Carg14825 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCGATTCTTCTCGATTGAACCTCACTCGTTCGTTTTTAGATTCTCGCCATCGCCGCCGGCCGATTCGAGTTTACAGGCTTTTGAGGTGATTGATTTTTTTGTTCTTGATTTTCTGATTTGATTCTTCGGTTTCTCTGATTTTGTATTTACAGAGTTTGTGGTTTGTTTTCAGGAGGATGAGATTCAAGAAGGAAGAGGCGAATACGGCGGGCGTTAAGGTAGAGATGGAGATCAAGAATTTGAAACTGTACATGGAGAATCAGAGCATTATTGAGGAGAACGAGAGGCTGAGGAAGAAAGCGTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAAGCAAAAACCACAGCCTAGCTCCAATTTGAGCGCCTGGCTCGAAAATTGA ATGTGCGATTCTTCTCGATTGAACCTCACTCGTTCGTTTTTAGATTCTCGCCATCGCCGCCGGCCGATTCGAGTTTACAGGCTTTTGAGGAGGATGAGATTCAAGAAGGAAGAGGCGAATACGGCGGGCGTTAAGGTAGAGATGGAGATCAAGAATTTGAAACTGTACATGGAGAATCAGAGCATTATTGAGGAGAACGAGAGGCTGAGGAAGAAAGCGTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAAGCAAAAACCACAGCCTAGCTCCAATTTGAGCGCCTGGCTCGAAAATTGA ATGTGCGATTCTTCTCGATTGAACCTCACTCGTTCGTTTTTAGATTCTCGCCATCGCCGCCGGCCGATTCGAGTTTACAGGCTTTTGAGGAGGATGAGATTCAAGAAGGAAGAGGCGAATACGGCGGGCGTTAAGGTAGAGATGGAGATCAAGAATTTGAAACTGTACATGGAGAATCAGAGCATTATTGAGGAGAACGAGAGGCTGAGGAAGAAAGCGTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAAGCAAAAACCACAGCCTAGCTCCAATTTGAGCGCCTGGCTCGAAAATTGA MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSNLSAWLEN
BLAST of Carg14825 vs. NCBI nr
Match: XP_022924351.1 (protein LITTLE ZIPPER 1-like [Cucurbita moschata]) HSP 1 Score: 203.4 bits (516), Expect = 3.9e-49 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Carg14825 vs. NCBI nr
Match: XP_022980450.1 (protein LITTLE ZIPPER 1-like [Cucurbita maxima]) HSP 1 Score: 201.8 bits (512), Expect = 1.1e-48 Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0
BLAST of Carg14825 vs. NCBI nr
Match: XP_023527865.1 (protein LITTLE ZIPPER 1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 200.7 bits (509), Expect = 2.6e-48 Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0
BLAST of Carg14825 vs. NCBI nr
Match: XP_023527864.1 (protein LITTLE ZIPPER 2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 146.0 bits (367), Expect = 7.5e-32 Identity = 77/80 (96.25%), Postives = 78/80 (97.50%), Query Frame = 0
BLAST of Carg14825 vs. NCBI nr
Match: KGN56585.1 (hypothetical protein Csa_3G125520 [Cucumis sativus]) HSP 1 Score: 143.7 bits (361), Expect = 3.7e-31 Identity = 85/105 (80.95%), Postives = 89/105 (84.76%), Query Frame = 0
BLAST of Carg14825 vs. TAIR10
Match: AT2G45450.1 (protein binding) HSP 1 Score: 60.5 bits (145), Expect = 7.5e-10 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of Carg14825 vs. TAIR10
Match: AT3G52770.1 (protein binding) HSP 1 Score: 42.4 bits (98), Expect = 2.1e-04 Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 0
BLAST of Carg14825 vs. Swiss-Prot
Match: sp|F4IG60|ZPR1_ARATH (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of Carg14825 vs. Swiss-Prot
Match: sp|Q9LZX5|ZPR2_ARATH (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.2e-06 Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Carg14825 vs. Swiss-Prot
Match: sp|Q56WL5|ZPR4_ARATH (Protein LITTLE ZIPPER 4 OS=Arabidopsis thaliana OX=3702 GN=ZPR4 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 5.9e-04 Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of Carg14825 vs. TrEMBL
Match: tr|A0A0A0L3S0|A0A0A0L3S0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G125520 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.5e-31 Identity = 85/105 (80.95%), Postives = 89/105 (84.76%), Query Frame = 0
BLAST of Carg14825 vs. TrEMBL
Match: tr|A0A2N9JBG7|A0A2N9JBG7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61836 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12 Identity = 54/94 (57.45%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of Carg14825 vs. TrEMBL
Match: tr|A0A2P5AFA9|A0A2P5AFA9_PARAD (Protein LITTLE ZIPPER OS=Parasponia andersonii OX=3476 GN=PanWU01x14_338220 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.0e-12 Identity = 47/73 (64.38%), Postives = 55/73 (75.34%), Query Frame = 0
BLAST of Carg14825 vs. TrEMBL
Match: tr|A0A2P5RFN8|A0A2P5RFN8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD17458 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.3e-12 Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of Carg14825 vs. TrEMBL
Match: tr|A0A1U8K349|A0A1U8K349_GOSHI (protein LITTLE ZIPPER 3-like OS=Gossypium hirsutum OX=3635 GN=LOC107911920 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.7e-11 Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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