Carg12338 (gene) Silver-seed gourd

Overview
NameCarg12338
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Description40S ribosomal protein
LocationCucurbita_argyrosperma_scaffold_074 : 393486 .. 395291 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGTTCATAGTTGAAGCTGACGGACGCCTCCTTCTGTGATCCAGGTACTCCTCTCATCTCTTCAACTCCTCTCAGATCGACCTCTGTTCTACAGTTTTGAACTTGTGCGTCTCTTTTAGCATTGATTGAACTATTAAATGGTTATTGTAATCACTGGTTCGTCGATGGGGACTCCATTTCGTTGTCGAATGCGGATTATAAATGCAATTACGTTTGGATTTTTGGTAGTGACTGTAGTATTTTAGCAACGGATTTTCAATGTGTTGGAGTTTTTGCTTTTGGTTTGCTTGTTTTCGTAGACATGTTTTGGATGCGATGATCAAGGATAGATTTTAACGTTTTTGTGGTTTTTTTTTCCTCTCTTTCTCTGCTTCATCTGGAAATCATATGAAGCTTTTAATTTGGAAGGATGGTGAGAATTAGTGTCTTGAACGACGCTCTTAAGAGCATGTACAATGCAGAGAAGAGGGGGAAACGACAGGTCATGATCAGGCCTTCCTCTAAAGTGATCATCAAGTTTCTTATGGTTATGCAGAAGCACGGTTTGATTGCTTACTTCACCACCTCTTTGATTTGACTTCATGGCAGCAGTTTCTCCCGAGGTCCTGATTTTTATTAATTTTTGTTTTCATAGGATATATTGGGGAATTTGAGTATGTCGACGATCATAGATCTGGAAAAATTGTTGTTGAACTCAACGGTAGGCTGAACAAGTGTGGGGTTATTAGTCCTCGTTTTGATGTGGGTGTCAAGGAAATCGAAGGCTGGACTGCTAGGCTGCTCCCTTCCAGACAGGTTTGTTTTCAAAATCTGTTAATTTTCTAAAACGTAATACTTGAGAGTTTTGACTCTCCAAATTTACCTGTAATGGATTCTCGACTCTTAGAATGATCTTTTAGAGGGTGAATCAGTCTACTTATGTAATGGATTAGATTCGTATATTTCCAATGGCTGCAAAGTTCATATTGCATTGCTCTAAACTAGCAGTGCTTAGTTCTGCAAATGGTTCTGTAATCTTATTTATAAAATTCATGTCTGCAGTTTGGATTCATTGTGCTGACAACATCTGCGGGAATTATGGATCATGAAGAGGCTAGAAGGAAGAACGTTGGAGGGAAAGTCCTTGGTTTCTTCTATTGAACATGGTTTTGAGCCACACCCATTATGGAATTTTGACATAGCTTTCGCATAGTACTATATTTTCTCGGTAAAGAAAGATCTTATCCTGTAATAACTAGATTTTGTGTTGCCAGTAATTTAATTCCAAGATAATTTGATTGTTTTGGTCAAGACATTTTGGTTTTTTTAAATTATATTGGAAGAGAACCATTGCTTTTTGAATCCCTCAAGTGTCTTTCTATTGGCACCCAACACTTTGTTCTCTGTTACATTTAAGTTCTGAAGTAATATCAAATTTTGTTTGAGCAGGCCGATTTAAAAGCTGTGGCTTTTATTTTATTCTTTGTTTCCGATGTGAATGACCGATAGTGGTTATCTAATTAAAATGCCTATTGAGCATTTTAGTATTAATGTCTGGTGTTTTTTTGGTAGGTTGAGATTAGTGTCGAATCTAGAAAAGTTTTGGGAGTAATTATAATTCAATCCCAAACCCAGATCAATTTGGAATGAGATTTTGAGATAAAGAACAAGTTATGCTTCAATCTGTATCAAAATTGGACAACAAACTCATATTTTGATCAAATTCACACAAATTATCACGTTTACTTCAGAAAATGTTCGTATGTAACAAGAGACAAGATCAAGACTCAAGACTGGTAGACCATTAAGATTGATTGAAGCTCCAT

mRNA sequence

TTTGTTCATAGTTGAAGCTGACGGACGCCTCCTTCTGTGATCCAGGTACTCCTCTCATCTCTTCAACTCCTCTCAGATCGACCTCTGTTCTACAGTTTTGAACTTGTGCGTCTCTTTTAGCATTGATTGAACTATTAAATGGTTATTGTAATCACTGGTTCGTCGATGGGGACTCCATTTCGTTGTCGAATGCGGATTATAAATGCAATTACGTTTGGATTTTTGGTAGTGACTGTAGTATTTTAGCAACGGATTTTCAATGTGTTGGAGTTTTTGCTTTTGGTTTGCTTGTTTTCGTAGACATGTTTTGGATGCGATGATCAAGGATAGATTTTAACGTTTTTGTGGTTTTTTTTTCCTCTCTTTCTCTGCTTCATCTGGAAATCATATGAAGCTTTTAATTTGGAAGGATGGTGAGAATTAGTGTCTTGAACGACGCTCTTAAGAGCATGTACAATGCAGAGAAGAGGGGGAAACGACAGGTCATGATCAGGCCTTCCTCTAAAGTGATCATCAAGTTTCTTATGGTTATGCAGAAGCACGGATATATTGGGGAATTTGAGTATGTCGACGATCATAGATCTGGAAAAATTGTTGTTGAACTCAACGGTAGGCTGAACAAGTGTGGGGTTATTAGTCCTCGTTTTGATGTGGGTGTCAAGGAAATCGAAGGCTGGACTGCTAGGCTGCTCCCTTCCAGACAGTTTGGATTCATTGTGCTGACAACATCTGCGGGAATTATGGATCATGAAGAGGCTAGAAGGAAGAACGTTGGAGGGAAAGTCCTTGGTTTCTTCTATTGAACATGGTTTTGAGCCACACCCATTATGGAATTTTGACATAGCTTTCGCATAGTACTATATTTTCTCGGTAAAGAAAGATCTTATCCTGTAATAACTAGATTTTGTGTTGCCAGTAATTTAATTCCAAGATAATTTGATTGTTTTGGTCAAGACATTTTGGTTTTTTTAAATTATATTGGAAGAGAACCATTGCTTTTTGAATCCCTCAAGTGTCTTTCTATTGGCACCCAACACTTTGTTCTCTGTTACATTTAAGTTCTGAAGTAATATCAAATTTTGTTTGAGCAGGCCGATTTAAAAGCTGTGGCTTTTATTTTATTCTTTGTTTCCGATGTGAATGACCGATAGTGGTTATCTAATTAAAATGCCTATTGAGCATTTTAGTATTAATGTCTGGTGTTTTTTTGGTAGGTTGAGATTAGTGTCGAATCTAGAAAAGTTTTGGGAGTAATTATAATTCAATCCCAAACCCAGATCAATTTGGAATGAGATTTTGAGATAAAGAACAAGTTATGCTTCAATCTGTATCAAAATTGGACAACAAACTCATATTTTGATCAAATTCACACAAATTATCACGTTTACTTCAGAAAATGTTCGTATGTAACAAGAGACAAGATCAAGACTCAAGACTGGTAGACCATTAAGATTGATTGAAGCTCCAT

Coding sequence (CDS)

ATGGTGAGAATTAGTGTCTTGAACGACGCTCTTAAGAGCATGTACAATGCAGAGAAGAGGGGGAAACGACAGGTCATGATCAGGCCTTCCTCTAAAGTGATCATCAAGTTTCTTATGGTTATGCAGAAGCACGGATATATTGGGGAATTTGAGTATGTCGACGATCATAGATCTGGAAAAATTGTTGTTGAACTCAACGGTAGGCTGAACAAGTGTGGGGTTATTAGTCCTCGTTTTGATGTGGGTGTCAAGGAAATCGAAGGCTGGACTGCTAGGCTGCTCCCTTCCAGACAGTTTGGATTCATTGTGCTGACAACATCTGCGGGAATTATGGATCATGAAGAGGCTAGAAGGAAGAACGTTGGAGGGAAAGTCCTTGGTTTCTTCTATTGA

Protein sequence

MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY
Homology
[Close]
BLAST of Carg12338 vs. NCBI nr
Match: XP_022949003.1 (40S ribosomal protein S15a-1-like [Cucurbita moschata] >XP_022965015.1 40S ribosomal protein S15a-1-like [Cucurbita moschata] >XP_022965016.1 40S ribosomal protein S15a-1-like [Cucurbita moschata] >XP_022997822.1 40S ribosomal protein S15a-1-like [Cucurbita maxima] >XP_022970479.1 40S ribosomal protein S15a-1-like [Cucurbita maxima] >XP_022970480.1 40S ribosomal protein S15a-1-like [Cucurbita maxima] >XP_023523191.1 40S ribosomal protein S15a-1-like [Cucurbita pepo subsp. pepo] >XP_023520313.1 40S ribosomal protein S15a-1-like [Cucurbita pepo subsp. pepo] >XP_023520314.1 40S ribosomal protein S15a-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.2 bits (679), Expect = 6.0e-68
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. NCBI nr
Match: XP_013457334.1 (40S ribosomal protein S15a-1 [Medicago truncatula] >XP_013469871.1 40S ribosomal protein S15a-1 [Medicago truncatula] >AFK33558.1 unknown [Medicago truncatula] >AFK40580.1 unknown [Medicago truncatula] >KEH31365.1 ribosomal protein S8 [Medicago truncatula] >KEH43909.1 ribosomal protein S8 [Medicago truncatula])

HSP 1 Score: 264.6 bits (675), Expect = 1.7e-67
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. NCBI nr
Match: XP_022134546.1 (40S ribosomal protein S15a-1 [Momordica charantia] >XP_022143687.1 40S ribosomal protein S15a-1 [Momordica charantia] >XP_022938588.1 40S ribosomal protein S15a-1 [Cucurbita moschata] >XP_022938589.1 40S ribosomal protein S15a-1 [Cucurbita moschata] >XP_022993711.1 40S ribosomal protein S15a-1 [Cucurbita maxima] >XP_023549602.1 40S ribosomal protein S15a-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.6 bits (675), Expect = 1.7e-67
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. NCBI nr
Match: XP_004503959.1 (PREDICTED: 40S ribosomal protein S15a-1-like [Cicer arietinum] >XP_012471400.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium raimondii] >XP_012471401.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium raimondii] >XP_012454453.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium raimondii] >XP_012454454.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium raimondii] >XP_012454455.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium raimondii] >XP_012454456.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium raimondii] >XP_012465200.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium raimondii] >XP_012465201.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium raimondii] >XP_015874044.1 40S ribosomal protein S15a-1 [Ziziphus jujuba] >XP_015876944.1 40S ribosomal protein S15a-1 [Ziziphus jujuba] >XP_016755983.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium hirsutum] >XP_016755985.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium hirsutum] >XP_016703164.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium hirsutum] >XP_016703165.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium hirsutum] >XP_016740576.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium hirsutum] >XP_016740577.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium hirsutum] >XP_017638506.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium arboreum] >XP_017638507.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium arboreum] >XP_017643586.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium arboreum] >XP_017643587.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium arboreum] >XP_017646955.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium arboreum] >XP_017646956.1 PREDICTED: 40S ribosomal protein S15a-1 [Gossypium arboreum] >XP_018836004.1 PREDICTED: 40S ribosomal protein S15a-1 [Juglans regia] >XP_018857112.1 PREDICTED: 40S ribosomal protein S15a-1 [Juglans regia] >XP_018857113.1 PREDICTED: 40S ribosomal protein S15a-1 [Juglans regia] >XP_018814546.1 PREDICTED: 40S ribosomal protein S15a-1 [Juglans regia] >XP_019420128.1 PREDICTED: 40S ribosomal protein S15a-1 [Lupinus angustifolius] >XP_022854218.1 40S ribosomal protein S15a-1 [Olea europaea var. sylvestris] >XP_022854219.1 40S ribosomal protein S15a-1 [Olea europaea var. sylvestris] >XP_022854220.1 40S ribosomal protein S15a-1 [Olea europaea var. sylvestris] >XP_022885610.1 40S ribosomal protein S15a-1 [Olea europaea var. sylvestris] >XP_022885611.1 40S ribosomal protein S15a-1 [Olea europaea var. sylvestris] >XP_022886031.1 40S ribosomal protein S15a-1 [Olea europaea var. sylvestris] >XP_022886032.1 40S ribosomal protein S15a-1 [Olea europaea var. sylvestris] >KHG06648.1 40S ribosomal S15a-1 -like protein [Gossypium arboreum] >KHG14272.1 40S ribosomal S15a-1 -like protein [Gossypium arboreum] >KJB20163.1 hypothetical protein B456_003G136100 [Gossypium raimondii] >KJB20164.1 hypothetical protein B456_003G136100 [Gossypium raimondii] >KJB20166.1 hypothetical protein B456_003G136100 [Gossypium raimondii] >KJB20167.1 hypothetical protein B456_003G136100 [Gossypium raimondii] >KJB73329.1 hypothetical protein B456_011G230200 [Gossypium raimondii] >KJB73331.1 hypothetical protein B456_011G230200 [Gossypium raimondii] >OIV95873.1 hypothetical protein TanjilG_06849 [Lupinus angustifolius] >PPD75127.1 hypothetical protein GOBAR_DD27935 [Gossypium barbadense] >PPD94715.1 hypothetical protein GOBAR_DD08251 [Gossypium barbadense] >PPR92886.1 hypothetical protein GOBAR_AA27787 [Gossypium barbadense] >PPS02075.1 hypothetical protein GOBAR_AA18583 [Gossypium barbadense] >PPS10913.1 hypothetical protein GOBAR_AA09717 [Gossypium barbadense] >PPS16713.1 hypothetical protein GOBAR_AA03867 [Gossypium barbadense] >PSR93083.1 40S ribosomal protein S15a-1 [Actinidia chinensis var. chinensis] >PSS33294.1 40S ribosomal protein S15a-1 [Actinidia chinensis var. chinensis])

HSP 1 Score: 263.5 bits (672), Expect = 3.9e-67
Identity = 127/130 (97.69%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. NCBI nr
Match: XP_004513036.1 (PREDICTED: 40S ribosomal protein S15a-1-like [Cicer arietinum] >XP_004970511.1 40S ribosomal protein S15a-1 [Setaria italica] >XP_022680714.1 40S ribosomal protein S15a-1 [Setaria italica] >XP_025818966.1 40S ribosomal protein S15a-1-like [Panicum hallii] >XP_025818967.1 40S ribosomal protein S15a-1-like [Panicum hallii] >PUZ54064.1 hypothetical protein GQ55_5G099500 [Panicum hallii var. hallii] >PVH37821.1 hypothetical protein PAHAL_5G097800 [Panicum hallii] >RCV17432.1 hypothetical protein SETIT_3G219200v2 [Setaria italica] >RCV17433.1 hypothetical protein SETIT_3G219200v2 [Setaria italica] >RCV28047.1 hypothetical protein SETIT_5G374600v2 [Setaria italica])

HSP 1 Score: 263.5 bits (672), Expect = 3.9e-67
Identity = 127/130 (97.69%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHR+GK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. TAIR10
Match: AT1G07770.1 (ribosomal protein S15A)

HSP 1 Score: 263.5 bits (672), Expect = 7.1e-71
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. TAIR10
Match: AT5G59850.1 (Ribosomal protein S8 family protein)

HSP 1 Score: 263.5 bits (672), Expect = 7.1e-71
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. TAIR10
Match: AT3G46040.1 (ribosomal protein S15A D)

HSP 1 Score: 263.1 bits (671), Expect = 9.2e-71
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVRISVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. TAIR10
Match: AT2G39590.1 (Ribosomal protein S8 family protein)

HSP 1 Score: 245.4 bits (625), Expect = 2.0e-65
Identity = 118/130 (90.77%), Postives = 124/130 (95.38%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFEYVDDHRSGK
Sbjct: 7   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 66

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFG+IVLTTSAGIMDHEEAR+KN
Sbjct: 67  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKN 126

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 127 VGGKVLGFFY 136

[Close]
BLAST of Carg12338 vs. TAIR10
Match: AT4G29430.1 (ribosomal protein S15A E)

HSP 1 Score: 148.7 bits (374), Expect = 2.5e-36
Identity = 67/125 (53.60%), Postives = 94/125 (75.20%), Query Frame = 0 

Query: 6   VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGKIVVEL 65
           +LNDAL+++ NAE+RGK  V ++P S V+  FL +M++ GYI  F+  D HR G+I V+L
Sbjct: 5   ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64

Query: 66  NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKV 125
            GR+N C  ++ R DV  KEIE +T R LP+RQ+G++V+TT  GI+DHEEA ++NVGG+V
Sbjct: 65  QGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQV 124

Query: 126 LGFFY 131
           LGFFY
Sbjct: 125 LGFFY 129

[Close]
BLAST of Carg12338 vs. Swiss-Prot
Match: sp|P42798|R15A1_ARATH (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 263.5 bits (672), Expect = 1.3e-69
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. Swiss-Prot
Match: sp|Q9LX88|R15A4_ARATH (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=3)

HSP 1 Score: 263.1 bits (671), Expect = 1.7e-69
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVRISVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. Swiss-Prot
Match: sp|Q00332|RS15A_BRANA (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 261.9 bits (668), Expect = 3.7e-69
Identity = 127/130 (97.69%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVRISVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. Swiss-Prot
Match: sp|Q9AT34|RS15A_DAUCA (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-68
Identity = 125/130 (96.15%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFLMVMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. Swiss-Prot
Match: sp|O80646|R15A3_ARATH (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 245.4 bits (625), Expect = 3.6e-64
Identity = 118/130 (90.77%), Postives = 124/130 (95.38%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFEYVDDHRSGK
Sbjct: 1   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFG+IVLTTSAGIMDHEEAR+KN
Sbjct: 61  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. TrEMBL
Match: tr|I3SJY8|I3SJY8_MEDTR (Ribosomal protein S8 OS=Medicago truncatula OX=3880 GN=25485233 PE=2 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.2e-67
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. TrEMBL
Match: tr|D7KHV6|D7KHV6_ARALL (RPS15A OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_323263 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.6e-67
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. TrEMBL
Match: tr|A0A2R6PL82|A0A2R6PL82_ACTCH (40S ribosomal protein S15a-1 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03682 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.6e-67
Identity = 127/130 (97.69%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. TrEMBL
Match: tr|A0A2I4HLY0|A0A2I4HLY0_9ROSI (40S ribosomal protein S15a-1 OS=Juglans regia OX=51240 GN=LOC109019296 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.6e-67
Identity = 127/130 (97.69%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Carg12338 vs. TrEMBL
Match: tr|A0A1U8NNK5|A0A1U8NNK5_GOSHI (40S ribosomal protein S15a-1 OS=Gossypium hirsutum OX=3635 GN=LOC107950276 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.6e-67
Identity = 127/130 (97.69%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

The following BLAST results are available for this feature:
BLAST of Carg12338 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949003.16.0e-68100.0040S ribosomal protein S15a-1-like [Cucurbita moschata] >XP_022965015.1 40S ribos... [more]
XP_013457334.11.7e-6798.4640S ribosomal protein S15a-1 [Medicago truncatula] >XP_013469871.1 40S ribosomal... [more]
XP_022134546.11.7e-6798.4640S ribosomal protein S15a-1 [Momordica charantia] >XP_022143687.1 40S ribosomal... [more]
XP_004503959.13.9e-6797.69PREDICTED: 40S ribosomal protein S15a-1-like [Cicer arietinum] >XP_012471400.1 P... [more]
XP_004513036.13.9e-6797.69PREDICTED: 40S ribosomal protein S15a-1-like [Cicer arietinum] >XP_004970511.1 4... [more]
BLAST of Carg12338 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07770.17.1e-7198.46ribosomal protein S15A[more]
AT5G59850.17.1e-7198.46Ribosomal protein S8 family protein[more]
AT3G46040.19.2e-7198.46ribosomal protein S15A D[more]
AT2G39590.12.0e-6590.77Ribosomal protein S8 family protein[more]
AT4G29430.12.5e-3653.60ribosomal protein S15A E[more]
BLAST of Carg12338 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P42798|R15A1_ARATH1.3e-6998.4640S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=... [more]
sp|Q9LX88|R15A4_ARATH1.7e-6998.4640S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=... [more]
sp|Q00332|RS15A_BRANA3.7e-6997.6940S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3[more]
sp|Q9AT34|RS15A_DAUCA1.8e-6896.1540S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3[more]
sp|O80646|R15A3_ARATH3.6e-6490.7740S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=... [more]
BLAST of Carg12338 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|I3SJY8|I3SJY8_MEDTR1.2e-6798.46Ribosomal protein S8 OS=Medicago truncatula OX=3880 GN=25485233 PE=2 SV=1[more]
tr|D7KHV6|D7KHV6_ARALL2.6e-6798.46RPS15A OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_323263 PE=3 SV... [more]
tr|A0A2R6PL82|A0A2R6PL82_ACTCH2.6e-6797.6940S ribosomal protein S15a-1 OS=Actinidia chinensis var. chinensis OX=1590841 GN... [more]
tr|A0A2I4HLY0|A0A2I4HLY0_9ROSI2.6e-6797.6940S ribosomal protein S15a-1 OS=Juglans regia OX=51240 GN=LOC109019296 PE=3 SV=1[more]
tr|A0A1U8NNK5|A0A1U8NNK5_GOSHI2.6e-6797.6940S ribosomal protein S15a-1 OS=Gossypium hirsutum OX=3635 GN=LOC107950276 PE=3 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR035987Ribosomal_S8_sf
IPR000630Ribosomal_S8
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12338-RACarg12338-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000630Ribosomal protein S8PFAMPF00410Ribosomal_S8coord: 7..130
e-value: 2.4E-22
score: 79.1
IPR000630Ribosomal protein S8PANTHERPTHR1175840S RIBOSOMAL PROTEIN S15Acoord: 1..130
IPR000630Ribosomal protein S8PROSITEPS00053RIBOSOMAL_S8coord: 100..117
IPR000630Ribosomal protein S8HAMAPMF_01302_ARibosomal_S8_Acoord: 2..130
score: 32.425
NoneNo IPR availableGENE3DG3DSA:3.30.1490.10coord: 70..130
e-value: 2.7E-35
score: 122.1
NoneNo IPR availableGENE3DG3DSA:3.30.1370.30coord: 1..69
e-value: 2.4E-39
score: 134.9
NoneNo IPR availablePANTHERPTHR11758:SF16RIBOSOMAL PROTEIN S15Acoord: 1..130
IPR035987Ribosomal protein S8 superfamilySUPERFAMILYSSF56047Ribosomal protein S8coord: 4..130

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12338Cla008282Watermelon (97103) v1carwmB0440
Carg12338Csa1G481220Cucumber (Chinese Long) v2carcuB0471
Carg12338MELO3C020704Melon (DHL92) v3.5.1carmeB0449
Carg12338ClCG03G001910Watermelon (Charleston Gray)carwcgB0436
Carg12338CSPI01G22470Wild cucumber (PI 183967)carcpiB0476
Carg12338Cucsa.213460Cucumber (Gy14) v1carcgyB0512
Carg12338CmaCh01G005660Cucurbita maxima (Rimu)carcmaB0613
Carg12338CmaCh13G001560Cucurbita maxima (Rimu)carcmaB0610
Carg12338CmoCh01G005930Cucurbita moschata (Rifu)carcmoB0596
Carg12338CmoCh13G001600Cucurbita moschata (Rifu)carcmoB0594
Carg12338Lsi02G013940Bottle gourd (USVL1VR-Ls)carlsiB403
Carg12338Cp4.1LG20g08830Cucurbita pepo (Zucchini)carcpeB0620
Carg12338Cp4.1LG02g13100Cucurbita pepo (Zucchini)carcpeB0622
Carg12338CsGy1G022050Cucumber (Gy14) v2carcgybB0448
Carg12338MELO3C020704.2Melon (DHL92) v3.6.1carmedB0451
Carg12338CsaV3_1G033650Cucumber (Chinese Long) v3carcucB0472
Carg12338Cla97C03G052920Watermelon (97103) v2carwmbB0467
Carg12338Bhi08G000332Wax gourdcarwgoB0533
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg12338Carg21032Silver-seed gourdcarcarB447
The following block(s) are covering this gene:
GeneOrganismBlock
Carg12338Wax gourdcarwgoB0529
Carg12338Wax gourdcarwgoB0530
Carg12338Silver-seed gourdcarcarB332
Carg12338Silver-seed gourdcarcarB333
Carg12338Silver-seed gourdcarcarB353
Carg12338Silver-seed gourdcarcarB354
Carg12338Cucumber (Gy14) v2carcgybB0454
Carg12338Cucurbita maxima (Rimu)carcmaB0614
Carg12338Cucurbita maxima (Rimu)carcmaB0615
Carg12338Cucurbita maxima (Rimu)carcmaB0616
Carg12338Cucurbita moschata (Rifu)carcmoB0597
Carg12338Cucurbita moschata (Rifu)carcmoB0598
Carg12338Cucurbita moschata (Rifu)carcmoB0599
Carg12338Cucurbita pepo (Zucchini)carcpeB0617
Carg12338Cucurbita pepo (Zucchini)carcpeB0618
Carg12338Cucurbita pepo (Zucchini)carcpeB0624
Carg12338Cucurbita pepo (Zucchini)carcpeB0625
Carg12338Wild cucumber (PI 183967)carcpiB0480
Carg12338Cucumber (Chinese Long) v2carcuB0476
Carg12338Cucumber (Chinese Long) v3carcucB0478
Carg12338Melon (DHL92) v3.5.1carmeB0446
Carg12338Bottle gourd (USVL1VR-Ls)carlsiB400
Carg12338Bottle gourd (USVL1VR-Ls)carlsiB401
Carg12338Melon (DHL92) v3.5.1carmeB0447
Carg12338Melon (DHL92) v3.5.1carmeB0448
Carg12338Melon (DHL92) v3.6.1carmedB0448
Carg12338Melon (DHL92) v3.6.1carmedB0450
Carg12338Watermelon (Charleston Gray)carwcgB0433
Carg12338Watermelon (Charleston Gray)carwcgB0435
Carg12338Watermelon (97103) v1carwmB0442
Carg12338Watermelon (97103) v1carwmB0444
Carg12338Watermelon (97103) v2carwmbB0464