Lsi04G019690 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G019690
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing family protein
Locationchr04 : 26742295 .. 26743674 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGACCCACATACAAATTTCTCCCTTTCGATTGTCTTCACTTCTTCGTCTCCAAAAGGACCCAAAACTCGCTTTTCAACTGTTCCAGAACCCTAATCCAAGCTCTTCACAACCCCCAAAAGCCTTCCGTTACTCTTTACTTTCCTACGATCTCATCATCTCCAAGCTTGGACGTGCCAAAATGTTCGATGAAATGGAAGAAATCCTCCACCAGCTCAAGCAAGAGACTCGTTTTTCTCCTCACGAGGTCATTTTCTGTAATGTCATTTCGTTTTATGGCCGAGCCCGCCTCCCTGACCGTGCCTTCCAAGTGTTCGATAAAATTCCATCATTCCGTTGCAAGCGGACGGTGAAATCTGCAAATTCTTTGTTGGATGCTTTGTTGAAGTGTCGGGAGTTTGAGAAAATGGCGGAAGTTTTTGTGGGCATTGGTAACTATGGCTCCCCTGATGCTTGTACTTTTAACATTTTGATTCATGCTGCTTGTTTATGTGGGGATTTGGATGCTGCATGGGATGTGTTCGATGAAATGCAAAAGAGAGGTGTAAACCCGAATGTGGTTACTTTTGGGACGATGATTTATGGGCTTTCTCTGAATTCGAAGTTGAGAGAAGCATTGAGATTGAAAGAGGATATGGTGAGAGTGTACATGATTTCACCTAATGCGTCAATATATGCTACTTTGATCAAAGGATTATGTGGGGTTGGAGAATTGAATTTGGCTTTCAAGCTAAAGGAGGAGATGGTGACTAACAAGGTAAAATTGGACTCGGCAATTTATTCTACTTTGATCAGTGCGCTCTTCAAACATGGTAGGAAAGAAGAAGTTTCTGACATTTTAGGAGAAATGGGAGACAATGGGTGCAAACCCGATACCGTTACCTACAATGCCATGATCAATGGGCACTGTAAAGAAAATGATCTTGAATCTGCACATCGAGTGTTGGATGAGATGCTGGAGAAAGGGTGTAAGCCAGATGTGATCAGTTTCAATACAATCATTAGAGGGTTATGCAAGGATGGGAAATGGGATAAAGCAATGGACTTGCTTGAAGATATGCCGAGACGAGGTTGCCCTCCTGATGTGGTATCATACAGAACACTTTTTGATGGGCTGTGTGAAATGATGCAGTTAAAGGAAGCAACTTCCATACTGGATGAGATGATCTTCAAGGGTTATATGCCTCGTTCTGAAAGCTTAAACAAACTCGTCGACAGATTGTGCCAGGAATGCAATATGGAGCTGTTGTGGATGGTTTTAAACAGTCTAGGAAGAGGAAATGGCATGACTGTGGATACATGGGCTAGAGTTGTTGCTTTTGTTTGCAAGGAGAAGCTATCAGAAGCTTCCAACTTAATTAACTCATTGGTTAGTTAA

mRNA sequence

ATGAAGACCCACATACAAATTTCTCCCTTTCGATTGTCTTCACTTCTTCGTCTCCAAAAGGACCCAAAACTCGCTTTTCAACTGTTCCAGAACCCTAATCCAAGCTCTTCACAACCCCCAAAAGCCTTCCGTTACTCTTTACTTTCCTACGATCTCATCATCTCCAAGCTTGGACGTGCCAAAATGTTCGATGAAATGGAAGAAATCCTCCACCAGCTCAAGCAAGAGACTCGTTTTTCTCCTCACGAGGTCATTTTCTGTAATGTCATTTCGTTTTATGGCCGAGCCCGCCTCCCTGACCGTGCCTTCCAAGTGTTCGATAAAATTCCATCATTCCGTTGCAAGCGGACGGTGAAATCTGCAAATTCTTTGTTGGATGCTTTGTTGAAGTGTCGGGAGTTTGAGAAAATGGCGGAAGTTTTTGTGGGCATTGGTAACTATGGCTCCCCTGATGCTTGTACTTTTAACATTTTGATTCATGCTGCTTGTTTATGTGGGGATTTGGATGCTGCATGGGATGTGTTCGATGAAATGCAAAAGAGAGGTGTAAACCCGAATGTGGTTACTTTTGGGACGATGATTTATGGGCTTTCTCTGAATTCGAAGTTGAGAGAAGCATTGAGATTGAAAGAGGATATGGTGAGAGTGTACATGATTTCACCTAATGCGTCAATATATGCTACTTTGATCAAAGGATTATGTGGGGTTGGAGAATTGAATTTGGCTTTCAAGCTAAAGGAGGAGATGGTGACTAACAAGGTAAAATTGGACTCGGCAATTTATTCTACTTTGATCAGTGCGCTCTTCAAACATGGTAGGAAAGAAGAAGTTTCTGACATTTTAGGAGAAATGGGAGACAATGGGTGCAAACCCGATACCGTTACCTACAATGCCATGATCAATGGGCACTGTAAAGAAAATGATCTTGAATCTGCACATCGAGTGTTGGATGAGATGCTGGAGAAAGGGTGTAAGCCAGATGTGATCAGTTTCAATACAATCATTAGAGGGTTATGCAAGGATGGGAAATGGGATAAAGCAATGGACTTGCTTGAAGATATGCCGAGACGAGGTTGCCCTCCTGATGTGGTATCATACAGAACACTTTTTGATGGGCTGTGTGAAATGATGCAGTTAAAGGAAGCAACTTCCATACTGGATGAGATGATCTTCAAGGGTTATATGCCTCGTTCTGAAAGCTTAAACAAACTCGTCGACAGATTGTGCCAGGAATGCAATATGGAGCTGTTGTGGATGGTTTTAAACAGTCTAGGAAGAGGAAATGGCATGACTGTGGATACATGGGCTAGAGTTGTTGCTTTTGTTTGCAAGGAGAAGCTATCAGAAGCTTCCAACTTAATTAACTCATTGGTTAGTTAA

Coding sequence (CDS)

ATGAAGACCCACATACAAATTTCTCCCTTTCGATTGTCTTCACTTCTTCGTCTCCAAAAGGACCCAAAACTCGCTTTTCAACTGTTCCAGAACCCTAATCCAAGCTCTTCACAACCCCCAAAAGCCTTCCGTTACTCTTTACTTTCCTACGATCTCATCATCTCCAAGCTTGGACGTGCCAAAATGTTCGATGAAATGGAAGAAATCCTCCACCAGCTCAAGCAAGAGACTCGTTTTTCTCCTCACGAGGTCATTTTCTGTAATGTCATTTCGTTTTATGGCCGAGCCCGCCTCCCTGACCGTGCCTTCCAAGTGTTCGATAAAATTCCATCATTCCGTTGCAAGCGGACGGTGAAATCTGCAAATTCTTTGTTGGATGCTTTGTTGAAGTGTCGGGAGTTTGAGAAAATGGCGGAAGTTTTTGTGGGCATTGGTAACTATGGCTCCCCTGATGCTTGTACTTTTAACATTTTGATTCATGCTGCTTGTTTATGTGGGGATTTGGATGCTGCATGGGATGTGTTCGATGAAATGCAAAAGAGAGGTGTAAACCCGAATGTGGTTACTTTTGGGACGATGATTTATGGGCTTTCTCTGAATTCGAAGTTGAGAGAAGCATTGAGATTGAAAGAGGATATGGTGAGAGTGTACATGATTTCACCTAATGCGTCAATATATGCTACTTTGATCAAAGGATTATGTGGGGTTGGAGAATTGAATTTGGCTTTCAAGCTAAAGGAGGAGATGGTGACTAACAAGGTAAAATTGGACTCGGCAATTTATTCTACTTTGATCAGTGCGCTCTTCAAACATGGTAGGAAAGAAGAAGTTTCTGACATTTTAGGAGAAATGGGAGACAATGGGTGCAAACCCGATACCGTTACCTACAATGCCATGATCAATGGGCACTGTAAAGAAAATGATCTTGAATCTGCACATCGAGTGTTGGATGAGATGCTGGAGAAAGGGTGTAAGCCAGATGTGATCAGTTTCAATACAATCATTAGAGGGTTATGCAAGGATGGGAAATGGGATAAAGCAATGGACTTGCTTGAAGATATGCCGAGACGAGGTTGCCCTCCTGATGTGGTATCATACAGAACACTTTTTGATGGGCTGTGTGAAATGATGCAGTTAAAGGAAGCAACTTCCATACTGGATGAGATGATCTTCAAGGGTTATATGCCTCGTTCTGAAAGCTTAAACAAACTCGTCGACAGATTGTGCCAGGAATGCAATATGGAGCTGTTGTGGATGGTTTTAAACAGTCTAGGAAGAGGAAATGGCATGACTGTGGATACATGGGCTAGAGTTGTTGCTTTTGTTTGCAAGGAGAAGCTATCAGAAGCTTCCAACTTAATTAACTCATTGGTTAGTTAA

Protein sequence

MKTHIQISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRAKMFDEMEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVKSANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQKRGVNPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELNLAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMINGHCKENDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCPPDVVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWMVLNSLGRGNGMTVDTWARVVAFVCKEKLSEASNLINSLVS
Homology
[Close]
BLAST of Lsi04G019690 vs. Swiss-Prot
Match: PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 1.5e-146
Identity = 251/453 (55.41%), Postives = 331/453 (73.07%), Query Frame = 1 

Query: 7   ISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRAKMFDEM 66
           +S FRL+SLLR + DP  A +LF+NP+P S+ P + FRYSLL YD+II+KLG +KMFDE+
Sbjct: 7   VSSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDEL 66

Query: 67  EEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVKSANSLLD 126
           +++L  LK +TR  P E+IFCNVI+F+GR +LP RA  +FD++P +RC+RTVKS NSLL 
Sbjct: 67  DQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLS 126

Query: 127 ALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQKRGVNPN 186
           ALLKC E EKM E    I  +G PDACT+NILIH     G  D A  +FDEM K+ V P 
Sbjct: 127 ALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPT 186

Query: 187 VVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELNLAFKLK 246
            VTFGT+I+GL  +S+++EAL++K DM++VY + P   IYA+LIK LC +GEL+ AFKLK
Sbjct: 187 GVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLK 246

Query: 247 EEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMINGHCKE 306
           +E    K+K+D+AIYSTLIS+L K GR  EVS IL EM + GCKPDTVTYN +ING C E
Sbjct: 247 DEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVE 306

Query: 307 NDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCPPDVVSY 366
           ND ESA+RVLDEM+EKG KPDVIS+N I+    +  KW++A  L EDMPRRGC PD +SY
Sbjct: 307 NDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366

Query: 367 RTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWMVLNSLGR 426
           R +FDGLCE +Q +EA  ILDEM+FKGY PR + L   + +LC+   +E+L  V++SL R
Sbjct: 367 RIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR 426

Query: 427 GNGMTVDTWARVVAFVCKEK-LSEASNLINSLV 459
           G     D W+ ++  +CKE  +S++ +L+ + V
Sbjct: 427 GIAGDADVWSVMIPTMCKEPVISDSIDLLLNTV 459

[Close]
BLAST of Lsi04G019690 vs. Swiss-Prot
Match: PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.3e-56
Identity = 140/453 (30.91%), Postives = 244/453 (53.86%), Query Frame = 1 

Query: 14  SLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRAKMFDEMEEILHQL 73
           SL++ ++DP+    +F   N +S Q  K F ++  +Y +++  L R K F  ++ ILHQ+
Sbjct: 61  SLMKRERDPQGVLDIF---NKASQQ--KGFNHNNATYSVLLDNLVRHKKFLAVDAILHQM 120

Query: 74  KQET-RFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSF-RCKRTVKSANSLLDALLKC 133
           K ET RF   E +F N++  + R+ L D+  ++F+ I    R K ++ + ++ L+ L+  
Sbjct: 121 KYETCRFQ--ESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDS 180

Query: 134 REFEKMAEVFV-GIGNYG-SPDACTFNILIHAACLCGDLDAAWDVFDEMQKRGVN-PNVV 193
            E     ++ +    N G  P+ C FNIL+   C  GD++ A+ V +EM++ G++ PN +
Sbjct: 181 GEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSI 240

Query: 194 TFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELNLAFKLKEE 253
           T+ T++  L  +S+ +EA+ L EDM+    ISP+   +  +I G C  GE+  A K+ + 
Sbjct: 241 TYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDF 300

Query: 254 MVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMINGHCKEND 313
           M  N    +   YS L++   K G+ +E      E+   G K DTV Y  ++N  C+  +
Sbjct: 301 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 360

Query: 314 LESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCPPDVVSYRT 373
            + A ++L EM    C+ D +++N I+RGL  +G+ ++A+ +L+     G   +  SYR 
Sbjct: 361 TDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRI 420

Query: 374 LFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMEL-LWMVLNSLGRG 433
           + + LC   +L++A   L  M  +G  P   + N+LV RLC+    E+ + +++  L  G
Sbjct: 421 ILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIG 480

Query: 434 NGMTVDTWARVVAFVCKE-KLSEASNLINSLVS 460
                 +W  VV  +CKE KL     L++SLVS
Sbjct: 481 LIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506

[Close]
BLAST of Lsi04G019690 vs. Swiss-Prot
Match: PPR20_ARATH (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.2e-52
Identity = 137/391 (35.04%), Postives = 200/391 (51.15%), Query Frame = 1 

Query: 20  KDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRAKMFDEMEEILHQLKQETRF 79
           +DP+ A  LF             FR+   SY  +I KL +++ FD +++IL +L +    
Sbjct: 60  EDPEEALSLFHQ------YQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQIL-RLVRYRNV 119

Query: 80  SPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVKSANSLLDALLKCREFEKMAE 139
              E +F  +I  YG+A   D+A  VF KI SF C RT++S N+L++ L+   E EK   
Sbjct: 120 RCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKS 179

Query: 140 VFVGIGNYG-SPDACTFNILIHAACLCGDLDAAWDVFDEMQKRGVNPNVVTFGTMIYGLS 199
            F G  +    P++ +FNILI       D +AA  VFDEM +  V P+VVT+ ++I  L 
Sbjct: 180 FFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLC 239

Query: 200 LNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELNLAFKLKEEMVTNKVKLDS 259
            N  + +A  L EDM++   I PNA  +  L+KGLC  GE N A KL  +M     K   
Sbjct: 240 RNDDMGKAKSLLEDMIK-KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL 299

Query: 260 AIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMINGHCKENDLESAHRVLDE 319
             Y  L+S L K GR +E   +LGEM     KPD V YN ++N  C E  +  A+RVL E
Sbjct: 300 VNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTE 359

Query: 320 MLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCPPDVVSYRTLFDGLCEMMQ 379
           M  KGCKP+  ++  +I G C+   +D  +++L  M      P   ++  +  GL +   
Sbjct: 360 MQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGN 419

Query: 380 LKEATSILDEMIFKGYMPRSESLNKLVDRLC 410
           L  A  +L+ M  K     S +   L+  LC
Sbjct: 420 LDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442

[Close]
BLAST of Lsi04G019690 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.8e-52
Identity = 113/383 (29.50%), Postives = 198/383 (51.70%), Query Frame = 1 

Query: 43  FRYSLLSYDLIISKLGRAKMFDEMEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRA 102
           F   +LSY+ ++    R+K      E + +   E++ SP+   +  +I  +  A   D A
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224

Query: 103 FQVFDKIPSFRCKRTVKSANSLLDALLKCREFEKMAEVFVGIGNYG-SPDACTFNILIHA 162
             +FDK+ +  C   V + N+L+D   K R+ +   ++   +   G  P+  ++N++I+ 
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284

Query: 163 ACLCGDLDAAWDVFDEMQKRGVNPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISP 222
            C  G +     V  EM +RG + + VT+ T+I G        +AL +  +M+R + ++P
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLTP 344

Query: 223 NASIYATLIKGLCGVGELNLAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDIL 282
           +   Y +LI  +C  G +N A +  ++M    +  +   Y+TL+    + G   E   +L
Sbjct: 345 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 404

Query: 283 GEMGDNGCKPDTVTYNAMINGHCKENDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKD 342
            EM DNG  P  VTYNA+INGHC    +E A  VL++M EKG  PDV+S++T++ G C+ 
Sbjct: 405 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 464

Query: 343 GKWDKAMDLLEDMPRRGCPPDVVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESL 402
              D+A+ +  +M  +G  PD ++Y +L  G CE  + KEA  + +EM+  G  P   + 
Sbjct: 465 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 524

Query: 403 NKLVDRLCQECNMELLWMVLNSL 425
             L++  C E ++E    + N +
Sbjct: 525 TALINAYCMEGDLEKALQLHNEM 546

[Close]
BLAST of Lsi04G019690 vs. Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.3e-49
Identity = 131/459 (28.54%), Postives = 235/459 (51.20%), Query Frame = 1 

Query: 6   QISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRAKMFDE 65
           +I+PF+L  LL L  +   + +LF     S +     +R+S   Y ++I KLG    F  
Sbjct: 75  KITPFQLYKLLELPLNVSTSMELF-----SWTGSQNGYRHSFDVYQVLIGKLGANGEFKT 134

Query: 66  MEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPS-FRCKRTVKSANSL 125
           ++ +L Q+K E      E +F +++  Y +A  P +  ++  ++ + + C+ T KS N +
Sbjct: 135 IDRLLIQMKDEGIVFK-ESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVV 194

Query: 126 LDALLKCREFEKMAEVFVG-IGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQKRGV 185
           L+ L+     +  A VF   +     P   TF +++ A C   ++D+A  +  +M K G 
Sbjct: 195 LEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGC 254

Query: 186 NPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELNLAF 245
            PN V + T+I+ LS  +++ EAL+L E+M  +  + P+A  +  +I GLC    +N A 
Sbjct: 255 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV-PDAETFNDVILGLCKFDRINEAA 314

Query: 246 KLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMINGH 305
           K+   M+      D   Y  L++ L K GR +   D+   +     KP+ V +N +I+G 
Sbjct: 315 KMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGF 374

Query: 306 CKENDLESAHRVLDEMLEK-GCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCPPD 365
                L+ A  VL +M+   G  PDV ++N++I G  K+G    A+++L DM  +GC P+
Sbjct: 375 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 434

Query: 366 VVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWMVLN 425
           V SY  L DG C++ ++ EA ++L+EM   G  P +   N L+   C+E  +     +  
Sbjct: 435 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 494

Query: 426 SLGR-GNGMTVDTWARVVAFVCK-EKLSEASNLINSLVS 460
            + R G    V T+  +++ +C+ +++  A  L+  ++S
Sbjct: 495 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522

[Close]
BLAST of Lsi04G019690 vs. TrEMBL
Match: A0A0A0KZF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622790 PE=4 SV=1)

HSP 1 Score: 737.3 bits (1902), Expect = 1.2e-209
Identity = 368/459 (80.17%), Postives = 394/459 (85.84%), Query Frame = 1 

Query: 1   MKTHIQISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRA 60
           MKT   ISPFRLSSLLRLQKDP LA QLF NPNPSSS+PPK FRYSLLSYDLIISKLGRA
Sbjct: 69  MKTQKPISPFRLSSLLRLQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRA 128

Query: 61  KMFDEMEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVKS 120
           KMFDEMEEIL QLKQETRF+PHEVIFCNVI+FYGRA LPDRAFQVF++IPSFRCKRTVKS
Sbjct: 129 KMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKS 188

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQK 180
            NSLL ALLK R+ EKM +VFV I NYGSPDACTFNILIHAACLCGDLDA          
Sbjct: 189 VNSLLAALLKNRQLEKMTQVFVDISNYGSPDACTFNILIHAACLCGDLDA---------- 248

Query: 181 RGVNPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELN 240
                                 L+EALRLKEDMV+VYMI PNASIY TLIKG CGVGELN
Sbjct: 249 ----------------------LKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELN 308

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMI 300
            AFKLKEEMVT+ VKL SA+YSTLISALFKHGRKEEVSDIL EMG+NGCKPDTVTYNA+I
Sbjct: 309 FAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAII 368

Query: 301 NGHCKENDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCP 360
           NGHCKENDLESAHRV+DEM+EKGCKPDV SFNTII  LCK+GK DKAMDLLEDMPRRGCP
Sbjct: 369 NGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCP 428

Query: 361 PDVVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWMV 420
           PDV+SYR +FDGLCEMMQLKEATSILDEMIFKGY+PR+ES+NKLVDRLCQECNMELLWM+
Sbjct: 429 PDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWMI 488

Query: 421 LNSLGRGNGMTVDTWARVVAFVCKEKLSEASNLINSLVS 460
           LNSLGRGN M +D WARVVAFV KE LSE+SNLI+SL+S
Sbjct: 489 LNSLGRGNRMNMDMWARVVAFVYKENLSESSNLIDSLIS 495

[Close]
BLAST of Lsi04G019690 vs. TrEMBL
Match: M5WZC0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022285mg PE=4 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 1.0e-168
Identity = 296/460 (64.35%), Postives = 359/460 (78.04%), Query Frame = 1 

Query: 1   MKTHIQISPFRLSSLLRLQKDPKLAFQLFQNPNPSSS-QPPKAFRYSLLSYDLIISKLGR 60
           M     ISPFRLSSLLR QKDP LA QLFQNPN  S+ Q  + FRYSLLSYDLII+KLGR
Sbjct: 1   MNASKSISPFRLSSLLRRQKDPILALQLFQNPNSDSTPQLKRPFRYSLLSYDLIITKLGR 60

Query: 61  AKMFDEMEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVK 120
           AKMF +M++ILHQLKQ+TRF+P E+IFCNVISFYGRA LPDRA Q+FD+IP+FRC RTVK
Sbjct: 61  AKMFHQMDQILHQLKQDTRFAPPEIIFCNVISFYGRAHLPDRALQMFDEIPTFRCHRTVK 120

Query: 121 SANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQ 180
           S NSLL+ALLKC EFEKM + FVGI  Y +PDACT+NIL+ A C    LD AW V DEM 
Sbjct: 121 SLNSLLNALLKCGEFEKMWKFFVGIDKYATPDACTYNILMKACCSNEYLDDAWKVLDEMS 180

Query: 181 KRGVNPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGEL 240
           ++G+ PN VT  ++IY L  N KL+EA  LKEDM RVY + P   +Y +L+KGLC +GE+
Sbjct: 181 RKGIPPNSVTMASLIYCLCSNLKLKEAFTLKEDMARVYGVPPTIFVYTSLMKGLCKIGEM 240

Query: 241 NLAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAM 300
           +LAF+LKEEM+  K+K D+A+YSTLIS LFK GRK EV  +L EM + GCK +TVTYNAM
Sbjct: 241 SLAFRLKEEMIMRKIKPDAAVYSTLISGLFKLGRKGEVFGLLEEMSEYGCKLNTVTYNAM 300

Query: 301 INGHCKENDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGC 360
           ING CKE D E+A++VLDEM+EKGC+PDVIS+N I+ GLCK+GKW +A DL ED+PRRGC
Sbjct: 301 INGFCKEKDFEAAYKVLDEMVEKGCEPDVISYNVILGGLCKEGKWSEANDLFEDLPRRGC 360

Query: 361 PPDVVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWM 420
            PDVVSYR +F GLC+  Q +EA  ILDE+IFKGY P   S +KLV+ LC+E +MELL  
Sbjct: 361 TPDVVSYRIMFTGLCDCRQFREAAFILDELIFKGYAPHCLSAHKLVEGLCREGDMELLRT 420

Query: 421 VLNSLGRGNGMTVDTWARVVAFVC-KEKLSEASNLINSLV 459
           VL SLG GN + VDTWA V++ VC KEKLS  S L+++L+
Sbjct: 421 VLTSLGNGNVLHVDTWAMVISMVCKKEKLSNVSELVDTLL 460

[Close]
BLAST of Lsi04G019690 vs. TrEMBL
Match: A0A061F7L0_THECC (Pentatricopeptide repeat (PPR) superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_031884 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 5.5e-159
Identity = 277/459 (60.35%), Postives = 351/459 (76.47%), Query Frame = 1 

Query: 1   MKTHIQISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRA 60
           MKT   ISPFRLSSLLR +KDP LAF LF+NPNP      K FRYS LSYDLII+KLGRA
Sbjct: 1   MKTPKSISPFRLSSLLRSEKDPTLAFNLFKNPNPDPKPAGKPFRYSPLSYDLIITKLGRA 60

Query: 61  KMFDEMEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVKS 120
           +MFDEME++LHQ K +TR  P E+IFCN + FYGRA L +RA Q+F+++P++RC+RTVKS
Sbjct: 61  RMFDEMEQVLHQHKNDTRLVPQEIIFCNAMKFYGRACLHERALQLFEEMPAYRCQRTVKS 120

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQK 180
            NSLL+ALL   +F++M +VF G+  Y  PDACT+NILI A CL G LD A ++FDEMQ+
Sbjct: 121 VNSLLNALLLSEKFDEMKQVFFGMEKYARPDACTYNILIRACCLSGCLDDASNLFDEMQR 180

Query: 181 RGVNPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELN 240
           +GV PNVVTFGT+I GL +  K+ EA +LK DMVR++ + PN   Y+ +IKGLC +GEL+
Sbjct: 181 KGVKPNVVTFGTLIRGLCMEMKVNEAFKLKADMVRLHGLCPNPCTYSMMIKGLCRIGELS 240

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMI 300
           LA +LKEEMV NK+K+DS+IYSTLIS  F  GR++E   I  EM  N CKPDTVTYN  I
Sbjct: 241 LAIRLKEEMVGNKIKVDSSIYSTLISGHFNIGRQDEALGIFEEMALNECKPDTVTYNETI 300

Query: 301 NGHCKENDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCP 360
           NG CK  D E+A+RVL++M +K CKPDVIS+N +I GLCK+GKW +A DL EDMPR+GC 
Sbjct: 301 NGFCKVKDFEAAYRVLEDMAKKQCKPDVISYNILIDGLCKEGKWSEANDLFEDMPRQGCK 360

Query: 361 PDVVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWMV 420
           PDVVSYR LFDGLC  +Q KEA  ILDEMIFKGY+P   S++K V  LCQ+ + +LL MV
Sbjct: 361 PDVVSYRLLFDGLCGGLQFKEAAFILDEMIFKGYVPHCASIHKFVSGLCQKADKKLLLMV 420

Query: 421 LNSLGRGNGMTVDTWARVVAFVCKE-KLSEASNLINSLV 459
           LNSL +GN +  DTW  V++ V +E KLS +S+++++L+
Sbjct: 421 LNSLAKGNAIDQDTWLMVISKVYQEDKLSISSDILDALM 459

[Close]
BLAST of Lsi04G019690 vs. TrEMBL
Match: A0A061F8G6_THECC (Pentatricopeptide repeat (PPR) superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_031884 PE=4 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 7.2e-159
Identity = 277/459 (60.35%), Postives = 351/459 (76.47%), Query Frame = 1 

Query: 1   MKTHIQISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRA 60
           MKT   ISPFRLSSLLR +KDP LAF LF+NPNP      K FRYS LSYDLII+KLGRA
Sbjct: 1   MKTPKPISPFRLSSLLRSEKDPTLAFNLFKNPNPDPKPAGKPFRYSPLSYDLIITKLGRA 60

Query: 61  KMFDEMEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVKS 120
           +MFDEME++LHQ K +TR  P E+IFCN + FYGRA L +RA Q+F+++P++RC+RTVKS
Sbjct: 61  RMFDEMEQVLHQHKNDTRLVPQEIIFCNAMKFYGRACLHERALQLFEEMPAYRCQRTVKS 120

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQK 180
            NSLL+ALL   +F++M +VF G+  Y  PDACT+NILI A CL G LD A ++FDEMQ+
Sbjct: 121 VNSLLNALLLSEKFDEMKQVFFGMEKYARPDACTYNILIRACCLSGCLDDASNLFDEMQR 180

Query: 181 RGVNPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELN 240
           +GV PNVVTFGT+I GL +  K+ EA +LK DMVR++ + PN   Y+ +IKGLC +GEL+
Sbjct: 181 KGVKPNVVTFGTLIRGLCMEMKVNEAFKLKADMVRLHGLCPNPCTYSMMIKGLCRIGELS 240

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMI 300
           LA +LKEEMV NK+K+DS+IYSTLIS  F  GR++E   I  EM  N CKPDTVTYN  I
Sbjct: 241 LAIRLKEEMVGNKIKVDSSIYSTLISGHFNIGRQDEALGIFEEMALNECKPDTVTYNETI 300

Query: 301 NGHCKENDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCP 360
           NG CK  D E+A+RVL++M +K CKPDVIS+N +I GLCK+GKW +A DL EDMPR+GC 
Sbjct: 301 NGFCKVKDFEAAYRVLEDMAKKQCKPDVISYNILIDGLCKEGKWSEANDLFEDMPRQGCK 360

Query: 361 PDVVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWMV 420
           PDVVSYR LFDGLC  +Q KEA  ILDEMIFKGY+P   S++K V  LCQ+ + +LL MV
Sbjct: 361 PDVVSYRLLFDGLCGGLQFKEAAFILDEMIFKGYVPHCASIHKFVSGLCQKADKKLLLMV 420

Query: 421 LNSLGRGNGMTVDTWARVVAFVCKE-KLSEASNLINSLV 459
           LNSL +GN +  DTW  V++ V +E KLS +S+++++L+
Sbjct: 421 LNSLAKGNAIDQDTWLMVISKVYQEDKLSISSDILDALM 459

[Close]
BLAST of Lsi04G019690 vs. TrEMBL
Match: A5C1U5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037241 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 1.0e-157
Identity = 275/403 (68.24%), Postives = 325/403 (80.65%), Query Frame = 1 

Query: 7   ISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRAKMFDEM 66
           ISPFRLSSLLRLQ  PKLA QLFQNPNP     PK FRY+ LSYDLII+KLGR++MF EM
Sbjct: 7   ISPFRLSSLLRLQNGPKLALQLFQNPNPD----PKPFRYTHLSYDLIITKLGRSRMFHEM 66

Query: 67  EEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVKSANSLLD 126
           E+IL QL++ETRFSP E+IFCNVISFYGRARLPDRA Q F+ IP FRC+RTVKS NSLL+
Sbjct: 67  EQILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSLLN 126

Query: 127 ALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQKRGVNPN 186
           ALL C+EFEK   +  GI  + +P+ CT+NILI+A CL G L  AW+VFDEM ++ V PN
Sbjct: 127 ALLNCKEFEKFDGILSGIDKFATPNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCPN 186

Query: 187 VVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELNLAFKLK 246
           VVTFGT+I GL  +S+L EA RLKEDMV+V+ + PNA +YA+L+KGLC V EL+LAF+LK
Sbjct: 187 VVTFGTLISGLCRDSRLDEASRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELK 246

Query: 247 EEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMINGHCKE 306
           +EMV NK++LDS IYSTLI+ALFK GRK+EV  +L EM +NGCKPDTVTYNAMI+G C E
Sbjct: 247 KEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNE 306

Query: 307 NDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCPPDVVSY 366
            D E+A+ VL+EM+ KGCKPDVIS+N II GLCK+GKW +A DL EDMPRRGC PDV SY
Sbjct: 307 KDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSY 366

Query: 367 RTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLC 410
           R LFDGLCE MQ  EA  ILDEM+FKGY P+S S  K V+ LC
Sbjct: 367 RILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEALC 405

[Close]
BLAST of Lsi04G019690 vs. TAIR10
Match: AT1G53330.1 (AT1G53330.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 520.8 bits (1340), Expect = 8.7e-148
Identity = 251/453 (55.41%), Postives = 331/453 (73.07%), Query Frame = 1 

Query: 7   ISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRAKMFDEM 66
           +S FRL+SLLR + DP  A +LF+NP+P S+ P + FRYSLL YD+II+KLG +KMFDE+
Sbjct: 7   VSSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDEL 66

Query: 67  EEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVKSANSLLD 126
           +++L  LK +TR  P E+IFCNVI+F+GR +LP RA  +FD++P +RC+RTVKS NSLL 
Sbjct: 67  DQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLS 126

Query: 127 ALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQKRGVNPN 186
           ALLKC E EKM E    I  +G PDACT+NILIH     G  D A  +FDEM K+ V P 
Sbjct: 127 ALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPT 186

Query: 187 VVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELNLAFKLK 246
            VTFGT+I+GL  +S+++EAL++K DM++VY + P   IYA+LIK LC +GEL+ AFKLK
Sbjct: 187 GVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLK 246

Query: 247 EEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMINGHCKE 306
           +E    K+K+D+AIYSTLIS+L K GR  EVS IL EM + GCKPDTVTYN +ING C E
Sbjct: 247 DEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVE 306

Query: 307 NDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCPPDVVSY 366
           ND ESA+RVLDEM+EKG KPDVIS+N I+    +  KW++A  L EDMPRRGC PD +SY
Sbjct: 307 NDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366

Query: 367 RTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWMVLNSLGR 426
           R +FDGLCE +Q +EA  ILDEM+FKGY PR + L   + +LC+   +E+L  V++SL R
Sbjct: 367 RIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR 426

Query: 427 GNGMTVDTWARVVAFVCKEK-LSEASNLINSLV 459
           G     D W+ ++  +CKE  +S++ +L+ + V
Sbjct: 427 GIAGDADVWSVMIPTMCKEPVISDSIDLLLNTV 459

[Close]
BLAST of Lsi04G019690 vs. TAIR10
Match: AT5G18475.1 (AT5G18475.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 219.5 bits (558), Expect = 4.1e-57
Identity = 140/453 (30.91%), Postives = 244/453 (53.86%), Query Frame = 1 

Query: 14  SLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRAKMFDEMEEILHQL 73
           SL++ ++DP+    +F   N +S Q  K F ++  +Y +++  L R K F  ++ ILHQ+
Sbjct: 61  SLMKRERDPQGVLDIF---NKASQQ--KGFNHNNATYSVLLDNLVRHKKFLAVDAILHQM 120

Query: 74  KQET-RFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSF-RCKRTVKSANSLLDALLKC 133
           K ET RF   E +F N++  + R+ L D+  ++F+ I    R K ++ + ++ L+ L+  
Sbjct: 121 KYETCRFQ--ESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDS 180

Query: 134 REFEKMAEVFV-GIGNYG-SPDACTFNILIHAACLCGDLDAAWDVFDEMQKRGVN-PNVV 193
            E     ++ +    N G  P+ C FNIL+   C  GD++ A+ V +EM++ G++ PN +
Sbjct: 181 GEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSI 240

Query: 194 TFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELNLAFKLKEE 253
           T+ T++  L  +S+ +EA+ L EDM+    ISP+   +  +I G C  GE+  A K+ + 
Sbjct: 241 TYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDF 300

Query: 254 MVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMINGHCKEND 313
           M  N    +   YS L++   K G+ +E      E+   G K DTV Y  ++N  C+  +
Sbjct: 301 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 360

Query: 314 LESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCPPDVVSYRT 373
            + A ++L EM    C+ D +++N I+RGL  +G+ ++A+ +L+     G   +  SYR 
Sbjct: 361 TDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRI 420

Query: 374 LFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMEL-LWMVLNSLGRG 433
           + + LC   +L++A   L  M  +G  P   + N+LV RLC+    E+ + +++  L  G
Sbjct: 421 ILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIG 480

Query: 434 NGMTVDTWARVVAFVCKE-KLSEASNLINSLVS 460
                 +W  VV  +CKE KL     L++SLVS
Sbjct: 481 LIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506

[Close]
BLAST of Lsi04G019690 vs. TAIR10
Match: AT1G07740.1 (AT1G07740.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-53
Identity = 137/391 (35.04%), Postives = 200/391 (51.15%), Query Frame = 1 

Query: 20  KDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRAKMFDEMEEILHQLKQETRF 79
           +DP+ A  LF             FR+   SY  +I KL +++ FD +++IL +L +    
Sbjct: 60  EDPEEALSLFHQ------YQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQIL-RLVRYRNV 119

Query: 80  SPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVKSANSLLDALLKCREFEKMAE 139
              E +F  +I  YG+A   D+A  VF KI SF C RT++S N+L++ L+   E EK   
Sbjct: 120 RCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKS 179

Query: 140 VFVGIGNYG-SPDACTFNILIHAACLCGDLDAAWDVFDEMQKRGVNPNVVTFGTMIYGLS 199
            F G  +    P++ +FNILI       D +AA  VFDEM +  V P+VVT+ ++I  L 
Sbjct: 180 FFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLC 239

Query: 200 LNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELNLAFKLKEEMVTNKVKLDS 259
            N  + +A  L EDM++   I PNA  +  L+KGLC  GE N A KL  +M     K   
Sbjct: 240 RNDDMGKAKSLLEDMIK-KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL 299

Query: 260 AIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMINGHCKENDLESAHRVLDE 319
             Y  L+S L K GR +E   +LGEM     KPD V YN ++N  C E  +  A+RVL E
Sbjct: 300 VNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTE 359

Query: 320 MLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCPPDVVSYRTLFDGLCEMMQ 379
           M  KGCKP+  ++  +I G C+   +D  +++L  M      P   ++  +  GL +   
Sbjct: 360 MQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGN 419

Query: 380 LKEATSILDEMIFKGYMPRSESLNKLVDRLC 410
           L  A  +L+ M  K     S +   L+  LC
Sbjct: 420 LDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442

[Close]
BLAST of Lsi04G019690 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-53
Identity = 113/383 (29.50%), Postives = 198/383 (51.70%), Query Frame = 1 

Query: 43  FRYSLLSYDLIISKLGRAKMFDEMEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRA 102
           F   +LSY+ ++    R+K      E + +   E++ SP+   +  +I  +  A   D A
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224

Query: 103 FQVFDKIPSFRCKRTVKSANSLLDALLKCREFEKMAEVFVGIGNYG-SPDACTFNILIHA 162
             +FDK+ +  C   V + N+L+D   K R+ +   ++   +   G  P+  ++N++I+ 
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284

Query: 163 ACLCGDLDAAWDVFDEMQKRGVNPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISP 222
            C  G +     V  EM +RG + + VT+ T+I G        +AL +  +M+R + ++P
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLTP 344

Query: 223 NASIYATLIKGLCGVGELNLAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDIL 282
           +   Y +LI  +C  G +N A +  ++M    +  +   Y+TL+    + G   E   +L
Sbjct: 345 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 404

Query: 283 GEMGDNGCKPDTVTYNAMINGHCKENDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKD 342
            EM DNG  P  VTYNA+INGHC    +E A  VL++M EKG  PDV+S++T++ G C+ 
Sbjct: 405 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 464

Query: 343 GKWDKAMDLLEDMPRRGCPPDVVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESL 402
              D+A+ +  +M  +G  PD ++Y +L  G CE  + KEA  + +EM+  G  P   + 
Sbjct: 465 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 524

Query: 403 NKLVDRLCQECNMELLWMVLNSL 425
             L++  C E ++E    + N +
Sbjct: 525 TALINAYCMEGDLEKALQLHNEM 546

[Close]
BLAST of Lsi04G019690 vs. TAIR10
Match: AT5G64320.1 (AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-50
Identity = 131/459 (28.54%), Postives = 235/459 (51.20%), Query Frame = 1 

Query: 6   QISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRAKMFDE 65
           +I+PF+L  LL L  +   + +LF     S +     +R+S   Y ++I KLG    F  
Sbjct: 75  KITPFQLYKLLELPLNVSTSMELF-----SWTGSQNGYRHSFDVYQVLIGKLGANGEFKT 134

Query: 66  MEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPS-FRCKRTVKSANSL 125
           ++ +L Q+K E      E +F +++  Y +A  P +  ++  ++ + + C+ T KS N +
Sbjct: 135 IDRLLIQMKDEGIVFK-ESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVV 194

Query: 126 LDALLKCREFEKMAEVFVG-IGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQKRGV 185
           L+ L+     +  A VF   +     P   TF +++ A C   ++D+A  +  +M K G 
Sbjct: 195 LEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGC 254

Query: 186 NPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELNLAF 245
            PN V + T+I+ LS  +++ EAL+L E+M  +  + P+A  +  +I GLC    +N A 
Sbjct: 255 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV-PDAETFNDVILGLCKFDRINEAA 314

Query: 246 KLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMINGH 305
           K+   M+      D   Y  L++ L K GR +   D+   +     KP+ V +N +I+G 
Sbjct: 315 KMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGF 374

Query: 306 CKENDLESAHRVLDEMLEK-GCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCPPD 365
                L+ A  VL +M+   G  PDV ++N++I G  K+G    A+++L DM  +GC P+
Sbjct: 375 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 434

Query: 366 VVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWMVLN 425
           V SY  L DG C++ ++ EA ++L+EM   G  P +   N L+   C+E  +     +  
Sbjct: 435 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 494

Query: 426 SLGR-GNGMTVDTWARVVAFVCK-EKLSEASNLINSLVS 460
            + R G    V T+  +++ +C+ +++  A  L+  ++S
Sbjct: 495 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522

[Close]
BLAST of Lsi04G019690 vs. NCBI nr
Match: gi|659103014|ref|XP_008452430.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Cucumis melo])

HSP 1 Score: 825.5 bits (2131), Expect = 4.7e-236
Identity = 402/459 (87.58%), Postives = 429/459 (93.46%), Query Frame = 1 

Query: 1   MKTHIQISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRA 60
           MKT   ISPFRLSSLLRL+KDPKLA QLF NPNPSSS+PPK FRYSLLSYDLIISKLGRA
Sbjct: 67  MKTQKPISPFRLSSLLRLEKDPKLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRA 126

Query: 61  KMFDEMEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVKS 120
           KMFDEMEEIL QLKQETRF+PHEVIFCNVI+FYGRARLPDRAFQVF++IP+FRCKRTVKS
Sbjct: 127 KMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRARLPDRAFQVFERIPTFRCKRTVKS 186

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQK 180
            NSLLDALLK REF KM EV VGIGN+GSPDACTFNILIHAACLCGDLDA W VFDEM+K
Sbjct: 187 VNSLLDALLKSREFGKMMEVLVGIGNHGSPDACTFNILIHAACLCGDLDAVWGVFDEMRK 246

Query: 181 RGVNPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELN 240
           RGV PNVVTFGT+IYGLSLNSKL+EALRLKEDMVRVYMI PNASIY TLIKG CGVGELN
Sbjct: 247 RGVQPNVVTFGTLIYGLSLNSKLKEALRLKEDMVRVYMIKPNASIYTTLIKGFCGVGELN 306

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMI 300
            AFKLKEEMVT+KVKLDS IYSTLISALFKHGRKEEVSDIL EMG+NGCKPDT TYNAMI
Sbjct: 307 FAFKLKEEMVTSKVKLDSKIYSTLISALFKHGRKEEVSDILREMGENGCKPDTATYNAMI 366

Query: 301 NGHCKENDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCP 360
           NGHCKENDLESA+RV+DEM+EKGCKPDVISFNTII GLCK+GK DKAMDLLEDMPRRGCP
Sbjct: 367 NGHCKENDLESANRVVDEMVEKGCKPDVISFNTIIGGLCKEGKLDKAMDLLEDMPRRGCP 426

Query: 361 PDVVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWMV 420
           PDV+SYR +FDGLCEMMQLKEATSILDEMIFKGY+PR+ES+NKLVDRLCQECNMELLWMV
Sbjct: 427 PDVLSYRIVFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWMV 486

Query: 421 LNSLGRGNGMTVDTWARVVAFVCKEKLSEASNLINSLVS 460
           LNSLGRGN M +DTWARVVAF+ KE L E+SNLI+SL+S
Sbjct: 487 LNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS 525

[Close]
BLAST of Lsi04G019690 vs. NCBI nr
Match: gi|449456681|ref|XP_004146077.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Cucumis sativus])

HSP 1 Score: 813.5 bits (2100), Expect = 1.8e-232
Identity = 396/459 (86.27%), Postives = 423/459 (92.16%), Query Frame = 1 

Query: 1   MKTHIQISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRA 60
           MKT   ISPFRLSSLLRLQKDP LA QLF NPNPSSS+PPK FRYSLLSYDLIISKLGRA
Sbjct: 69  MKTQKPISPFRLSSLLRLQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRA 128

Query: 61  KMFDEMEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVKS 120
           KMFDEMEEIL QLKQETRF+PHEVIFCNVI+FYGRA LPDRAFQVF++IPSFRCKRTVKS
Sbjct: 129 KMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKS 188

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQK 180
            NSLL ALLK R+ EKM +VFV I NYGSPDACTFNILIHAACLCGDLDA W VFDEMQK
Sbjct: 189 VNSLLAALLKNRQLEKMTQVFVDISNYGSPDACTFNILIHAACLCGDLDAVWGVFDEMQK 248

Query: 181 RGVNPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELN 240
           RGV PNVVTFGT+IYGLSLNSKL+EALRLKEDMV+VYMI PNASIY TLIKG CGVGELN
Sbjct: 249 RGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELN 308

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMI 300
            AFKLKEEMVT+ VKL SA+YSTLISALFKHGRKEEVSDIL EMG+NGCKPDTVTYNA+I
Sbjct: 309 FAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAII 368

Query: 301 NGHCKENDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCP 360
           NGHCKENDLESAHRV+DEM+EKGCKPDV SFNTII  LCK+GK DKAMDLLEDMPRRGCP
Sbjct: 369 NGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCP 428

Query: 361 PDVVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWMV 420
           PDV+SYR +FDGLCEMMQLKEATSILDEMIFKGY+PR+ES+NKLVDRLCQECNMELLWM+
Sbjct: 429 PDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWMI 488

Query: 421 LNSLGRGNGMTVDTWARVVAFVCKEKLSEASNLINSLVS 460
           LNSLGRGN M +D WARVVAFV KE LSE+SNLI+SL+S
Sbjct: 489 LNSLGRGNRMNMDMWARVVAFVYKENLSESSNLIDSLIS 527

[Close]
BLAST of Lsi04G019690 vs. NCBI nr
Match: gi|700199862|gb|KGN55020.1| (hypothetical protein Csa_4G622790 [Cucumis sativus])

HSP 1 Score: 737.3 bits (1902), Expect = 1.7e-209
Identity = 368/459 (80.17%), Postives = 394/459 (85.84%), Query Frame = 1 

Query: 1   MKTHIQISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRA 60
           MKT   ISPFRLSSLLRLQKDP LA QLF NPNPSSS+PPK FRYSLLSYDLIISKLGRA
Sbjct: 69  MKTQKPISPFRLSSLLRLQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRA 128

Query: 61  KMFDEMEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVKS 120
           KMFDEMEEIL QLKQETRF+PHEVIFCNVI+FYGRA LPDRAFQVF++IPSFRCKRTVKS
Sbjct: 129 KMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKS 188

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQK 180
            NSLL ALLK R+ EKM +VFV I NYGSPDACTFNILIHAACLCGDLDA          
Sbjct: 189 VNSLLAALLKNRQLEKMTQVFVDISNYGSPDACTFNILIHAACLCGDLDA---------- 248

Query: 181 RGVNPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELN 240
                                 L+EALRLKEDMV+VYMI PNASIY TLIKG CGVGELN
Sbjct: 249 ----------------------LKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELN 308

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMI 300
            AFKLKEEMVT+ VKL SA+YSTLISALFKHGRKEEVSDIL EMG+NGCKPDTVTYNA+I
Sbjct: 309 FAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAII 368

Query: 301 NGHCKENDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCP 360
           NGHCKENDLESAHRV+DEM+EKGCKPDV SFNTII  LCK+GK DKAMDLLEDMPRRGCP
Sbjct: 369 NGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCP 428

Query: 361 PDVVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWMV 420
           PDV+SYR +FDGLCEMMQLKEATSILDEMIFKGY+PR+ES+NKLVDRLCQECNMELLWM+
Sbjct: 429 PDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWMI 488

Query: 421 LNSLGRGNGMTVDTWARVVAFVCKEKLSEASNLINSLVS 460
           LNSLGRGN M +D WARVVAFV KE LSE+SNLI+SL+S
Sbjct: 489 LNSLGRGNRMNMDMWARVVAFVYKENLSESSNLIDSLIS 495

[Close]
BLAST of Lsi04G019690 vs. NCBI nr
Match: gi|1009131812|ref|XP_015883043.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Ziziphus jujuba])

HSP 1 Score: 625.5 bits (1612), Expect = 7.1e-176
Identity = 308/459 (67.10%), Postives = 363/459 (79.08%), Query Frame = 1 

Query: 1   MKTHIQISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPPKAFRYSLLSYDLIISKLGRA 60
           MKT   IS FRLSSLLRLQKDP LA QLFQNPNP   +  K FRYSLL+YDLIISKLGRA
Sbjct: 39  MKTMKPISSFRLSSLLRLQKDPILALQLFQNPNPQHPKRHKPFRYSLLAYDLIISKLGRA 98

Query: 61  KMFDEMEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVKS 120
           KMFD ME IL QLKQETRF+P E+IFCNVI FYGRARLP RA QVFD+IPSFRC+RTVKS
Sbjct: 99  KMFDPMELILQQLKQETRFAPPEIIFCNVICFYGRARLPQRALQVFDEIPSFRCQRTVKS 158

Query: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQK 180
            NSLLDAL KC E +K+ E+F+ I NY  PDACT+NILI A C  G LD AW VFDEM+ 
Sbjct: 159 FNSLLDALCKCSELQKVREIFMDIENYVYPDACTYNILIKACCTNGSLDDAWVVFDEMRS 218

Query: 181 RGVNPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGELN 240
           +G  PNVVTFG +IYGL  + KL+EA  LKEDM RVY + PNA +Y +LIKGLC + +L+
Sbjct: 219 KGFCPNVVTFGNLIYGLCTDLKLKEAFNLKEDMTRVYGVKPNAFVYTSLIKGLCKIDDLS 278

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAMI 300
           LAFKLKEEMV NK+KLDSA+YSTLI ALFK GRK+EVS IL EM  NGC+PDTVTYNAMI
Sbjct: 279 LAFKLKEEMVNNKIKLDSAVYSTLIGALFKVGRKDEVSGILEEMTVNGCEPDTVTYNAMI 338

Query: 301 NGHCKENDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGCP 360
           NG CKE D E+A+ VLDEM++K CKPD+IS+N II GLCK+GKW +  DL ED+PRRGC 
Sbjct: 339 NGFCKEKDFEAAYGVLDEMVKKNCKPDIISYNVIIGGLCKEGKWIEGNDLFEDLPRRGCK 398

Query: 361 PDVVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWMV 420
           PDVVSYRT+FDG C   + KEA  IL+EM+FKGY P S S++KL+D LCQE N+E +  V
Sbjct: 399 PDVVSYRTIFDGFCNWRRFKEAMFILEEMVFKGYSPCSASIHKLLDGLCQEGNVEFISKV 458

Query: 421 LNSLGRGNGMTVDTWARVVAFVC-KEKLSEASNLINSLV 459
           LNS+G  N + + TW  V++ VC K+K S++ NLI++L+
Sbjct: 459 LNSIGNANVVDLGTWGSVISVVCKKDKQSDSINLIDTLL 497

[Close]
BLAST of Lsi04G019690 vs. NCBI nr
Match: gi|657966100|ref|XP_008374732.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Malus domestica])

HSP 1 Score: 612.5 bits (1578), Expect = 6.2e-172
Identity = 301/462 (65.15%), Postives = 361/462 (78.14%), Query Frame = 1 

Query: 1   MKTHIQISPFRLSSLLRLQKDPKLAFQLFQNPNPSSSQPP-KAFRYSLLSYDLIISKLGR 60
           MK    ISPFRL SLLR +K+P LA Q+F+NPNP  + PP K FRYSLLSYDLII+KLGR
Sbjct: 1   MKASKPISPFRLCSLLRREKNPNLALQIFRNPNPDLNPPPGKLFRYSLLSYDLIITKLGR 60

Query: 61  AKMFDEMEEILHQLKQETRFSPHEVIFCNVISFYGRARLPDRAFQVFDKIPSFRCKRTVK 120
           AKMFD+ME++LHQ+KQETRF+P E+IFCNVISFYGRARLPDRA QVFD+IP+FRC+RTVK
Sbjct: 61  AKMFDQMEQMLHQMKQETRFAPPEIIFCNVISFYGRARLPDRALQVFDEIPAFRCQRTVK 120

Query: 121 SANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDAAWDVFDEMQ 180
           S NSLLD L KC EFEKM+ +FVG  NY +PDACT+NILI A C    LD AW VFDEM 
Sbjct: 121 SLNSLLDVLFKCGEFEKMSRLFVGFENYATPDACTYNILIKACCANECLDDAWKVFDEMS 180

Query: 181 KRGVNPNVVTFGTMIYGLSLNSKLREALRLKEDMVRVYMISPNASIYATLIKGLCGVGEL 240
           ++GV P  VTFGT+IY L  N +L+EA +LK DMV ++ + P+  +Y +LIKGLC +GE+
Sbjct: 181 RKGVRPTTVTFGTLIYWLCSNFRLKEAFKLKYDMVVIHGVVPDQYVYTSLIKGLCKIGEM 240

Query: 241 NLAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGDNGCKPDTVTYNAM 300
             AF+LKEEMV  K+K DSA+YSTLIS LF  GRKE VS +L EM + GCKPDTVT+NAM
Sbjct: 241 TSAFELKEEMVMKKIKPDSAVYSTLISGLFNAGRKELVSGLLEEMSEYGCKPDTVTFNAM 300

Query: 301 INGHCKENDLESAHRVLDEMLEKGCKPDVISFNTIIRGLCKDGKWDKAMDLLEDMPRRGC 360
           I+G CKE + E+A+RVLDEM EK C+PDVIS+N II GLCKDGKW +A DLLED+PRRGC
Sbjct: 301 IHGLCKEKNFEAAYRVLDEMTEKDCEPDVISYNVIIGGLCKDGKWREANDLLEDLPRRGC 360

Query: 361 PPDVVSYRTLFDGLCEMMQLKEATSILDEMIFKGYMPRSESLNKLVDRLCQECNMELLWM 420
            PDVVSYRT+FDGLC+  Q  EA+ +LDEMIFKG+ PR  S  KLV+ LC+  N ELL  
Sbjct: 361 TPDVVSYRTMFDGLCDWRQFNEASLVLDEMIFKGFAPRLASTQKLVEGLCEAANAELLGT 420

Query: 421 VLNSLGRGNG--MTVDTWARVVAFVC-KEKLSEASNLINSLV 459
           VL SLG+G G  + VD W  +V  VC KEKLS  S L+++LV
Sbjct: 421 VLTSLGKGKGNFLHVDIWGMLVDMVCKKEKLSNVSELVDNLV 462

The following BLAST results are available for this feature:
BLAST of Lsi04G019690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR79_ARATH1.5e-14655.41Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis th... [more]
PP392_ARATH7.3e-5630.91Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN... [more]
PPR20_ARATH2.2e-5235.04Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidop... [more]
PP407_ARATH3.8e-5229.50Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PP444_ARATH2.3e-4928.54Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
BLAST of Lsi04G019690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZF4_CUCSA1.2e-20980.17Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622790 PE=4 SV=1[more]
M5WZC0_PRUPE1.0e-16864.35Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022285mg PE=4 SV=1[more]
A0A061F7L0_THECC5.5e-15960.35Pentatricopeptide repeat (PPR) superfamily protein, putative isoform 1 OS=Theobr... [more]
A0A061F8G6_THECC7.2e-15960.35Pentatricopeptide repeat (PPR) superfamily protein, putative isoform 2 OS=Theobr... [more]
A5C1U5_VITVI1.0e-15768.24Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037241 PE=4 SV=1[more]
BLAST of Lsi04G019690 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G53330.18.7e-14855.41 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G18475.14.1e-5730.91 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G07740.11.2e-5335.04 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G39710.12.1e-5329.50 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G64320.11.3e-5028.54 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Lsi04G019690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659103014|ref|XP_008452430.1|4.7e-23687.58PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Cucum... [more]
gi|449456681|ref|XP_004146077.1|1.8e-23286.27PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Cucum... [more]
gi|700199862|gb|KGN55020.1|1.7e-20980.17hypothetical protein Csa_4G622790 [Cucumis sativus][more]
gi|1009131812|ref|XP_015883043.1|7.1e-17667.10PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Zizip... [more]
gi|657966100|ref|XP_008374732.1|6.2e-17265.15PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Malus... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010154 fruit development
biological_process GO:0048731 system development
biological_process GO:0009790 embryo development
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G019690.1Lsi04G019690.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 84..113
score: 0.05coord: 49..75
score: 0.49coord: 260..289
score: 4.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 357..389
score: 1.6E-8coord: 218..250
score: 2.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 150..197
score: 9.4E-17coord: 291..340
score: 2.3
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 260..293
score: 2.6E-7coord: 84..117
score: 0.0032coord: 153..187
score: 1.9E-10coord: 294..328
score: 3.5E-13coord: 364..395
score: 5.2E-4coord: 225..257
score: 3.2E-5coord: 329..363
score: 3.0
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 327..361
score: 14.732coord: 257..291
score: 11.586coord: 186..220
score: 7.991coord: 362..396
score: 10.983coord: 151..185
score: 13.263coord: 222..256
score: 9.493coord: 292..326
score: 14.809coord: 46..76
score: 7.509coord: 82..116
score: 7.443coord: 117..147
score: 5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 8..415
score: 8.3E