Carg16431 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16431
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Upf0057 membrane protein
Location	Cucurbita_argyrosperma_scaffold_130 : 423948 .. 424359 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAACGGATGTGAGATCTTCTGCGAAATTCTCATCGCCATTCTTATTCCTCCTCTCGGAGTCTGCCTCAAACACGGCTGTTGCACGGTAATCTTAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCGTCTCTCTCTGTAATTTCCTCCGCTAATCTGAACTTACGATGACCTAAAACAGCCGACGAGACGATCTGATCTAAAACAGACGAAATTAGGTTTCAGTTTCGGTCTAATTTTGTGTGTAATTGCAGGTGGAATTTTGTCTCTGTTTGATTTTGACTCTGCTCGGTTACATTCCGGGGATCATATACGCTCTCTACTCCATCGTGTTTGTCGATCGCGATCATTTCTTCGACGAGTACAGGCGTCCGCTCTATTCGCCGGTGCCGACGGTGTAG

mRNA sequence

ATGGCGAACGGATGTGAGATCTTCTGCGAAATTCTCATCGCCATTCTTATTCCTCCTCTCGGAGTCTGCCTCAAACACGGCTGTTGCACGGTGGAATTTTGTCTCTGTTTGATTTTGACTCTGCTCGGTTACATTCCGGGGATCATATACGCTCTCTACTCCATCGTGTTTGTCGATCGCGATCATTTCTTCGACGAGTACAGGCGTCCGCTCTATTCGCCGGTGCCGACGGTGTAG

Coding sequence (CDS)

ATGGCGAACGGATGTGAGATCTTCTGCGAAATTCTCATCGCCATTCTTATTCCTCCTCTCGGAGTCTGCCTCAAACACGGCTGTTGCACGGTGGAATTTTGTCTCTGTTTGATTTTGACTCTGCTCGGTTACATTCCGGGGATCATATACGCTCTCTACTCCATCGTGTTTGTCGATCGCGATCATTTCTTCGACGAGTACAGGCGTCCGCTCTATTCGCCGGTGCCGACGGTGTAG

Protein sequence

MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDRDHFFDEYRRPLYSPVPTV

Homology

[Close]

BLAST of Carg16431 vs. NCBI nr
Match: XP_022938010.1 (UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022938011.1 UPF0057 membrane protein At4g30660-like [Cucurbita moschata])

HSP 1 Score: 165.2 bits (417), Expect = 8.7e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR
Sbjct: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60

Query: 61 DHFFDEYRRPLYSPVPTV 79
          DHFFDEYRRPLYSPVPTV
Sbjct: 61 DHFFDEYRRPLYSPVPTV 78

[Close]

BLAST of Carg16431 vs. NCBI nr
Match: XP_022969587.1 (UPF0057 membrane protein At4g30660-like [Cucurbita maxima] >XP_022969588.1 UPF0057 membrane protein At4g30660-like [Cucurbita maxima])

HSP 1 Score: 162.2 bits (409), Expect = 7.3e-37
Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          MAN CEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR
Sbjct: 1  MANRCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60

Query: 61 DHFFDEYRRPLYSPVPTV 79
          DHFFDEYRRPLYSPVPTV
Sbjct: 61 DHFFDEYRRPLYSPVPTV 78

[Close]

BLAST of Carg16431 vs. NCBI nr
Match: XP_022158160.1 (UPF0057 membrane protein At2g24040-like [Momordica charantia])

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-33
Identity = 71/78 (91.03%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          MANGCEI CEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGY+PGIIYALY+IVFVDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYVPGIIYALYAIVFVDR 60

Query: 61 DHFFDEYRRPLYSPVPTV 79
          D FFDEYRRPLY+PV  V
Sbjct: 61 DQFFDEYRRPLYAPVSAV 78

[Close]

BLAST of Carg16431 vs. NCBI nr
Match: XP_022946545.1 (UPF0057 membrane protein At2g24040-like [Cucurbita moschata] >XP_022999789.1 UPF0057 membrane protein At2g24040-like [Cucurbita maxima] >XP_023523032.1 UPF0057 membrane protein At2g24040-like [Cucurbita pepo subsp. pepo] >XP_023546587.1 UPF0057 membrane protein At2g24040-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.1 bits (370), Expect = 2.4e-32
Identity = 70/78 (89.74%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          MANGCEI CEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALY+IV+VDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60

Query: 61 DHFFDEYRRPLYSPVPTV 79
          D FFDEYRRPLYS    V
Sbjct: 61 DQFFDEYRRPLYSQASAV 78

[Close]

BLAST of Carg16431 vs. NCBI nr
Match: XP_011648896.1 (PREDICTED: UPF0057 membrane protein At4g30660-like [Cucumis sativus] >KGN61055.1 hypothetical protein Csa_2G036040 [Cucumis sativus])

HSP 1 Score: 140.2 bits (352), Expect = 3.0e-30
Identity = 66/75 (88.00%), Postives = 69/75 (92.00%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          M NGCEI CEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYA+Y+I FVDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DHFFDEYRRPLYSPV 76
          D FFDEYRRPLYS V
Sbjct: 61 DQFFDEYRRPLYSSV 75

[Close]

BLAST of Carg16431 vs. TAIR10
Match: AT4G28088.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 134.4 bits (337), Expect = 3.0e-32
Identity = 61/72 (84.72%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          MANGCEI CEI+IAILIPPLGVCL+HGCCT EF +CLILTLLGY+PGIIYALY+IV+VDR
Sbjct: 1  MANGCEICCEIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYALYAIVYVDR 60

Query: 61 DHFFDEYRRPLY 73
          D FFDEYRRPL+
Sbjct: 61 DQFFDEYRRPLF 72

[Close]

BLAST of Carg16431 vs. TAIR10
Match: AT2G24040.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 119.8 bits (299), Expect = 7.6e-28
Identity = 52/72 (72.22%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          MA+ CE+ CEI IAIL+PP+GVCL+HGCCTVEF +CLILT LGY+PGIIYA+Y+I F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DHFFDEYRRPLY 73
          D +FDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of Carg16431 vs. TAIR10
Match: AT4G30660.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 117.5 bits (293), Expect = 3.8e-27
Identity = 51/73 (69.86%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DHFFDEYRRPLYS 74
          + +FDEYRRP+YS
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Carg16431 vs. TAIR10
Match: AT4G30650.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 101.3 bits (251), Expect = 2.8e-22
Identity = 47/61 (77.05%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          MA+  E+FCEILIAIL+PPLGVCLK GCCTVEF +CL+LT+LGYIPGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Carg16431 vs. TAIR10
Match: AT2G38905.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 68.9 bits (167), Expect = 1.5e-12
Identity = 34/53 (64.15%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 4  GCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIV 57
          G E F EI++AIL+PP+GV L++G C VEF +CL+LT+LGYIPGIIYA+Y +V
Sbjct: 2  GSETFLEIILAILLPPVGVFLRYG-CGVEFWICLLLTILGYIPGIIYAIYVLV 53

[Close]

BLAST of Carg16431 vs. Swiss-Prot
Match: sp|O82232|RC22_ARATH (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.4e-26
Identity = 52/72 (72.22%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          MA+ CE+ CEI IAIL+PP+GVCL+HGCCTVEF +CLILT LGY+PGIIYA+Y+I F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DHFFDEYRRPLY 73
          D +FDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of Carg16431 vs. Swiss-Prot
Match: sp|Q9SUI0|RC24_ARATH (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 6.8e-26
Identity = 51/73 (69.86%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DHFFDEYRRPLYS 74
          + +FDEYRRP+YS
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Carg16431 vs. Swiss-Prot
Match: sp|Q9M095|RC23_ARATH (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.0e-21
Identity = 47/61 (77.05%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          MA+  E+FCEILIAIL+PPLGVCLK GCCTVEF +CL+LT+LGYIPGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Carg16431 vs. Swiss-Prot
Match: sp|Q9LRI7|OSR8_ORYSJ (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.8e-17
Identity = 41/68 (60.29%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 1  MANG-CEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVD 60
          MA+G C  F EIL+AI++PPLGV L+ GCC++EFC+CL+LT+LGY+PGIIYA+Y +V +D
Sbjct: 1  MASGRCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALD 60

Query: 61 RDHFFDEY 68
           D +  EY
Sbjct: 61 SDQYQREY 68

[Close]

BLAST of Carg16431 vs. Swiss-Prot
Match: sp|Q9ZNQ7|RCI2A_ARATH (Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.2e-10
Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 8  FCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALY 54
          F +I+IAIL+PPLGV L+ G C VEF +CL+LTLLGYIPGIIYA+Y
Sbjct: 6  FVDIIIAILLPPLGVFLRFG-CGVEFWICLVLTLLGYIPGIIYAIY 50

[Close]

BLAST of Carg16431 vs. TrEMBL
Match: tr|A0A0A0LGN1|A0A0A0LGN1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036040 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-30
Identity = 66/75 (88.00%), Postives = 69/75 (92.00%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          M NGCEI CEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYA+Y+I FVDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DHFFDEYRRPLYSPV 76
          D FFDEYRRPLYS V
Sbjct: 61 DQFFDEYRRPLYSSV 75

[Close]

BLAST of Carg16431 vs. TrEMBL
Match: tr|A0A1S3BTY7|A0A1S3BTY7_CUCME (UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103493660 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.4e-30
Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          M NGCEI CEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYA+Y+I FVDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DHFFDEYRRPLYS 74
          D FFDEYRRPLYS
Sbjct: 61 DQFFDEYRRPLYS 73

[Close]

BLAST of Carg16431 vs. TrEMBL
Match: tr|A0A1S3B9R0|A0A1S3B9R0_CUCME (UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.7e-30
Identity = 61/74 (82.43%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          M + CEIFCEILIAILIPPLGVCL+HGCCTVEFC+CL+LT LGY+PGIIYALY+IVF+DR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DHFFDEYRRPLYSP 75
          D +FDEYRRPLY+P
Sbjct: 61 DEYFDEYRRPLYAP 74

[Close]

BLAST of Carg16431 vs. TrEMBL
Match: tr|A0A2N9FWW4|A0A2N9FWW4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19620 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.5e-30
Identity = 63/74 (85.14%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          MAN CEIFCEILIAIL+PPLGVCL+HGCC+VEF LCL+LT+LGYIPGIIYALY+IVFVDR
Sbjct: 1  MANRCEIFCEILIAILLPPLGVCLRHGCCSVEFWLCLLLTILGYIPGIIYALYAIVFVDR 60

Query: 61 DHFFDEYRRPLYSP 75
          D +FDEYRRPLY+P
Sbjct: 61 DQYFDEYRRPLYAP 74

[Close]

BLAST of Carg16431 vs. TrEMBL
Match: tr|A0A2H5P874|A0A2H5P874_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_112610 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-29
Identity = 59/76 (77.63%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60
          M   CEIFCEILIA+L+PP+GVCL+HGCC+VEFC+CL+LT+LGY+PGIIYALY+IVFVDR
Sbjct: 1  MPTRCEIFCEILIAVLLPPVGVCLRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFVDR 60

Query: 61 DHFFDEYRRPLYSPVP 77
          D +FDEYRRPLY+P P
Sbjct: 61 DEYFDEYRRPLYAPGP 76

The following BLAST results are available for this feature:

BLAST of Carg16431 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938010.1	8.7e-38	100.00	UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022938011.1 UPF...	[more]
XP_022969587.1	7.3e-37	98.72	UPF0057 membrane protein At4g30660-like [Cucurbita maxima] >XP_022969588.1 UPF00...	[more]
XP_022158160.1	1.3e-33	91.03	UPF0057 membrane protein At2g24040-like [Momordica charantia]	[more]
XP_022946545.1	2.4e-32	89.74	UPF0057 membrane protein At2g24040-like [Cucurbita moschata] >XP_022999789.1 UPF...	[more]
XP_011648896.1	3.0e-30	88.00	PREDICTED: UPF0057 membrane protein At4g30660-like [Cucumis sativus] >KGN61055.1...	[more]

BLAST of Carg16431 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28088.1	3.0e-32	84.72	Low temperature and salt responsive protein family	[more]
AT2G24040.1	7.6e-28	72.22	Low temperature and salt responsive protein family	[more]
AT4G30660.1	3.8e-27	69.86	Low temperature and salt responsive protein family	[more]
AT4G30650.1	2.8e-22	77.05	Low temperature and salt responsive protein family	[more]
AT2G38905.1	1.5e-12	64.15	Low temperature and salt responsive protein family	[more]

BLAST of Carg16431 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O82232\|RC22_ARATH	1.4e-26	72.22	UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 ...	[more]
sp\|Q9SUI0\|RC24_ARATH	6.8e-26	69.86	UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 ...	[more]
sp\|Q9M095\|RC23_ARATH	5.0e-21	77.05	UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 ...	[more]
sp\|Q9LRI7\|OSR8_ORYSJ	5.8e-17	60.29	Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 S...	[more]
sp\|Q9ZNQ7\|RCI2A_ARATH	5.2e-10	71.74	Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1	[more]

BLAST of Carg16431 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LGN1\|A0A0A0LGN1_CUCSA	2.0e-30	88.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036040 PE=4 SV=1	[more]
tr\|A0A1S3BTY7\|A0A1S3BTY7_CUCME	4.4e-30	89.04	UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103493660 PE=4 ...	[more]
tr\|A0A1S3B9R0\|A0A1S3B9R0_CUCME	5.7e-30	82.43	UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=4 ...	[more]
tr\|A0A2N9FWW4\|A0A2N9FWW4_FAGSY	7.5e-30	85.14	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19620 PE=4 SV=1	[more]
tr\|A0A2H5P874\|A0A2H5P874_CITUN	1.7e-29	77.63	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_112610 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR000612	PMP3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16431-RA	Carg16431-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 9..56 e-value: 8.9E-17 score: 60.9
IPR000612	Proteolipid membrane potential modulator	PANTHER	PTHR21659	HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED	coord: 1..72
IPR000612	Proteolipid membrane potential modulator	PROSITE	PS01309	UPF0057	coord: 12..27
None	No IPR available	PANTHER	PTHR21659:SF34	LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN	coord: 1..72

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16431	Cla018743	Watermelon (97103) v1	carwmB0915
Carg16431	Cla020019	Watermelon (97103) v1	carwmB0913
Carg16431	Csa2G036040	Cucumber (Chinese Long) v2	carcuB0929
Carg16431	MELO3C004127	Melon (DHL92) v3.5.1	carmeB0900
Carg16431	MELO3C010211	Melon (DHL92) v3.5.1	carmeB0898
Carg16431	ClCG06G012500	Watermelon (Charleston Gray)	carwcgB0892
Carg16431	ClCG02G014410	Watermelon (Charleston Gray)	carwcgB0889
Carg16431	CSPI01G17820	Wild cucumber (PI 183967)	carcpiB0951
Carg16431	CSPI02G05240	Wild cucumber (PI 183967)	carcpiB0952
Carg16431	Cucsa.090120	Cucumber (Gy14) v1	carcgyB1029
Carg16431	CmaCh12G008530	Cucurbita maxima (Rimu)	carcmaB1254
Carg16431	CmaCh05G010310	Cucurbita maxima (Rimu)	carcmaB1255
Carg16431	CmaCh11G004520	Cucurbita maxima (Rimu)	carcmaB1253
Carg16431	CmoCh05G010430	Cucurbita moschata (Rifu)	carcmoB1224
Carg16431	CmoCh12G008570	Cucurbita moschata (Rifu)	carcmoB1223
Carg16431	Lsi11G006900	Bottle gourd (USVL1VR-Ls)	carlsiB829
Carg16431	Cp4.1LG11g08400	Cucurbita pepo (Zucchini)	carcpeB1260
Carg16431	CsGy1G017970	Cucumber (Gy14) v2	carcgybB0901
Carg16431	CsGy2G005380	Cucumber (Gy14) v2	carcgybB0902
Carg16431	MELO3C010211.2	Melon (DHL92) v3.6.1	carmedB0907
Carg16431	MELO3C004127.2	Melon (DHL92) v3.6.1	carmedB0908
Carg16431	CsaV3_2G007590	Cucumber (Chinese Long) v3	carcucB0952
Carg16431	CsaV3_1G029080	Cucumber (Chinese Long) v3	carcucB0951
Carg16431	Cla97C02G040170	Watermelon (97103) v2	carwmbB0955
Carg16431	Cla97C06G121730	Watermelon (97103) v2	carwmbB0959
Carg16431	Bhi06G001223	Wax gourd	carwgoB1054

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg16431	Carg14080	Silver-seed gourd	carcarB493
Carg16431	Carg11967	Silver-seed gourd	carcarB523

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16431	Cucurbita pepo (Zucchini)	carcpeB1263
Carg16431	Watermelon (97103) v1	carwmB0912