Carg14028 (gene) Silver-seed gourd

Overview
NameCarg14028
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPolypyrimidine tract-binding-like protein, putative
LocationCucurbita_argyrosperma_scaffold_097 : 435181 .. 438387 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAGCTCGCTTCCGCTAGGGATTTCAGTGCGTATGGCTCTCGGGCGGCCCGGAGCCGGGCGGAGTACATAAACGCCGGCCTCTACTTGTTCGCCACTATCCTTCTTCTCGGCGGATTTGTGGCTCAGCTTTCGCGCGAGGCCAAATCCGGTTTGGCCCTAATTGTGCTCGCGGCTGCGCTAATTTTGATTGTTAATGTGCACGATCTCTTCGCGCATCTCGCCGGAATCGATTACCGGTTGCCGCTGCTGGCCCAGTACGACGTCCAGCTTCTGTTTGTGGAATTTGCTGTTCCATTTCTTCAGGCGATTGGATCGTTGCTCTTGTTGTTGGGTACTCTGTTTCTTCTAATTCAGGTGCGGATTAATAATTTGATTCCGTTGATTCATTCTGTAATGTGTCATACTCTGATCAAGATTTCGAAGTGATTTCGAAGTGTGAAGACTATCCTTACAAACCATGATACAACACGACCATGTTAGGTGCGAAGATTGTCCTTGCAAATTAACATGATTCTTTTAACCTATTTTGATGTTTTTTTAGGGAAAAGTATGCTATGATTGAGCTACCGAAAAGAGAAGTTGTTCTTTGTTGATATAAGTGGTAACTTTCCGTTCTTTTAAGTATTTCTTAACGGTTACTTAGTCAAGATCCTCAAAATTACTCTAGTTCGGATGTAGTCTACCCCTTCTTTACTCGGGGTCACATTCAGTTTCTACTTTCCAGGTAAAAAATAATCTTCGACTGAAATTTGACTTGTTCTTTTATTTTCTTTACTTTAGCTGTCCAAAGTTAGTACATCTAGTTATCTACTGCCATGCCAGAATTACAGAGTTCTTGTCAACTTGAGCTGATTATGGCATTTCTAATGTTCAAAGTCCCCCACAGCCACGCGCGTTTCTCACAGGCATTCTCTTTCTTGAGAAATTATTTGAGTTAATTTAGAACACGCATCGATTGCTTTTTCGTTAGTGATATACAGAAAAAGCAAGTAAATTAGATGTAAATTGGCCTCAAACTAATGGTGTGACTGTTTTAAAGATTTACTAGAAGTACAAGGACTAGGATGGAACAAGTCTCAAAATTGAGGACCAAAATGGTGTTTTAACCATATTGGAATTTAACTACAGGCATAACCTCACTTCAAATTTGCTATTTTAGATCGATCATTTGGTTCTTTGGTTTGGTTTGATGAGATTTGCTGTGTTAGTTCACTCTTGATCTCTTCCCTTGGTTTTTTAGAATTAGTACAAGAAAACGACAAAAGTCTAACTGTATGCGTAACAAGTCAAGTCTACCGCTAGCAGATATTGTCCTCTTTAGGCTTTCCCCTTCCGGGCTTCCCCTCAAGATTTTAAAACGCGTCTACTAGGGAGTGGATTTTACACTCTTATAAGGAATGTTTTATTCCCTTCTCCATCCAACGCGGGATCGCACATTTTGACTCTCTCTGAACAGGGGTTCTGTTCAACCACACTAACTGAGTTATCTACCTATGGCATGGAAAATCAAGCAACCTTTTAAAATCACTCACTTCTTTGAAGAGTCTCAAGTTTCAGGGTCAATGGAGCCAAAGCCATTTTCCTACCATTGCTAGAAAACTTGGATTTCTAGTAAAATGAGTGAAAGAGTGTGTAGTCTGAGGCTTTTTAGGTAACATTTCTATTTCTTTCTTGTTTCTTGTTTTTTCTTATTGAATTTTGAAAATACACGAAATGGTTACTGTCAGAATGGAAGATTATATATTCCTTTTGACTATGGTTACCCCAGTTTCATTTTTCAATTAAAAAACTGGTCAGCGATTTTTAGTTACTCCTGTAGAACAGTATTGTTATATCACTTCGGATGGAATTTTCAATTACCTTCTTTTTCCCTGATTTTAGAGTCAGAGTCGGGTGCTTTTACTACTACGAATCTTTGGTGGTATACTCCTCGAGCCATCCTTTGCCTTCTAAGTACTTGACAATGCTTTGGGATTCGCCTTCCTTTGTTACTCCTACTGGAGGTCTCACTTCTGATACAAGGGACACATAACTATGAATCTCCATGTCCAAGACAAGAAGCTATGCCAAAATCTTGAAAATGCTCACCACAGTTTATGATTTGCATTGTAGGACAACTATGTGGCCAATTCCTTCTGTTCATAATGTTAACTTTTGCAGCATTAGTGTTTGTTTTCTGTTTTTTTCCCCCTCCTTTTGCACTTTATAAGAGCTGTCATTCAATCCACTTCTGCAGGAACAAAAAGGACATGATTATTACAAACTAGAAAAGCATGTTTTGGATATGCTTATTGCGGGTCCTGCCTTGTGGATCCTTGGATCAATCCTCAACTCATGCCAAATCTACGAGAGAGCCGACGGTCATGTTCAGATCTTGCAACAGAGTGTCCACATTCCGTTTTTAATGGGCAGCTTGCTATTCTTTGTTGCTGCAGTCCTCAATGGCTTTGAGCAGGCCGGGTTAGCCCATCACGGACTCAAGCTTCTGGTATGTGCATGAATATTTATATTTTACTGTTGAACAGCGAACAAATGAGATGATGTTTATTGTGTTATTTATAGCATATAATGTATAGAAGTATTACTATGTTATATTGCAGATTGTCCGTCTTCAAGTAAAAGAGTATTGATCTATTTTTGTTTGTTTTGAATTATAGGTTTATACCTTCTGCATAATCATATACTTCTATTACTTTTAGTTTCTTAACTTTCTTATCGTGCGAGATCGTATCAAAGAGGAGTTTGCTGGTATATAATGTCTATAATTCACTTAATCACCTAATGTTCTGTTTTCGTGATTATGAGTAGTACTTCAATATTTGTTCAAGGGAAGAAATTCTGACTTGGAGTCTCTGCATTTTTATAACGAAGTGGTTGTACAATGAATGGCATCCAAATGAAGTGATGTGAATGTCGATGCAGGGCAAAAACTGGGTTTGGTTAGGCATCTTTGGGAGCTTGTCACTCTTGTTAGGCGGATTGGCAAACGTGCATAAGGTATTCAAGATGCAGCAGTTTGATGGATTGCGACTTGAGAAGCTTCGAGGAGGGGCGAACGAGCGTCTTCTCGGAGAACGAGAAGGCAGGATTCCCCTAATCCTAGAGGATCAGGGGCGGAGAAAACGACTCTCAGATGAAGAAAAGGGAAGGCAAGCCGCTCCAACCCCTTATAAAGATGTCCTTGTAGGCCAAACTTCCTGA

mRNA sequence

ATGGTGAAGCTCGCTTCCGCTAGGGATTTCAGTGCGTATGGCTCTCGGGCGGCCCGGAGCCGGGCGGAGTACATAAACGCCGGCCTCTACTTGTTCGCCACTATCCTTCTTCTCGGCGGATTTGTGGCTCAGCTTTCGCGCGAGGCCAAATCCGGTTTGGCCCTAATTGTGCTCGCGGCTGCGCTAATTTTGATTGTTAATGTGCACGATCTCTTCGCGCATCTCGCCGGAATCGATTACCGGTTGCCGCTGCTGGCCCAGTACGACGTCCAGCTTCTGTTTGTGGAATTTGCTGTTCCATTTCTTCAGGCGATTGGATCGTTGCTCTTGTTGTTGGGTACTCTGTTTCTTCTAATTCAGGAACAAAAAGGACATGATTATTACAAACTAGAAAAGCATGTTTTGGATATGCTTATTGCGGGTCCTGCCTTGTGGATCCTTGGATCAATCCTCAACTCATGCCAAATCTACGAGAGAGCCGACGGTCATGTTCAGATCTTGCAACAGAGTGTCCACATTCCGTTTTTAATGGGCAGCTTGCTATTCTTTGTTGCTGCAGTCCTCAATGGCTTTGAGCAGGCCGGGTTAGCCCATCACGGACTCAAGCTTCTGGGCAAAAACTGGGTTTGGTTAGGCATCTTTGGGAGCTTGTCACTCTTGTTAGGCGGATTGGCAAACGTGCATAAGGTATTCAAGATGCAGCAGTTTGATGGATTGCGACTTGAGAAGCTTCGAGGAGGGGCGAACGAGCGTCTTCTCGGAGAACGAGAAGGCAGGATTCCCCTAATCCTAGAGGATCAGGGGCGGAGAAAACGACTCTCAGATGAAGAAAAGGGAAGGCAAGCCGCTCCAACCCCTTATAAAGATGTCCTTGTAGGCCAAACTTCCTGA

Coding sequence (CDS)

ATGGTGAAGCTCGCTTCCGCTAGGGATTTCAGTGCGTATGGCTCTCGGGCGGCCCGGAGCCGGGCGGAGTACATAAACGCCGGCCTCTACTTGTTCGCCACTATCCTTCTTCTCGGCGGATTTGTGGCTCAGCTTTCGCGCGAGGCCAAATCCGGTTTGGCCCTAATTGTGCTCGCGGCTGCGCTAATTTTGATTGTTAATGTGCACGATCTCTTCGCGCATCTCGCCGGAATCGATTACCGGTTGCCGCTGCTGGCCCAGTACGACGTCCAGCTTCTGTTTGTGGAATTTGCTGTTCCATTTCTTCAGGCGATTGGATCGTTGCTCTTGTTGTTGGGTACTCTGTTTCTTCTAATTCAGGAACAAAAAGGACATGATTATTACAAACTAGAAAAGCATGTTTTGGATATGCTTATTGCGGGTCCTGCCTTGTGGATCCTTGGATCAATCCTCAACTCATGCCAAATCTACGAGAGAGCCGACGGTCATGTTCAGATCTTGCAACAGAGTGTCCACATTCCGTTTTTAATGGGCAGCTTGCTATTCTTTGTTGCTGCAGTCCTCAATGGCTTTGAGCAGGCCGGGTTAGCCCATCACGGACTCAAGCTTCTGGGCAAAAACTGGGTTTGGTTAGGCATCTTTGGGAGCTTGTCACTCTTGTTAGGCGGATTGGCAAACGTGCATAAGGTATTCAAGATGCAGCAGTTTGATGGATTGCGACTTGAGAAGCTTCGAGGAGGGGCGAACGAGCGTCTTCTCGGAGAACGAGAAGGCAGGATTCCCCTAATCCTAGAGGATCAGGGGCGGAGAAAACGACTCTCAGATGAAGAAAAGGGAAGGCAAGCCGCTCCAACCCCTTATAAAGATGTCCTTGTAGGCCAAACTTCCTGA

Protein sequence

MVKLASARDFSAYGSRAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAAALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFAVPFLQAIGSLLLLLGTLFLLIQEQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLMGSLLFFVAAVLNGFEQAGLAHHGLKLLGKNWVWLGIFGSLSLLLGGLANVHKVFKMQQFDGLRLEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKGRQAAPTPYKDVLVGQTS
Homology
[Close]
BLAST of Carg14028 vs. NCBI nr
Match: XP_022995388.1 (uncharacterized protein LOC111490949 [Cucurbita maxima])

HSP 1 Score: 550.1 bits (1416), Expect = 4.7e-153
Identity = 287/296 (96.96%), Postives = 290/296 (97.97%), Query Frame = 0 

Query: 1   MVKLASARDFSAYGSRAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAA 60
           MVKLASARDF AYG RAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAA
Sbjct: 1   MVKLASARDFRAYGPRAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAA 60

Query: 61  ALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFAVPFLQAIGSLLLLLGTLFLLIQ 120
           ALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEF+VPFLQAIGSLLL LGTLFLLIQ
Sbjct: 61  ALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFSVPFLQAIGSLLLSLGTLFLLIQ 120

Query: 121 EQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLMGSL 180
           EQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFL+GSL
Sbjct: 121 EQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNGFEQAGLAHHGLKLLGKNWVWLGIFGSLSLLLGGLANVHKVFKMQQFDGLR 240
           LFFVAAVLNGFEQAGLAH GLKLLGKNWVW GIFGSLSLLLGGL NVHKVFKMQQFDGLR
Sbjct: 181 LFFVAAVLNGFEQAGLAHRGLKLLGKNWVWFGIFGSLSLLLGGLGNVHKVFKMQQFDGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKGRQAAPTPYKDVLVGQTS 297
           LEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKGRQA+PTPYKDVLVGQTS
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKGRQASPTPYKDVLVGQTS 296

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BLAST of Carg14028 vs. NCBI nr
Match: XP_008437579.1 (PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 [Cucumis melo])

HSP 1 Score: 494.6 bits (1272), Expect = 2.4e-136
Identity = 256/295 (86.78%), Postives = 271/295 (91.86%), Query Frame = 0 

Query: 1   MVKLASARDFSAYGSRAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAA 60
           MVKL SARDF  YG R  R+RAEYINAGLYLFATILLLGGFVAQLSRE KSGLALI+LA 
Sbjct: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60

Query: 61  ALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFAVPFLQAIGSLLLLLGTLFLLIQ 120
           +LI IVN+HDLFAHLAGID+RLPLL QYD QL FVEFAVPFLQAIGSLLL L  LFLLIQ
Sbjct: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120

Query: 121 EQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLMGSL 180
           E+KGHDY KLEKH  +MLIAGPALW+LGSI NSCQIYERADGHVQILQQSVHIPFL+GSL
Sbjct: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNGFEQAGLAHHGLKLLGKNWVWLGIFGSLSLLLGGLANVHKVFKMQQFDGLR 240
           LFFVAAVLN +EQ GLAHHGLKLLGKNW+WLGIFGSLSLLLGGLANV KVFKMQQF+GLR
Sbjct: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKGRQAAPTPYKDVLVGQT 296
           LEKLRGGANERLLGEREGRIPLILEDQGRRKR SDEE+GR+A PTPYKDVLVGQ+
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQS 295

[Close]
BLAST of Carg14028 vs. NCBI nr
Match: XP_011654624.1 (PREDICTED: uncharacterized protein LOC105435425 [Cucumis sativus] >KGN49880.1 hypothetical protein Csa_5G139580 [Cucumis sativus])

HSP 1 Score: 488.0 bits (1255), Expect = 2.2e-134
Identity = 253/296 (85.47%), Postives = 269/296 (90.88%), Query Frame = 0 

Query: 1   MVKLASARDFSAYGSRAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAA 60
           MVKL SARDF  YG R+ R+RAEYINAGLYLFATILLLGGFVAQLSRE KSGLALI+LA 
Sbjct: 1   MVKLVSARDFRVYGPRSVRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60

Query: 61  ALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFAVPFLQAIGSLLLLLGTLFLLIQ 120
           +L  IVN+HDLFAHLAGIDYRLPLL QYD QL FVEFAVPFLQAIGSLLL    LFLLIQ
Sbjct: 61  SLFAIVNLHDLFAHLAGIDYRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSFAALFLLIQ 120

Query: 121 EQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLMGSL 180
           E+KGHDY+KLEKH  +MLIAGPALW+LGSI NSCQIYERAD HVQILQQSVHIPFL+GSL
Sbjct: 121 EKKGHDYHKLEKHASNMLIAGPALWMLGSIHNSCQIYERADAHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNGFEQAGLAHHGLKLLGKNWVWLGIFGSLSLLLGGLANVHKVFKMQQFDGLR 240
           LFFVAAVLN +EQ GLAHHGLKLLGKNW+WLGIFGSLS LLGGLANV KVFKMQQF+GLR
Sbjct: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSFLLGGLANVLKVFKMQQFEGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKGR-QAAPTPYKDVLVGQT 296
           LEKLRGGANERLLGEREGRIPLILEDQGRRKR SDEE+GR +A PTPYKDVLVGQ+
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGRVEARPTPYKDVLVGQS 296

[Close]
BLAST of Carg14028 vs. NCBI nr
Match: XP_022158041.1 (polypyrimidine tract-binding protein homolog 2-like [Momordica charantia])

HSP 1 Score: 471.5 bits (1212), Expect = 2.1e-129
Identity = 247/297 (83.16%), Postives = 266/297 (89.56%), Query Frame = 0 

Query: 1   MVKLASARDFSAYGSRAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAA 60
           MVKL SARDF AYG R +RSRAEYINAGLYLFAT++LLGGFVAQLSREAKSGLALI+LA+
Sbjct: 1   MVKLVSARDFRAYGPRRSRSRAEYINAGLYLFATVVLLGGFVAQLSREAKSGLALILLAS 60

Query: 61  ALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFAVPFLQAIGSLLLLLGTLFLLIQ 120
           ALI IVN HDLFAHLAGIDYRLPLL QYD QL  VEFAVP +QAIG+LL LL  LFLLIQ
Sbjct: 61  ALIAIVNFHDLFAHLAGIDYRLPLLVQYDPQLALVEFAVPIVQAIGALLFLLAALFLLIQ 120

Query: 121 EQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLMGSL 180
           E  G+ YYKLEK   DMLIAGPALW+LGSI NSCQIYERADGHVQILQQSVHIPFL+GSL
Sbjct: 121 EHNGYAYYKLEKCACDMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNGFEQAGLAHHGLKLLGKNWVWLGIFGSLSLLLGGLANVHKVFKMQQFDGLR 240
           LFFVAAVLN +EQAGLAHHGL+LLG+NWVWLGIFGSLSL+LGG ANV KVFKMQQ DGLR
Sbjct: 181 LFFVAAVLNSYEQAGLAHHGLRLLGRNWVWLGIFGSLSLILGGWANVLKVFKMQQLDGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKGRQA-APTPYKDVLVGQTS 297
           LEKLRGGA ERLLGEREG++PLILE+Q RRKR +DEEKGRQ   PTPYKDVLVGQ+S
Sbjct: 241 LEKLRGGAYERLLGEREGQVPLILEEQRRRKRQADEEKGRQVMGPTPYKDVLVGQSS 297

[Close]
BLAST of Carg14028 vs. NCBI nr
Match: XP_021656018.1 (uncharacterized protein LOC110646779 [Hevea brasiliensis])

HSP 1 Score: 392.5 bits (1007), Expect = 1.3e-105
Identity = 203/302 (67.22%), Postives = 242/302 (80.13%), Query Frame = 0 

Query: 1   MVKLASARDFSAYGSRAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAA 60
           MVKLASAR+   YG R +R+RAEYINAGLYLFATI+L+GGF A+ S E +SGL L+ +A 
Sbjct: 1   MVKLASARESRMYGPRLSRNRAEYINAGLYLFATIVLIGGFAAEFSMEPRSGLVLVFIAL 60

Query: 61  ALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFAVPFLQAIGSLLLLLGTLFLLIQ 120
           ALI+ VN+HDL AHLAGIDYRLPL+  YD QL  VEFAVP +QA+G+LLL LG  FL +Q
Sbjct: 61  ALIMFVNLHDLVAHLAGIDYRLPLMG-YDPQLALVEFAVPVVQALGALLLFLGIFFLFLQ 120

Query: 121 EQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLMGSL 180
           E+KG+ Y+KL+KH L+MLIAGPALW+LGSI NSCQIYERADGHVQILQ+SVHIPFLMGSL
Sbjct: 121 EEKGYGYFKLDKHALNMLIAGPALWVLGSIHNSCQIYERADGHVQILQESVHIPFLMGSL 180

Query: 181 LFFVAAVLNGFEQAGLAHHGLKLLGKNWVWLGIFGSLSLLLGGLANVHKVFKMQQFDGLR 240
           LFFV A+LN  EQAGL HHG+ LLG+  VW+GIFGS+ L +GGL N  KVFKMQQ DGLR
Sbjct: 181 LFFVGAMLNSQEQAGLDHHGVLLLGRTMVWMGIFGSILLFIGGLTNAVKVFKMQQIDGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKG-------RQAAPTPYKDVLVG 296
           LEKLRGGA E L+ +REG++PLI ++Q RR+R+ +E K            PTPYKDVL+G
Sbjct: 241 LEKLRGGAQESLMQQREGQLPLIADEQWRRQRVIEETKAVPVPVLVPVTVPTPYKDVLLG 300

[Close]
BLAST of Carg14028 vs. TAIR10
Match: AT5G24130.1 (unknown protein)

HSP 1 Score: 324.7 bits (831), Expect = 5.9e-89
Identity = 181/316 (57.28%), Postives = 219/316 (69.30%), Query Frame = 0 

Query: 1   MVKLASARDFSAYGSRAARSRAEYINAGLYLFATILLLGGFVAQ-LSREAKSGLALIVLA 60
           MVKLA+AR+   YG R  RSRAEYINAGLYLFAT++L+GGF A   S E +SGL LI+LA
Sbjct: 1   MVKLATAREIRTYGPRLGRSRAEYINAGLYLFATVVLIGGFTATGFSWEPRSGLVLILLA 60

Query: 61  AALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFAVPFLQAIGSLLLLLGTLFLLI 120
             LI  VNVHDL AHLAGIDYRL L+ +YD+QL  VEFAVP +Q  GS++  LG  F+  
Sbjct: 61  LVLITAVNVHDLVAHLAGIDYRLRLM-EYDLQLGLVEFAVPLVQIAGSVVFFLGIFFVFH 120

Query: 121 QEQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLMGS 180
           Q +    Y   E H L++LIAGP LW++GSI NSCQIYERAD HVQILQQ V+IPFL+GS
Sbjct: 121 QAETKRGYSGREHHALNLLIAGPLLWLIGSIHNSCQIYERADSHVQILQQCVYIPFLVGS 180

Query: 181 LLFFVAAVLNGFEQAGLAHHGLKLLGKNWVWLGIFGSLSLLLGGLANVHKVFKMQQFDGL 240
           LLF V+AVLN  + +G +  GLKLLG+ W+WLGI G++ L +GGL NV KVF   Q  GL
Sbjct: 181 LLFLVSAVLNSLDISGSSRSGLKLLGERWIWLGISGAICLFVGGLLNVVKVFNFVQISGL 240

Query: 241 RLEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKGRQA----------------- 295
           RLEKLRGGA +RLL  REG +PL+ E++  RK  +D E   +A                 
Sbjct: 241 RLEKLRGGAQDRLLEGREGYLPLVAEEERIRKMEADHEASSRAKPRAHTTSKAGEGATET 300

[Close]
BLAST of Carg14028 vs. TrEMBL
Match: tr|A0A1S3AUZ4|A0A1S3AUZ4_CUCME (LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 OS=Cucumis melo OX=3656 GN=LOC103482951 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 1.6e-136
Identity = 256/295 (86.78%), Postives = 271/295 (91.86%), Query Frame = 0 

Query: 1   MVKLASARDFSAYGSRAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAA 60
           MVKL SARDF  YG R  R+RAEYINAGLYLFATILLLGGFVAQLSRE KSGLALI+LA 
Sbjct: 1   MVKLVSARDFRVYGPRPLRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60

Query: 61  ALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFAVPFLQAIGSLLLLLGTLFLLIQ 120
           +LI IVN+HDLFAHLAGID+RLPLL QYD QL FVEFAVPFLQAIGSLLL L  LFLLIQ
Sbjct: 61  SLIAIVNLHDLFAHLAGIDHRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSLAALFLLIQ 120

Query: 121 EQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLMGSL 180
           E+KGHDY KLEKH  +MLIAGPALW+LGSI NSCQIYERADGHVQILQQSVHIPFL+GSL
Sbjct: 121 EKKGHDYDKLEKHASNMLIAGPALWMLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNGFEQAGLAHHGLKLLGKNWVWLGIFGSLSLLLGGLANVHKVFKMQQFDGLR 240
           LFFVAAVLN +EQ GLAHHGLKLLGKNW+WLGIFGSLSLLLGGLANV KVFKMQQF+GLR
Sbjct: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSLLLGGLANVLKVFKMQQFEGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKGRQAAPTPYKDVLVGQT 296
           LEKLRGGANERLLGEREGRIPLILEDQGRRKR SDEE+GR+A PTPYKDVLVGQ+
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGREARPTPYKDVLVGQS 295

[Close]
BLAST of Carg14028 vs. TrEMBL
Match: tr|A0A0A0KJH6|A0A0A0KJH6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139580 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 1.5e-134
Identity = 253/296 (85.47%), Postives = 269/296 (90.88%), Query Frame = 0 

Query: 1   MVKLASARDFSAYGSRAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAA 60
           MVKL SARDF  YG R+ R+RAEYINAGLYLFATILLLGGFVAQLSRE KSGLALI+LA 
Sbjct: 1   MVKLVSARDFRVYGPRSVRNRAEYINAGLYLFATILLLGGFVAQLSREPKSGLALILLAT 60

Query: 61  ALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFAVPFLQAIGSLLLLLGTLFLLIQ 120
           +L  IVN+HDLFAHLAGIDYRLPLL QYD QL FVEFAVPFLQAIGSLLL    LFLLIQ
Sbjct: 61  SLFAIVNLHDLFAHLAGIDYRLPLLVQYDAQLFFVEFAVPFLQAIGSLLLSFAALFLLIQ 120

Query: 121 EQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLMGSL 180
           E+KGHDY+KLEKH  +MLIAGPALW+LGSI NSCQIYERAD HVQILQQSVHIPFL+GSL
Sbjct: 121 EKKGHDYHKLEKHASNMLIAGPALWMLGSIHNSCQIYERADAHVQILQQSVHIPFLIGSL 180

Query: 181 LFFVAAVLNGFEQAGLAHHGLKLLGKNWVWLGIFGSLSLLLGGLANVHKVFKMQQFDGLR 240
           LFFVAAVLN +EQ GLAHHGLKLLGKNW+WLGIFGSLS LLGGLANV KVFKMQQF+GLR
Sbjct: 181 LFFVAAVLNSYEQVGLAHHGLKLLGKNWIWLGIFGSLSFLLGGLANVLKVFKMQQFEGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKGR-QAAPTPYKDVLVGQT 296
           LEKLRGGANERLLGEREGRIPLILEDQGRRKR SDEE+GR +A PTPYKDVLVGQ+
Sbjct: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRHSDEERGRVEARPTPYKDVLVGQS 296

[Close]
BLAST of Carg14028 vs. TrEMBL
Match: tr|B9SBE0|B9SBE0_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0716290 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.1e-105
Identity = 206/298 (69.13%), Postives = 240/298 (80.54%), Query Frame = 0 

Query: 1   MVKLASARDFSAYGSRAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAA 60
           MVKLASAR+   YG R  R+RAEYINAGLY+FATI+LLGGF A  S E KSGL L+ +A 
Sbjct: 1   MVKLASARESRMYGPRLGRNRAEYINAGLYVFATIVLLGGFAALFSMEPKSGLVLMFIAL 60

Query: 61  ALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFAVPFLQAIGSLLLLLGTLFLLIQ 120
            LI+ VN+HDLFAHLAGIDYRLPL+  +DVQL  VEFAVP +QA+G+LLL LG  FL +Q
Sbjct: 61  GLIMAVNLHDLFAHLAGIDYRLPLMG-FDVQLALVEFAVPIVQALGALLLFLGIFFLFLQ 120

Query: 121 EQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLMGSL 180
           E+K + YYKLEKH L+MLIAGP LWILGSI NSCQIYERADGHVQILQ+SVHIPFLMGSL
Sbjct: 121 EEKRYGYYKLEKHSLNMLIAGPILWILGSIHNSCQIYERADGHVQILQESVHIPFLMGSL 180

Query: 181 LFFVAAVLNGFEQAGLAHHGLKLLGKNWVWLGIFGSLSLLLGGLANVHKVFKMQQFDGLR 240
           LF V A+LN  EQ GL HHGL+LLG++ VW+GIFG+L L +GGL NV KVFKMQQ DGLR
Sbjct: 181 LFLVGAILNIQEQDGLDHHGLQLLGRSLVWMGIFGTLLLFIGGLTNVVKVFKMQQIDGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKG---RQAAPTPYKDVLVGQT 296
           LEKLRGGA ERL+ +REG++PLI E+  RRK + +E K        PTPYKDVL+GQ+
Sbjct: 241 LEKLRGGAQERLIQQREGQLPLIAEEHRRRKMIIEETKAVPVPDPVPTPYKDVLIGQS 297

[Close]
BLAST of Carg14028 vs. TrEMBL
Match: tr|A0A2K1Y6J8|A0A2K1Y6J8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G000100v3 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 2.3e-103
Identity = 199/297 (67.00%), Postives = 241/297 (81.14%), Query Frame = 0 

Query: 1   MVKLASARDFSAYGSRAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAA 60
           MVKLASAR+   YG+R +++RAEY+NAGLY+FATI+L+GGFVA+LS+E K GL L+++A 
Sbjct: 1   MVKLASARESRMYGARLSKNRAEYMNAGLYVFATIVLIGGFVAELSKETKPGLVLLLIAL 60

Query: 61  ALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFAVPFLQAIGSLLLLLGTLFLLIQ 120
            LI +VN+HDL AHLAGIDYR  L+  YD QL  VEFAVP +QA+G+LL  LG LFL IQ
Sbjct: 61  LLITVVNLHDLVAHLAGIDYRWRLMG-YDTQLALVEFAVPVIQALGTLLSFLGILFLFIQ 120

Query: 121 EQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLMGSL 180
           E KG+D++KLE+H L++L AGPA W+LGS+ NSCQIYERADGHVQILQQSVHIPFLMGS 
Sbjct: 121 EYKGYDHFKLERHALNLLAAGPAFWVLGSLHNSCQIYERADGHVQILQQSVHIPFLMGSS 180

Query: 181 LFFVAAVLNGFEQAGLAHHGLKLLGKNWVWLGIFGSLSLLLGGLANVHKVFKMQQFDGLR 240
           LF V ++LN  EQAG  HHGL+LLGK WVW+G FGSL   +GGL NV KVF+MQQ DGLR
Sbjct: 181 LFLVGSILNIREQAGWGHHGLELLGKTWVWIGFFGSLMFFIGGLTNVVKVFEMQQIDGLR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRR-KRLSDEEKGRQ-AAPTPYKDVLVGQT 296
           LEKLRGGA ERL+ EREG+ PLIL +  RR KR+++E +     APTPYKDVLVGQ+
Sbjct: 241 LEKLRGGAQERLVREREGQAPLILAEAERRGKRIAEETRAAPIPAPTPYKDVLVGQS 296

[Close]
BLAST of Carg14028 vs. TrEMBL
Match: tr|A0A2I4E044|A0A2I4E044_9ROSI (uncharacterized protein LOC108985068 OS=Juglans regia OX=51240 GN=LOC108985068 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.9e-103
Identity = 203/296 (68.58%), Postives = 238/296 (80.41%), Query Frame = 0 

Query: 1   MVKLASARDFSAYGSRAARSRAEYINAGLYLFATILLLGGFVAQLSREAKSGLALIVLAA 60
           MVKLASAR+   YG R AR+R+EY+NAGLYLFATI+LLGGF AQ S E KSGL L+++A 
Sbjct: 1   MVKLASARESRMYGPRLARNRSEYVNAGLYLFATIVLLGGFAAQFSSEPKSGLVLLLIAL 60

Query: 61  ALILIVNVHDLFAHLAGIDYRLPLLAQYDVQLLFVEFAVPFLQAIGSLLLLLGTLFLLIQ 120
           AL+++VNVHDL AHLAG DYRL L+  +D QL FVEFAVP +QA+GS+L  LG LFL IQ
Sbjct: 61  ALMIMVNVHDLLAHLAGFDYRLQLMG-FDPQLAFVEFAVPVVQALGSVLFFLGILFLFIQ 120

Query: 121 EQKGHDYYKLEKHVLDMLIAGPALWILGSILNSCQIYERADGHVQILQQSVHIPFLMGSL 180
           E+KG+ Y KLEKH L+MLIAGP LW+LGSI NSCQIYERA GHVQ+LQ +VHIPFLMGS+
Sbjct: 121 EEKGYGYLKLEKHGLNMLIAGPVLWVLGSIHNSCQIYERAGGHVQMLQHTVHIPFLMGSV 180

Query: 181 LFFVAAVLNGFEQAGLAHHGLKLLGKNWVWLGIFGSLSLLLGGLANVHKVFKMQQFDGLR 240
           LF V A+LN  EQAGLAHHGL LLG+ W+WLGIFGSL   LGGLANV KVFKMQQ DG+R
Sbjct: 181 LFLVGAILNFREQAGLAHHGLDLLGRTWIWLGIFGSLLFFLGGLANVVKVFKMQQLDGVR 240

Query: 241 LEKLRGGANERLLGEREGRIPLILEDQGRRKRLSDEEKGRQAAP-TPYKDVLVGQT 296
           LEKLRGGA ERL+  REG++PLILE+Q  R+RL  EE    + P T +KD LV  +
Sbjct: 241 LEKLRGGAQERLMRLREGQVPLILEEQ--RRRLQPEEPKVPSGPTTSFKDALVSSS 293

The following BLAST results are available for this feature:
BLAST of Carg14028 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022995388.14.7e-15396.96uncharacterized protein LOC111490949 [Cucurbita maxima][more]
XP_008437579.12.4e-13686.78PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 [... [more]
XP_011654624.12.2e-13485.47PREDICTED: uncharacterized protein LOC105435425 [Cucumis sativus] >KGN49880.1 hy... [more]
XP_022158041.12.1e-12983.16polypyrimidine tract-binding protein homolog 2-like [Momordica charantia][more]
XP_021656018.11.3e-10567.22uncharacterized protein LOC110646779 [Hevea brasiliensis][more]
BLAST of Carg14028 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24130.15.9e-8957.28unknown protein[more]
BLAST of Carg14028 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg14028 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AUZ4|A0A1S3AUZ4_CUCME1.6e-13686.78LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 OS=Cucumis m... [more]
tr|A0A0A0KJH6|A0A0A0KJH6_CUCSA1.5e-13485.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139580 PE=4 SV=1[more]
tr|B9SBE0|B9SBE0_RICCO1.1e-10569.13Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0716290 PE=4 SV=1[more]
tr|A0A2K1Y6J8|A0A2K1Y6J8_POPTR2.3e-10367.00Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G000100v3 PE=... [more]
tr|A0A2I4E044|A0A2I4E044_9ROSI3.9e-10368.58uncharacterized protein LOC108985068 OS=Juglans regia OX=51240 GN=LOC108985068 P... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14028-RACarg14028-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..296
NoneNo IPR availablePANTHERPTHR34967:SF1SUBFAMILY NOT NAMEDcoord: 1..295
NoneNo IPR availablePANTHERPTHR34967FAMILY NOT NAMEDcoord: 1..295

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg14028Cla004907Watermelon (97103) v1carwmB0504
Carg14028Csa5G139580Cucumber (Chinese Long) v2carcuB0536
Carg14028MELO3C005871Melon (DHL92) v3.5.1carmeB0508
Carg14028ClCG01G000560Watermelon (Charleston Gray)carwcgB0492
Carg14028CSPI05G03330Wild cucumber (PI 183967)carcpiB0543
Carg14028Cucsa.202000Cucumber (Gy14) v1carcgyB0583
Carg14028CmoCh02G011310Cucurbita moschata (Rifu)carcmoB0694
Carg14028Lsi09G000370Bottle gourd (USVL1VR-Ls)carlsiB457
Carg14028Cp4.1LG05g06170Cucurbita pepo (Zucchini)carcpeB0718
Carg14028CsaV3_5G000660Cucumber (Chinese Long) v3carcucB0541
Carg14028Cla97C01G000610Watermelon (97103) v2carwmbB0529
Carg14028Bhi12G000543Wax gourdcarwgoB0615
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg14028Silver-seed gourdcarcarB329
Carg14028Silver-seed gourdcarcarB490
Carg14028Silver-seed gourdcarcarB494
Carg14028Cucumber (Gy14) v2carcgybB0513
Carg14028Cucurbita maxima (Rimu)carcmaB0712
Carg14028Cucurbita maxima (Rimu)carcmaB0713
Carg14028Cucurbita maxima (Rimu)carcmaB0714
Carg14028Cucurbita maxima (Rimu)carcmaB0716
Carg14028Cucurbita moschata (Rifu)carcmoB0691
Carg14028Cucurbita moschata (Rifu)carcmoB0692
Carg14028Cucurbita moschata (Rifu)carcmoB0693
Carg14028Cucurbita pepo (Zucchini)carcpeB0713
Carg14028Cucurbita pepo (Zucchini)carcpeB0714
Carg14028Melon (DHL92) v3.5.1carmeB0513
Carg14028Melon (DHL92) v3.6.1carmedB0514
Carg14028Melon (DHL92) v3.6.1carmedB0515
Carg14028Watermelon (Charleston Gray)carwcgB0495
Carg14028Watermelon (97103) v1carwmB0503
Carg14028Watermelon (97103) v2carwmbB0533
Carg14028Wax gourdcarwgoB0614
Carg14028Wax gourdcarwgoB0617