CmaCh15G011780 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTATACTGTGTCCCGTGAGTCTACACACAGTCTATATAAGTATTGGCTTTAGTCCTACTGTTTCCCCTGCAACTTCCTTGCATTATTCAACTAGAAAGGAAGGGCAAAAGTTAAGAAGCTGCATAGAAGAATAATGTGCATCAGTGCAACGCAGAGTATTCTGTTCCATCAAATTCAGACTTCCAAGAACAGGAGACGATCAAAAAGATCCAAACTTCAAGTTCTAAGGCTTACCAGGTTGCTTTCTTACAGAACCCATTTCACTTCTTTTATGTTTTGGGGGCCTTTTGATTCATTTGAAAGTGATGGGGTTTTGTTTTTGTGTTTAGCAGGAGGAGATGTGAAGAGAAGCTGGGGAAAGACATTGAGCTGAAGAATCTGCAGCTATATATGAAGAATCAGACCATAATCAAAGAGAATGATAAGCTGAGAGAGAAAGCCAATATCCTTCATCAAGAGAACATAGCTTTAATGACTGAGTTTCAGAAAAAATTCCCACATTTGAATCAGAGAAAATGATGAGAATCATAAGAGCTTGACATGGTTGATTATCATCAGGGTTGCTAGTCTTGCTTGTTTCATTGCTTTAGTACCTTTACTTTCCATCAAAAAATGAAAAACAGTACTCCATATAACATAATTTTGTTCATCAATTTGGGCGATTCTCTACTTGGGGTAGATTTAAGAGTCTTAGCTAAACATGGTCGAAACAACCGAAGTCGTTTCGAGAAGAAAGAACTCAAGTTTAGTCCACAACATGATATCAACTGAGGAAGGTTCAGAAATATCCAGATCTACTATAGAAAACTATGG TTATACTGTGTCCCGTGAGTCTACACACAGTCTATATAAGTATTGGCTTTAGTCCTACTGTTTCCCCTGCAACTTCCTTGCATTATTCAACTAGAAAGGAAGGGCAAAAGTTAAGAAGCTGCATAGAAGAATAATGTGCATCAGTGCAACGCAGAGTATTCTGTTCCATCAAATTCAGACTTCCAAGAACAGGAGACGATCAAAAAGATCCAAACTTCAAGTTCTAAGGCTTACCAGCAGGAGGAGATGTGAAGAGAAGCTGGGGAAAGACATTGAGCTGAAGAATCTGCAGCTATATATGAAGAATCAGACCATAATCAAAGAGAATGATAAGCTGAGAGAGAAAGCCAATATCCTTCATCAAGAGAACATAGCTTTAATGACTGAGTTTCAGAAAAAATTCCCACATTTGAATCAGAGAAAATGATGAGAATCATAAGAGCTTGACATGGTTGATTATCATCAGGGTTGCTAGTCTTGCTTGTTTCATTGCTTTAGTACCTTTACTTTCCATCAAAAAATGAAAAACAGTACTCCATATAACATAATTTTGTTCATCAATTTGGGCGATTCTCTACTTGGGGTAGATTTAAGAGTCTTAGCTAAACATGGTCGAAACAACCGAAGTCGTTTCGAGAAGAAAGAACTCAAGTTTAGTCCACAACATGATATCAACTGAGGAAGGTTCAGAAATATCCAGATCTACTATAGAAAACTATGG ATGTGCATCAGTGCAACGCAGAGTATTCTGTTCCATCAAATTCAGACTTCCAAGAACAGGAGACGATCAAAAAGATCCAAACTTCAAGTTCTAAGGCTTACCAGCAGGAGGAGATGTGAAGAGAAGCTGGGGAAAGACATTGAGCTGAAGAATCTGCAGCTATATATGAAGAATCAGACCATAATCAAAGAGAATGATAAGCTGAGAGAGAAAGCCAATATCCTTCATCAAGAGAACATAGCTTTAATGACTGAGTTTCAGAAAAAATTCCCACATTTGAATCAGAGAAAATGA MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYMKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
BLAST of CmaCh15G011780 vs. Swiss-Prot
Match: ZPR1_ARATH (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana GN=ZPR1 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 7.3e-06 Identity = 35/89 (39.33%), Postives = 57/89 (64.04%), Query Frame = 1
BLAST of CmaCh15G011780 vs. TrEMBL
Match: A0A0A0KKF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157390 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.1e-35 Identity = 82/97 (84.54%), Postives = 91/97 (93.81%), Query Frame = 1
BLAST of CmaCh15G011780 vs. TrEMBL
Match: B9RBV5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1681400 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.6e-20 Identity = 54/95 (56.84%), Postives = 78/95 (82.11%), Query Frame = 1
BLAST of CmaCh15G011780 vs. TrEMBL
Match: A0A061GBU8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_016107 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 3.1e-19 Identity = 52/80 (65.00%), Postives = 72/80 (90.00%), Query Frame = 1
BLAST of CmaCh15G011780 vs. TrEMBL
Match: D7TWD1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g05030 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 6.9e-19 Identity = 54/95 (56.84%), Postives = 74/95 (77.89%), Query Frame = 1
BLAST of CmaCh15G011780 vs. TrEMBL
Match: A0A0D2QUS4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G167900 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.2e-17 Identity = 54/96 (56.25%), Postives = 77/96 (80.21%), Query Frame = 1
BLAST of CmaCh15G011780 vs. TAIR10
Match: AT3G60890.2 (AT3G60890.2 protein binding) HSP 1 Score: 55.1 bits (131), Expect = 2.8e-08 Identity = 32/72 (44.44%), Postives = 53/72 (73.61%), Query Frame = 1
BLAST of CmaCh15G011780 vs. TAIR10
Match: AT2G45450.1 (AT2G45450.1 protein binding) HSP 1 Score: 51.2 bits (121), Expect = 4.1e-07 Identity = 35/89 (39.33%), Postives = 57/89 (64.04%), Query Frame = 1
BLAST of CmaCh15G011780 vs. NCBI nr
Match: gi|700195003|gb|KGN50180.1| (hypothetical protein Csa_5G157390 [Cucumis sativus]) HSP 1 Score: 157.1 bits (396), Expect = 1.5e-35 Identity = 82/97 (84.54%), Postives = 91/97 (93.81%), Query Frame = 1
BLAST of CmaCh15G011780 vs. NCBI nr
Match: gi|659074649|ref|XP_008437719.1| (PREDICTED: uncharacterized protein LOC103483063 [Cucumis melo]) HSP 1 Score: 156.4 bits (394), Expect = 2.6e-35 Identity = 81/97 (83.51%), Postives = 92/97 (94.85%), Query Frame = 1
BLAST of CmaCh15G011780 vs. NCBI nr
Match: gi|1000983493|ref|XP_015584519.1| (PREDICTED: protein LITTLE ZIPPER 2 isoform X1 [Ricinus communis]) HSP 1 Score: 111.7 bits (278), Expect = 7.3e-22 Identity = 55/95 (57.89%), Postives = 79/95 (83.16%), Query Frame = 1
BLAST of CmaCh15G011780 vs. NCBI nr
Match: gi|255537145|ref|XP_002509639.1| (PREDICTED: protein LITTLE ZIPPER 2 isoform X2 [Ricinus communis]) HSP 1 Score: 105.5 bits (262), Expect = 5.2e-20 Identity = 54/95 (56.84%), Postives = 78/95 (82.11%), Query Frame = 1
BLAST of CmaCh15G011780 vs. NCBI nr
Match: gi|590677466|ref|XP_007040023.1| (Uncharacterized protein TCM_016107 [Theobroma cacao]) HSP 1 Score: 102.4 bits (254), Expect = 4.4e-19 Identity = 52/80 (65.00%), Postives = 72/80 (90.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |