Carg17550 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17550
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Glycoprotein membrane GPI-anchored
Location	Cucurbita_argyrosperma_scaffold_183 : 181008 .. 181517 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACTGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGATCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGA

mRNA sequence

GAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACTGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGATCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGA

Coding sequence (CDS)

GAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACTGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGATCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGA

Protein sequence

EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL

Homology

[Close]

BLAST of Carg17550 vs. NCBI nr
Match: XP_022938132.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita moschata])

HSP 1 Score: 335.1 bits (858), Expect = 1.4e-88
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS
Sbjct: 33  EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 92

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL
Sbjct: 93  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 152

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           GVDVDWMVVILTTA+HGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL
Sbjct: 153 GVDVDWMVVILTTAEHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 201

[Close]

BLAST of Carg17550 vs. NCBI nr
Match: XP_023536945.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.1 bits (858), Expect = 1.4e-88
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS
Sbjct: 34  EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 93

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL
Sbjct: 94  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 153

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           GVDVDWMVVILTTA+HGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL
Sbjct: 154 GVDVDWMVVILTTAEHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 202

[Close]

BLAST of Carg17550 vs. NCBI nr
Match: XP_022965946.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima])

HSP 1 Score: 323.9 bits (829), Expect = 3.2e-85
Identity = 163/169 (96.45%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           EEDKENLLQGLNGYRQAQKLPPFEKNAKA CIA+KIA+VDKDHPCNITTANSTVTARHLS
Sbjct: 32  EEDKENLLQGLNGYRQAQKLPPFEKNAKACCIADKIADVDKDHPCNITTANSTVTARHLS 91

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QI NFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL
Sbjct: 92  QIANFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 151

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           GVDVDWMVVILTTA+HGGSFAGSGAGSVVASMGA VLVVLLGLFLVGNL
Sbjct: 152 GVDVDWMVVILTTAEHGGSFAGSGAGSVVASMGASVLVVLLGLFLVGNL 200

[Close]

BLAST of Carg17550 vs. NCBI nr
Match: XP_022999135.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima])

HSP 1 Score: 209.5 bits (532), Expect = 8.7e-51
Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 0


Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           +++++NLLQGLN YRQAQ LPP  KNAKA CIA++IA+ +KD PC +TTA S V     S
Sbjct: 27  KDEEDNLLQGLNSYRQAQNLPPLAKNAKADCIADEIADDNKDQPCAVTTAKSNVVPSRPS 86

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QI  F  YAEKCKVD+NTT DAIVMPVCVP +V+ +LLANYT +QYA+YLN+S+FVGAG+
Sbjct: 87  QITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGV 146

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFL 166
           G + DWMVV+LTT   GGSF GSG GS+VAS+   V + LLGL +
Sbjct: 147 GSEDDWMVVVLTTGASGGSFEGSGTGSLVASVWGCVALALLGLMI 191

[Close]

BLAST of Carg17550 vs. NCBI nr
Match: XP_022946761.1 (uncharacterized GPI-anchored protein At3g06035 [Cucurbita moschata] >XP_023545378.1 uncharacterized GPI-anchored protein At3g06035 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.0 bits (528), Expect = 2.5e-50
Identity = 105/168 (62.50%), Postives = 131/168 (77.98%), Query Frame = 0


Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           +++++NLLQGLN YRQAQ LPP  KNAKA CIAE+IA+ +KD PC +TTA S V     S
Sbjct: 27  KDEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVPSRPS 86

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QI  F  YAEKCKVD+NTT DAIVMPVCVP +V+ +LLANYT +QYA+YLN+S+FVGAG+
Sbjct: 87  QITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGV 146

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGN 169
           G + DWMVV+LTT   GGSF GSG  S++AS+   V + LLGL ++GN
Sbjct: 147 GSEDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGL-MIGN 193

[Close]

BLAST of Carg17550 vs. TAIR10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 155.2 bits (391), Expect = 3.5e-38
Identity = 81/168 (48.21%), Postives = 116/168 (69.05%), Query Frame = 0


Query: 4   KENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHL-SQI 63
           ++NLLQGLN YR AQ++PPF KN KA C+A++IA+  +D PC   T  STVT   +  ++
Sbjct: 32  EDNLLQGLNSYRTAQRVPPFAKNEKADCVADEIADKLEDQPCTNHTTASTVTPGSVPPRL 91

Query: 64  ENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGV 123
            N++    +CK+D NTT D +++PVC+P+ +  + L NYTQT YA+YLN+S++VGAG+G 
Sbjct: 92  TNYQDILSECKIDPNTTRDGLILPVCIPNRIPTLALTNYTQTGYARYLNDSRYVGAGVGS 151

Query: 124 DVDWMVVILTTADHGGSF-AGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           + +WMVV+LTT+  GGSF AG  AG       A  + V+ GL L+G L
Sbjct: 152 EKEWMVVVLTTSTPGGSFTAGVAAGK------ATSVRVMAGLGLMGLL 193

[Close]

BLAST of Carg17550 vs. TAIR10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 112.8 bits (281), Expect = 2.0e-25
Identity = 54/140 (38.57%), Postives = 86/140 (61.43%), Query Frame = 0


Query: 2   EDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQ 61
           ++++ LL G+N YR  Q L    KN  A C+A++IA+  K+ PC   T ++TV      Q
Sbjct: 27  DEEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKPCTNDTGSATVPGTE-PQ 86

Query: 62  IENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLG 121
             N+     KC ++++ T D  +MP CVP +   ++L N+T++QY+  LN+SKF G G+G
Sbjct: 87  FANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSLNDSKFTGIGIG 146

Query: 122 VDVDWMVVILTTADHGGSFA 142
            + DW+VV+LTT    GS++
Sbjct: 147 KEDDWIVVVLTTNTPEGSYS 165

[Close]

BLAST of Carg17550 vs. TAIR10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 101.7 bits (252), Expect = 4.6e-22
Identity = 55/169 (32.54%), Postives = 98/169 (57.99%), Query Frame = 0


Query: 2   EDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQ 61
           ++++ LL G+N YR +  L     N  A C+A++IA+  K+ PC  TT +++V       
Sbjct: 28  DEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQPCTNTTGSASVPGT-TPG 87

Query: 62  IENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLG 121
             N  +   KC+++   T D  ++P CVP++   ++L N+T +QY++ LN+SKF G G+G
Sbjct: 88  FPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSKDLNDSKFTGIGIG 147

Query: 122 VDVDWMVVILTTADHGGSF-----AGSGAGSVVASMGAPVLVVLLGLFL 166
            D +W+VV+LTT+   GS+     +G+ A  V   + + ++ +L   F+
Sbjct: 148 SDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSLMFLLFCFFM 195

[Close]

BLAST of Carg17550 vs. TAIR10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 93.2 bits (230), Expect = 1.6e-19
Identity = 53/146 (36.30%), Postives = 84/146 (57.53%), Query Frame = 0


Query: 3   DKENLL-QGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQ 62
           D ENLL    N YR++  L   +KN  A C+A+++ +  ++ PC  TT +++V       
Sbjct: 28  DGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPCTNTTGSASVPGTD-PG 87

Query: 63  IENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLG 122
           I NF +   KC+++ N T D +++ VC P       L+++      + LN+SKF GAG+G
Sbjct: 88  IPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFANV-LTKNLNDSKFTGAGVG 147

Query: 123 VDVD--WMVVILTTADHGGSFAGSGA 146
           +D D  W+V +LTT   GGS++ SGA
Sbjct: 148 IDSDGIWLVTVLTTNTPGGSYSNSGA 171

[Close]

BLAST of Carg17550 vs. TAIR10
Match: AT5G19230.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-10
Identity = 49/161 (30.43%), Postives = 72/161 (44.72%), Query Frame = 0


Query: 7   LLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFE 66
           LL   N YR    L    KN  A C+A+++ +  K+ PC  T  ++ V   +L       
Sbjct: 33  LLTVFNKYRTGLNLKTLTKNENAECLADEVVDQLKNQPCTNTNNSAPVPGNNL------- 92

Query: 67  HYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDW 126
               KC ++     D ++M VC P   +   L+N+      + LN+SK  G G+G    W
Sbjct: 93  --LAKCSLNTTVVRDGVIMQVCFPKHDKNPDLSNFNSV-VLKNLNDSKITGIGIGSGDIW 152

Query: 127 MVVILTT-ADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLV 167
           +VVILTT    GG    +   S   + G   LV    LFL+
Sbjct: 153 VVVILTTNTPEGGYSLLTTTNSGAYAFGVNGLVSSSFLFLL 183

[Close]

BLAST of Carg17550 vs. Swiss-Prot
Match: sp|Q84MC0|UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.6e-24
Identity = 54/140 (38.57%), Postives = 86/140 (61.43%), Query Frame = 0


Query: 2   EDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQ 61
           ++++ LL G+N YR  Q L    KN  A C+A++IA+  K+ PC   T ++TV      Q
Sbjct: 27  DEEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKPCTNDTGSATVPGTE-PQ 86

Query: 62  IENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLG 121
             N+     KC ++++ T D  +MP CVP +   ++L N+T++QY+  LN+SKF G G+G
Sbjct: 87  FANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSLNDSKFTGIGIG 146

Query: 122 VDVDWMVVILTTADHGGSFA 142
            + DW+VV+LTT    GS++
Sbjct: 147 KEDDWIVVVLTTNTPEGSYS 165

[Close]

BLAST of Carg17550 vs. Swiss-Prot
Match: sp|P59833|UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.3e-21
Identity = 55/169 (32.54%), Postives = 98/169 (57.99%), Query Frame = 0


Query: 2   EDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQ 61
           ++++ LL G+N YR +  L     N  A C+A++IA+  K+ PC  TT +++V       
Sbjct: 28  DEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQPCTNTTGSASVPGT-TPG 87

Query: 62  IENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLG 121
             N  +   KC+++   T D  ++P CVP++   ++L N+T +QY++ LN+SKF G G+G
Sbjct: 88  FPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSKDLNDSKFTGIGIG 147

Query: 122 VDVDWMVVILTTADHGGSF-----AGSGAGSVVASMGAPVLVVLLGLFL 166
            D +W+VV+LTT+   GS+     +G+ A  V   + + ++ +L   F+
Sbjct: 148 SDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSLMFLLFCFFM 195

[Close]

BLAST of Carg17550 vs. Swiss-Prot
Match: sp|Q84VZ5|UGPI2_ARATH (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 GN=At5g19240 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 3.0e-18
Identity = 53/146 (36.30%), Postives = 84/146 (57.53%), Query Frame = 0


Query: 3   DKENLL-QGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQ 62
           D ENLL    N YR++  L   +KN  A C+A+++ +  ++ PC  TT +++V       
Sbjct: 28  DGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPCTNTTGSASVPGTD-PG 87

Query: 63  IENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLG 122
           I NF +   KC+++ N T D +++ VC P       L+++      + LN+SKF GAG+G
Sbjct: 88  IPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFANV-LTKNLNDSKFTGAGVG 147

Query: 123 VDVD--WMVVILTTADHGGSFAGSGA 146
           +D D  W+V +LTT   GGS++ SGA
Sbjct: 148 IDSDGIWLVTVLTTNTPGGSYSNSGA 171

[Close]

BLAST of Carg17550 vs. Swiss-Prot
Match: sp|Q8GUL8|UGPI1_ARATH (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 GN=At5g19230 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.6e-09
Identity = 49/161 (30.43%), Postives = 72/161 (44.72%), Query Frame = 0


Query: 7   LLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFE 66
           LL   N YR    L    KN  A C+A+++ +  K+ PC  T  ++ V   +L       
Sbjct: 33  LLTVFNKYRTGLNLKTLTKNENAECLADEVVDQLKNQPCTNTNNSAPVPGNNL------- 92

Query: 67  HYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDW 126
               KC ++     D ++M VC P   +   L+N+      + LN+SK  G G+G    W
Sbjct: 93  --LAKCSLNTTVVRDGVIMQVCFPKHDKNPDLSNFNSV-VLKNLNDSKITGIGIGSGDIW 152

Query: 127 MVVILTT-ADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLV 167
           +VVILTT    GG    +   S   + G   LV    LFL+
Sbjct: 153 VVVILTTNTPEGGYSLLTTTNSGAYAFGVNGLVSSSFLFLL 183

[Close]

BLAST of Carg17550 vs. TrEMBL
Match: tr|A0A0A0LLP1|A0A0A0LLP1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021670 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 5.9e-48
Identity = 97/165 (58.79%), Postives = 124/165 (75.15%), Query Frame = 0


Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           + +++NLLQGLN YRQAQ LPP  KNAKA C+A ++A+  +D PC +TT  S V A   S
Sbjct: 6   DNEEDNLLQGLNSYRQAQNLPPLVKNAKADCVANEMADDAEDQPCAVTTTKSNVVASRPS 65

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QI  F  YAEKCKVD+NTTADA+VMPVCVP +V+ +LL NYT +QYA+YLN+S+FVGAGL
Sbjct: 66  QITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQTLLLTNYTHSQYAKYLNDSRFVGAGL 125

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFL 166
           G + DWMVV+LTT  + GSF GSGAG  + S+    + VL+GL +
Sbjct: 126 GKEDDWMVVVLTTGTNAGSFEGSGAGPALGSIWVWAVAVLVGLLI 170

[Close]

BLAST of Carg17550 vs. TrEMBL
Match: tr|A0A1S3C074|A0A1S3C074_CUCME (uncharacterized GPI-anchored protein At3g06035 OS=Cucumis melo OX=3656 GN=LOC103495124 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44
Identity = 95/169 (56.21%), Postives = 124/169 (73.37%), Query Frame = 0


Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           +++++NLLQGLN YRQAQ LPP  KNAKA CIA ++A+  +D PC +TT  S V A   S
Sbjct: 26  KDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEMADDAEDQPCAVTTTKSNVVASRPS 85

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QI  F  YAEKCKVD+NTTADA+VMPVCVP +V+ +LL NYT +QYA+YLN+S+FVGAGL
Sbjct: 86  QITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQTLLLTNYTHSQYAKYLNDSRFVGAGL 145

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           G + DWMVV+LTT  + GSF G         +    ++VL+GL L+G++
Sbjct: 146 GKEDDWMVVVLTTGTNAGSFEGXXXXXXXXXIWGWAVLVLVGL-LIGDI 193

[Close]

BLAST of Carg17550 vs. TrEMBL
Match: tr|A6YTC7|A6YTC7_CUCME (GPI-anchored protein-like protein II OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44
Identity = 95/169 (56.21%), Postives = 124/169 (73.37%), Query Frame = 0


Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           +++++NLLQGLN YRQAQ LPP  KNAKA CIA ++A+  +D PC +TT  S V A   S
Sbjct: 26  KDEEDNLLQGLNSYRQAQNLPPLVKNAKADCIANEMADDAEDQPCAVTTTKSNVVASRPS 85

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QI  F  YAEKCKVD+NTTADA+VMPVCVP +V+ +LL NYT +QYA+YLN+S+FVGAGL
Sbjct: 86  QITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQTLLLTNYTHSQYAKYLNDSRFVGAGL 145

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           G + DWMVV+LTT  + GSF G         +    ++VL+GL L+G++
Sbjct: 146 GKEDDWMVVVLTTGTNAGSFEGXXXXXXXXXIWGWAVLVLVGL-LIGDI 193

[Close]

BLAST of Carg17550 vs. TrEMBL
Match: tr|W9S359|W9S359_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002452 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.7e-37
Identity = 76/152 (50.00%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 2   EDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQ 61
           +D++NLLQGLN YRQ+Q+LPP  KN KA C+A++IA+  +D PC    A + +     +Q
Sbjct: 28  DDEDNLLQGLNSYRQSQRLPPLVKNGKAECLADEIADEMEDQPCTTFAAGANIAPSTQTQ 87

Query: 62  IENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLG 121
           + N+    +KCK+D NTT+D +++PVCV ++V  +LL NYT T YA+YLNN+K+ GAGLG
Sbjct: 88  LTNYPKLLKKCKIDANTTSDGVILPVCVSNLVPTLLLTNYTHTSYAKYLNNTKYTGAGLG 147

Query: 122 VDVDWMVVILTTADHGGSFAGSGAGSVVASMG 154
            + DWMVV+L+T+   GSF  SG+ S+V+ MG
Sbjct: 148 SEDDWMVVVLSTSTPTGSF--SGSLSLVSMMG 177

[Close]

BLAST of Carg17550 vs. TrEMBL
Match: tr|V4KF37|V4KF37_EUTSA (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10023896mg PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.8e-36
Identity = 80/166 (48.19%), Postives = 116/166 (69.88%), Query Frame = 0


Query: 2   EDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHL-S 61
           ++++NLLQGLN YR AQ++PPF KN KA C+A++IA+  +D PC   T  STVT   +  
Sbjct: 31  QEEDNLLQGLNSYRTAQRVPPFAKNDKADCVADEIADKLEDEPCTNHTTASTVTPGSVPP 90

Query: 62  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 121
           ++ N++    +CKVD N+T DA+++PVC+P+ V  + L NYT T YAQYLN+S++VGAG+
Sbjct: 91  RLSNYQEILSECKVDANSTRDALILPVCIPNRVPTLALTNYTHTGYAQYLNDSRYVGAGV 150

Query: 122 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLV 167
           G + +WMVV+LTT+  GGSFA   A S  A+ G  ++ +L    LV
Sbjct: 151 GSEKEWMVVVLTTSTPGGSFASGEAISARATAGLAMMGLLFSCILV 196

The following BLAST results are available for this feature:

BLAST of Carg17550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938132.1	1.4e-88	99.41	uncharacterized GPI-anchored protein At3g06035-like [Cucurbita moschata]	[more]
XP_023536945.1	1.4e-88	99.41	uncharacterized GPI-anchored protein At3g06035-like [Cucurbita pepo subsp. pepo]	[more]
XP_022965946.1	3.2e-85	96.45	uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima]	[more]
XP_022999135.1	8.7e-51	63.03	uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima]	[more]
XP_022946761.1	2.5e-50	62.50	uncharacterized GPI-anchored protein At3g06035 [Cucurbita moschata] >XP_02354537...	[more]

BLAST of Carg17550 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54860.1	3.5e-38	48.21	Glycoprotein membrane precursor GPI-anchored	[more]
AT3G06035.1	2.0e-25	38.57	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19250.1	4.6e-22	32.54	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19240.1	1.6e-19	36.30	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19230.1	3.1e-10	30.43	Glycoprotein membrane precursor GPI-anchored	[more]

BLAST of Carg17550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84MC0\|UGPI4_ARATH	3.6e-24	38.57	Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|P59833\|UGPI3_ARATH	8.3e-21	32.54	Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q84VZ5\|UGPI2_ARATH	3.0e-18	36.30	Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q8GUL8\|UGPI1_ARATH	5.6e-09	30.43	Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Carg17550 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LLP1\|A0A0A0LLP1_CUCSA	5.9e-48	58.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021670 PE=4 SV=1	[more]
tr\|A0A1S3C074\|A0A1S3C074_CUCME	1.4e-44	56.21	uncharacterized GPI-anchored protein At3g06035 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A6YTC7\|A6YTC7_CUCME	1.4e-44	56.21	GPI-anchored protein-like protein II OS=Cucumis melo subsp. melo OX=412675 PE=4 ...	[more]
tr\|W9S359\|W9S359_9ROSA	4.7e-37	50.00	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002452 PE=4 SV=1	[more]
tr\|V4KF37\|V4KF37_EUTSA	1.8e-36	48.19	Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10023896mg PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17550-RA	Carg17550-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33976	FAMILY NOT NAMED	coord: 3..166
None	No IPR available	PRODOM	PD208950		coord: 2..134 e-value: 1.0E-35 score: 373.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17550	Cla019882	Watermelon (97103) v1	carwmB0714
Carg17550	Csa2G021640	Cucumber (Chinese Long) v2	carcuB0735
Carg17550	MELO3C004276	Melon (DHL92) v3.5.1	carmeB0711
Carg17550	ClCG02G015890	Watermelon (Charleston Gray)	carwcgB0692
Carg17550	CSPI02G03830	Wild cucumber (PI 183967)	carcpiB0751
Carg17550	Cucsa.091570	Cucumber (Gy14) v1	carcgyB0803
Carg17550	CmaCh05G011460	Cucurbita maxima (Rimu)	carcmaB1001
Carg17550	CmaCh12G010780	Cucurbita maxima (Rimu)	carcmaB1000
Carg17550	CmoCh05G011570	Cucurbita moschata (Rifu)	carcmoB0974
Carg17550	CmoCh12G010940	Cucurbita moschata (Rifu)	carcmoB0973
Carg17550	Lsi11G005320	Bottle gourd (USVL1VR-Ls)	carlsiB654
Carg17550	Cp4.1LG11g09470	Cucurbita pepo (Zucchini)	carcpeB1005
Carg17550	Cp4.1LG07g09190	Cucurbita pepo (Zucchini)	carcpeB1006
Carg17550	CsGy2G003920	Cucumber (Gy14) v2	carcgybB0713
Carg17550	MELO3C004276.2	Melon (DHL92) v3.6.1	carmedB0724
Carg17550	CsaV3_2G005150	Cucumber (Chinese Long) v3	carcucB0754
Carg17550	Cla97C02G041640	Watermelon (97103) v2	carwmbB0746
Carg17550	Bhi05G001650	Wax gourd	carwgoB0843

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17550	Carg12896	Silver-seed gourd	carcarB587

The following block(s) are covering this gene:

None