Carg12896 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12896
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Glycoprotein membrane GPI-anchored
Location	Cucurbita_argyrosperma_scaffold_043 : 1031378 .. 1035638 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTGGCCTCCCAGAAACTTGGCTTCTTCCTCTGCAGCCTTGCCCATGTCTTGCTGCTATTGGCAGGCTTAGTGCATTGTGATGGTTATCTCTCTCTCCTCTAGTTCCACAGCACTATACACACACAAACACAAGAGTTTCGAACCTCCTAATCGGGTTCGGTTAGAAATCACGACGCTCCATAATAGTTTGATATTGTCTATTTTGAACATAAATTTTTATGGTTTTGCTTCTAGTTTCGCCGACCAAAAAGCCTAGTATAAATGGAGATAATAGCCTCACTTTGGTCGGCTAATATGGGACTACTTCCCTTAATAATTCTCTCCATCGTGATGGGTCTGTTTGGCTGTCTGTAAACACACAAACAGTTCCATAGTTCCCATATCATTTTCTCAATGCTGCCTCACAAAAGCTTACACCCAATTATATCTATCATTTTGCAGTGAAGGAAGCGCTTTTCAAAGCCATGAACGGGTACAGAGAGTCAAGTAAACTTCCCTCCATGAAGAGGAACCCCAAAGCAGACTGCCTCGTCTCGCAAATGGCTTGGGAATTCGATGACCAGTCGACCATCATCAGCAAGTTCATCAGCGGCTCCACCATCTCTCCAAGCAACCTCACCCAACTACCCAGTCTCCCCGACTACCTATTGCAGTGTAAGATCGAGCTCAACAACACGAAAACGGGTCTGATCTTGCCCCTCTACATCCCCAGCTTGGTGTTGAATCTTGTTCTCGATGGATGTACAGGTTCCCAAATGACCAAGTACTTGAGCAAACCTGAATTCACGTCGGTGGGAATTGGGTATTATCAACAATGGGCAGTGATCGCTTTGGGCACCGATTCGCCCCTCGGAAGCTTTAATTCTGCCGTGAATTTGTCTGATCTGGGCCTTAGATATTTTTACTTCGTGTCGTCCTTGTTGGTAGGGTTGTTTCTTCTCTCTGGTTGAGACCGTTGTGTGCTGGTTTCCATCTGAAACGACATGTCGGCATGGTTAGGAAAATTTGAAGGCGTGGTTGCACAATAATTGACTTCTTTTATTTTTATTAATTATGAAAATGTCCATGATTATCACTTTTTATTTTTTTATTTATTTTTGGATAAGAAAAGCATGCTTAATGGATGCGTTTATGTTTGGCTAGAATTTAGAAAGATTTTAATTGTTTTTTAAGAGTTACAGTAATATTTATATTAAAAAATTGAAATAAAAGACACTAGGTTAAATGTGTTCTTGGAATCTAATTACCAAAAATTAAATAGTTTTAAGAGTTTTTCAACTTTCTTTTTAATAAAATATAAAACAATTCAAAAAAGTCATGAAACATAGTTAATTAAATAAGAATAGTACTAAGTAAAGTTGATATATATAGAAATATAAATGTAGTTTACTGATTAATTAATACACCTATTTTAATTTCTTTTCGAGTAGGAAATTCAAACTTCATTTTCAATTTTATTGTATTTAAAGAAAAGAATCTTCAATTTTGATATCTAACTACTCATCTTCAAATAAATATCTAACCACTCATCTTCTACTAACATATTAGGTATATAAAAAAGTTCCAACATAATTTTTAATGGGTCTTAGATTACAAAATGGGCATCTTTTTATTCTTAAATTTTGAGTTTAGCTTTTAAATCTTAAATTTTTTATATTTTATATTTTACACCTCTCCTCTTAAATAACTGTGACTTTGGGTTAGTTTTTTGTTTTTGGTATTTGGTGTTAATATTTAATAAATTAAATTATTGAAAAGCTAACTCAAATGATTAAAATTGGACATTAGTGAATACTCAAGATAAATGAATAAGATATTAATGTGTATTGACCAAAAAGAAACTAAATTCAACATCGCTACATTTTGAAAGTGAAGTGCAAGTAAAATTTGAAGATCAAACAGAAATAATACTCAAAATCTAAAGCTTAAAAGCTTAAAGATCAAACGTAAATCGTGTAATATTTTGAAATCTAACATCAAACAGAGACAACACTAAAAATCTAAGAATATATCAGAAAACAATACTCAAAATCTAAAGATAAATACTTTGATCCTATTTGACATTGTTAAGGATTGGATAAGTGTTAAATACAAAAGCAAAAGAGAGGGGAAGGAGGTTCGAAAATTGGGATGGAAATGCATGGGAAGAGGGGCAGGTGGAAGAGGTTGGAAGAAGAAACGTGTCTTTTTAGGCTGTCAAAATTGCTCTTCCAAAAGGGCACCTGGAATGGCCACAACAAAACACCAACCCTATCTACACTCTGTTTTCTTTTATAAATAATAATAATTCCCCACACCCTCCAACTCTTCATTCATCCACTTCAACATAATGTCTTCTCCTTCTTACTTTTCTATCTTTGGCGTTTTCGCCATTGCCTTCCTCTTCTTCTCCTCTCCTGTTCTCTCCAAAGGTACTCTCTCTGTCTCTCTGTCTCTCTCCCCCTGCTTCTTCTTTTCCAGTTGTTTCTGTGCTTTGCATGTATATTTGAAACTACATACCTCTACCGTGAAATCTAATTCAAAGAACAGGGGACCAAAATTGGTACTTTTACCTAAATTTTTTTCCCTCGAAATCTTTGGGTTGTTCTTTACCCCACCCATATACATGTTTGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGGGAGGGAAAGGACAAATCCGAGGGTAGAATCTCAAAATGGATGAGTATTATCTCAAAGTCTATGGATGAGTATGATCTCAAAATCAATGGGTAGAATCTCTCACTTCTTTAATTCTTTTTGACTTAAAAACAACCCCCACTTGAGCTATTTGGTTGTTTTTATCCCCCATGTACATATTTGGTTCCTTTTTTTTTTTTTTTTTTTTCGATTGAAGATAAGAGGACAGTTCAAATTTGAAGTGGCTATGTGGTATCAATTATCCTTCCAACATCGATATCGATAGTTGAATCCCAACTCCTAAGCTAGCGTTCTAGGAGAATCAGCCTCTGATTCAACACCTAAGCTAGCGTTCTAGGTGAATCAGCCTCTGATTCAACACCTAAGCTAGCGTTCTAGGAGAATCAGCTTCATTTGAGAGAAAAATTGAAGGCAGATATGACTAAAATATGTCTACTAAGAACTAAATTGAAAAGAAAAAAGAAACAAAATCTTAATGTAGGAAGATTTATTAGAATATTACACAACACCAGGAGGTGGATTTGAACCTCTAAAAAAAACACCATACCTAGGAGATGGATTTGAACTAGAAAGATTTCTTAGTTTAGGAAGATCTCTTAGAATATTACAACATACCTAGGAGGTGGATTTGATCTTGTAAAAAAAGACAAGAATAGGATTTTTGTGGCATATTATCGAATAGCTTTGTGTAACCCAAATTTCTAAGCAGGACAGTTTAATTAACAGATTGTTGTAAATTTGTATAAACATTGTAGAAACGTGCCTAGATAATTGTTTCCTTTTTTAATTTTAAATCATATCTGATTTAAAGAAACTGTTTTCTTAAAATCTGATCATGACTAGAGTTGAATTATGCATATAATTAGCATTTTATTCCAAGGAATTCCCATACTTCCTATGCCTTACCTTGTTCTTTTGCACTTTCTTTTTTTATTTATTTTTCATTTTTGTTAATTCTTACCTCGAGAAAATTTATCATCACCAATTTTTAAGAGATTGAACTAATTAGACAAATAAGAAATCGAAGGCACCTTATTAGTTGTGTAAAAAAGAAAAATACCAATCACCTGATTGCAGATGAAGAAGACAACCTTCTCCAAGGCCTAAACAGCTACCGACAAGCACAGAACCTCCCACCGCTCGCAAAGAACGCAAAAGCCGATTGTATTGCTGAGGAGATCGCGGATGACAACAAAGACCAACCCTGCGCTGTCACCACCGCCAAATCAAACGTGGTGCCAAGCCGCCCGTCGCAGATCACGAAGTTTATGGATTACGCCGAGAAATGCAAGGTGGACATCAACACCACCACGGACGCCATCGTGATGCCAGTATGCGTGCCAAAGCTGGTCCAGACTCTGCTTCTCGCGAATTACACGCACTCGCAGTACGCTAAGTATTTGAACGATTCGAGGTTCGTCGGCGCCGGTGTCGGCTCGGAGGACGACTGGATGGTGGTGGTTCTGACGACCGGAGCATCCGGCGGGAGCTTTGAAGGATCGGGAACGGAGTCGTTGATGGCTTCGGTTTGGGGATGCGTGGCATTGGCTCTGTTAGGGCTTATGATCGGGAATTTTGTGAGATTGTAG

mRNA sequence

ATGGCCTTGGCCTCCCAGAAACTTGGCTTCTTCCTCTGCAGCCTTGCCCATGTCTTGCTGCTATTGGCAGGCTTAGTGCATTGTGATGTGAAGGAAGCGCTTTTCAAAGCCATGAACGGGTACAGAGAGTCAAGTAAACTTCCCTCCATGAAGAGGAACCCCAAAGCAGACTGCCTCGTCTCGCAAATGGCTTGGGAATTCGATGACCAGTCGACCATCATCAGCAAGTTCATCAGCGGCTCCACCATCTCTCCAAGCAACCTCACCCAACTACCCAGTCTCCCCGACTACCTATTGCAGTGTAAGATCGAGCTCAACAACACGAAAACGGGTCTGATCTTGCCCCTCTACATCCCCAGCTTGGTGTTGAATCTTGTTCTCGATGGATGTACAGGTTCCCAAATGACCAAGTACTTGAGCAAACCTGAATTCACGTCGGTGGGAATTGGGTATTATCAACAATGGGCAGTGATCGCTTTGGGCACCGATTCGCCCCTCGGAAGCTTTAATTCTGCCGTGAATTTGTCTGATCTGGGCCTTAGATATTTTTACTTCGTGTCGTCCTTGTTGAAAAATACCAATCACCTGATTGCAGATGAAGAAGACAACCTTCTCCAAGGCCTAAACAGCTACCGACAAGCACAGAACCTCCCACCGCTCGCAAAGAACGCAAAAGCCGATTGTATTGCTGAGGAGATCGCGGATGACAACAAAGACCAACCCTGCGCTGTCACCACCGCCAAATCAAACGTGGTGCCAAGCCGCCCGTCGCAGATCACGAAGTTTATGGATTACGCCGAGAAATGCAAGGTGGACATCAACACCACCACGGACGCCATCGTGATGCCAGTATGCGTGCCAAAGCTGGTCCAGACTCTGCTTCTCGCGAATTACACGCACTCGCAGTACGCTAAGTATTTGAACGATTCGAGGTTCGTCGGCGCCGGTGTCGGCTCGGAGGACGACTGGATGGTGGTGGTTCTGACGACCGGAGCATCCGGCGGGAGCTTTGAAGGATCGGGAACGGAGTCGTTGATGGCTTCGGTTTGGGGATGCGTGGCATTGGCTCTGTTAGGGCTTATGATCGGGAATTTTGTGAGATTGTAG

Coding sequence (CDS)

ATGGCCTTGGCCTCCCAGAAACTTGGCTTCTTCCTCTGCAGCCTTGCCCATGTCTTGCTGCTATTGGCAGGCTTAGTGCATTGTGATGTGAAGGAAGCGCTTTTCAAAGCCATGAACGGGTACAGAGAGTCAAGTAAACTTCCCTCCATGAAGAGGAACCCCAAAGCAGACTGCCTCGTCTCGCAAATGGCTTGGGAATTCGATGACCAGTCGACCATCATCAGCAAGTTCATCAGCGGCTCCACCATCTCTCCAAGCAACCTCACCCAACTACCCAGTCTCCCCGACTACCTATTGCAGTGTAAGATCGAGCTCAACAACACGAAAACGGGTCTGATCTTGCCCCTCTACATCCCCAGCTTGGTGTTGAATCTTGTTCTCGATGGATGTACAGGTTCCCAAATGACCAAGTACTTGAGCAAACCTGAATTCACGTCGGTGGGAATTGGGTATTATCAACAATGGGCAGTGATCGCTTTGGGCACCGATTCGCCCCTCGGAAGCTTTAATTCTGCCGTGAATTTGTCTGATCTGGGCCTTAGATATTTTTACTTCGTGTCGTCCTTGTTGAAAAATACCAATCACCTGATTGCAGATGAAGAAGACAACCTTCTCCAAGGCCTAAACAGCTACCGACAAGCACAGAACCTCCCACCGCTCGCAAAGAACGCAAAAGCCGATTGTATTGCTGAGGAGATCGCGGATGACAACAAAGACCAACCCTGCGCTGTCACCACCGCCAAATCAAACGTGGTGCCAAGCCGCCCGTCGCAGATCACGAAGTTTATGGATTACGCCGAGAAATGCAAGGTGGACATCAACACCACCACGGACGCCATCGTGATGCCAGTATGCGTGCCAAAGCTGGTCCAGACTCTGCTTCTCGCGAATTACACGCACTCGCAGTACGCTAAGTATTTGAACGATTCGAGGTTCGTCGGCGCCGGTGTCGGCTCGGAGGACGACTGGATGGTGGTGGTTCTGACGACCGGAGCATCCGGCGGGAGCTTTGAAGGATCGGGAACGGAGTCGTTGATGGCTTCGGTTTGGGGATGCGTGGCATTGGCTCTGTTAGGGCTTATGATCGGGAATTTTGTGAGATTGTAG

Protein sequence

MALASQKLGFFLCSLAHVLLLLAGLVHCDVKEALFKAMNGYRESSKLPSMKRNPKADCLVSQMAWEFDDQSTIISKFISGSTISPSNLTQLPSLPDYLLQCKIELNNTKTGLILPLYIPSLVLNLVLDGCTGSQMTKYLSKPEFTSVGIGYYQQWAVIALGTDSPLGSFNSAVNLSDLGLRYFYFVSSLLKNTNHLIADEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMIGNFVRL

Homology

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BLAST of Carg12896 vs. NCBI nr
Match: XP_022946761.1 (uncharacterized GPI-anchored protein At3g06035 [Cucurbita moschata] >XP_023545378.1 uncharacterized GPI-anchored protein At3g06035 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.4 bits (864), Expect = 6.0e-89
Identity = 172/185 (92.97%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 184 YFVSSLLKNTNHLIADEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCA 243
           + ++ L  ++  L  DEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCA
Sbjct: 13  FAIAFLFFSSPVLSKDEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCA 72

Query: 244 VTTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQY 303
           VTTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQY
Sbjct: 73  VTTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQY 132

Query: 304 AKYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMIG 363
           AKYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMIG
Sbjct: 133 AKYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMIG 192

Query: 364 NFVRL 369
           NFVRL
Sbjct: 193 NFVRL 197

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BLAST of Carg12896 vs. NCBI nr
Match: XP_022999135.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima])

HSP 1 Score: 328.9 bits (842), Expect = 2.1e-86
Identity = 169/195 (86.67%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 174 NLSDLGLRYFYFVSSLLKNTNHLIADEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEI 233
           +LS   +   + ++ L  ++  L  DEEDNLLQGLNSYRQAQNLPPLAKNAKADCIA+EI
Sbjct: 3   SLSSFSIFGVFAIAFLFFSSPVLSKDEEDNLLQGLNSYRQAQNLPPLAKNAKADCIADEI 62

Query: 234 ADDNKDQPCAVTTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTL 293
           ADDNKDQPCAVTTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTL
Sbjct: 63  ADDNKDQPCAVTTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTL 122

Query: 294 LLANYTHSQYAKYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTESLMASVWGCV 353
           LLANYTHSQYAKYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGT SL+ASVWGCV
Sbjct: 123 LLANYTHSQYAKYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTGSLVASVWGCV 182

Query: 354 ALALLGLMIGNFVRL 369
           ALALLGLMIG+F RL
Sbjct: 183 ALALLGLMIGDFERL 197

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BLAST of Carg12896 vs. NCBI nr
Match: XP_011648805.1 (PREDICTED: uncharacterized GPI-anchored protein At3g06035-like [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 1.9e-71
Identity = 143/198 (72.22%), Postives = 161/198 (81.31%), Query Frame = 0


Query: 170 NSAVNLSDLGLRYFYFVSSLLKNTNHLIADEEDNLLQGLNSYRQAQNLPPLAKNAKADCI 229
           +S+ + S L   +  FV +LL  +  L  DEEDNLLQGLNSYRQAQNLPPL KNAKADC+
Sbjct: 3   SSSSSSSTLFSVFRVFVIALLFFSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCV 62

Query: 230 AEEIADDNKDQPCAVTTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKL 289
           A E+ADD +DQPCAVTT KSNVV SRPSQITKF DYAEKCKVDINTT DA+VMPVCVPKL
Sbjct: 63  ANEMADDAEDQPCAVTTTKSNVVASRPSQITKFPDYAEKCKVDINTTADAVVMPVCVPKL 122

Query: 290 VQTLLLANYTHSQYAKYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTESLMASV 349
           VQTLLL NYTHSQYAKYLNDSRFVGAG+G EDDWMVVVLTTG + GSFEGSG    + S+
Sbjct: 123 VQTLLLTNYTHSQYAKYLNDSRFVGAGLGKEDDWMVVVLTTGTNAGSFEGSGAGPALGSI 182

Query: 350 WGCVALALLGLMIGNFVR 368
           W      L+GL+IG++VR
Sbjct: 183 WVWAVAVLVGLLIGDYVR 200

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BLAST of Carg12896 vs. NCBI nr
Match: KGN60896.1 (hypothetical protein Csa_2G021670 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 1.3e-70
Identity = 136/174 (78.16%), Postives = 150/174 (86.21%), Query Frame = 0


Query: 194 NHLIADEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVP 253
           N +I +EEDNLLQGLNSYRQAQNLPPL KNAKADC+A E+ADD +DQPCAVTT KSNVV 
Sbjct: 2   NLIIDNEEDNLLQGLNSYRQAQNLPPLVKNAKADCVANEMADDAEDQPCAVTTTKSNVVA 61

Query: 254 SRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFV 313
           SRPSQITKF DYAEKCKVDINTT DA+VMPVCVPKLVQTLLL NYTHSQYAKYLNDSRFV
Sbjct: 62  SRPSQITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQTLLLTNYTHSQYAKYLNDSRFV 121

Query: 314 GAGVGSEDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMIGNFVR 368
           GAG+G EDDWMVVVLTTG + GSFEGSG    + S+W      L+GL+IG++VR
Sbjct: 122 GAGLGKEDDWMVVVLTTGTNAGSFEGSGAGPALGSIWVWAVAVLVGLLIGDYVR 175

[Close]

BLAST of Carg12896 vs. NCBI nr
Match: XP_008454814.1 (PREDICTED: uncharacterized GPI-anchored protein At3g06035 [Cucumis melo] >ABR67421.1 GPI-anchored protein-like protein II [Cucumis melo subsp. melo])

HSP 1 Score: 275.4 bits (703), Expect = 2.8e-70
Identity = 140/183 (76.50%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 185 FVSSLLKNTNHLIADEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAV 244
           FV +LL  +  L  DEEDNLLQGLNSYRQAQNLPPL KNAKADCIA E+ADD +DQPCAV
Sbjct: 13  FVIALLFFSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEMADDAEDQPCAV 72

Query: 245 TTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYA 304
           TT KSNVV SRPSQITKF DYAEKCKVDINTT DA+VMPVCVPKLVQTLLL NYTHSQYA
Sbjct: 73  TTTKSNVVASRPSQITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQTLLLTNYTHSQYA 132

Query: 305 KYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMIGN 364
           KYLNDSRFVGAG+G EDDWMVVVLTTG + GSFEG         +WG   L L+GL+IG+
Sbjct: 133 KYLNDSRFVGAGLGKEDDWMVVVLTTGTNAGSFEGXXXXXXXXXIWGWAVLVLVGLLIGD 192

Query: 365 FVR 368
            VR
Sbjct: 193 IVR 195

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BLAST of Carg12896 vs. TAIR10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 180.6 bits (457), Expect = 1.7e-45
Identity = 92/167 (55.09%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 201 EDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVP-SRPSQI 260
           EDNLLQGLNSYR AQ +PP AKN KADC+A+EIAD  +DQPC   T  S V P S P ++
Sbjct: 32  EDNLLQGLNSYRTAQRVPPFAKNEKADCVADEIADKLEDQPCTNHTTASTVTPGSVPPRL 91

Query: 261 TKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGVGS 320
           T + D   +CK+D NTT D +++PVC+P  + TL L NYT + YA+YLNDSR+VGAGVGS
Sbjct: 92  TNYQDILSECKIDPNTTRDGLILPVCIPNRIPTLALTNYTQTGYARYLNDSRYVGAGVGS 151

Query: 321 EDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMIGNFV 367
           E +WMVVVLTT   GGSF          SV     L L+GL+    V
Sbjct: 152 EKEWMVVVLTTSTPGGSFTAGVAAGKATSVRVMAGLGLMGLLFSCLV 198

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BLAST of Carg12896 vs. TAIR10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 139.0 bits (349), Expect = 5.7e-33
Identity = 69/139 (49.64%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 199 DEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVPSRPSQ 258
           DEED LL G+NSYR  QNL  L+KN  A+C+A+EIAD  K++PC   T  S  VP    Q
Sbjct: 27  DEEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKPCTNDTG-SATVPGTEPQ 86

Query: 259 ITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGVG 318
              +     KC ++++ T D  +MP CVP+L   L+L N+T SQY+  LNDS+F G G+G
Sbjct: 87  FANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSLNDSKFTGIGIG 146

Query: 319 SEDDWMVVVLTTGASGGSF 338
            EDDW+VVVLTT    GS+
Sbjct: 147 KEDDWIVVVLTTNTPEGSY 164

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BLAST of Carg12896 vs. TAIR10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-31
Identity = 74/170 (43.53%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 198 ADEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVPSRPS 257
           ADEED LL G+NSYR + NL  L  N  A+C+A+EIAD  K+QPC  TT  ++V  + P 
Sbjct: 27  ADEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQPCTNTTGSASVPGTTPG 86

Query: 258 QITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGV 317
                 +   KC+++   T D  ++P CVP L  +L+L N+T SQY+K LNDS+F G G+
Sbjct: 87  -FPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSKDLNDSKFTGIGI 146

Query: 318 GSEDDWMVVVLTTGASGGSFEGSGTESLMA-SVWGCVALALLGLMIGNFV 367
           GS+D+W+VVVLTT    GS+  +      A  V G V+ +L+ L+   F+
Sbjct: 147 GSDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSLMFLLFCFFM 195

[Close]

BLAST of Carg12896 vs. TAIR10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 104.0 bits (258), Expect = 2.0e-22
Identity = 64/166 (38.55%), Postives = 95/166 (57.23%), Query Frame = 0


Query: 199 DEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVPSRPSQ 258
           D E+ L    N YR++ NL  L KN  A+C+A+E+ D  ++QPC  TT  ++ VP     
Sbjct: 28  DGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPCTNTTGSAS-VPGTDPG 87

Query: 259 ITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGVG 318
           I  F +   KC+++ N T D +++ VC PK   T  L+++  +   K LNDS+F GAGVG
Sbjct: 88  IPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFA-NVLTKNLNDSKFTGAGVG 147

Query: 319 SEDD--WMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMI 363
            + D  W+V VLTT   GGS+  SG  +    V G V+ +L+ L +
Sbjct: 148 IDSDGIWLVTVLTTNTPGGSYSNSG--AFAFGVNGLVSSSLMFLHV 189

[Close]

BLAST of Carg12896 vs. TAIR10
Match: AT5G19230.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 89.7 bits (221), Expect = 4.0e-18
Identity = 61/169 (36.09%), Postives = 85/169 (50.30%), Query Frame = 0


Query: 200 EEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVPSRPSQI 259
           E+D LL   N YR   NL  L KN  A+C+A+E+ D  K+QPC   T  S  VP      
Sbjct: 29  EDDLLLTVFNKYRTGLNLKTLTKNENAECLADEVVDQLKNQPC-TNTNNSAPVPGN---- 88

Query: 260 TKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGVGS 319
               +   KC ++     D ++M VC PK  +   L+N+ +S   K LNDS+  G G+GS
Sbjct: 89  ----NLLAKCSLNTTVVRDGVIMQVCFPKHDKNPDLSNF-NSVVLKNLNDSKITGIGIGS 148

Query: 320 EDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMIGNFVRL 369
            D W+VV+LTT    G     G   L  +  G  A  + GL+  +F+ L
Sbjct: 149 GDIWVVVILTTNTPEG-----GYSLLTTTNSGAYAFGVNGLVSSSFLFL 182

[Close]

BLAST of Carg12896 vs. Swiss-Prot
Match: sp|Q84MC0|UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.0e-31
Identity = 69/139 (49.64%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 199 DEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVPSRPSQ 258
           DEED LL G+NSYR  QNL  L+KN  A+C+A+EIAD  K++PC   T  S  VP    Q
Sbjct: 27  DEEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKPCTNDTG-SATVPGTEPQ 86

Query: 259 ITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGVG 318
              +     KC ++++ T D  +MP CVP+L   L+L N+T SQY+  LNDS+F G G+G
Sbjct: 87  FANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSLNDSKFTGIGIG 146

Query: 319 SEDDWMVVVLTTGASGGSF 338
            EDDW+VVVLTT    GS+
Sbjct: 147 KEDDWIVVVLTTNTPEGSY 164

[Close]

BLAST of Carg12896 vs. Swiss-Prot
Match: sp|P59833|UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.5e-30
Identity = 74/170 (43.53%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 198 ADEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVPSRPS 257
           ADEED LL G+NSYR + NL  L  N  A+C+A+EIAD  K+QPC  TT  ++V  + P 
Sbjct: 27  ADEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQPCTNTTGSASVPGTTPG 86

Query: 258 QITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGV 317
                 +   KC+++   T D  ++P CVP L  +L+L N+T SQY+K LNDS+F G G+
Sbjct: 87  -FPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSKDLNDSKFTGIGI 146

Query: 318 GSEDDWMVVVLTTGASGGSFEGSGTESLMA-SVWGCVALALLGLMIGNFV 367
           GS+D+W+VVVLTT    GS+  +      A  V G V+ +L+ L+   F+
Sbjct: 147 GSDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSLMFLLFCFFM 195

[Close]

BLAST of Carg12896 vs. Swiss-Prot
Match: sp|Q84VZ5|UGPI2_ARATH (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 GN=At5g19240 PE=2 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 3.7e-21
Identity = 64/166 (38.55%), Postives = 95/166 (57.23%), Query Frame = 0


Query: 199 DEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVPSRPSQ 258
           D E+ L    N YR++ NL  L KN  A+C+A+E+ D  ++QPC  TT  ++ VP     
Sbjct: 28  DGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPCTNTTGSAS-VPGTDPG 87

Query: 259 ITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGVG 318
           I  F +   KC+++ N T D +++ VC PK   T  L+++  +   K LNDS+F GAGVG
Sbjct: 88  IPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFA-NVLTKNLNDSKFTGAGVG 147

Query: 319 SEDD--WMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMI 363
            + D  W+V VLTT   GGS+  SG  +    V G V+ +L+ L +
Sbjct: 148 IDSDGIWLVTVLTTNTPGGSYSNSG--AFAFGVNGLVSSSLMFLHV 189

[Close]

BLAST of Carg12896 vs. Swiss-Prot
Match: sp|Q8GUL8|UGPI1_ARATH (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 GN=At5g19230 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.1e-17
Identity = 61/169 (36.09%), Postives = 85/169 (50.30%), Query Frame = 0


Query: 200 EEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVPSRPSQI 259
           E+D LL   N YR   NL  L KN  A+C+A+E+ D  K+QPC   T  S  VP      
Sbjct: 29  EDDLLLTVFNKYRTGLNLKTLTKNENAECLADEVVDQLKNQPC-TNTNNSAPVPGN---- 88

Query: 260 TKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGVGS 319
               +   KC ++     D ++M VC PK  +   L+N+ +S   K LNDS+  G G+GS
Sbjct: 89  ----NLLAKCSLNTTVVRDGVIMQVCFPKHDKNPDLSNF-NSVVLKNLNDSKITGIGIGS 148

Query: 320 EDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMIGNFVRL 369
            D W+VV+LTT    G     G   L  +  G  A  + GL+  +F+ L
Sbjct: 149 GDIWVVVILTTNTPEG-----GYSLLTTTNSGAYAFGVNGLVSSSFLFL 182

[Close]

BLAST of Carg12896 vs. TrEMBL
Match: tr|A0A0A0LLP1|A0A0A0LLP1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021670 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.3e-71
Identity = 136/174 (78.16%), Postives = 150/174 (86.21%), Query Frame = 0


Query: 194 NHLIADEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVP 253
           N +I +EEDNLLQGLNSYRQAQNLPPL KNAKADC+A E+ADD +DQPCAVTT KSNVV 
Sbjct: 2   NLIIDNEEDNLLQGLNSYRQAQNLPPLVKNAKADCVANEMADDAEDQPCAVTTTKSNVVA 61

Query: 254 SRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFV 313
           SRPSQITKF DYAEKCKVDINTT DA+VMPVCVPKLVQTLLL NYTHSQYAKYLNDSRFV
Sbjct: 62  SRPSQITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQTLLLTNYTHSQYAKYLNDSRFV 121

Query: 314 GAGVGSEDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMIGNFVR 368
           GAG+G EDDWMVVVLTTG + GSFEGSG    + S+W      L+GL+IG++VR
Sbjct: 122 GAGLGKEDDWMVVVLTTGTNAGSFEGSGAGPALGSIWVWAVAVLVGLLIGDYVR 175

[Close]

BLAST of Carg12896 vs. TrEMBL
Match: tr|A0A1S3C074|A0A1S3C074_CUCME (uncharacterized GPI-anchored protein At3g06035 OS=Cucumis melo OX=3656 GN=LOC103495124 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.9e-70
Identity = 140/183 (76.50%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 185 FVSSLLKNTNHLIADEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAV 244
           FV +LL  +  L  DEEDNLLQGLNSYRQAQNLPPL KNAKADCIA E+ADD +DQPCAV
Sbjct: 13  FVIALLFFSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEMADDAEDQPCAV 72

Query: 245 TTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYA 304
           TT KSNVV SRPSQITKF DYAEKCKVDINTT DA+VMPVCVPKLVQTLLL NYTHSQYA
Sbjct: 73  TTTKSNVVASRPSQITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQTLLLTNYTHSQYA 132

Query: 305 KYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMIGN 364
           KYLNDSRFVGAG+G EDDWMVVVLTTG + GSFEG         +WG   L L+GL+IG+
Sbjct: 133 KYLNDSRFVGAGLGKEDDWMVVVLTTGTNAGSFEGXXXXXXXXXIWGWAVLVLVGLLIGD 192

Query: 365 FVR 368
            VR
Sbjct: 193 IVR 195

[Close]

BLAST of Carg12896 vs. TrEMBL
Match: tr|A6YTC7|A6YTC7_CUCME (GPI-anchored protein-like protein II OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.9e-70
Identity = 140/183 (76.50%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 185 FVSSLLKNTNHLIADEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAV 244
           FV +LL  +  L  DEEDNLLQGLNSYRQAQNLPPL KNAKADCIA E+ADD +DQPCAV
Sbjct: 13  FVIALLFFSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEMADDAEDQPCAV 72

Query: 245 TTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYA 304
           TT KSNVV SRPSQITKF DYAEKCKVDINTT DA+VMPVCVPKLVQTLLL NYTHSQYA
Sbjct: 73  TTTKSNVVASRPSQITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQTLLLTNYTHSQYA 132

Query: 305 KYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGLMIGN 364
           KYLNDSRFVGAG+G EDDWMVVVLTTG + GSFEG         +WG   L L+GL+IG+
Sbjct: 133 KYLNDSRFVGAGLGKEDDWMVVVLTTGTNAGSFEGXXXXXXXXXIWGWAVLVLVGLLIGD 192

Query: 365 FVR 368
            VR
Sbjct: 193 IVR 195

[Close]

BLAST of Carg12896 vs. TrEMBL
Match: tr|A6YTC6|A6YTC6_CUCME (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 6.2e-66
Identity = 135/191 (70.68%), Postives = 149/191 (78.01%), Query Frame = 0


Query: 1   MALASQKLGFFLCSLAHVLLLLAGLVHCDVKE-ALFKAMNGYRESSKLPSMKRNPKADCL 60
           MA  + KLG +LC LAH LLLLA LVHCDV E  LFKAMN YR S +L  M RN KADC 
Sbjct: 209 MAFTTPKLGLYLCGLAHGLLLLASLVHCDVNEDTLFKAMNIYRSSKELTPMNRNSKADCF 268

Query: 61  VSQMAWEFDDQSTIISKFISGSTISPSNLTQLPSLPDYLLQCKIELNNTKTGLILPLYIP 120
           V Q+AW+FDDQ   +S F SGS I+PSNLTQLP+LPDYL +C IELNNTK GLILPL+IP
Sbjct: 269 VKQIAWDFDDQLP-LSIFTSGSNITPSNLTQLPNLPDYLTRCNIELNNTKNGLILPLHIP 328

Query: 121 SLVLNLVLDGCTGSQMTKYLSKPEFTSVGIGYYQQWAVIALGTDSPLGSFNSAVNLSDLG 180
           +LV NLVL GCT SQM  YLSKPEFTS+GIG Y+QWAV A  TDSP GSFNSAV LS LG
Sbjct: 329 TLVSNLVLHGCTHSQMANYLSKPEFTSIGIGCYEQWAVFAFATDSPTGSFNSAVTLSKLG 388

Query: 181 LRYFYFVSSLL 191
           L +FY VSSLL
Sbjct: 389 LHHFYLVSSLL 398

[Close]

BLAST of Carg12896 vs. TrEMBL
Match: tr|A0A2P5B577|A0A2P5B577_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_332420 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 8.4e-63
Identity = 143/362 (39.50%), Postives = 209/362 (57.73%), Query Frame = 0


Query: 3   LASQKLGFFLCSLAHVLLLLAGLV-HCDVKEALFKAMNGYRESSKLPSMKRNPKADCLVS 62
           +AS KL  F   L HV LLL  +V   D ++ L + +N YR+S +LP + +N KADCL  
Sbjct: 1   MASFKLSCFFV-LVHVSLLLPNMVLSNDDEDTLLQGINSYRQSLRLPQLAKNGKADCLAD 60

Query: 63  QMAWEFDDQSTIISKFISGSTISPSNLTQLPSLPDYLLQCKIELNNTKTGLILPLYIPSL 122
           +     +DQ    +   +G+ I PS  TQL   P  L +C I++N T  G+ILP+ +P L
Sbjct: 61  EXXXXXEDQP--CTTLTTGANIVPSTQTQLSDYPKLLKKCGIDVNTTTDGVILPVCVPKL 120

Query: 123 VLNLVLDGCTGSQMTKYLSKPEFTSVGIGYYQQWAVIALGTDSPLGSFNSAVNL-SDLGL 182
           V  LVL   T +   +YL+  ++T  G+G    W V+ L T +  GSF+ AV+L S +G 
Sbjct: 121 VPTLVLTNYTHTSYARYLNNSKYTGAGVGSEDDWMVVVLSTSTTAGSFSRAVSLVSQMGF 180

Query: 183 RYFYFVSSLLKNTNHLIADEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQ 242
                             ++ED L QG+N+YR++ N+  L KN KADC+A+EIADD +D 
Sbjct: 181 ------------------EKEDGLFQGINNYRKSLNVSELKKNEKADCLADEIADDLEDY 240

Query: 243 PCAVTTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTH 302
           PC+     +        ++  F   A+KC +D+NTT D+I++PVCVPKLV  L+L N+T 
Sbjct: 241 PCSGAEEFAGDPAITVPRLVNFPKLAKKCDIDVNTTMDSIILPVCVPKLVTELVLNNFTK 300

Query: 303 SQYAKYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGL 362
           S Y K+LN+S+F GAGVGSEDDW+VVVL T    GS  G+    +   +   + ++ LG+
Sbjct: 301 SPYTKFLNNSKFTGAGVGSEDDWIVVVLATDKPSGSVSGAAASLVAFGMVQSLVVSFLGV 341

The following BLAST results are available for this feature:

BLAST of Carg12896 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946761.1	6.0e-89	92.97	uncharacterized GPI-anchored protein At3g06035 [Cucurbita moschata] >XP_02354537...	[more]
XP_022999135.1	2.1e-86	86.67	uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima]	[more]
XP_011648805.1	1.9e-71	72.22	PREDICTED: uncharacterized GPI-anchored protein At3g06035-like [Cucumis sativus]	[more]
KGN60896.1	1.3e-70	78.16	hypothetical protein Csa_2G021670 [Cucumis sativus]	[more]
XP_008454814.1	2.8e-70	76.50	PREDICTED: uncharacterized GPI-anchored protein At3g06035 [Cucumis melo] >ABR674...	[more]

BLAST of Carg12896 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54860.1	1.7e-45	55.09	Glycoprotein membrane precursor GPI-anchored	[more]
AT3G06035.1	5.7e-33	49.64	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19250.1	1.4e-31	43.53	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19240.1	2.0e-22	38.55	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19230.1	4.0e-18	36.09	Glycoprotein membrane precursor GPI-anchored	[more]

BLAST of Carg12896 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84MC0\|UGPI4_ARATH	1.0e-31	49.64	Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|P59833\|UGPI3_ARATH	2.5e-30	43.53	Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q84VZ5\|UGPI2_ARATH	3.7e-21	38.55	Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q8GUL8\|UGPI1_ARATH	7.1e-17	36.09	Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Carg12896 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LLP1\|A0A0A0LLP1_CUCSA	8.3e-71	78.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021670 PE=4 SV=1	[more]
tr\|A0A1S3C074\|A0A1S3C074_CUCME	1.9e-70	76.50	uncharacterized GPI-anchored protein At3g06035 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A6YTC7\|A6YTC7_CUCME	1.9e-70	76.50	GPI-anchored protein-like protein II OS=Cucumis melo subsp. melo OX=412675 PE=4 ...	[more]
tr\|A6YTC6\|A6YTC6_CUCME	6.2e-66	70.68	GPI-anchored protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=...	[more]
tr\|A0A2P5B577\|A0A2P5B577_9ROSA	8.4e-63	39.50	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_332420 PE=4 S...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12896-RA	Carg12896-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33976	FAMILY NOT NAMED	coord: 4..174 coord: 185..363
None	No IPR available	PRODOM	PD208950		coord: 201..366 e-value: 1.0E-43 score: 447.0 coord: 31..173 e-value: 1.0E-19 score: 240.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12896	Cla019882	Watermelon (97103) v1	carwmB0907
Carg12896	Csa2G021640	Cucumber (Chinese Long) v2	carcuB0917
Carg12896	MELO3C004276	Melon (DHL92) v3.5.1	carmeB0893
Carg12896	ClCG02G015890	Watermelon (Charleston Gray)	carwcgB0883
Carg12896	CSPI02G03830	Wild cucumber (PI 183967)	carcpiB0938
Carg12896	Cucsa.091570	Cucumber (Gy14) v1	carcgyB1020
Carg12896	CmaCh05G011460	Cucurbita maxima (Rimu)	carcmaB1246
Carg12896	CmaCh12G010780	Cucurbita maxima (Rimu)	carcmaB1241
Carg12896	CmoCh05G011570	Cucurbita moschata (Rifu)	carcmoB1216
Carg12896	CmoCh12G010940	Cucurbita moschata (Rifu)	carcmoB1212
Carg12896	Lsi11G005320	Bottle gourd (USVL1VR-Ls)	carlsiB822
Carg12896	Cp4.1LG11g09470	Cucurbita pepo (Zucchini)	carcpeB1252
Carg12896	Cp4.1LG07g09190	Cucurbita pepo (Zucchini)	carcpeB1256
Carg12896	CsGy2G003920	Cucumber (Gy14) v2	carcgybB0890
Carg12896	MELO3C004276.2	Melon (DHL92) v3.6.1	carmedB0900
Carg12896	CsaV3_2G005150	Cucumber (Chinese Long) v3	carcucB0940
Carg12896	Cla97C02G041640	Watermelon (97103) v2	carwmbB0946
Carg12896	Bhi05G001650	Wax gourd	carwgoB1046

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12896	Carg17550	Silver-seed gourd	carcarB587

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12896	Watermelon (97103) v2	carwmbB0949