGGAATCCAACCAGGGAGATTTTTGTAATAAATCATCCCAGGTTATCAGTAAAGCCTCCGTTATGAACCTCACCGTCAACTCCTCTTCTCGCAACCCTAATTCCTGCCTCCAGACGACGTCGCTTCGCCTCCATTCCTGCTATCTCTGTAATCAGAAGCTCTTGCCTGGGAAGGACATCTATATGTACAAGGGAGATAGGGGATTTTGCAGCGTGGAGTGTAGGTGCAGGCAGATTTTAATGGACGAAAAAGAGAGTATAATGAAGGAAAATTCATCGTCGAGTCGTTAAACGGCGTCGCTTTCGAGTTCGGAATCTGGTTCTTCTTCTTCGTCGACTTCAATGGCGGCTTCTCGTGACCGTAAATCCACGAGGAATCGGAGAGGAGAATTTGCGTATTGAGAGGGGAACAAGAACAAGAGAGAAATGAGTAGCGAAATTACGGAGTTACCCTTTTGTAATATAGTAAATGACGTTTTTGTCCTTGTGAGTTTTTTTTTTTTTTTTCTTTCTTCTTTTTGGTGTGCTCCCTAAAAGAGAAGCCATTAATCCATGAATGAAATGGTGAGCTCCCGCATTTTGGCTACTTCCTTGTCGGACAGTTTTTGGCGTTTTCTTTACCTCTCACGAGCCGTAAAAATGGTCAAATTATG

Coding sequence (CDS)

ATGGTCGGTTTAAGCGTGATTCTGGAATCCAACCAGGGAGATTTTTGTAATAAATCATCCCAGGTTATCAGTAAAGCCTCCGTTATGAACCTCACCGTCAACTCCTCTTCTCGCAACCCTAATTCCTGCCTCCAGACGACGTCGCTTCGCCTCCATTCCTGCTATCTCTGTAATCAGAAGCTCTTGCCTGGGAAGGACATCTATATGTACAAGGGAGATAGGGGATTTTGCAGCGTGGAGTGTAGGTGCAGGCAGATTTTAATGGACGAAAAAGAGAGTATAATGAAGGAAAATTCATCGTCGAGTCGTTAA

Homology

[Close]

BLAST of CmoCh08G012090 vs. Swiss-Prot
Match: MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana GN=MARD1 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 2.7e-06
Identity = 22/56 (39.29%), Postives = 37/56 (66.07%), Query Frame = 1


Query: 40  PNSCLQTTSLR--LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKES 94
           P   ++T S    L  C+ C + L   +DIY+Y+G++GFCS ECR +++L+D+ E+
Sbjct: 208 PQPAMETKSTESFLSRCFTCKKNLDQKQDIYIYRGEKGFCSSECRYQEMLLDQMET 263

[Close]

BLAST of CmoCh08G012090 vs. TrEMBL
Match: A0A0S3RI40_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G328100 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.7e-21
Identity = 53/97 (54.64%), Postives = 73/97 (75.26%), Query Frame = 1


Query: 1  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQK 60
          M+GLSV+LE+ +G+   K+ QVISK +V++ ++N  S +  +  Q +   LH C+LC ++
Sbjct: 1  MLGLSVVLEAQKGNASKKTPQVISKTTVLS-SMNKHSPSAVNASQHSPTFLHQCFLCRKR 60

Query: 61 LLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKE 98
          LLPGKDIYMYKGDR FCSVECRC+QI MDE+ES  K+
Sbjct: 61 LLPGKDIYMYKGDRAFCSVECRCKQIFMDEEESFEKD 96

[Close]

BLAST of CmoCh08G012090 vs. TrEMBL
Match: A0A0D2T1S3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G192100 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.5e-21
Identity = 61/111 (54.95%), Postives = 76/111 (68.47%), Query Frame = 1


Query: 1   MVGLSVILES----NQGDFCNKSSQVISKASVMNLT---VNSSSRN------PNSCLQTT 60
           MVGLSV+LE+    N+  F  K+ Q+ISK +++  T   V+SSS +      P +   T 
Sbjct: 1   MVGLSVVLENQKSGNRNIFSKKTPQLISKTTMLINTSSKVSSSSSSSSRLSPPTTTSHTV 60

Query: 61  SLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKEN 99
              L  C+LC QKLLPGKDIYMYKGDRGFCSVECRCRQI MDE+ES+ +EN
Sbjct: 61  PSFLEQCFLCKQKLLPGKDIYMYKGDRGFCSVECRCRQIFMDEEESLKREN 111

[Close]

BLAST of CmoCh08G012090 vs. TrEMBL
Match: A0A0D2RGC6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G192100 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.5e-21
Identity = 61/111 (54.95%), Postives = 76/111 (68.47%), Query Frame = 1


Query: 1   MVGLSVILES----NQGDFCNKSSQVISKASVMNLT---VNSSSRN------PNSCLQTT 60
           MVGLSV+LE+    N+  F  K+ Q+ISK +++  T   V+SSS +      P +   T 
Sbjct: 1   MVGLSVVLENQKSGNRNIFSKKTPQLISKTTMLINTSSKVSSSSSSSSRLSPPTTTSHTV 60

Query: 61  SLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKEN 99
              L  C+LC QKLLPGKDIYMYKGDRGFCSVECRCRQI MDE+ES+ +EN
Sbjct: 61  PSFLEQCFLCKQKLLPGKDIYMYKGDRGFCSVECRCRQIFMDEEESLKREN 111

[Close]

BLAST of CmoCh08G012090 vs. TrEMBL
Match: V7B035_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G250000g PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.6e-21
Identity = 57/100 (57.00%), Postives = 75/100 (75.00%), Query Frame = 1


Query: 1  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVN---SSSRNPNSCLQTTSLRLHSCYLC 60
          MVGLSV+LE+ +G    K+ QVISK ++++ T+N   +SS + +S  Q  +  LH+C LC
Sbjct: 1  MVGLSVVLEAQRGSATKKTPQVISKTTMLS-TINKHSASSASHHSAFQEPTF-LHTCSLC 60

Query: 61 NQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKE 98
           ++LLPGKDIYMYKGDR FCSVECRC+QI MDE+ES  KE
Sbjct: 61 RKRLLPGKDIYMYKGDRAFCSVECRCKQIFMDEEESFEKE 98

[Close]

BLAST of CmoCh08G012090 vs. TrEMBL
Match: A0A0B0PS25_GOSAR (SET and MYND domain-containing OS=Gossypium arboreum GN=F383_32656 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.6e-21
Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 1


Query: 1   MVGLSVILES----NQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLR------ 60
           MVGLSV+LE+    N   F  K+ Q+ISK +++   +N+SS+  +S   ++ L       
Sbjct: 1   MVGLSVVLENQKSGNHNIFSKKTPQLISKTTML---INTSSKVSSSSSSSSRLSPPTTTS 60

Query: 61  ------LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKEN 99
                 L  C+LC QKLLPGKDIYMYKGDRGFCSVECRCRQI MDE+ES+ KEN
Sbjct: 61  HMVPSFLEQCFLCKQKLLPGKDIYMYKGDRGFCSVECRCRQIFMDEEESLKKEN 111

[Close]

BLAST of CmoCh08G012090 vs. TAIR10
Match: AT5G49120.1 (AT5G49120.1 Protein of unknown function (DUF581))

HSP 1 Score: 88.2 bits (217), Expect = 3.2e-18
Identity = 52/119 (43.70%), Postives = 73/119 (61.34%), Query Frame = 1


Query: 1   MVGLSVILE---------SNQGDFCNK---------SSQVISKASVMNLT-VNSSSRNPN 60
           MVGLS++LE         +N  +  NK         S +V++KA+++  T V + + N  
Sbjct: 1   MVGLSIVLEMTNNNNNNNNNNNNNNNKNPLSEGVLISPKVVNKANIIVTTAVTTDTTNLR 60

Query: 61  SCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS 101
            C Q +    H C+LC +KLLP KDIYMYKGDR FCSVECR +Q++MDE+ES+ +E  S
Sbjct: 61  RCYQDSGFLEH-CFLCRRKLLPAKDIYMYKGDRAFCSVECRSKQMIMDEEESLRREYCS 118

[Close]

BLAST of CmoCh08G012090 vs. TAIR10
Match: AT1G22160.1 (AT1G22160.1 Protein of unknown function (DUF581))

HSP 1 Score: 61.6 bits (148), Expect = 3.2e-10
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 1


Query: 51  LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSSSS 103
           L SC LC + L+ G+DIYMY+GDR FCS+ECR +QI +DE++   K +  S+
Sbjct: 79  LRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDERKEKKKGSVRST 130

[Close]

BLAST of CmoCh08G012090 vs. TAIR10
Match: AT1G78020.1 (AT1G78020.1 Protein of unknown function (DUF581))

HSP 1 Score: 60.5 bits (145), Expect = 7.2e-10
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 1


Query: 51  LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKE 93
           L SC LC + L+PG+DIYMY+GD+ FCS ECR  Q+  DE++
Sbjct: 90  LRSCALCERLLVPGRDIYMYRGDKAFCSSECRQEQMAQDERK 131

[Close]

BLAST of CmoCh08G012090 vs. TAIR10
Match: AT1G53885.1 (AT1G53885.1 Protein of unknown function (DUF581))

HSP 1 Score: 60.5 bits (145), Expect = 7.2e-10
Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 1


Query: 1  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQK 60
          M  +SV L+    D   K + ++ K+S   L +N S  NPN    +    L +C+LCN++
Sbjct: 1  MTKISVGLQLVTRDSREKLNNIVIKSS---LRLNRS--NPNI---SELCFLKTCHLCNKQ 60

Query: 61 LLPGKDIYMYKGDRGFCSVECRCRQILMDEKESI 95
          L   KD+YMY+GD GFCS ECR  Q+L+D+++ +
Sbjct: 61 LHQDKDVYMYRGDLGFCSRECRESQMLIDDRKEL 86

[Close]

BLAST of CmoCh08G012090 vs. TAIR10
Match: AT1G53903.1 (AT1G53903.1 Protein of unknown function (DUF581))

HSP 1 Score: 60.5 bits (145), Expect = 7.2e-10
Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 1


Query: 1  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQK 60
          M  +SV L+    D   K + ++ K+S   L +N S  NPN    +    L +C+LCN++
Sbjct: 1  MTKISVGLQLVTRDSREKLNNIVIKSS---LRLNRS--NPNI---SELCFLKTCHLCNKQ 60

Query: 61 LLPGKDIYMYKGDRGFCSVECRCRQILMDEKESI 95
          L   KD+YMY+GD GFCS ECR  Q+L+D+++ +
Sbjct: 61 LHQDKDVYMYRGDLGFCSRECRESQMLIDDRKEL 86

[Close]

BLAST of CmoCh08G012090 vs. NCBI nr
Match: gi|659117086|ref|XP_008458414.1| (PREDICTED: cell wall integrity and stress response component 1 isoform X1 [Cucumis melo])

HSP 1 Score: 118.2 bits (295), Expect = 8.3e-24
Identity = 64/103 (62.14%), Postives = 75/103 (72.82%), Query Frame = 1


Query: 1   MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQK 60
           MVGLSVILESNQGDF  K     +   + NLT+N S     S L+T S RLHSC+LC  K
Sbjct: 1   MVGLSVILESNQGDFPKKPYS--TSILLTNLTLNYSK----SSLKTPSSRLHSCFLCQHK 60

Query: 61  LLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSSSSR 104
           LLPG DIYMYKGDRGFCS ECR +QI MDE+ES MK+N++S +
Sbjct: 61  LLPGNDIYMYKGDRGFCSEECRRKQIFMDEEESFMKDNNNSRK 97

[Close]

BLAST of CmoCh08G012090 vs. NCBI nr
Match: gi|1009163265|ref|XP_015899872.1| (PREDICTED: uncharacterized protein LOC107433133 [Ziziphus jujuba])

HSP 1 Score: 109.8 bits (273), Expect = 2.9e-21
Identity = 64/113 (56.64%), Postives = 76/113 (67.26%), Query Frame = 1


Query: 1   MVGLSVILESNQGDFCNKSSQVISKASVM--NLTVNSSSRNPNSCL--------QTTSLR 60
           MVGLSV+LES +     K  QVI+K ++M  N   +SSS +    L        QT+SL 
Sbjct: 1   MVGLSVVLESQKSSVSKKIPQVINKTTMMISNSKPSSSSSSTMPPLSYPQRNFSQTSSLT 60

Query: 61  ---LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS 101
              L  C+LCNQKLLPGKDIYMY+GDR FCSVECRCRQI MDE+ESI K+N S
Sbjct: 61  PTFLDQCFLCNQKLLPGKDIYMYRGDRAFCSVECRCRQIFMDEEESIRKDNCS 113

[Close]

BLAST of CmoCh08G012090 vs. NCBI nr
Match: gi|965664574|dbj|BAT80283.1| (hypothetical protein VIGAN_02328100 [Vigna angularis var. angularis])

HSP 1 Score: 109.4 bits (272), Expect = 3.8e-21
Identity = 53/97 (54.64%), Postives = 73/97 (75.26%), Query Frame = 1


Query: 1  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQK 60
          M+GLSV+LE+ +G+   K+ QVISK +V++ ++N  S +  +  Q +   LH C+LC ++
Sbjct: 1  MLGLSVVLEAQKGNASKKTPQVISKTTVLS-SMNKHSPSAVNASQHSPTFLHQCFLCRKR 60

Query: 61 LLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKE 98
          LLPGKDIYMYKGDR FCSVECRC+QI MDE+ES  K+
Sbjct: 61 LLPGKDIYMYKGDRAFCSVECRCKQIFMDEEESFEKD 96

[Close]

BLAST of CmoCh08G012090 vs. NCBI nr
Match: gi|763802695|gb|KJB69633.1| (hypothetical protein B456_011G192100 [Gossypium raimondii])

HSP 1 Score: 109.0 bits (271), Expect = 5.0e-21
Identity = 61/111 (54.95%), Postives = 76/111 (68.47%), Query Frame = 1


Query: 1   MVGLSVILES----NQGDFCNKSSQVISKASVMNLT---VNSSSRN------PNSCLQTT 60
           MVGLSV+LE+    N+  F  K+ Q+ISK +++  T   V+SSS +      P +   T 
Sbjct: 1   MVGLSVVLENQKSGNRNIFSKKTPQLISKTTMLINTSSKVSSSSSSSSRLSPPTTTSHTV 60

Query: 61  SLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKEN 99
              L  C+LC QKLLPGKDIYMYKGDRGFCSVECRCRQI MDE+ES+ +EN
Sbjct: 61  PSFLEQCFLCKQKLLPGKDIYMYKGDRGFCSVECRCRQIFMDEEESLKREN 111

[Close]

BLAST of CmoCh08G012090 vs. NCBI nr
Match: gi|823249817|ref|XP_012457522.1| (PREDICTED: uncharacterized protein LOC105778379 [Gossypium raimondii])

HSP 1 Score: 109.0 bits (271), Expect = 5.0e-21
Identity = 61/111 (54.95%), Postives = 76/111 (68.47%), Query Frame = 1


Query: 1   MVGLSVILES----NQGDFCNKSSQVISKASVMNLT---VNSSSRN------PNSCLQTT 60
           MVGLSV+LE+    N+  F  K+ Q+ISK +++  T   V+SSS +      P +   T 
Sbjct: 1   MVGLSVVLENQKSGNRNIFSKKTPQLISKTTMLINTSSKVSSSSSSSSRLSPPTTTSHTV 60

Query: 61  SLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKEN 99
              L  C+LC QKLLPGKDIYMYKGDRGFCSVECRCRQI MDE+ES+ +EN
Sbjct: 61  PSFLEQCFLCKQKLLPGKDIYMYKGDRGFCSVECRCRQIFMDEEESLKREN 111

The following BLAST results are available for this feature:

BLAST of CmoCh08G012090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MARD1_ARATH	2.7e-06	39.29	Protein MARD1 OS=Arabidopsis thaliana GN=MARD1 PE=2 SV=2	[more]

BLAST of CmoCh08G012090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0S3RI40_PHAAN	2.7e-21	54.64	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G328100 PE=...	[more]
A0A0D2T1S3_GOSRA	3.5e-21	54.95	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G192100 PE=4 SV=1	[more]
A0A0D2RGC6_GOSRA	3.5e-21	54.95	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G192100 PE=4 SV=1	[more]
V7B035_PHAVU	4.6e-21	57.00	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G250000g PE=4 SV=1	[more]
A0A0B0PS25_GOSAR	4.6e-21	52.63	SET and MYND domain-containing OS=Gossypium arboreum GN=F383_32656 PE=4 SV=1	[more]

BLAST of CmoCh08G012090 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49120.1	3.2e-18	43.70	Protein of unknown function (DUF581)	[more]
AT1G22160.1	3.2e-10	51.92	Protein of unknown function (DUF581)	[more]
AT1G78020.1	7.2e-10	57.14	Protein of unknown function (DUF581)	[more]
AT1G53885.1	7.2e-10	39.36	Protein of unknown function (DUF581)	[more]
AT1G53903.1	7.2e-10	39.36	Protein of unknown function (DUF581)	[more]

BLAST of CmoCh08G012090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117086\|ref\|XP_008458414.1\|	8.3e-24	62.14	PREDICTED: cell wall integrity and stress response component 1 isoform X1 [Cucum...	[more]
gi\|1009163265\|ref\|XP_015899872.1\|	2.9e-21	56.64	PREDICTED: uncharacterized protein LOC107433133 [Ziziphus jujuba]	[more]
gi\|965664574\|dbj\|BAT80283.1\|	3.8e-21	54.64	hypothetical protein VIGAN_02328100 [Vigna angularis var. angularis]	[more]
gi\|763802695\|gb\|KJB69633.1\|	5.0e-21	54.95	hypothetical protein B456_011G192100 [Gossypium raimondii]	[more]
gi\|823249817\|ref\|XP_012457522.1\|	5.0e-21	54.95	PREDICTED: uncharacterized protein LOC105778379 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007650	Zf-FLZ_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G012090.1	CmoCh08G012090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007650	Zf-FLZ domain	PFAM	PF04570	zf-FLZ	coord: 50..91 score: 2.2
None	No IPR available	PANTHER	PTHR33059	FAMILY NOT NAMED	coord: 21..100 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G012090	Cucsa.069190	Cucumber (Gy14) v1	cgycmoB0107
CmoCh08G012090	Cucsa.252940	Cucumber (Gy14) v1	cgycmoB0720
CmoCh08G012090	CmaCh06G015130	Cucurbita maxima (Rimu)	cmacmoB837
CmoCh08G012090	CmaCh08G012340	Cucurbita maxima (Rimu)	cmacmoB912
CmoCh08G012090	Cla009292	Watermelon (97103) v1	cmowmB867
CmoCh08G012090	Csa3G164460	Cucumber (Chinese Long) v2	cmocuB872
CmoCh08G012090	Csa6G319750	Cucumber (Chinese Long) v2	cmocuB891
CmoCh08G012090	MELO3C021315	Melon (DHL92) v3.5.1	cmomeB800
CmoCh08G012090	MELO3C006678	Melon (DHL92) v3.5.1	cmomeB832
CmoCh08G012090	ClCG06G005010	Watermelon (Charleston Gray)	cmowcgB799
CmoCh08G012090	ClCG05G006210	Watermelon (Charleston Gray)	cmowcgB792
CmoCh08G012090	CSPI03G14580	Wild cucumber (PI 183967)	cmocpiB883
CmoCh08G012090	CSPI06G17530	Wild cucumber (PI 183967)	cmocpiB904
CmoCh08G012090	Lsi05G015520	Bottle gourd (USVL1VR-Ls)	cmolsiB819
CmoCh08G012090	Lsi09G014430	Bottle gourd (USVL1VR-Ls)	cmolsiB797
CmoCh08G012090	Cp4.1LG08g04960	Cucurbita pepo (Zucchini)	cmocpeB866
CmoCh08G012090	MELO3C021315.2	Melon (DHL92) v3.6.1	cmomedB903
CmoCh08G012090	MELO3C006678.2	Melon (DHL92) v3.6.1	cmomedB940
CmoCh08G012090	CsaV3_6G023890	Cucumber (Chinese Long) v3	cmocucB1056
CmoCh08G012090	CsaV3_3G014820	Cucumber (Chinese Long) v3	cmocucB1032
CmoCh08G012090	Cla97C05G087760	Watermelon (97103) v2	cmowmbB887
CmoCh08G012090	Cla97C06G114490	Watermelon (97103) v2	cmowmbB896
CmoCh08G012090	Bhi01G000733	Wax gourd	cmowgoB1104
CmoCh08G012090	Bhi12G001810	Wax gourd	cmowgoB1092
CmoCh08G012090	CsGy6G016960	Cucumber (Gy14) v2	cgybcmoB855
CmoCh08G012090	CsGy3G014730	Cucumber (Gy14) v2	cgybcmoB421
CmoCh08G012090	Carg17331	Silver-seed gourd	carcmoB0826
CmoCh08G012090	Carg18851	Silver-seed gourd	carcmoB0960

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh08G012090	CmoCh06G015090	Cucurbita moschata (Rifu)	cmocmoB484

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G012090	Silver-seed gourd	carcmoB0104
CmoCh08G012090	Silver-seed gourd	carcmoB0391
CmoCh08G012090	Cucumber (Chinese Long) v3	cmocucB1029
CmoCh08G012090	Cucurbita moschata (Rifu)	cmocmoB232
CmoCh08G012090	Cucurbita moschata (Rifu)	cmocmoB233
CmoCh08G012090	Cucurbita moschata (Rifu)	cmocmoB310
CmoCh08G012090	Cucurbita maxima (Rimu)	cmacmoB279
CmoCh08G012090	Cucurbita maxima (Rimu)	cmacmoB365
CmoCh08G012090	Watermelon (97103) v1	cmowmB856
CmoCh08G012090	Cucurbita pepo (Zucchini)	cmocpeB833
CmoCh08G012090	Cucurbita pepo (Zucchini)	cmocpeB852
CmoCh08G012090	Cucurbita pepo (Zucchini)	cmocpeB862
CmoCh08G012090	Bottle gourd (USVL1VR-Ls)	cmolsiB808
CmoCh08G012090	Cucumber (Gy14) v2	cgybcmoB255