ClCG02G015890 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G015890
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	GPI-anchored protein-like protein II
Location	CG_Chr02 : 30287716 .. 30290486 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCTTCTTCTTTCTTTTCTTTCTTTCCTGTTTTTGCCATTGCCTTCCTCTTCTTCTCCTCTCCTGTTCTCTCTAAAGGTATTCTCTTTTTCTATTTTCTCATGCCTTTATGTGCCGTTTATTTTTTCAGAATCTAGATAACTCAAATCTGTTACAACAATTGTGATCCATGAATTTTCTTTTCTGCTAGAGGGATACCATGTTCTCTTATTTATCTCACACTTTGCTCACTTGTAGTGAGATTTTGGGATGGTTTTGCAACCATAGGTCTCCATCTCAAAGAGTCTGGGTTACCAAACAAATCTAATCTAGATTACAAATTAGCCTTCTTGTGGAACATCTATCTAATGGGCATAAATTGATCTTGGACTATGTGTAAGATCCCAGGGCCCTAAATCATCTTCTAAGACACTTCTTAAATAATAAGAAAACTAACAGGAAGAATTTGGATTATTTTTTAACAAAATCTTCAAATGTTCGAAAATATAGATACTTGATAGTTCAAACTTACTGTATTTGTATGGGAATATGGGGGATGTCGCTATGCCTTTTATTAATTTTTAAGTATTTTACTTATTTAGTCTAATATAATTTAAATTTATAATTTCATTTTTTTGGTATATTTCTATATCAATTTTAGTTTATATAACTTCAATTTATATACCATTTGAGGTTTTTATAATATTATTAAATATTAATTCAATTTATATTTTATTTTGAGGTTTTAGTGCGCATATATATATATATATATATATATATATATATATAAATGTGAAATAAAGAAAATGGTCAGAAAAAAGTAGAAGAAAAGAAACATGTTTGGCAAAAATCTCATTAGAGGATGTGTTCTACAGAGGAATCATAGAAACCCATCATTCAAAAGGCATCCAAAATTGGTTATACGCTTACTAAGATGTCCTGTTTTCTTAAAATGTCTAGATATCTTATATTCAATTCAAATACTCATCCAACGAAAAATCTTAGATATAAATGCCCCCTTAAAGTTGGCTTACATAGGACTAAAATGGTATAGAAAAATAAATAAATAAATAAATAGGGACCAATATGGTTTTTCTAACAACCTGTTCTATTTTTTCCCCCTTGATTTGAGGGAAAAGGACAATTTAATGCAAGGAAATTTGCTGTAGGATAATCTTTTAAATAGGGTGGGATCCATCCACATTTTTGTGGCTTTCACAAATATTTGTGAAAGCAAATATATGGTGAACAAGGGAGTACTATTTTAGTACTAGAAGAATTCCTAATCCTACACTATTTTGGACCATCCACATATTTGTGGCCTCTAGTACTGGAAAAATTCCAGTTTGCAGTTTGGAATTTATATAGGGATAAAAATATAACGCCTATTTAAAAATAGGGTCCATCCATATTTATGTGGGGTCTAGGAAGGCAGGCAAATTTATAGTGAACAAGAGAGTGAAATTCCTAATGGCTCTAGCTTTTCCCGATGCTTAAGTTGGCGCCAGTTTGGAATTTATATAAGGGAAAAAATATAAATTTTTTAAAAAAGAATTAATTGGTTCCAATTCTAAGCTTTTGTTTAATAGATTTTCAAGATATCAATTTTGCCTCCGAGCCTAAAATTTAAAAAAAAAAAAAAAAAACGTTATAAACTATTGAATTTAACTGTGTCTGTCACAGATATTATTATCATTAGATATTTTTTAAATTTTACCTATTAAATATAAATTTGAAACTTTAAGATTTAATACGGCAAATAATTTTTGTTTTGTGTAATATAATGGTCAATGTTTAAATATTTCTAACGTTTTCTAAATTTAGTAGATTTAAAATGGAAGGTCAAACGATTTTCTGTTTTGTGTAACAGAATGGTTGATGTTCAAATATTTTTCATGTTTTTGAAATTTATTAAATTTAAGGATTTATTAGTAACAACTTGTAAAATAAGTTTTAAAAATTAAAATAATAAAAGAAAAAGACAAAAAAAATTATATATATAAAGGCCACTTAATAGTTGTAGGGTTTTTTAAGGGATAACTATGTAATTATTTCTTTTAATTCTATTAAAATTAACAACATTTTTATATTCAGTTAAAAACAATATACATTTATATACAATGTGACCAATTTGCCAAAGATCCCCACTCCACGGAATCTTAATTTAGGAAGATTTCGTATAATATTAATTACACCATACTAAGTGGTTGAAATATAATATTGTGGTTTTTTTTTTTTTTTTTTTTTTTTTGGTGTCACCAATTACCTGATTGCAGATGAAGAAGACAACCTTCTCCAAGGCTTAAACAGCTACCGACAAGCACAGAACCTCCCGCCACTCGTAAAGAACGCAAAAGCCGACTGCATAGCAAACGAGGTCGCGGACGATGCCGAAGACCAACCCTGTGCTGTCACCACCGCCAAATCAAACGTCGTTGCAAGCCGCCCGTCGCAGATCACGAAGTTCCCGCATTACGCCGAGAAATGCAAGGTGGACATCAACACCACCTCTGACGCCGTCGTGATGCCGGTGTGCGTGCCGAAGATGGTACAGACTCTGCTGCTCGCGAACTACACGCACTCACAGTACGCGAAGTATTTGAACGATTCGAGGTTCGTCGGCGCCGGACTCGGCAAGGAGGACGACTGGATGGTGGTGATTCTGACTACCGGATCGCCCGTCGGGAGGTTTGAAGGATCGGGGGCTGGGTCGTTGGTGGTTTCGATTTGGGGATGGGTGGTGTTGGTTCTGTTAGGGTTTCTGATTGGCGATTTTGTGAGATTGTGA

mRNA sequence

ATGCCTTCTTCTTCTTTCTTTTCTTTCTTTCCTGTTTTTGCCATTGCCTTCCTCTTCTTCTCCTCTCCTGTTCTCTCTAAAGATGAAGAAGACAACCTTCTCCAAGGCTTAAACAGCTACCGACAAGCACAGAACCTCCCGCCACTCGTAAAGAACGCAAAAGCCGACTGCATAGCAAACGAGGTCGCGGACGATGCCGAAGACCAACCCTGTGCTGTCACCACCGCCAAATCAAACGTCGTTGCAAGCCGCCCGTCGCAGATCACGAAGTTCCCGCATTACGCCGAGAAATGCAAGGTGGACATCAACACCACCTCTGACGCCGTCGTGATGCCGGTGTGCGTGCCGAAGATGGTACAGACTCTGCTGCTCGCGAACTACACGCACTCACAGTACGCGAAGTATTTGAACGATTCGAGGTTCGTCGGCGCCGGACTCGGCAAGGAGGACGACTGGATGGTGGTGATTCTGACTACCGGATCGCCCGTCGGGAGGTTTGAAGGATCGGGGGCTGGGTCGTTGGTGGTTTCGATTTGGGGATGGGTGGTGTTGGTTCTGTTAGGGTTTCTGATTGGCGATTTTGTGAGATTGTGA

Coding sequence (CDS)

ATGCCTTCTTCTTCTTTCTTTTCTTTCTTTCCTGTTTTTGCCATTGCCTTCCTCTTCTTCTCCTCTCCTGTTCTCTCTAAAGATGAAGAAGACAACCTTCTCCAAGGCTTAAACAGCTACCGACAAGCACAGAACCTCCCGCCACTCGTAAAGAACGCAAAAGCCGACTGCATAGCAAACGAGGTCGCGGACGATGCCGAAGACCAACCCTGTGCTGTCACCACCGCCAAATCAAACGTCGTTGCAAGCCGCCCGTCGCAGATCACGAAGTTCCCGCATTACGCCGAGAAATGCAAGGTGGACATCAACACCACCTCTGACGCCGTCGTGATGCCGGTGTGCGTGCCGAAGATGGTACAGACTCTGCTGCTCGCGAACTACACGCACTCACAGTACGCGAAGTATTTGAACGATTCGAGGTTCGTCGGCGCCGGACTCGGCAAGGAGGACGACTGGATGGTGGTGATTCTGACTACCGGATCGCCCGTCGGGAGGTTTGAAGGATCGGGGGCTGGGTCGTTGGTGGTTTCGATTTGGGGATGGGTGGTGTTGGTTCTGTTAGGGTTTCTGATTGGCGATTTTGTGAGATTGTGA

Protein sequence

MPSSSFFSFFPVFAIAFLFFSSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEVADDAEDQPCAVTTAKSNVVASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLANYTHSQYAKYLNDSRFVGAGLGKEDDWMVVILTTGSPVGRFEGSGAGSLVVSIWGWVVLVLLGFLIGDFVRL

Homology

[Close]

BLAST of ClCG02G015890 vs. Swiss-Prot
Match: UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana GN=At3g06035 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.1e-35
Identity = 72/156 (46.15%), Postives = 99/156 (63.46%), Query Frame = 1


Query: 12  VFAIAFLFFSSPVLSK-DEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEVADDAEDQP 71
           +F    L  + PVLS  DEED LL G+NSYR  QNL  L KN  A+C+A+E+AD  +++P
Sbjct: 10  LFLSILLCLNRPVLSDTDEEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKP 69

Query: 72  CAVTTAKSNVVASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLANYTHS 131
           C   T  + V  + P Q   +P    KC ++++ T D  +MP CVP++   L+L N+T S
Sbjct: 70  CTNDTGSATVPGTEP-QFANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKS 129

Query: 132 QYAKYLNDSRFVGAGLGKEDDWMVVILTTGSPVGRF 167
           QY+  LNDS+F G G+GKEDDW+VV+LTT +P G +
Sbjct: 130 QYSMSLNDSKFTGIGIGKEDDWIVVVLTTNTPEGSY 164

[Close]

BLAST of ClCG02G015890 vs. Swiss-Prot
Match: UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana GN=At5g19250 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.3e-33
Identity = 74/182 (40.66%), Postives = 108/182 (59.34%), Query Frame = 1


Query: 17  FLFFSSPVLSK--DEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEVADDAEDQPCAVT 76
           FL     VLS   DEED LL G+NSYR + NL  L+ N  A+C+A+E+AD  ++QPC  T
Sbjct: 15  FLSLHPLVLSDTADEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQPCTNT 74

Query: 77  TAKSNVVASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLANYTHSQYAK 136
           T  ++V  + P      P+   KC+++   T D  ++P CVP +  +L+L N+T SQY+K
Sbjct: 75  TGSASVPGTTPG-FPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSK 134

Query: 137 YLNDSRFVGAGLGKEDDWMVVILTTGSPVGRFE-GSGAGSLVVSIWGWVVLVLLGFLIGD 196
            LNDS+F G G+G +D+W+VV+LTT +P G +   S +G+    + G V   L+  L   
Sbjct: 135 DLNDSKFTGIGIGSDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSLMFLLFCF 194

[Close]

BLAST of ClCG02G015890 vs. Swiss-Prot
Match: UGPI2_ARATH (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana GN=At5g19240 PE=2 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 3.4e-26
Identity = 65/158 (41.14%), Postives = 94/158 (59.49%), Query Frame = 1


Query: 17  FLFFSSPVLSKDEEDNLLQGL-NSYRQAQNLPPLVKNAKADCIANEVADDAEDQPCAVTT 76
           FL    PVLS  + +NLL  + N YR++ NL  L KN  A+C+A+EV D  ++QPC  TT
Sbjct: 16  FLSLHRPVLSNTDGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPCTNTT 75

Query: 77  AKSNVVASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLANYTHSQYAKY 136
             ++V  + P  I  FP+   KC+++ N T D +++ VC PK   T  L+++  +   K 
Sbjct: 76  GSASVPGTDPG-IPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFA-NVLTKN 135

Query: 137 LNDSRFVGAGLGKEDD--WMVVILTTGSPVGRFEGSGA 172
           LNDS+F GAG+G + D  W+V +LTT +P G +  SGA
Sbjct: 136 LNDSKFTGAGVGIDSDGIWLVTVLTTNTPGGSYSNSGA 171

[Close]

BLAST of ClCG02G015890 vs. Swiss-Prot
Match: UGPI1_ARATH (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana GN=At5g19230 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-18
Identity = 53/138 (38.41%), Postives = 72/138 (52.17%), Query Frame = 1


Query: 29  EEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEVADDAEDQPCAVTTAKSNVVASRPSQI 88
           E+D LL   N YR   NL  L KN  A+C+A+EV D  ++QPC  T   + V  +     
Sbjct: 29  EDDLLLTVFNKYRTGLNLKTLTKNENAECLADEVVDQLKNQPCTNTNNSAPVPGN----- 88

Query: 89  TKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLANYTHSQYAKYLNDSRFVGAGLGK 148
               +   KC ++     D V+M VC PK  +   L+N+ +S   K LNDS+  G G+G 
Sbjct: 89  ----NLLAKCSLNTTVVRDGVIMQVCFPKHDKNPDLSNF-NSVVLKNLNDSKITGIGIGS 148

Query: 149 EDDWMVVILTTGSPVGRF 167
            D W+VVILTT +P G +
Sbjct: 149 GDIWVVVILTTNTPEGGY 156

[Close]

BLAST of ClCG02G015890 vs. TrEMBL
Match: A6YTC7_CUCME (GPI-anchored protein-like protein II OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.1e-92
Identity = 174/196 (88.78%), Postives = 180/196 (91.84%), Query Frame = 1


Query: 1   MPSSSFFSFFPVFAIAFLFFSSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIAN 60
           MPSSSFFS   VF IA LFFS PVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIAN
Sbjct: 1   MPSSSFFSVSRVFVIALLFFS-PVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIAN 60

Query: 61  EVADDAEDQPCAVTTAKSNVVASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQ 120
           E+ADDAEDQPCAVTT KSNVVASRPSQITKFP YAEKCKVDINTT+DAVVMPVCVPK+VQ
Sbjct: 61  EMADDAEDQPCAVTTTKSNVVASRPSQITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQ 120

Query: 121 TLLLANYTHSQYAKYLNDSRFVGAGLGKEDDWMVVILTTGSPVGRFEGSGAGSLVVSIWG 180
           TLLL NYTHSQYAKYLNDSRFVGAGLGKEDDWMVV+LTTG+  G FEGSGAGSLV SIWG
Sbjct: 121 TLLLTNYTHSQYAKYLNDSRFVGAGLGKEDDWMVVVLTTGTNAGSFEGSGAGSLVGSIWG 180

Query: 181 WVVLVLLGFLIGDFVR 197
           W VLVL+G LIGD VR
Sbjct: 181 WAVLVLVGLLIGDIVR 195

[Close]

BLAST of ClCG02G015890 vs. TrEMBL
Match: A0A0A0LLP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021670 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 2.4e-79
Identity = 146/169 (86.39%), Postives = 156/169 (92.31%), Query Frame = 1


Query: 28  DEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEVADDAEDQPCAVTTAKSNVVASRPSQ 87
           +EEDNLLQGLNSYRQAQNLPPLVKNAKADC+ANE+ADDAEDQPCAVTT KSNVVASRPSQ
Sbjct: 7   NEEDNLLQGLNSYRQAQNLPPLVKNAKADCVANEMADDAEDQPCAVTTTKSNVVASRPSQ 66

Query: 88  ITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLANYTHSQYAKYLNDSRFVGAGLG 147
           ITKFP YAEKCKVDINTT+DAVVMPVCVPK+VQTLLL NYTHSQYAKYLNDSRFVGAGLG
Sbjct: 67  ITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQTLLLTNYTHSQYAKYLNDSRFVGAGLG 126

Query: 148 KEDDWMVVILTTGSPVGRFEGSGAGSLVVSIWGWVVLVLLGFLIGDFVR 197
           KEDDWMVV+LTTG+  G FEGSGAG  + SIW W V VL+G LIGD+VR
Sbjct: 127 KEDDWMVVVLTTGTNAGSFEGSGAGPALGSIWVWAVAVLVGLLIGDYVR 175

[Close]

BLAST of ClCG02G015890 vs. TrEMBL
Match: W9S359_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002452 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-52
Identity = 106/194 (54.64%), Postives = 134/194 (69.07%), Query Frame = 1


Query: 1   MPSSSFFSFFPVFAIAFLFFSSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIAN 60
           M S      F V   AFL   + VLS D+EDNLLQGLNSYRQ+Q LPPLVKN KA+C+A+
Sbjct: 1   MESFKLSLLFFVLLHAFLLLPNSVLSNDDEDNLLQGLNSYRQSQRLPPLVKNGKAECLAD 60

Query: 61  EVADDAEDQPCAVTTAKSNVVASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQ 120
           E+AD+ EDQPC    A +N+  S  +Q+T +P   +KCK+D NTTSD V++PVCV  +V 
Sbjct: 61  EIADEMEDQPCTTFAAGANIAPSTQTQLTNYPKLLKKCKIDANTTSDGVILPVCVSNLVP 120

Query: 121 TLLLANYTHSQYAKYLNDSRFVGAGLGKEDDWMVVILTTGSPVGRFEGS-------GAGS 180
           TLLL NYTH+ YAKYLN++++ GAGLG EDDWMVV+L+T +P G F GS       G G 
Sbjct: 121 TLLLTNYTHTSYAKYLNNTKYTGAGLGSEDDWMVVVLSTSTPTGSFSGSLSLVSMMGFGH 180

Query: 181 LVVSIWG-WVVLVL 187
            +V  WG W + VL
Sbjct: 181 YLV--WGLWSLFVL 192

[Close]

BLAST of ClCG02G015890 vs. TrEMBL
Match: M4FD22_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.3e-44
Identity = 88/172 (51.16%), Postives = 118/172 (68.60%), Query Frame = 1


Query: 8   SFFPVFAIAFLFFSSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEVADDAE 67
           S + V  + F   S+ V+S  EEDNLLQGLNSYR AQ++PP  KN KADC+A+E+AD  E
Sbjct: 4   SLYIVHLLIFSLISTYVISNQEEDNLLQGLNSYRTAQSVPPFAKNDKADCVADEIADKLE 63

Query: 68  DQPCAVTTAKSNVV-ASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLAN 127
           D+PC   T  S +   S P +++ +     +CKVD N+T D +++PVC+P  V TL+L N
Sbjct: 64  DEPCTNHTTVSTITPGSVPPRLSNYQDILSECKVDPNSTRDGLILPVCIPNRVPTLVLTN 123

Query: 128 YTHSQYAKYLNDSRFVGAGLGKEDDWMVVILTTGSPVGRFEGSGAGSLVVSI 179
           YTH+ YA+YLNDSR+VGAG+G E +WMVV+LTT +P G F    A SL V +
Sbjct: 124 YTHTSYAQYLNDSRYVGAGVGSEKEWMVVVLTTSTPGGSFSSGEATSLRVMV 175

[Close]

BLAST of ClCG02G015890 vs. TrEMBL
Match: Q9ZVL0_ARATH (Glycoprotein membrane GPI-anchored OS=Arabidopsis thaliana GN=T22H22.25 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.3e-44
Identity = 91/189 (48.15%), Postives = 119/189 (62.96%), Query Frame = 1


Query: 8   SFFPVFAIAFLFFSSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEVADDAE 67
           SF+ +  + F   S+ V+S   EDNLLQGLNSYR AQ +PP  KN KADC+A+E+AD  E
Sbjct: 10  SFYIIHLLIFSLISTCVVSNQAEDNLLQGLNSYRTAQRVPPFAKNEKADCVADEIADKLE 69

Query: 68  DQPCAVTTAKSNVV-ASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLAN 127
           DQPC   T  S V   S P ++T +     +CK+D NTT D +++PVC+P  + TL L N
Sbjct: 70  DQPCTNHTTASTVTPGSVPPRLTNYQDILSECKIDPNTTRDGLILPVCIPNRIPTLALTN 129

Query: 128 YTHSQYAKYLNDSRFVGAGLGKEDDWMVVILTTGSPVGRFEGSGAGSLVVSIWGWVVLVL 187
           YT + YA+YLNDSR+VGAG+G E +WMVV+LTT +P G F    A     S+     L L
Sbjct: 130 YTQTGYARYLNDSRYVGAGVGSEKEWMVVVLTTSTPGGSFTAGVAAGKATSVRVMAGLGL 189

Query: 188 LGFLIGDFV 196
           +G L    V
Sbjct: 190 MGLLFSCLV 198

[Close]

BLAST of ClCG02G015890 vs. TAIR10
Match: AT1G54860.1 (AT1G54860.1 Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 185.3 bits (469), Expect = 3.7e-47
Identity = 91/189 (48.15%), Postives = 117/189 (61.90%), Query Frame = 1


Query: 8   SFFPVFAIAFLFFSSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEVADDAE 67
           SF+ +  + F   S+ V+S   EDNLLQGLNSYR AQ +PP  KN KADC+A+E+AD  E
Sbjct: 10  SFYIIHLLIFSLISTCVVSNQAEDNLLQGLNSYRTAQRVPPFAKNEKADCVADEIADKLE 69

Query: 68  DQPCAVTTAKSNVV-ASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLAN 127
           DQPC   T  S V   S P ++T +     +CK+D NTT D +++PVC+P  + TL L N
Sbjct: 70  DQPCTNHTTASTVTPGSVPPRLTNYQDILSECKIDPNTTRDGLILPVCIPNRIPTLALTN 129

Query: 128 YTHSQYAKYLNDSRFVGAGLGKEDDWMVVILTTGSPVGRFEGSGAGSLVVSIWGWVVLVL 187
           YT + YA+YLNDSR+VGAG+G E +WMVV+LTT +P G F    A     S+     L L
Sbjct: 130 YTQTGYARYLNDSRYVGAGVGSEKEWMVVVLTTSTPGGSFTAGVAAGKATSVRVMAGLGL 189

Query: 188 LGFLIGDFV 196
           +G L    V
Sbjct: 190 MGLLFSCLV 198

[Close]

BLAST of ClCG02G015890 vs. TAIR10
Match: AT3G06035.1 (AT3G06035.1 Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 149.8 bits (377), Expect = 1.7e-36
Identity = 72/156 (46.15%), Postives = 99/156 (63.46%), Query Frame = 1


Query: 12  VFAIAFLFFSSPVLSK-DEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEVADDAEDQP 71
           +F    L  + PVLS  DEED LL G+NSYR  QNL  L KN  A+C+A+E+AD  +++P
Sbjct: 10  LFLSILLCLNRPVLSDTDEEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKP 69

Query: 72  CAVTTAKSNVVASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLANYTHS 131
           C   T  + V  + P Q   +P    KC ++++ T D  +MP CVP++   L+L N+T S
Sbjct: 70  CTNDTGSATVPGTEP-QFANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKS 129

Query: 132 QYAKYLNDSRFVGAGLGKEDDWMVVILTTGSPVGRF 167
           QY+  LNDS+F G G+GKEDDW+VV+LTT +P G +
Sbjct: 130 QYSMSLNDSKFTGIGIGKEDDWIVVVLTTNTPEGSY 164

[Close]

BLAST of ClCG02G015890 vs. TAIR10
Match: AT5G19250.1 (AT5G19250.1 Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 141.7 bits (356), Expect = 4.7e-34
Identity = 74/182 (40.66%), Postives = 108/182 (59.34%), Query Frame = 1


Query: 17  FLFFSSPVLSK--DEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEVADDAEDQPCAVT 76
           FL     VLS   DEED LL G+NSYR + NL  L+ N  A+C+A+E+AD  ++QPC  T
Sbjct: 15  FLSLHPLVLSDTADEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQPCTNT 74

Query: 77  TAKSNVVASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLANYTHSQYAK 136
           T  ++V  + P      P+   KC+++   T D  ++P CVP +  +L+L N+T SQY+K
Sbjct: 75  TGSASVPGTTPG-FPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSK 134

Query: 137 YLNDSRFVGAGLGKEDDWMVVILTTGSPVGRFE-GSGAGSLVVSIWGWVVLVLLGFLIGD 196
            LNDS+F G G+G +D+W+VV+LTT +P G +   S +G+    + G V   L+  L   
Sbjct: 135 DLNDSKFTGIGIGSDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSLMFLLFCF 194

[Close]

BLAST of ClCG02G015890 vs. TAIR10
Match: AT5G19240.1 (AT5G19240.1 Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 119.8 bits (299), Expect = 1.9e-27
Identity = 65/158 (41.14%), Postives = 94/158 (59.49%), Query Frame = 1


Query: 17  FLFFSSPVLSKDEEDNLLQGL-NSYRQAQNLPPLVKNAKADCIANEVADDAEDQPCAVTT 76
           FL    PVLS  + +NLL  + N YR++ NL  L KN  A+C+A+EV D  ++QPC  TT
Sbjct: 16  FLSLHRPVLSNTDGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPCTNTT 75

Query: 77  AKSNVVASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLANYTHSQYAKY 136
             ++V  + P  I  FP+   KC+++ N T D +++ VC PK   T  L+++  +   K 
Sbjct: 76  GSASVPGTDPG-IPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFA-NVLTKN 135

Query: 137 LNDSRFVGAGLGKEDD--WMVVILTTGSPVGRFEGSGA 172
           LNDS+F GAG+G + D  W+V +LTT +P G +  SGA
Sbjct: 136 LNDSKFTGAGVGIDSDGIWLVTVLTTNTPGGSYSNSGA 171

[Close]

BLAST of ClCG02G015890 vs. TAIR10
Match: AT5G19230.1 (AT5G19230.1 Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 94.4 bits (233), Expect = 8.6e-20
Identity = 53/138 (38.41%), Postives = 72/138 (52.17%), Query Frame = 1


Query: 29  EEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEVADDAEDQPCAVTTAKSNVVASRPSQI 88
           E+D LL   N YR   NL  L KN  A+C+A+EV D  ++QPC  T   + V  +     
Sbjct: 29  EDDLLLTVFNKYRTGLNLKTLTKNENAECLADEVVDQLKNQPCTNTNNSAPVPGN----- 88

Query: 89  TKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLANYTHSQYAKYLNDSRFVGAGLGK 148
               +   KC ++     D V+M VC PK  +   L+N+ +S   K LNDS+  G G+G 
Sbjct: 89  ----NLLAKCSLNTTVVRDGVIMQVCFPKHDKNPDLSNF-NSVVLKNLNDSKITGIGIGS 148

Query: 149 EDDWMVVILTTGSPVGRF 167
            D W+VVILTT +P G +
Sbjct: 149 GDIWVVVILTTNTPEGGY 156

[Close]

BLAST of ClCG02G015890 vs. NCBI nr
Match: gi|659070384|ref|XP_008454814.1| (PREDICTED: uncharacterized GPI-anchored protein At3g06035 [Cucumis melo])

HSP 1 Score: 347.4 bits (890), Expect = 1.6e-92
Identity = 174/196 (88.78%), Postives = 180/196 (91.84%), Query Frame = 1


Query: 1   MPSSSFFSFFPVFAIAFLFFSSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIAN 60
           MPSSSFFS   VF IA LFFS PVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIAN
Sbjct: 1   MPSSSFFSVSRVFVIALLFFS-PVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIAN 60

Query: 61  EVADDAEDQPCAVTTAKSNVVASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQ 120
           E+ADDAEDQPCAVTT KSNVVASRPSQITKFP YAEKCKVDINTT+DAVVMPVCVPK+VQ
Sbjct: 61  EMADDAEDQPCAVTTTKSNVVASRPSQITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQ 120

Query: 121 TLLLANYTHSQYAKYLNDSRFVGAGLGKEDDWMVVILTTGSPVGRFEGSGAGSLVVSIWG 180
           TLLL NYTHSQYAKYLNDSRFVGAGLGKEDDWMVV+LTTG+  G FEGSGAGSLV SIWG
Sbjct: 121 TLLLTNYTHSQYAKYLNDSRFVGAGLGKEDDWMVVVLTTGTNAGSFEGSGAGSLVGSIWG 180

Query: 181 WVVLVLLGFLIGDFVR 197
           W VLVL+G LIGD VR
Sbjct: 181 WAVLVLVGLLIGDIVR 195

[Close]

BLAST of ClCG02G015890 vs. NCBI nr
Match: gi|778666768|ref|XP_011648805.1| (PREDICTED: uncharacterized GPI-anchored protein At3g06035-like [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 4.1e-88
Identity = 165/194 (85.05%), Postives = 175/194 (90.21%), Query Frame = 1


Query: 3   SSSFFSFFPVFAIAFLFFSSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEV 62
           SS+ FS F VF IA LFFS PVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADC+ANE+
Sbjct: 8   SSTLFSVFRVFVIALLFFS-PVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCVANEM 67

Query: 63  ADDAEDQPCAVTTAKSNVVASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTL 122
           ADDAEDQPCAVTT KSNVVASRPSQITKFP YAEKCKVDINTT+DAVVMPVCVPK+VQTL
Sbjct: 68  ADDAEDQPCAVTTTKSNVVASRPSQITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQTL 127

Query: 123 LLANYTHSQYAKYLNDSRFVGAGLGKEDDWMVVILTTGSPVGRFEGSGAGSLVVSIWGWV 182
           LL NYTHSQYAKYLNDSRFVGAGLGKEDDWMVV+LTTG+  G FEGSGAG  + SIW W 
Sbjct: 128 LLTNYTHSQYAKYLNDSRFVGAGLGKEDDWMVVVLTTGTNAGSFEGSGAGPALGSIWVWA 187

Query: 183 VLVLLGFLIGDFVR 197
           V VL+G LIGD+VR
Sbjct: 188 VAVLVGLLIGDYVR 200

[Close]

BLAST of ClCG02G015890 vs. NCBI nr
Match: gi|700205777|gb|KGN60896.1| (hypothetical protein Csa_2G021670 [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 3.5e-79
Identity = 146/169 (86.39%), Postives = 156/169 (92.31%), Query Frame = 1


Query: 28  DEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEVADDAEDQPCAVTTAKSNVVASRPSQ 87
           +EEDNLLQGLNSYRQAQNLPPLVKNAKADC+ANE+ADDAEDQPCAVTT KSNVVASRPSQ
Sbjct: 7   NEEDNLLQGLNSYRQAQNLPPLVKNAKADCVANEMADDAEDQPCAVTTTKSNVVASRPSQ 66

Query: 88  ITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQTLLLANYTHSQYAKYLNDSRFVGAGLG 147
           ITKFP YAEKCKVDINTT+DAVVMPVCVPK+VQTLLL NYTHSQYAKYLNDSRFVGAGLG
Sbjct: 67  ITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQTLLLTNYTHSQYAKYLNDSRFVGAGLG 126

Query: 148 KEDDWMVVILTTGSPVGRFEGSGAGSLVVSIWGWVVLVLLGFLIGDFVR 197
           KEDDWMVV+LTTG+  G FEGSGAG  + SIW W V VL+G LIGD+VR
Sbjct: 127 KEDDWMVVVLTTGTNAGSFEGSGAGPALGSIWVWAVAVLVGLLIGDYVR 175

[Close]

BLAST of ClCG02G015890 vs. NCBI nr
Match: gi|703135332|ref|XP_010105845.1| (hypothetical protein L484_002452 [Morus notabilis])

HSP 1 Score: 214.5 bits (545), Expect = 1.6e-52
Identity = 106/194 (54.64%), Postives = 134/194 (69.07%), Query Frame = 1


Query: 1   MPSSSFFSFFPVFAIAFLFFSSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIAN 60
           M S      F V   AFL   + VLS D+EDNLLQGLNSYRQ+Q LPPLVKN KA+C+A+
Sbjct: 1   MESFKLSLLFFVLLHAFLLLPNSVLSNDDEDNLLQGLNSYRQSQRLPPLVKNGKAECLAD 60

Query: 61  EVADDAEDQPCAVTTAKSNVVASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQ 120
           E+AD+ EDQPC    A +N+  S  +Q+T +P   +KCK+D NTTSD V++PVCV  +V 
Sbjct: 61  EIADEMEDQPCTTFAAGANIAPSTQTQLTNYPKLLKKCKIDANTTSDGVILPVCVSNLVP 120

Query: 121 TLLLANYTHSQYAKYLNDSRFVGAGLGKEDDWMVVILTTGSPVGRFEGS-------GAGS 180
           TLLL NYTH+ YAKYLN++++ GAGLG EDDWMVV+L+T +P G F GS       G G 
Sbjct: 121 TLLLTNYTHTSYAKYLNNTKYTGAGLGSEDDWMVVVLSTSTPTGSFSGSLSLVSMMGFGH 180

Query: 181 LVVSIWG-WVVLVL 187
            +V  WG W + VL
Sbjct: 181 YLV--WGLWSLFVL 192

[Close]

BLAST of ClCG02G015890 vs. NCBI nr
Match: gi|1009117190|ref|XP_015875183.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Ziziphus jujuba])

HSP 1 Score: 210.3 bits (534), Expect = 3.1e-51
Identity = 103/196 (52.55%), Postives = 138/196 (70.41%), Query Frame = 1


Query: 1   MPSSSFFSFFPVFAIAFLFFSSPVLSKDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIAN 60
           M S     FF +F  AFLF    VLS D+EDNL+QGLNSYRQ+ +L  L +N +ADC+A+
Sbjct: 6   MASFKITLFFFLFLHAFLFLPYMVLSNDDEDNLIQGLNSYRQSLSLSALARNERADCLAD 65

Query: 61  EVADDAEDQPCAVTTAKSNVVASRPSQITKFPHYAEKCKVDINTTSDAVVMPVCVPKMVQ 120
           EVAD  ED+ C   T+ SN+V + PSQ+T +P   +KCK+D+N+T+D V+MPVCVPK+V 
Sbjct: 66  EVADQLEDEHCTPVTSSSNIVPTTPSQLTDYPKLLKKCKIDMNSTTDGVIMPVCVPKLVP 125

Query: 121 TLLLANYTHSQYAKYLNDSRFVGAGLGKEDDWMVVILTTGSPVGRFEGS--------GAG 180
           TL+L NYT SQYAK+LN+S+F GAG+G EDDWMVVILTT +P G F  S          G
Sbjct: 126 TLVLTNYTRSQYAKHLNNSKFTGAGVGSEDDWMVVILTTNTPSGNFASSAISWVSQLALG 185

Query: 181 SLVVSIWGWVVLVLLG 189
            L V ++  ++++L+G
Sbjct: 186 HLFVPLFLGILMLLVG 201

The following BLAST results are available for this feature:

BLAST of ClCG02G015890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UGPI4_ARATH	3.1e-35	46.15	Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana GN=At3g06...	[more]
UGPI3_ARATH	8.3e-33	40.66	Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana GN=At5g19...	[more]
UGPI2_ARATH	3.4e-26	41.14	Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana GN=At5g19...	[more]
UGPI1_ARATH	1.5e-18	38.41	Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana GN=At5g19...	[more]

BLAST of ClCG02G015890 vs. TrEMBL


Match Name	E-value	Identity	Description
A6YTC7_CUCME	1.1e-92	88.78	GPI-anchored protein-like protein II OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0LLP1_CUCSA	2.4e-79	86.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021670 PE=4 SV=1	[more]
W9S359_9ROSA	1.1e-52	54.64	Uncharacterized protein OS=Morus notabilis GN=L484_002452 PE=4 SV=1	[more]
M4FD22_BRARP	7.3e-44	51.16	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
Q9ZVL0_ARATH	7.3e-44	48.15	Glycoprotein membrane GPI-anchored OS=Arabidopsis thaliana GN=T22H22.25 PE=2 SV=...	[more]

BLAST of ClCG02G015890 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54860.1	3.7e-47	48.15	Glycoprotein membrane precursor GPI-anchored	[more]
AT3G06035.1	1.7e-36	46.15	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19250.1	4.7e-34	40.66	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19240.1	1.9e-27	41.14	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19230.1	8.6e-20	38.41	Glycoprotein membrane precursor GPI-anchored	[more]

BLAST of ClCG02G015890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070384\|ref\|XP_008454814.1\|	1.6e-92	88.78	PREDICTED: uncharacterized GPI-anchored protein At3g06035 [Cucumis melo]	[more]
gi\|778666768\|ref\|XP_011648805.1\|	4.1e-88	85.05	PREDICTED: uncharacterized GPI-anchored protein At3g06035-like [Cucumis sativus]	[more]
gi\|700205777\|gb\|KGN60896.1\|	3.5e-79	86.39	hypothetical protein Csa_2G021670 [Cucumis sativus]	[more]
gi\|703135332\|ref\|XP_010105845.1\|	1.6e-52	54.64	hypothetical protein L484_002452 [Morus notabilis]	[more]
gi\|1009117190\|ref\|XP_015875183.1\|	3.1e-51	52.55	PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G015890.1	ClCG02G015890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRODOM	PD208950		coord: 24..166 score: 8.0
None	No IPR available	PANTHER	PTHR33976	FAMILY NOT NAMED	coord: 1..195 score: 8.7
None	No IPR available	PANTHER	PTHR33976:SF2	GLYCOPROTEIN MEMBRANE GPI-ANCHORED	coord: 1..195 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G015890	Csa2G021640	Cucumber (Chinese Long) v2	cuwcgB122
ClCG02G015890	MELO3C004276	Melon (DHL92) v3.5.1	mewcgB375
ClCG02G015890	Cla019882	Watermelon (97103) v1	wcgwmB197
ClCG02G015890	Cla97C02G041640	Watermelon (97103) v2	wcgwmbB138
ClCG02G015890	Bhi05G001650	Wax gourd	wcgwgoB269
ClCG02G015890	CSPI02G03830	Wild cucumber (PI 183967)	cpiwcgB128
ClCG02G015890	Cucsa.091570	Cucumber (Gy14) v1	cgywcgB103
ClCG02G015890	CmaCh12G010780	Cucurbita maxima (Rimu)	cmawcgB156
ClCG02G015890	CmaCh05G011460	Cucurbita maxima (Rimu)	cmawcgB695
ClCG02G015890	CmoCh05G011570	Cucurbita moschata (Rifu)	cmowcgB700
ClCG02G015890	CmoCh12G010940	Cucurbita moschata (Rifu)	cmowcgB144
ClCG02G015890	Lsi11G005320	Bottle gourd (USVL1VR-Ls)	lsiwcgB098
ClCG02G015890	Cp4.1LG11g09470	Cucurbita pepo (Zucchini)	cpewcgB104
ClCG02G015890	Cp4.1LG07g09190	Cucurbita pepo (Zucchini)	cpewcgB733
ClCG02G015890	CsGy2G003920	Cucumber (Gy14) v2	cgybwcgB119
ClCG02G015890	MELO3C004276.2	Melon (DHL92) v3.6.1	medwcgB369
ClCG02G015890	Carg12896	Silver-seed gourd	carwcgB0883
ClCG02G015890	Carg17550	Silver-seed gourd	carwcgB0692
ClCG02G015890	CsaV3_2G005150	Cucumber (Chinese Long) v3	cucwcgB137

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None