Carg14756 (gene) Silver-seed gourd

Overview
NameCarg14756
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat
LocationCucurbita_argyrosperma_scaffold_048 : 891768 .. 893147 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGACCCAGAAATTGATTTCACCCTTTCGTCTGTGTTCCCTTCTTCGTCTCCAGAAGGATCCTAAACTCGCTTTTCAACTCTTCCTGAACCCTAATCCCAGTTCTACAAAACCCCCCAAACCTTTTCGTTACTCTTTACTTTCCTATGATCTCATCATCACCAAGCTCGGGCGTGCTAAGATGTTCGATGAAATGGAAGAAATCCTCCATCAGCTGAAGCAAGAGACTCGGTTTGCTCCTCACGAGATTATCTTCTGTAATGTCATTTCGTTCTATGGTCGAGCCCGCCTCCTTGACCGTGCCTTTCAAGTGTTTGATAAAATTCCATCCTTCGGTTGCAAGCGGACGGTGAAATCAGCGAATTCGTTGTTGGATGCGTTGTTGAAGTGCAGGGAGTTTGAGAAAATGGCGGAAGTTTTTGTGGGCATTGGTAACTATGGCTCCCCTGATGCTTGTACTTTTAACATTTTGATTCATGCTGCTTGTTTGTGTGGGGATTTGGATGATGCATGGGAGGTGTTCGATGAAATGCCAAAGAGAGGTGCGAAGCCGAATGTGGTCACTTTTGGAACTTTGATTTATGGACTTTCTCTGAATTCTAAGTTGGATGAAGCATTAAGGTTGAAAGAGGATATGGTGAGAGTCTACAGGATTTTGCCGAATGCGTCCATATATGCTACATTGATCAAAGGGTTCTGTGGGATTGGAGATTTGAATTTGGCTTTCAAGCTAAAAGAGGAGATGGTGACTAACAAGGTAAAACTGGACTCGGCAATTTATTCTACTTTCATCAGTGCATTCTTCAAACATGGTAGGAAAGAAGAAGTTCCTGAGATTTTAGCAGAAATGGGAGAGAACGGGTGCAAACCAGACACGGTCACCTACAATGCCATGATCAATGGGCAATGTAAAGAGAACGATCTTGAATCTGCATATAGAGTTTTGGATGAGATGGTGAAGAAAGGGTGTAAGCCAGATGTGATCAGTTTCAATACAATCATGGGGAGGTTATGCAAGGAGGGGAAATGGGATAAGGCTATGGACTTGCTTGCAGATATGCCGAGACGAGGTTGCTCTCCTGATGTGGTATCATACAGGACTCTTTTTGATGGGCTATGTGAAATGATGCAGTTACAGGAAGCAACTTCGATACTGGACGAGATGATCTTCAAGGGCTACGTGCCTCGTTCCGAGAGCATAAACAAACTCGTAGACAGGTTGTGCCAGGAATCCAACATGGAGCTGTTGTGGATGGTTGTAAACAGTCTAGCAAGAGGAAATGTCATGAATGTGGATATATGGGCAAGAGTTGTGGCTTTTGTTTGCAAGGAGAAGGCATCAGAAGCCTCCAAGTTATGTGATTTATTGATTAGTTAA

mRNA sequence

ATGAAGACCCAGAAATTGATTTCACCCTTTCGTCTGTGTTCCCTTCTTCGTCTCCAGAAGGATCCTAAACTCGCTTTTCAACTCTTCCTGAACCCTAATCCCAGTTCTACAAAACCCCCCAAACCTTTTCGTTACTCTTTACTTTCCTATGATCTCATCATCACCAAGCTCGGGCGTGCTAAGATGTTCGATGAAATGGAAGAAATCCTCCATCAGCTGAAGCAAGAGACTCGGTTTGCTCCTCACGAGATTATCTTCTGTAATGTCATTTCGTTCTATGGTCGAGCCCGCCTCCTTGACCGTGCCTTTCAAGTGTTTGATAAAATTCCATCCTTCGGTTGCAAGCGGACGGTGAAATCAGCGAATTCGTTGTTGGATGCGTTGTTGAAGTGCAGGGAGTTTGAGAAAATGGCGGAAGTTTTTGTGGGCATTGGTAACTATGGCTCCCCTGATGCTTGTACTTTTAACATTTTGATTCATGCTGCTTGTTTGTGTGGGGATTTGGATGATGCATGGGAGGTGTTCGATGAAATGCCAAAGAGAGGTGCGAAGCCGAATGTGGTCACTTTTGGAACTTTGATTTATGGACTTTCTCTGAATTCTAAGTTGGATGAAGCATTAAGGTTGAAAGAGGATATGGTGAGAGTCTACAGGATTTTGCCGAATGCGTCCATATATGCTACATTGATCAAAGGGTTCTGTGGGATTGGAGATTTGAATTTGGCTTTCAAGCTAAAAGAGGAGATGGTGACTAACAAGGTAAAACTGGACTCGGCAATTTATTCTACTTTCATCAGTGCATTCTTCAAACATGGTAGGAAAGAAGAAGTTCCTGAGATTTTAGCAGAAATGGGAGAGAACGGGTGCAAACCAGACACGGTCACCTACAATGCCATGATCAATGGGCAATGTAAAGAGAACGATCTTGAATCTGCATATAGAGTTTTGGATGAGATGGTGAAGAAAGGGTGTAAGCCAGATGTGATCAGTTTCAATACAATCATGGGGAGGTTATGCAAGGAGGGGAAATGGGATAAGGCTATGGACTTGCTTGCAGATATGCCGAGACGAGGTTGCTCTCCTGATGTGGTATCATACAGGACTCTTTTTGATGGGCTATGTGAAATGATGCAGTTACAGGAAGCAACTTCGATACTGGACGAGATGATCTTCAAGGGCTACGTGCCTCGTTCCGAGAGCATAAACAAACTCGTAGACAGGTTGTGCCAGGAATCCAACATGGAGCTGTTGTGGATGGTTGTAAACAGTCTAGCAAGAGGAAATGTCATGAATGTGGATATATGGGCAAGAGTTGTGGCTTTTGTTTGCAAGGAGAAGGCATCAGAAGCCTCCAAGTTATGTGATTTATTGATTAGTTAA

Coding sequence (CDS)

ATGAAGACCCAGAAATTGATTTCACCCTTTCGTCTGTGTTCCCTTCTTCGTCTCCAGAAGGATCCTAAACTCGCTTTTCAACTCTTCCTGAACCCTAATCCCAGTTCTACAAAACCCCCCAAACCTTTTCGTTACTCTTTACTTTCCTATGATCTCATCATCACCAAGCTCGGGCGTGCTAAGATGTTCGATGAAATGGAAGAAATCCTCCATCAGCTGAAGCAAGAGACTCGGTTTGCTCCTCACGAGATTATCTTCTGTAATGTCATTTCGTTCTATGGTCGAGCCCGCCTCCTTGACCGTGCCTTTCAAGTGTTTGATAAAATTCCATCCTTCGGTTGCAAGCGGACGGTGAAATCAGCGAATTCGTTGTTGGATGCGTTGTTGAAGTGCAGGGAGTTTGAGAAAATGGCGGAAGTTTTTGTGGGCATTGGTAACTATGGCTCCCCTGATGCTTGTACTTTTAACATTTTGATTCATGCTGCTTGTTTGTGTGGGGATTTGGATGATGCATGGGAGGTGTTCGATGAAATGCCAAAGAGAGGTGCGAAGCCGAATGTGGTCACTTTTGGAACTTTGATTTATGGACTTTCTCTGAATTCTAAGTTGGATGAAGCATTAAGGTTGAAAGAGGATATGGTGAGAGTCTACAGGATTTTGCCGAATGCGTCCATATATGCTACATTGATCAAAGGGTTCTGTGGGATTGGAGATTTGAATTTGGCTTTCAAGCTAAAAGAGGAGATGGTGACTAACAAGGTAAAACTGGACTCGGCAATTTATTCTACTTTCATCAGTGCATTCTTCAAACATGGTAGGAAAGAAGAAGTTCCTGAGATTTTAGCAGAAATGGGAGAGAACGGGTGCAAACCAGACACGGTCACCTACAATGCCATGATCAATGGGCAATGTAAAGAGAACGATCTTGAATCTGCATATAGAGTTTTGGATGAGATGGTGAAGAAAGGGTGTAAGCCAGATGTGATCAGTTTCAATACAATCATGGGGAGGTTATGCAAGGAGGGGAAATGGGATAAGGCTATGGACTTGCTTGCAGATATGCCGAGACGAGGTTGCTCTCCTGATGTGGTATCATACAGGACTCTTTTTGATGGGCTATGTGAAATGATGCAGTTACAGGAAGCAACTTCGATACTGGACGAGATGATCTTCAAGGGCTACGTGCCTCGTTCCGAGAGCATAAACAAACTCGTAGACAGGTTGTGCCAGGAATCCAACATGGAGCTGTTGTGGATGGTTGTAAACAGTCTAGCAAGAGGAAATGTCATGAATGTGGATATATGGGCAAGAGTTGTGGCTTTTGTTTGCAAGGAGAAGGCATCAGAAGCCTCCAAGTTATGTGATTTATTGATTAGTTAA

Protein sequence

MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRAKMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKSANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGAKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRILPNASIYATLIKGFCGIGDLNLAFKLKEEMVTNKVKLDSAIYSTFISAFFKHGRKEEVPEILAEMGENGCKPDTVTYNAMINGQCKENDLESAYRVLDEMVKKGCKPDVISFNTIMGRLCKEGKWDKAMDLLADMPRRGCSPDVVSYRTLFDGLCEMMQLQEATSILDEMIFKGYVPRSESINKLVDRLCQESNMELLWMVVNSLARGNVMNVDIWARVVAFVCKEKASEASKLCDLLIS
Homology
[Close]
BLAST of Carg14756 vs. NCBI nr
Match: XP_022941521.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita moschata])

HSP 1 Score: 466.5 bits (1199), Expect = 1.1e-127
Identity = 455/459 (99.13%), Postives = 455/459 (99.13%), Query Frame = 0 

Query: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60
           MKT KLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA
Sbjct: 19  MKTHKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 78

Query: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120
           KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS
Sbjct: 79  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 138

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180
           ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK
Sbjct: 139 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 198

Query: 181 RGAKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRILXXXXXXXXXXXXXXXXXXXX 240
           RG KPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYR  XXXXXXXXXXXXXXXXXXXX
Sbjct: 199 RGVKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRXXXXXXXXXXXXXXXXXXXXXX 258

Query: 241 XXXXXXXXXXTNKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXTNKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 259 XXXXXXXXXXTNKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 318

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 319 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 378

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLWMV 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLWMV
Sbjct: 379 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLWMV 438

Query: 421 VNSLARGNVMNVDIWARVVAFVCKEKASEASKLCDLLIS 460
           VNSLARGNVMNVDIWARVVAFVCKEKASEASKLCDLLIS
Sbjct: 439 VNSLARGNVMNVDIWARVVAFVCKEKASEASKLCDLLIS 477

[Close]
BLAST of Carg14756 vs. NCBI nr
Match: XP_022982178.1 (putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita maxima])

HSP 1 Score: 454.9 bits (1169), Expect = 3.2e-124
Identity = 448/459 (97.60%), Postives = 452/459 (98.47%), Query Frame = 0 

Query: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60
           MKT KLISPFRLCSLLRLQKDPKLAFQLFLNPNP+STKPPKPFRYSLLSYDLIITKLGRA
Sbjct: 1   MKTHKLISPFRLCSLLRLQKDPKLAFQLFLNPNPNSTKPPKPFRYSLLSYDLIITKLGRA 60

Query: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120
           KMFDEMEEILHQLKQETRF+PHEIIFCNVISFYGRARLLDRAFQVFDKIPS+GCKRTVKS
Sbjct: 61  KMFDEMEEILHQLKQETRFSPHEIIFCNVISFYGRARLLDRAFQVFDKIPSYGCKRTVKS 120

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180
           ANSLLDALLKCREFE+MAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK
Sbjct: 121 ANSLLDALLKCREFERMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180

Query: 181 RGAKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRILXXXXXXXXXXXXXXXXXXXX 240
           RG KPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRI XXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RGVKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRIXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXTNKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXTNKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXTNKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLWMV 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLWMV
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLWMV 420

Query: 421 VNSLARGNVMNVDIWARVVAFVCKEKASEASKLCDLLIS 460
            NSL RGNVMNVDIWARVVAFVCKEK SEASKL DLLIS
Sbjct: 421 ANSLGRGNVMNVDIWARVVAFVCKEKPSEASKLVDLLIS 459

[Close]
BLAST of Carg14756 vs. NCBI nr
Match: XP_023523314.1 (putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438.7 bits (1127), Expect = 2.4e-119
Identity = 442/459 (96.30%), Postives = 445/459 (96.95%), Query Frame = 0 

Query: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60
           MKT KLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA
Sbjct: 1   MKTHKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60

Query: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120
           KMFDEMEEILHQLKQETRFAP+EIIFCNVISFYGRARLLDRAFQVFDKIPS+GCKRTVKS
Sbjct: 61  KMFDEMEEILHQLKQETRFAPNEIIFCNVISFYGRARLLDRAFQVFDKIPSYGCKRTVKS 120

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180
           ANSLLDALLKCREFEKMAEVFV IGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK
Sbjct: 121 ANSLLDALLKCREFEKMAEVFVSIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180

Query: 181 RGAKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRILXXXXXXXXXXXXXXXXXXXX 240
           RG KPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRV    XXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RGVKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXTNKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXTNKVKL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXTNKVKLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLWMV 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    V
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 420

Query: 421 VNSLARGNVMNVDIWARVVAFVCKEKASEASKLCDLLIS 460
           +NSL RGNVMNVDIWARVVAFVCK KASEASKLCDLLIS
Sbjct: 421 LNSLGRGNVMNVDIWARVVAFVCKVKASEASKLCDLLIS 459

[Close]
BLAST of Carg14756 vs. NCBI nr
Match: XP_004146077.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 3.8e-101
Identity = 186/217 (85.71%), Postives = 196/217 (90.32%), Query Frame = 0 

Query: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60
           MKTQK ISPFRL SLLRLQKDP LA QLFLNPNPSS++PPKPFRYSLLSYDLII+KLGRA
Sbjct: 69  MKTQKPISPFRLSSLLRLQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRA 128

Query: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120
           KMFDEMEEIL QLKQETRFAPHE+IFCNVI+FYGRA L DRAFQVF++IPSF CKRTVKS
Sbjct: 129 KMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKS 188

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180
            NSLL ALLK R+ EKM +VFV I NYGSPDACTFNILIHAACLCGDLD  W VFDEM K
Sbjct: 189 VNSLLAALLKNRQLEKMTQVFVDISNYGSPDACTFNILIHAACLCGDLDAVWGVFDEMQK 248

Query: 181 RGAKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVY 218
           RG KPNVVTFGTLIYGLSLNSKL EALRLKEDMV+VY
Sbjct: 249 RGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVY 285

[Close]
BLAST of Carg14756 vs. NCBI nr
Match: XP_008452430.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Cucumis melo])

HSP 1 Score: 377.9 bits (969), Expect = 5.0e-101
Identity = 185/213 (86.85%), Postives = 196/213 (92.02%), Query Frame = 0 

Query: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60
           MKTQK ISPFRL SLLRL+KDPKLA QLFLNPNPSS++PPKPFRYSLLSYDLII+KLGRA
Sbjct: 67  MKTQKPISPFRLSSLLRLEKDPKLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRA 126

Query: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120
           KMFDEMEEIL QLKQETRFAPHE+IFCNVI+FYGRARL DRAFQVF++IP+F CKRTVKS
Sbjct: 127 KMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRARLPDRAFQVFERIPTFRCKRTVKS 186

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180
            NSLLDALLK REF KM EV VGIGN+GSPDACTFNILIHAACLCGDLD  W VFDEM K
Sbjct: 187 VNSLLDALLKSREFGKMMEVLVGIGNHGSPDACTFNILIHAACLCGDLDAVWGVFDEMRK 246

Query: 181 RGAKPNVVTFGTLIYGLSLNSKLDEALRLKEDM 214
           RG +PNVVTFGTLIYGLSLNSKL EALRLKEDM
Sbjct: 247 RGVQPNVVTFGTLIYGLSLNSKLKEALRLKEDM 279

[Close]
BLAST of Carg14756 vs. TAIR10
Match: AT1G53330.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 219.5 bits (558), Expect = 4.1e-57
Identity = 105/181 (58.01%), Postives = 130/181 (71.82%), Query Frame = 0 

Query: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60
           M   K +S FRL SLLR + DP  A +LF NP+P ST P +PFRYSLL YD+IITKLG +
Sbjct: 1   MSAVKSVSSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGS 60

Query: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120
           KMFDE++++L  LK +TR  P EIIFCNVI+F+GR +L  RA  +FD++P + C+RTVKS
Sbjct: 61  KMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKS 120

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180
            NSLL ALLKC E EKM E    I  +G PDACT+NILIH     G  DDA ++FDEM K
Sbjct: 121 LNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVK 180

Query: 181 R 182
           +
Sbjct: 181 K 181

[Close]
BLAST of Carg14756 vs. TAIR10
Match: AT3G14580.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 105.9 bits (263), Expect = 6.7e-23
Identity = 61/184 (33.15%), Postives = 101/184 (54.89%), Query Frame = 0 

Query: 7   ISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRAKMFDEM 66
           ++P  +  +    KDP      FL P        K ++ +   Y L+I K G+AKM+DE+
Sbjct: 60  LAPNEVLKIFDNVKDPS-----FLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEI 119

Query: 67  EEILHQLKQETRFAPHEIIFCNVISFYGR-ARLLDRAFQVFDKIPSFGCKRTVKSANSLL 126
           EE++  +K E R    E  F N++  YG  A  ++RA ++   +P FGC  + KS N +L
Sbjct: 120 EEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFIL 179

Query: 127 DALLKCREFEKMAEVFVGIGNYG-SPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGAK 186
           + L+  + F+++ ++FV     G   DAC  NILI   C  G+L+ A ++ DE P++ ++
Sbjct: 180 NLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSR 238

Query: 187 PNVV 189
           PNV+
Sbjct: 240 PNVM 238

[Close]
BLAST of Carg14756 vs. TAIR10
Match: AT2G18520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 93.6 bits (231), Expect = 3.4e-19
Identity = 59/204 (28.92%), Postives = 106/204 (51.96%), Query Frame = 0 

Query: 14  SLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRAKMFDEMEEILHQL 73
           S LR  +DP  A  ++ + + +ST P    RY++   +L + +L +++ F ++E ++   
Sbjct: 38  SKLRKVQDPDKALAIYKSVSNNSTSPLSS-RYAM---ELTVQRLAKSQRFSDIEALIESH 97

Query: 74  KQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKSANSLLDALLKCRE 133
           K   +    E     +I  YGRA + D A ++F+++   G  RTV S N+LL A L    
Sbjct: 98  KNNPKIKT-ETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDL 157

Query: 134 FEKMAEVFVGIG---NYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGAKPNVVTF 193
           FE++ ++F       N  +PD  ++ +LI + C  G  + A E+  +M  +G +  ++ F
Sbjct: 158 FERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAF 217

Query: 194 GTLIYGLSLNSKLDEALRLKEDMV 215
            T++  L  N  +DEA  L  +MV
Sbjct: 218 TTILGSLYKNGLVDEAESLWIEMV 236

[Close]
BLAST of Carg14756 vs. TAIR10
Match: AT5G18475.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 93.6 bits (231), Expect = 3.4e-19
Identity = 65/215 (30.23%), Postives = 115/215 (53.49%), Query Frame = 0 

Query: 5   KLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRAKMFD 64
           K IS     SL++ ++DP+    +F     +     K F ++  +Y +++  L R K F 
Sbjct: 52  KFISHESAVSLMKRERDPQGVLDIF-----NKASQQKGFNHNNATYSVLLDNLVRHKKFL 111

Query: 65  EMEEILHQLKQET-RFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFG-CKRTVKSAN 124
            ++ ILHQ+K ET RF   E +F N++  + R+ L D+  ++F+ I      K ++ + +
Sbjct: 112 AVDAILHQMKYETCRF--QESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAIS 171

Query: 125 SLLDALLKCREFEKMAEVFV-GIGNYG-SPDACTFNILIHAACLCGDLDDAWEVFDEMPK 184
           + L+ L+   E     ++ +    N G  P+ C FNIL+   C  GD++ A+ V +EM +
Sbjct: 172 TCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKR 231

Query: 185 RG-AKPNVVTFGTLIYGLSLNSKLDEALRLKEDMV 215
            G + PN +T+ TL+  L  +S+  EA+ L EDM+
Sbjct: 232 SGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMI 259

[Close]
BLAST of Carg14756 vs. TAIR10
Match: AT2G17525.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 90.1 bits (222), Expect = 3.8e-18
Identity = 62/204 (30.39%), Postives = 96/204 (47.06%), Query Frame = 0 

Query: 15  LLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRAKMFDEMEEILHQLK 74
           ++RL  D K A         +ST P   F +S  +Y  +  KL   + FD + ++L ++ 
Sbjct: 46  IVRLILDQKSASGALETFRWASTFP--GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMP 105

Query: 75  QETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKSANSLLDALLK---- 134
                 P + IF  +I  +GRARL+ R   V D +  FG K ++K  NS+LD L+K    
Sbjct: 106 DSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDID 165

Query: 135 -CREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGAKPNVVT 194
             REF       +  G +G  D  T+ IL+    L   + D +++   M   G  PN V 
Sbjct: 166 IAREF--FTRKMMASGIHG--DVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVV 225

Query: 195 FGTLIYGLSLNSKLDEALRLKEDM 214
           + TL++ L  N K+  A  L  +M
Sbjct: 226 YNTLLHALCKNGKVGRARSLMSEM 243

[Close]
BLAST of Carg14756 vs. Swiss-Prot
Match: sp|Q9MAG8|PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana OX=3702 GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.5e-56
Identity = 105/181 (58.01%), Postives = 130/181 (71.82%), Query Frame = 0 

Query: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60
           M   K +S FRL SLLR + DP  A +LF NP+P ST P +PFRYSLL YD+IITKLG +
Sbjct: 1   MSAVKSVSSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGS 60

Query: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120
           KMFDE++++L  LK +TR  P EIIFCNVI+F+GR +L  RA  +FD++P + C+RTVKS
Sbjct: 61  KMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKS 120

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180
            NSLL ALLKC E EKM E    I  +G PDACT+NILIH     G  DDA ++FDEM K
Sbjct: 121 LNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVK 180

Query: 181 R 182
           +
Sbjct: 181 K 181

[Close]
BLAST of Carg14756 vs. Swiss-Prot
Match: sp|Q9LUD6|PP230_ARATH (Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g14580 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.2e-21
Identity = 61/184 (33.15%), Postives = 101/184 (54.89%), Query Frame = 0 

Query: 7   ISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRAKMFDEM 66
           ++P  +  +    KDP      FL P        K ++ +   Y L+I K G+AKM+DE+
Sbjct: 60  LAPNEVLKIFDNVKDPS-----FLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEI 119

Query: 67  EEILHQLKQETRFAPHEIIFCNVISFYGR-ARLLDRAFQVFDKIPSFGCKRTVKSANSLL 126
           EE++  +K E R    E  F N++  YG  A  ++RA ++   +P FGC  + KS N +L
Sbjct: 120 EEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFIL 179

Query: 127 DALLKCREFEKMAEVFVGIGNYG-SPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGAK 186
           + L+  + F+++ ++FV     G   DAC  NILI   C  G+L+ A ++ DE P++ ++
Sbjct: 180 NLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSR 238

Query: 187 PNVV 189
           PNV+
Sbjct: 240 PNVM 238

[Close]
BLAST of Carg14756 vs. Swiss-Prot
Match: sp|Q9ZU67|PP162_ARATH (Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g18520 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 6.2e-18
Identity = 59/204 (28.92%), Postives = 106/204 (51.96%), Query Frame = 0 

Query: 14  SLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRAKMFDEMEEILHQL 73
           S LR  +DP  A  ++ + + +ST P    RY++   +L + +L +++ F ++E ++   
Sbjct: 38  SKLRKVQDPDKALAIYKSVSNNSTSPLSS-RYAM---ELTVQRLAKSQRFSDIEALIESH 97

Query: 74  KQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKSANSLLDALLKCRE 133
           K   +    E     +I  YGRA + D A ++F+++   G  RTV S N+LL A L    
Sbjct: 98  KNNPKIKT-ETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDL 157

Query: 134 FEKMAEVFVGIG---NYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGAKPNVVTF 193
           FE++ ++F       N  +PD  ++ +LI + C  G  + A E+  +M  +G +  ++ F
Sbjct: 158 FERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAF 217

Query: 194 GTLIYGLSLNSKLDEALRLKEDMV 215
            T++  L  N  +DEA  L  +MV
Sbjct: 218 TTILGSLYKNGLVDEAESLWIEMV 236

[Close]
BLAST of Carg14756 vs. Swiss-Prot
Match: sp|Q3E9F0|PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX=3702 GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 6.2e-18
Identity = 65/215 (30.23%), Postives = 115/215 (53.49%), Query Frame = 0 

Query: 5   KLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRAKMFD 64
           K IS     SL++ ++DP+    +F     +     K F ++  +Y +++  L R K F 
Sbjct: 52  KFISHESAVSLMKRERDPQGVLDIF-----NKASQQKGFNHNNATYSVLLDNLVRHKKFL 111

Query: 65  EMEEILHQLKQET-RFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFG-CKRTVKSAN 124
            ++ ILHQ+K ET RF   E +F N++  + R+ L D+  ++F+ I      K ++ + +
Sbjct: 112 AVDAILHQMKYETCRF--QESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAIS 171

Query: 125 SLLDALLKCREFEKMAEVFV-GIGNYG-SPDACTFNILIHAACLCGDLDDAWEVFDEMPK 184
           + L+ L+   E     ++ +    N G  P+ C FNIL+   C  GD++ A+ V +EM +
Sbjct: 172 TCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKR 231

Query: 185 RG-AKPNVVTFGTLIYGLSLNSKLDEALRLKEDMV 215
            G + PN +T+ TL+  L  +S+  EA+ L EDM+
Sbjct: 232 SGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMI 259

[Close]
BLAST of Carg14756 vs. Swiss-Prot
Match: sp|Q84VG6|PP160_ARATH (Pentatricopeptide repeat-containing protein At2g17525, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g17525 PE=2 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 6.8e-17
Identity = 62/204 (30.39%), Postives = 96/204 (47.06%), Query Frame = 0 

Query: 15  LLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRAKMFDEMEEILHQLK 74
           ++RL  D K A         +ST P   F +S  +Y  +  KL   + FD + ++L ++ 
Sbjct: 46  IVRLILDQKSASGALETFRWASTFP--GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMP 105

Query: 75  QETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKSANSLLDALLK---- 134
                 P + IF  +I  +GRARL+ R   V D +  FG K ++K  NS+LD L+K    
Sbjct: 106 DSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDID 165

Query: 135 -CREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGAKPNVVT 194
             REF       +  G +G  D  T+ IL+    L   + D +++   M   G  PN V 
Sbjct: 166 IAREF--FTRKMMASGIHG--DVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVV 225

Query: 195 FGTLIYGLSLNSKLDEALRLKEDM 214
           + TL++ L  N K+  A  L  +M
Sbjct: 226 YNTLLHALCKNGKVGRARSLMSEM 243

[Close]
BLAST of Carg14756 vs. TrEMBL
Match: tr|A0A1S3BT71|A0A1S3BT71_CUCME (putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucumis melo OX=3656 GN=LOC103493464 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.3e-101
Identity = 185/213 (86.85%), Postives = 196/213 (92.02%), Query Frame = 0 

Query: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60
           MKTQK ISPFRL SLLRL+KDPKLA QLFLNPNPSS++PPKPFRYSLLSYDLII+KLGRA
Sbjct: 67  MKTQKPISPFRLSSLLRLEKDPKLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRA 126

Query: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120
           KMFDEMEEIL QLKQETRFAPHE+IFCNVI+FYGRARL DRAFQVF++IP+F CKRTVKS
Sbjct: 127 KMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRARLPDRAFQVFERIPTFRCKRTVKS 186

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180
            NSLLDALLK REF KM EV VGIGN+GSPDACTFNILIHAACLCGDLD  W VFDEM K
Sbjct: 187 VNSLLDALLKSREFGKMMEVLVGIGNHGSPDACTFNILIHAACLCGDLDAVWGVFDEMRK 246

Query: 181 RGAKPNVVTFGTLIYGLSLNSKLDEALRLKEDM 214
           RG +PNVVTFGTLIYGLSLNSKL EALRLKEDM
Sbjct: 247 RGVQPNVVTFGTLIYGLSLNSKLKEALRLKEDM 279

[Close]
BLAST of Carg14756 vs. TrEMBL
Match: tr|A0A2I4GZ36|A0A2I4GZ36_9ROSI (putative pentatricopeptide repeat-containing protein At1g53330 OS=Juglans regia OX=51240 GN=LOC109012117 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.9e-83
Identity = 160/216 (74.07%), Postives = 175/216 (81.02%), Query Frame = 0 

Query: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60
           MK  K ISPFRL SLLRLQKDP LA QLF NPNP +  P KP RYSLLSYDLIITKLGRA
Sbjct: 1   MKPPKPISPFRLSSLLRLQKDPTLALQLFRNPNP-NFNPKKPLRYSLLSYDLIITKLGRA 60

Query: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120
           KMFDEME+ILHQLKQETRFAP EIIFCNVISFYGRA L DRA Q F+ I  + CKRTVKS
Sbjct: 61  KMFDEMEQILHQLKQETRFAPGEIIFCNVISFYGRANLPDRAIQTFESITGYRCKRTVKS 120

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180
           ANSLL+ALL+C EFEK+ E F+GI   G+PDACT+NILIHA C  G LDDAW VFDEM +
Sbjct: 121 ANSLLNALLRCGEFEKVRETFLGIYKDGTPDACTYNILIHACCRIGSLDDAWNVFDEMQR 180

Query: 181 RGAKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRV 217
           RG  PNVVTFGTL+Y L +N +L EA +LKEDMV V
Sbjct: 181 RGVFPNVVTFGTLMYQLCMNFRLKEAFQLKEDMVCV 215

[Close]
BLAST of Carg14756 vs. TrEMBL
Match: tr|A0A0A0KZF4|A0A0A0KZF4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G622790 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.9e-82
Identity = 162/218 (74.31%), Postives = 180/218 (82.57%), Query Frame = 0 

Query: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60
           MKTQK ISPFRL SLLRLQKDP LA QLFLNPNPSS++PPKPFRYSLLSYDLII+KLGRA
Sbjct: 69  MKTQKPISPFRLSSLLRLQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRA 128

Query: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120
           KMFDEMEEIL QLKQETRFAPHE+IFCNVI+FYGRA L DRAFQVF++IPSF CKRTVKS
Sbjct: 129 KMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKS 188

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLD---DAWEVFDE 180
            NSLL ALLK R+ EKM +VFV I NYGSPDACTFNILIHAACLCGDLD   +A  + ++
Sbjct: 189 VNSLLAALLKNRQLEKMTQVFVDISNYGSPDACTFNILIHAACLCGDLDALKEALRLKED 248

Query: 181 MPK-RGAKPNVVTFGTLIYGLSLNSKLDEALRLKEDMV 215
           M K    KPN   + TLI G     +L+ A +LKE+MV
Sbjct: 249 MVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMV 286

[Close]
BLAST of Carg14756 vs. TrEMBL
Match: tr|A0A2P5BGG9|A0A2P5BGG9_PARAD (Pentatricopeptide repeat OS=Parasponia andersonii OX=3476 GN=PanWU01x14_241150 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.9e-80
Identity = 152/219 (69.41%), Postives = 174/219 (79.45%), Query Frame = 0 

Query: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60
           M   K ISP RL SLLR QKDP LA QLF NPNP   + PKPFRYSLLSYD+IITKLGRA
Sbjct: 1   MSAPKAISPHRLSSLLRRQKDPNLALQLFQNPNP-QIQSPKPFRYSLLSYDIIITKLGRA 60

Query: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120
           KMFD+ME+IL QL +ETRF P EIIFCNVISFYGRARL  +AFQ+FD+IPSF C RTVKS
Sbjct: 61  KMFDQMEQILRQLSRETRFVPCEIIFCNVISFYGRARLPHKAFQMFDQIPSFRCDRTVKS 120

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180
            N++LD L KC E EKM E  VG+GN+ +PDACT+NILI+A C  G LDDAW  FDEM K
Sbjct: 121 YNTVLDVLFKCGEVEKMREFLVGLGNHVTPDACTYNILINACCKSGCLDDAWNTFDEMRK 180

Query: 181 RGAKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRI 220
           RG +PN VTF TLI GL  N +L+EA+RLKEDM+R+YR+
Sbjct: 181 RGVRPNGVTFATLISGLCANYRLEEAMRLKEDMIRLYRV 218

[Close]
BLAST of Carg14756 vs. TrEMBL
Match: tr|A0A2P5ELX5|A0A2P5ELX5_9ROSA (Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_176760 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.0e-78
Identity = 150/219 (68.49%), Postives = 172/219 (78.54%), Query Frame = 0 

Query: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60
           M   K ISP RL SLLR QKDP LA QLF NPNP   + PKPFRYSLLSYD+IITKLGRA
Sbjct: 1   MSAPKAISPHRLSSLLRRQKDPNLALQLFQNPNP-QIQSPKPFRYSLLSYDIIITKLGRA 60

Query: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120
           KMF +ME+IL QL +ETRF P EIIFCNVISFYGRARL  +A Q+FD+IPSF C RTVKS
Sbjct: 61  KMFHQMEQILRQLSRETRFVPGEIIFCNVISFYGRARLPHKALQMFDQIPSFRCDRTVKS 120

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180
            NS+LD L KC E EKM E  VG+GN+ +PDACT+NILI+A C  G L DAW +FDEM K
Sbjct: 121 YNSVLDVLFKCGEVEKMREFLVGLGNHVTPDACTYNILINACCKSGCLHDAWNMFDEMRK 180

Query: 181 RGAKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRI 220
           RG +PN VTF TLI GL  N +L+EA+RLKEDM+R+YR+
Sbjct: 181 RGVRPNGVTFATLISGLCANYRLEEAMRLKEDMIRLYRV 218

The following BLAST results are available for this feature:
BLAST of Carg14756 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022941521.11.1e-12799.13LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53... [more]
XP_022982178.13.2e-12497.60putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita maxima... [more]
XP_023523314.12.4e-11996.30putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita pepo s... [more]
XP_004146077.13.8e-10185.71PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Cucum... [more]
XP_008452430.15.0e-10186.85PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Cucum... [more]
BLAST of Carg14756 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G53330.14.1e-5758.01Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G14580.16.7e-2333.15Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G18520.13.4e-1928.92Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G18475.13.4e-1930.23Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G17525.13.8e-1830.39Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Carg14756 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9MAG8|PPR79_ARATH7.5e-5658.01Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis th... [more]
sp|Q9LUD6|PP230_ARATH1.2e-2133.15Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidop... [more]
sp|Q9ZU67|PP162_ARATH6.2e-1828.92Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidop... [more]
sp|Q3E9F0|PP392_ARATH6.2e-1830.23Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX... [more]
sp|Q84VG6|PP160_ARATH6.8e-1730.39Pentatricopeptide repeat-containing protein At2g17525, mitochondrial OS=Arabidop... [more]
BLAST of Carg14756 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BT71|A0A1S3BT71_CUCME3.3e-10186.85putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucumis melo O... [more]
tr|A0A2I4GZ36|A0A2I4GZ36_9ROSI6.9e-8374.07putative pentatricopeptide repeat-containing protein At1g53330 OS=Juglans regia ... [more]
tr|A0A0A0KZF4|A0A0A0KZF4_CUCSA5.9e-8274.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G622790 PE=4 SV=1[more]
tr|A0A2P5BGG9|A0A2P5BGG9_PARAD1.9e-8069.41Pentatricopeptide repeat OS=Parasponia andersonii OX=3476 GN=PanWU01x14_241150 P... [more]
tr|A0A2P5ELX5|A0A2P5ELX5_9ROSA1.0e-7868.49Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_176760 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14756-RACarg14756-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 150..197
e-value: 3.8E-15
score: 55.7
coord: 326..374
e-value: 1.9E-18
score: 66.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 85..114
e-value: 0.016
score: 15.3
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 287..320
e-value: 2.4E-14
score: 52.6
coord: 219..250
e-value: 4.1E-7
score: 29.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 188..222
e-value: 6.6E-4
score: 17.7
coord: 225..257
e-value: 4.3E-5
score: 21.4
coord: 364..396
e-value: 6.8E-5
score: 20.8
coord: 153..187
e-value: 1.5E-9
score: 35.5
coord: 329..363
e-value: 1.9E-10
score: 38.3
coord: 260..293
e-value: 7.9E-7
score: 26.9
coord: 294..328
e-value: 8.7E-12
score: 42.5
coord: 85..117
e-value: 5.1E-4
score: 18.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 397..431
score: 5.097
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 186..216
score: 8.254
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 46..76
score: 7.267
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 151..185
score: 13.395
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 222..256
score: 9.646
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 257..291
score: 11.312
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 292..326
score: 14.359
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 327..361
score: 13.329
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 82..116
score: 8.133
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 362..396
score: 11.104
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 117..147
score: 5.536
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 287..355
e-value: 1.7E-25
score: 91.6
coord: 356..431
e-value: 3.5E-11
score: 44.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 170..286
e-value: 1.0E-32
score: 115.9
coord: 15..169
e-value: 6.0E-20
score: 74.0
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 5..447
NoneNo IPR availablePANTHERPTHR24015:SF538SUBFAMILY NOT NAMEDcoord: 5..447