Carg13191 (gene) Silver-seed gourd

NameCarg13191
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPatatin
LocationCucurbita_argyrosperma_scaffold_101 : 854067 .. 858776 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGTAGAGGTAATGTAACTTCATTCAGCCTAGTTTGCTCTTGACTATCCTGTTCCGATTTTGGGGTTCACTGGAGAACTCAGAGGTTAATCAAAGGATTGTTCATCGTTTCTTTTCTTTTGCCTGTTATCGACACCTTTTGTGTTTTCCGTGGTTTCGATTAAGAAGGATTAGGGCGTTTTAGTAGGTTCATGGCAACGTGGTAAGTTTCAATTTATCCACTGGTTTAGATTTGCAGTTCTTTCTTAAGTCATCTACTGGTTTAGATTTTAATGTTTTCTCATTTAAATCCTCAGGCTGTACTCAGGGAAGTTCTTGAAAAGTTTCTTCCATCAATGCAGTTTTCACTTCTTCCTTTATTCCAGGGTGGGTATTTTAGTTTCACATCCTCTTGAATGTTCTTACTGTTTGTTCCTAGTTGGCTAAATGACTCTGGGCTGAAATAACGCTTTTGTGTAGATACCTAGCGCCAAGACCCGTCACAGTCTTCCGGAATAGACTACTACGCATTGATGGTGGTCTAACATTGTTCATGCCACCTACTTCTGCCTCTCAAACGGTATTTAATTGATAAATTTCTCAATGGTTTTTCGTATTTCAGTCACCCTGAAATTTTGCTTTTGGACGGTGTCGCAGGTGCGTGTATGTGCTTTCCCCGCTACCCGATTGGGCTTTGAAGGGATTGGGATCAGTCCAGACTGCAACCCTGAAAACAGAGCAGGGCCCAGAGAGGTAAATGAGTTCGACAAAGCTCGTCCAACTAGTAGACACATTGTTGTTTTCTCTTTGTAGTTTAGTTTGATCAAACTCTTGCATGTTCTGCATCATATCAGCTTTTCAACTGGGCTGGTGGAAGACGAAAGGCTGGTGGAGGACGCGGTTGTAACTAGCTGAAGCATAAAGTTATGATGGCGAATCAATCTAAATGGAATATGTAGCAGGCTTGGTGGTAAGTGCTTGTCTTAAACCCAAAACTTTCTGGATTGCTGCTGATCTTACTGCCTCAAAATGGTTAGAAACACATATATGAATCCCTTCAACAGAATAGAACAAAAGCCTTCATTCATGAATGTGAAGATAAAAATAATTATACAGGTAGATATCAAAAGTCCTGAGTGTATGATGGCCAAGTACAACATTCTCAGGATTTACATGTGCATTTTGCTGCTATTTTACTACATTCTCAGTACAAGTACAACATTCTTGTATTTTGTTTTCTTCATACAGTATATATATATCATTTCTTTTTCTTTGAACATCTTTCCATCTGAATTGGAAATAAATTGGTTGCATTAGTTTATTGTTTTTTTTTTTTTTTTTTCCTTTTTCCCTTTTGTTGTCCCCAAGTTGGTTGGCTTTGTTTTCGTACAGCTCGCTAAATTTTCTTTCATTTCAATGAAAGCTGTTTTCTTCATTTAAGAAAAAGTATATTGGTTCAGTTTGATTAACTTTTAAACCAAACTGTTGACAGAACTGGTCCATTCAGGCTTGATATGTGATGGCCAAACAAGATGAAAAAAAATAAAGAAACAATGGTGGTTCCGACAACAGAGAGGGGAAGAACAAAGCAATTGCTCTGGATGGGATTTTCGCACCTGCTAGGAATACTGGTATGATTCCAAGCCCAAGGCTGTGAAGTTGAATTTAAGTTTTTGGGAGACGTAGGAAGTAATTGTTGTTTTTGTTTTTATAATTGTTATTTGTTGGCTGTGAAGTGTGTGTTGCTTTAGCTTCTTTTAGATGTTACTCTGTTTTTTGGCACAGGGATTATGTCAGCATTTGACTGCAAGTTCTGGGATGTTTGATTTTGAGATGTTATAGTTTTCAGTATTTGCTTGTCTTTCAATGATAGAACGCCCATATTTCTTACAGTAGTATTCTATTTCCTGAACCCGCACACATCTTTGCATTTAGATTCATTTGAAAGGTCTTTTACCAAGGAATATGGTCTACCTATATATTTAGGATCTTCTCCACTCTTAAACAACATGAACTATGTTCACATTCATAATATTTGAAAGGACATAAGTAAGAAAAAGTAGTACCTAACGGAATGGAACCTCTAAGTTACAACCCTTAAGGAATAAGGTTGATTATGTCAAGGTTTAGTTGGTACAAGGAAGCATTAAGCCCTCATCTTAAACATATAAGGTAACACAAGGATTACTAAGGAAGACTTCTATTTTCAACAAAGGATTTTGAGATGAGAATCAAAAGGAACAAATGCCGGAATAAGTCATAGCCCCAAGACATAGTTAAGAACTAAAGTATGTAAGGACAATTTTAAGGACAAGTCGAAGATGGACAAACCCGTAAAAAAAGACCCTTAGGGAATTTGGAAAGACATAACTAGGAAAAAGGTAGTACACGAAGAACAAAAGCAACCTGTAAGTTACAATATGGTTGATTATGTCAAGGTTTGGTTGGTATAAGGAAGCATTAAGCTCTACCGTGAGATATAAGTTAACTCTAGGATTACATTTATATTCTCGTTAAAGGATGTTGAGATAAGAATCAAACGAAAAAAATGCTGAAATAATCCTTTAGTCTTTTAACTTATGTGTTGAAGCTTGGACTTATTACGACATGTTTTCCTTTTAATTCTCATCTCAACACAAGAATATAAGTCTACCGCGAGATATAAGTTAACTCTAGGATTTCACTTATATTCTCGTTAAAGGATGTTGAGATAAGAATCAAACGAAAAAAATGCTGAAATAATCCTTTAGTCTTTAACTTATGCGTTGAAGCTTGGACTTATTACGACATGTTTTCCTTTTAATTCTCATCTCAACACAAGAATATAAGTCTTCTTGGTAAACTTTGTGTTACCTTGTATCTTTGAGGGTTTCCTTATACCAACTAAGCCTTGACATAATCAACCATATTCATTAATAGTGGTAATTCAATTCTCATCTCAACACAAGAATATTCATTAATAGTGGTAATTCAATTCTCATCACAACACAAGAATATAAGTCTTCTTGGTAAACTTTGTGTTACCTTGTATCTTCGAGGGTTTCCTTATACCAACTAAGCCTTGACATAATCAACCATATTCATTAATAGTGGTAATTCAGAGGTTCTTGAGGGTCTCTTTTTTACGTGTTTCTCCCGTCCTTAAAATTGTCTTTTAGCACATTAGTCCTTAACTTATGTCTTTGGGCAATGGACTTATTCTGCCATTCGCTCCTTTTGATTCTCATCTAACATCCTTCTGTTCAGAAAATAAGTCTTGTTTGGTAAGATGGCTTCCTTATACCAACCAATCCTTTGACATAATCAACCATATTCTTTAATGATTGTAACTGTTCCTCTTGTTCCTTCGTGTACTACATTTTCCTAGTTATGTCTTTCCAAGTTTCTTGAGGCTCTATTTTACGGTTTTGTCCATCTTTGACTTGTCCTTAAAAACGTCATATAATCCTTTAGTCCTTAACTTATGCCTTGGAGGTTGGACATTTTCGGGACTAAAGGAAAAACTGCCGGAATTAGTCCAAGCTCCAAGACAAAATTCTCATTAAGATCTACCCTCAAATATATAAGTTAGTTAACCGAAGGATTAGCAAGGAAGACTTATATTCTCATTAAAGGATGAGACGAGAATCAAAAGAAAAAGAAAAAAATGCCGAAATAATCCTTTAGTCTTCAACTTGTGTTGACATAATCAACCTTATTCCATAAGGGTTGTAACTTAAAGGTTCCTCCTGTTTCTTCATGTACTACATTTTCTTAGTTATGTCTTTCTAAGTTTCTTGACACTCTCTTTTACGGTTTTGTCCATCTTCGACTTGTCCTTAAAAACGTCTTTTAATCATTTAGTCCTTAACTTATGTTTTGGAGGTTAACGCTTATGGCTTCCTTATACCAACTAAGACTTGACATAATAAGGACAAGCTAGAGAAGGACGATTATAAGGACAAGCTAGAGAAGGACAAACTCGTAAAAAAGACCCTTAAGGAACTTGGAACAACATAAAGAAGAAAAAGTAGTTGGGTATAAAGAAGGCAATACGCCCTAAACTCACAGATATAAGGTAACACAAGAATTACTAAGGAAGACTTATATTCTAAATAAAAAGATGTTAAGAAGATAGTCAAAAGGAACAAATGCCAGAATAAGTCCATGGCCTAAAATCATAAGTTAATAACTAAAGGACTTAAGGACAATTATAAGGACAAGCAGAAGAAAGGCAAACCAGGAACATGGAAGGACATAACTCAGAACAAGTAGTACAAGGAGGAACAAAAGGAACCGGTAAGATACAATCTTCAAGGAATAAGATTGATTATGTCAAGGCTTGTTGAGCATAAGGAAGACCGAACGCCCTAAACTCAAAGATATTGAGAAGACAGTCATAAGGCACAAACGTCAAGGCTTGTTGGGTATAAGGAATGTAATACACCCTAAACTCGAGACTTAAGTTAAGGACTAAACGATGTAAGAACGATTATAAGGACAAGCCACAAATGGACAAGCTTGTAAAAAGACCCTCAAAGAATTTGGAAGGACTTAACGAAGAACAAGTAGTACAAAAAAAGAACAAGAGAAACCTCTAAGATTCAACCCTTAAGAAATAATAGAAATTATGATTATTCATAACATAAATAGTTTCTAATAAAATTTGAACTTTTCACGGTTGTGATTATTTAGTTTTTATATTTTATATATTTTAATAGGTCTTCAAACTCTACTTTTGTATTTAA

mRNA sequence

ATGAAAAGTAGAGCGCCAAGACCCGTCACAGTCTTCCGGAATAGACTACTACGCATTGATGGTGGTCTAACATTGTTCATGCCACCTACTTCTGCCTCTCAAACGGTGCGTGTATGTGCTTTCCCCGCTACCCGATTGGGCTTTGAAGGGATTGGGATCAGTCCAGACTGCAACCCTGAAAACAGAGCAGGGCCCAGAGAGTTTAGTTTGATCAAACTCTTGCATGTTCTGCATCATATCAGCTTTTCAACTGGGCTGGTGGAAGACGAAAGGCTGGTGGAGGACGCGGTCTTCAAACTCTACTTTTGTATTTAA

Coding sequence (CDS)

ATGAAAAGTAGAGCGCCAAGACCCGTCACAGTCTTCCGGAATAGACTACTACGCATTGATGGTGGTCTAACATTGTTCATGCCACCTACTTCTGCCTCTCAAACGGTGCGTGTATGTGCTTTCCCCGCTACCCGATTGGGCTTTGAAGGGATTGGGATCAGTCCAGACTGCAACCCTGAAAACAGAGCAGGGCCCAGAGAGTTTAGTTTGATCAAACTCTTGCATGTTCTGCATCATATCAGCTTTTCAACTGGGCTGGTGGAAGACGAAAGGCTGGTGGAGGACGCGGTCTTCAAACTCTACTTTTGTATTTAA

Protein sequence

MKSRAPRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPREFSLIKLLHVLHHISFSTGLVEDERLVEDAVFKLYFCI
BLAST of Carg13191 vs. NCBI nr
Match: XP_022988780.1 (uncharacterized protein LOC111486017 [Cucurbita maxima])

HSP 1 Score: 133.3 bits (334), Expect = 4.9e-28
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0

Query: 5   APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 64
           APRPVTVFRNRL R+DGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG
Sbjct: 56  APRPVTVFRNRLPRVDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 115

Query: 65  PRE 68
           PRE
Sbjct: 116 PRE 118

BLAST of Carg13191 vs. NCBI nr
Match: XP_022943045.1 (patatin-like phospholipase domain-containing protein 2 [Cucurbita moschata])

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-26
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0

Query: 5   APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 64
           APRPVTVFRNRL  IDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG
Sbjct: 281 APRPVTVFRNRLC-IDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 340

Query: 65  PRE 68
           PRE
Sbjct: 341 PRE 342

BLAST of Carg13191 vs. NCBI nr
Match: XP_023513040.1 (patatin-like phospholipase domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-26
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0

Query: 5   APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 64
           APRPVTVFRNRL  IDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG
Sbjct: 279 APRPVTVFRNRLC-IDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 338

Query: 65  PRE 68
           PRE
Sbjct: 339 PRE 340

BLAST of Carg13191 vs. NCBI nr
Match: XP_004149962.1 (PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis sativus] >KGN57568.1 hypothetical protein Csa_3G214570 [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 5.9e-26
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0

Query: 5   APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 64
           APRPVTVFRNRL  IDGGLTLFMPPTSASQTVRVCAFPA+RLGFEGIGISPDCNPENRAG
Sbjct: 282 APRPVTVFRNRLC-IDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAG 341

Query: 65  PRE 68
           PRE
Sbjct: 342 PRE 343

BLAST of Carg13191 vs. NCBI nr
Match: XP_008456089.1 (PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis melo])

HSP 1 Score: 126.3 bits (316), Expect = 5.9e-26
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0

Query: 5   APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 64
           APRPVTVFRNRL  IDGGLTLFMPPTSASQTVRVCAFPA+RLGFEGIGISPDCNPENRAG
Sbjct: 285 APRPVTVFRNRLC-IDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAG 344

Query: 65  PRE 68
           PRE
Sbjct: 345 PRE 346

BLAST of Carg13191 vs. TAIR10
Match: AT1G33270.1 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein)

HSP 1 Score: 90.5 bits (223), Expect = 6.6e-19
Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0

Query: 5   APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 64
           APRP T+FRNRL  +DGGLTLFMPPT+A++TVRVCAF A+    +GI I PDCNP NRA 
Sbjct: 257 APRPATMFRNRLC-VDGGLTLFMPPTAAAKTVRVCAFSASNFKLKGIEICPDCNPLNRAT 316

Query: 65  PRE 68
            R+
Sbjct: 317 SRQ 318

BLAST of Carg13191 vs. TrEMBL
Match: tr|A0A1S3C2I5|A0A1S3C2I5_CUCME (Patatin OS=Cucumis melo OX=3656 GN=LOC103496128 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.9e-26
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0

Query: 5   APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 64
           APRPVTVFRNRL  IDGGLTLFMPPTSASQTVRVCAFPA+RLGFEGIGISPDCNPENRAG
Sbjct: 285 APRPVTVFRNRLC-IDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAG 344

Query: 65  PRE 68
           PRE
Sbjct: 345 PRE 346

BLAST of Carg13191 vs. TrEMBL
Match: tr|A0A0A0L746|A0A0A0L746_CUCSA (Patatin OS=Cucumis sativus OX=3659 GN=Csa_3G214570 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.9e-26
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0

Query: 5   APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 64
           APRPVTVFRNRL  IDGGLTLFMPPTSASQTVRVCAFPA+RLGFEGIGISPDCNPENRAG
Sbjct: 282 APRPVTVFRNRLC-IDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAG 341

Query: 65  PRE 68
           PRE
Sbjct: 342 PRE 343

BLAST of Carg13191 vs. TrEMBL
Match: tr|A0A2P2MT82|A0A2P2MT82_RHIMU (Patatin OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-24
Identity = 64/96 (66.67%), Postives = 70/96 (72.92%), Query Frame = 0

Query: 5   APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 64
           APRPVTVFRNRL  IDGGLTLFMPPTSA+QTVRVCAFPATRLG EGIGISPDCNP+NRA 
Sbjct: 110 APRPVTVFRNRLC-IDGGLTLFMPPTSAAQTVRVCAFPATRLGLEGIGISPDCNPKNRAT 169

Query: 65  PREFSLIKLLHVLHHISFSTGLVEDERLVEDAVFKL 101
           PRE              F+  L   E  V D++F+L
Sbjct: 170 PREL-------------FNWALEPAEDSVLDSLFEL 191

BLAST of Carg13191 vs. TrEMBL
Match: tr|A0A2P2MT68|A0A2P2MT68_RHIMU (Patatin OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-24
Identity = 64/96 (66.67%), Postives = 70/96 (72.92%), Query Frame = 0

Query: 5   APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 64
           APRPVTVFRNRL  IDGGLTLFMPPTSA+QTVRVCAFPATRLG EGIGISPDCNP+NRA 
Sbjct: 309 APRPVTVFRNRLC-IDGGLTLFMPPTSAAQTVRVCAFPATRLGLEGIGISPDCNPKNRAT 368

Query: 65  PREFSLIKLLHVLHHISFSTGLVEDERLVEDAVFKL 101
           PRE              F+  L   E  V D++F+L
Sbjct: 369 PREL-------------FNWALEPAEDSVLDSLFEL 390

BLAST of Carg13191 vs. TrEMBL
Match: tr|A0A2N9IPN8|A0A2N9IPN8_FAGSY (Patatin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54207 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.8e-23
Identity = 54/63 (85.71%), Postives = 58/63 (92.06%), Query Frame = 0

Query: 5   APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAG 64
           APRP T+FRNRL  IDGGLTLFMPPTSA+QT+RVCAFPA+RLG EGIGISPDCNPENRA 
Sbjct: 371 APRPATLFRNRLC-IDGGLTLFMPPTSAAQTIRVCAFPASRLGLEGIGISPDCNPENRAS 430

Query: 65  PRE 68
           PRE
Sbjct: 431 PRE 432

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022988780.14.9e-2896.83uncharacterized protein LOC111486017 [Cucurbita maxima][more]
XP_022943045.12.0e-2696.83patatin-like phospholipase domain-containing protein 2 [Cucurbita moschata][more]
XP_023513040.12.0e-2696.83patatin-like phospholipase domain-containing protein 2 [Cucurbita pepo subsp. pe... [more]
XP_004149962.15.9e-2695.24PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis sativ... [more]
XP_008456089.15.9e-2695.24PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT1G33270.16.6e-1966.67Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3C2I5|A0A1S3C2I5_CUCME3.9e-2695.24Patatin OS=Cucumis melo OX=3656 GN=LOC103496128 PE=3 SV=1[more]
tr|A0A0A0L746|A0A0A0L746_CUCSA3.9e-2695.24Patatin OS=Cucumis sativus OX=3659 GN=Csa_3G214570 PE=3 SV=1[more]
tr|A0A2P2MT82|A0A2P2MT82_RHIMU1.3e-2466.67Patatin OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
tr|A0A2P2MT68|A0A2P2MT68_RHIMU1.3e-2466.67Patatin OS=Rhizophora mucronata OX=61149 PE=3 SV=1[more]
tr|A0A2N9IPN8|A0A2N9IPN8_FAGSY1.8e-2385.71Patatin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54207 PE=3 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg13191-RACarg13191-RAmRNA