Carg13191-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAGTAGAGGTAATGTAACTTCATTCAGCCTAGTTTGCTCTTGACTATCCTGTTCCGATTTTGGGGTTCACTGGAGAACTCAGAGGTTAATCAAAGGATTGTTCATCGTTTCTTTTCTTTTGCCTGTTATCGACACCTTTTGTGTTTTCCGTGGTTTCGATTAAGAAGGATTAGGGCGTTTTAGTAGGTTCATGGCAACGTGGTAAGTTTCAATTTATCCACTGGTTTAGATTTGCAGTTCTTTCTTAAGTCATCTACTGGTTTAGATTTTAATGTTTTCTCATTTAAATCCTCAGGCTGTACTCAGGGAAGTTCTTGAAAAGTTTCTTCCATCAATGCAGTTTTCACTTCTTCCTTTATTCCAGGGTGGGTATTTTAGTTTCACATCCTCTTGAATGTTCTTACTGTTTGTTCCTAGTTGGCTAAATGACTCTGGGCTGAAATAACGCTTTTGTGTAGATACCTAGCGCCAAGACCCGTCACAGTCTTCCGGAATAGACTACTACGCATTGATGGTGGTCTAACATTGTTCATGCCACCTACTTCTGCCTCTCAAACGGTATTTAATTGATAAATTTCTCAATGGTTTTTCGTATTTCAGTCACCCTGAAATTTTGCTTTTGGACGGTGTCGCAGGTGCGTGTATGTGCTTTCCCCGCTACCCGATTGGGCTTTGAAGGGATTGGGATCAGTCCAGACTGCAACCCTGAAAACAGAGCAGGGCCCAGAGAGGTAAATGAGTTCGACAAAGCTCGTCCAACTAGTAGACACATTGTTGTTTTCTCTTTGTAGTTTAGTTTGATCAAACTCTTGCATGTTCTGCATCATATCAGCTTTTCAACTGGGCTGGTGGAAGACGAAAGGCTGGTGGAGGACGCGGTTGTAACTAGCTGAAGCATAAAGTTATGATGGCGAATCAATCTAAATGGAATATGTAGCAGGCTTGGTGGTAAGTGCTTGTCTTAAACCCAAAACTTTCTGGATTGCTGCTGATCTTACTGCCTCAAAATGGTTAGAAACACATATATGAATCCCTTCAACAGAATAGAACAAAAGCCTTCATTCATGAATGTGAAGATAAAAATAATTATACAGGTAGATATCAAAAGTCCTGAGTGTATGATGGCCAAGTACAACATTCTCAGGATTTACATGTGCATTTTGCTGCTATTTTACTACATTCTCAGTACAAGTACAACATTCTTGTATTTTGTTTTCTTCATACAGTATATATATATCATTTCTTTTTCTTTGAACATCTTTCCATCTGAATTGGAAATAAATTGGTTGCATTAGTTTATTGTTTTTTTTTTTTTTTTTTCCTTTTTCCCTTTTGTTGTCCCCAAGTTGGTTGGCTTTGTTTTCGTACAGCTCGCTAAATTTTCTTTCATTTCAATGAAAGCTGTTTTCTTCATTTAAGAAAAAGTATATTGGTTCAGTTTGATTAACTTTTAAACCAAACTGTTGACAGAACTGGTCCATTCAGGCTTGATATGTGATGGCCAAACAAGATGAAAAAAAATAAAGAAACAATGGTGGTTCCGACAACAGAGAGGGGAAGAACAAAGCAATTGCTCTGGATGGGATTTTCGCACCTGCTAGGAATACTGGTATGATTCCAAGCCCAAGGCTGTGAAGTTGAATTTAAGTTTTTGGGAGACGTAGGAAGTAATTGTTGTTTTTGTTTTTATAATTGTTATTTGTTGGCTGTGAAGTGTGTGTTGCTTTAGCTTCTTTTAGATGTTACTCTGTTTTTTGGCACAGGGATTATGTCAGCATTTGACTGCAAGTTCTGGGATGTTTGATTTTGAGATGTTATAGTTTTCAGTATTTGCTTGTCTTTCAATGATAGAACGCCCATATTTCTTACAGTAGTATTCTATTTCCTGAACCCGCACACATCTTTGCATTTAGATTCATTTGAAAGGTCTTTTACCAAGGAATATGGTCTACCTATATATTTAGGATCTTCTCCACTCTTAAACAACATGAACTATGTTCACATTCATAATATTTGAAAGGACATAAGTAAGAAAAAGTAGTACCTAACGGAATGGAACCTCTAAGTTACAACCCTTAAGGAATAAGGTTGATTATGTCAAGGTTTAGTTGGTACAAGGAAGCATTAAGCCCTCATCTTAAACATATAAGGTAACACAAGGATTACTAAGGAAGACTTCTATTTTCAACAAAGGATTTTGAGATGAGAATCAAAAGGAACAAATGCCGGAATAAGTCATAGCCCCAAGACATAGTTAAGAACTAAAGTATGTAAGGACAATTTTAAGGACAAGTCGAAGATGGACAAACCCGTAAAAAAAGACCCTTAGGGAATTTGGAAAGACATAACTAGGAAAAAGGTAGTACACGAAGAACAAAAGCAACCTGTAAGTTACAATATGGTTGATTATGTCAAGGTTTGGTTGGTATAAGGAAGCATTAAGCTCTACCGTGAGATATAAGTTAACTCTAGGATTACATTTATATTCTCGTTAAAGGATGTTGAGATAAGAATCAAACGAAAAAAATGCTGAAATAATCCTTTAGTCTTTTAACTTATGTGTTGAAGCTTGGACTTATTACGACATGTTTTCCTTTTAATTCTCATCTCAACACAAGAATATAAGTCTACCGCGAGATATAAGTTAACTCTAGGATTTCACTTATATTCTCGTTAAAGGATGTTGAGATAAGAATCAAACGAAAAAAATGCTGAAATAATCCTTTAGTCTTTAACTTATGCGTTGAAGCTTGGACTTATTACGACATGTTTTCCTTTTAATTCTCATCTCAACACAAGAATATAAGTCTTCTTGGTAAACTTTGTGTTACCTTGTATCTTTGAGGGTTTCCTTATACCAACTAAGCCTTGACATAATCAACCATATTCATTAATAGTGGTAATTCAATTCTCATCTCAACACAAGAATATTCATTAATAGTGGTAATTCAATTCTCATCACAACACAAGAATATAAGTCTTCTTGGTAAACTTTGTGTTACCTTGTATCTTCGAGGGTTTCCTTATACCAACTAAGCCTTGACATAATCAACCATATTCATTAATAGTGGTAATTCAGAGGTTCTTGAGGGTCTCTTTTTTACGTGTTTCTCCCGTCCTTAAAATTGTCTTTTAGCACATTAGTCCTTAACTTATGTCTTTGGGCAATGGACTTATTCTGCCATTCGCTCCTTTTGATTCTCATCTAACATCCTTCTGTTCAGAAAATAAGTCTTGTTTGGTAAGATGGCTTCCTTATACCAACCAATCCTTTGACATAATCAACCATATTCTTTAATGATTGTAACTGTTCCTCTTGTTCCTTCGTGTACTACATTTTCCTAGTTATGTCTTTCCAAGTTTCTTGAGGCTCTATTTTACGGTTTTGTCCATCTTTGACTTGTCCTTAAAAACGTCATATAATCCTTTAGTCCTTAACTTATGCCTTGGAGGTTGGACATTTTCGGGACTAAAGGAAAAACTGCCGGAATTAGTCCAAGCTCCAAGACAAAATTCTCATTAAGATCTACCCTCAAATATATAAGTTAGTTAACCGAAGGATTAGCAAGGAAGACTTATATTCTCATTAAAGGATGAGACGAGAATCAAAAGAAAAAGAAAAAAATGCCGAAATAATCCTTTAGTCTTCAACTTGTGTTGACATAATCAACCTTATTCCATAAGGGTTGTAACTTAAAGGTTCCTCCTGTTTCTTCATGTACTACATTTTCTTAGTTATGTCTTTCTAAGTTTCTTGACACTCTCTTTTACGGTTTTGTCCATCTTCGACTTGTCCTTAAAAACGTCTTTTAATCATTTAGTCCTTAACTTATGTTTTGGAGGTTAACGCTTATGGCTTCCTTATACCAACTAAGACTTGACATAATAAGGACAAGCTAGAGAAGGACGATTATAAGGACAAGCTAGAGAAGGACAAACTCGTAAAAAAGACCCTTAAGGAACTTGGAACAACATAAAGAAGAAAAAGTAGTTGGGTATAAAGAAGGCAATACGCCCTAAACTCACAGATATAAGGTAACACAAGAATTACTAAGGAAGACTTATATTCTAAATAAAAAGATGTTAAGAAGATAGTCAAAAGGAACAAATGCCAGAATAAGTCCATGGCCTAAAATCATAAGTTAATAACTAAAGGACTTAAGGACAATTATAAGGACAAGCAGAAGAAAGGCAAACCAGGAACATGGAAGGACATAACTCAGAACAAGTAGTACAAGGAGGAACAAAAGGAACCGGTAAGATACAATCTTCAAGGAATAAGATTGATTATGTCAAGGCTTGTTGAGCATAAGGAAGACCGAACGCCCTAAACTCAAAGATATTGAGAAGACAGTCATAAGGCACAAACGTCAAGGCTTGTTGGGTATAAGGAATGTAATACACCCTAAACTCGAGACTTAAGTTAAGGACTAAACGATGTAAGAACGATTATAAGGACAAGCCACAAATGGACAAGCTTGTAAAAAGACCCTCAAAGAATTTGGAAGGACTTAACGAAGAACAAGTAGTACAAAAAAAGAACAAGAGAAACCTCTAAGATTCAACCCTTAAGAAATAATAGAAATTATGATTATTCATAACATAAATAGTTTCTAATAAAATTTGAACTTTTCACGGTTGTGATTATTTAGTTTTTATATTTTATATATTTTAATAGGTCTTCAAACTCTACTTTTGTATTTAA ATGAAAAGTAGAGCGCCAAGACCCGTCACAGTCTTCCGGAATAGACTACTACGCATTGATGGTGGTCTAACATTGTTCATGCCACCTACTTCTGCCTCTCAAACGGTGCGTGTATGTGCTTTCCCCGCTACCCGATTGGGCTTTGAAGGGATTGGGATCAGTCCAGACTGCAACCCTGAAAACAGAGCAGGGCCCAGAGAGTTTAGTTTGATCAAACTCTTGCATGTTCTGCATCATATCAGCTTTTCAACTGGGCTGGTGGAAGACGAAAGGCTGGTGGAGGACGCGGTCTTCAAACTCTACTTTTGTATTTAA ATGAAAAGTAGAGCGCCAAGACCCGTCACAGTCTTCCGGAATAGACTACTACGCATTGATGGTGGTCTAACATTGTTCATGCCACCTACTTCTGCCTCTCAAACGGTGCGTGTATGTGCTTTCCCCGCTACCCGATTGGGCTTTGAAGGGATTGGGATCAGTCCAGACTGCAACCCTGAAAACAGAGCAGGGCCCAGAGAGTTTAGTTTGATCAAACTCTTGCATGTTCTGCATCATATCAGCTTTTCAACTGGGCTGGTGGAAGACGAAAGGCTGGTGGAGGACGCGGTCTTCAAACTCTACTTTTGTATTTAA MKSRAPRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPREFSLIKLLHVLHHISFSTGLVEDERLVEDAVFKLYFCI
BLAST of Carg13191-RA vs. NCBI nr
Match: XP_022988780.1 (uncharacterized protein LOC111486017 [Cucurbita maxima]) HSP 1 Score: 133.3 bits (334), Expect = 4.9e-28 Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of Carg13191-RA vs. NCBI nr
Match: XP_022943045.1 (patatin-like phospholipase domain-containing protein 2 [Cucurbita moschata]) HSP 1 Score: 127.9 bits (320), Expect = 2.0e-26 Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg13191-RA vs. NCBI nr
Match: XP_023513040.1 (patatin-like phospholipase domain-containing protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 127.9 bits (320), Expect = 2.0e-26 Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg13191-RA vs. NCBI nr
Match: XP_004149962.1 (PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis sativus] >KGN57568.1 hypothetical protein Csa_3G214570 [Cucumis sativus]) HSP 1 Score: 126.3 bits (316), Expect = 5.9e-26 Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg13191-RA vs. NCBI nr
Match: XP_008456089.1 (PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis melo]) HSP 1 Score: 126.3 bits (316), Expect = 5.9e-26 Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg13191-RA vs. TAIR10
Match: AT1G33270.1 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein) HSP 1 Score: 90.5 bits (223), Expect = 6.6e-19 Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Carg13191-RA vs. TrEMBL
Match: tr|A0A1S3C2I5|A0A1S3C2I5_CUCME (Patatin OS=Cucumis melo OX=3656 GN=LOC103496128 PE=3 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 3.9e-26 Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg13191-RA vs. TrEMBL
Match: tr|A0A0A0L746|A0A0A0L746_CUCSA (Patatin OS=Cucumis sativus OX=3659 GN=Csa_3G214570 PE=3 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 3.9e-26 Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg13191-RA vs. TrEMBL
Match: tr|A0A2P2MT82|A0A2P2MT82_RHIMU (Patatin OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.3e-24 Identity = 64/96 (66.67%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of Carg13191-RA vs. TrEMBL
Match: tr|A0A2P2MT68|A0A2P2MT68_RHIMU (Patatin OS=Rhizophora mucronata OX=61149 PE=3 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.3e-24 Identity = 64/96 (66.67%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of Carg13191-RA vs. TrEMBL
Match: tr|A0A2N9IPN8|A0A2N9IPN8_FAGSY (Patatin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54207 PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.8e-23 Identity = 54/63 (85.71%), Postives = 58/63 (92.06%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
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