Carg08764 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08764
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Polyadenylate-binding protein
Location	Cucurbita_argyrosperma_scaffold_057 : 913225 .. 918720 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTCCTCATTTTATCTTCCATTTGCAATATATCGCACACCCATGGAAGGCTGCTGCCGGTGGAGCATCCCATCGTCGGAAATCATCACCGCAAAATCGTTGAAACTGCCGGTGTTGCTCCTCTCGGGTCGAGGCCACCGGCATTTCAACGCACTACCTCCTCTCCTGGCGACGGCGACGCCGAGGTGCTAGGCGGCGACTTCCGTCCGACCACCCCGGGCCACAGTCCTGGAGTTGGCCACTCTCTTGCACCAGCAAGCCACGTGGATTCGAAAATCCATTAGAATTTATGATCATTTATATAGTTATATGGTATATTAATCATGGTATTCGTAGTAACTTAGTTTAGTTGTATATTCATATTACCAACTGCATGTTCTATCATTATGTATGATTATCTGTTAATTAATGAAGCTTGATTTTATTATTATTTTCTTTTATTTATTTATTTTTTAAGCTATTTCCATAATTAATAAAAATAAATTAGTGTCCTATGGTTAAGAGACAAAAGTAAGATATTACTTTTTGAAACAAAACCATATTCTTTTTTTATTTAATTTATGAATTTATTTATAGGTAGATTGGAGGAATAAAATTACACTAAAATATGTATTAGTCTAGTTATTGACTCTAACTTATCCAAACCAATTATTTTGTTTAAAATTTAAAATGTTAAATTACATTTATTAATGGATTTCTTTTTATACAAAACAAAAATTGCTTAATTATTTAATATTTATTCTGGGACATATTCGACTTAATACAAATTTAGTAACTTAATATTATGTATATAATTGTTATAGGAATATAGTTTAACCAACACAATATTAAAAAGATCAATTTCGAGGATTTTTATAGAAATTTAAAACTTATATTTTAGTTTAATTTATTGAATAAAATTTATATTAATGACTTTAATTTTATATTTTTTTATCAAATAACTTTTATATTATAGAGCTTTAAAAAATTATGAGATAATCTAATAAATTATGATAGTATTAAGCTTTAATCCAACAAAAAATTGGGTTAATTGTATAAAAAGTTAAAACATGATTAAATTATTTAGAAAAAAAAAAGTACAAAATTTGAAATTTATTTGATAAACTTATACAAAATAATTTTTTTCTAAAATTAAAAATAATAGAAAAACTTTTTAGTAATTTAAGAGTTGATGGTTACAGGATAATTGGCGGCGGATGGAGGCAAAGGGCGGGGAGAGGAAACTGGAATGAACAGCTGAGATTAAGCGTGTTCCTTAATCGTAGGGTGTATATAGACAGCCCAAAAACCTTCCGGTTTGTATTTTCGTCATCCTCATCCTCAGGCTTAGACCCTAATCCAGTCCTCCGCTTTCGGCTTCTTTGGGTTTCCCTTTTTTGCTCTCAGATTCGGATTCTTTTTCCTCTCATTCCATTCAGATTCTTTTACCCTTTTCAGTAAGGGTGTACATTAAAATCTGCTCCATTCTCCTTGTTAATACGGAGGAAGATAAGATGCAAAGCAACGGTTCTGATTCGCAGCCGCAAGAACCAAATCAGCGCCACCAGCAGCCGCAGTCGTGGATGTCAATGCAGTACCCGCCGCCGGCTATGGTAATGCCGCACCATATGATGACGCCTCCGCATTACATGGCGCCGCCGCTTCCGCCGCCGCCGTATATGCATTATCACCCCCAATATCAGCATCACCATCTCCCTATTCAGCATTCGCAGCCGCTACAGGGATCTGGTGGCGAAAACAAAACGATTTGGGTGGGTGACTTGCATCATTGGATGAACGAGAGTTACCTCCATAACTGCTTTGCTTCCATTGGCGAGGTTCAATTTTCTCTCTTCTTTTTCACTCATCTTTACGTTTATTATCGATGATGATTATTTGCTGATTTTCTGGAATCGTTAAAGTTCTCATATAAATCAATCTCTTTTTATTTTTTTATTTCTTTATGAAATGATTCATTCTCTTCCTGAACATAAGGCTAGAAATATTGAATAATTCCCTTTTCCGATTCATCCAAACAGTTGTAAACGTCTACCAGTTTCTAGTTCTGATGATTTTTCTTTTTGGAGGTTTGCGTACTTCATTGTCGTTGTGCAATTTGAACACAGAAGTGCAGAACCAAATGACAATTATAAGTTTGATCAAACATTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAAAAAAAGGTTTTTGCTACTTTTGAGAAAGTGAGAATTTATTGGAGTTTTTTGTTGCGATTGGTTTACATTTTCTGATATTAGTAGGTTAGAGTATAGAATCTGCGTAAAAATGCAGCCGTATATTTTGCCAAAATGTTGTTTTGGCATTTGACAAATTTTAATGAGAGCGAATTGGCAACTGGTAAATGGTAAAGCAACATAGAAGCATGTTATAGGACTTCTTAGTCCTGTCTAGAATGGCTTTATCTTCTAGCCTCTCAAATTTACCACCTGTTGAATATGGTAAAGCAACATAAAAGCATGTTATAGGACTTCTTAGTCCTGTCTAGAATGGCTTTATCTTCTAGCCTCTCAAATTTACCACCTGTTGAATATTGTGAAAAGGGTATGAAGAAGTAATGGAAGATCACATTCTCTAGCAATTGACATTGACATTTTGTTTCTGAAGGAGGTTTCTTTTATAGCTTTTTATATTTATTGCTGTGTATTCAGCTATGTACATGGATTTTCTAGCTACTCTATCTCGTTCTTTTCCCTACTCTTTCGAACCAAATAATAAAAATGAATCTAATGACATTATCCCAACTGTTTCCAAACAATCTCTTTTGTTGAAGAATCTTGAATTGTTCTTAGTTTGGCATGATCATTTTGAACATTGATCGTTTTATTTCCTGTATGATGCAGATTGCATCGATCAAGATCATTCGTAATAAGCAAAGTGGTTTGTCTGAGGGGTATGGGTTTGTAGAATTTTTTGCCCATGCAACAGCTGACAAAGCTCTTCAGAACTATGCTGGAGTGCTCATGCCAAGTACAGAGCAGCCTTTCCGCTTGAATTGGGCGACATTTAGCACCGGTGACAAACGATCAGATAATGATCCCGATCTTTCTATTTTTGTTGGTGACTTAGCTGCAGATGTTACTGATGCTCTGTTGTACGATACATTTTCTAGTAAATTTCCTTCTGTTAAAGCAGCAAAAGTTGTCATTGATGCGAATACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGTCTGAAATGAATGGTGTATATTGTTCGAGCAGACCTATGCGCATTGGTGCAGCAACGCCTAGAAAGTCTTCTGGATATCAGCCACAGAATTCTTCACAAGGTATATTTAAATTGTATGGTTACAATGTAGTGTGCATAGCCTAAAACCACTTCCAAGAGGGATTAGGGTTAGTCTTTGGGGAGGACGTGCAATTCTGGAATAAGTAAAGATATGGAGGCTTTCTACTTTTTCGGGGGCATTTGGTTCAAGGCTGGGGGTTATGAATCAAAAAGGGCTGTGAAAATGAAAACTATAATGCTAACAAAGAAATATGTGTTGTGCATTCCTGTCTATCAATCAAAAAGGGTTTGGATTTAATTTTTTGAATGCATGTGTTCTTAGAGTTTACTCATGGTTGTACACTTCCCTACCCCTTTTGGACTGCTCATGCATATGTTGTCCTCTGTTTATTATAGGAGGATATTCAACAAATGGTCCCTTTAGCCAAGGACTCCAATCTGAAGGAGATTCTGCAAATACAACTGTAAGTTGCTTTGGTTACTTTTATCTGCACAGCTAGAAATTCCACGTATTCTTGGGTTTAACCTGAGCTTTCCTTTTAGATATTTGTTGGAGGGCTTGATCCTAATGTCACCGATGAAGATCTGAGACAACCTTTCTCACAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTTCAATTTGCCAATAGGTAAAAAGTTTGTGATCAGATTTTCCTTTCATATAAACCATGAATTAACAGTATCTGTCTGGTTATTGGTTTTGTCAATTTGTTGATTTTTACTAAATTCTGTCACATATTCTTCTCAATTTTCCTTTGCAGAAATGATGCTGAAGAGGCCTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTATTCGTCTTTCTTGGGGCCGAAATCCAGCAAATAAGCAGGCAAATTACCCTTTTCTCCTAGTGTGAAAATATTAACAAAAAACTTATGCATCACTCTCTCAATTTCCATGCTTTTCCTGAAGGGCAAGGATAGGAAAACAAATAAAATGAGCTGTTTTAAGAACTTCAATTAAGTATGAACTTTTTATTTGAACCTTGTCTCAGTTATGGAATTGAATTTGGAAACACTTGGCCGGGGAAATGTTTAGTTTACATTCCTTCTTAATTCTTACCATCTGTAGCGGCCGATTTAGGTTGATAAATAGTCTTAACAGCATTTTTTCTTGCATTTGTTGAGGTGTGGCAGTTCAGAGATTTTGGTAACCAGTGGAATGGAGCTTACTACGGGGGGCACATATATGATGGCTATGGATATGGTCTGCCGCCTCACGATCCAAGTATGTATCAGGCAGCTTATGGAGCTTACACTGTATATGGAAGCCATCAACAACAAGTAATCTGAACACAGAAAAGCTCATATTAATCCTTAGGCGCTTTTCAAGTAGAACAGCTGAAGTTGCTTCAGCTTCTGGAATTCACTTGGTTTTAGATTTTTTCTTTTTTCCATATTAATCATCCTTCCATCTGCCTAGAGGAACTGAATTTTGATGACCTGAGCTAGTTCTCTCATCTTGTAGGGAATATTATATATTTATTTCATTCAGATTGATAACAAACTTATTTATTAGAATATATATATATATATATATATATATATATATATATATATATATATATATATAATGTTGCAATAGTGCATGCATGTTACACACACAATGTCTCGGTTATACCTATTCTTTGGTCAATCTTTCTGTTCATCTTTTTCAACTAGTTTAAGAGTTTCGGCCTTTCGAAATGCAGGATCGATTGTTACTAAAGTAAAATTATGTTCATTTGGTGAGAATTTTGGATGTTTTTTTTGGCATCTGAATCTTATGTTCTCTCTGTTAGAATGGATTTGTGGGTAGGTTGGTATCCTACATTAGGTATGAGTACACTACATATTGACTTTGTTGGACAGAGCAGTACACTTCTGAATCATCACCTTTTCCTTTAATATTCTTTACTGTTCAATTGCAAGTCTGCAACTTCCTTTCGATCCATGGAGATGATTCAGAAGCATTATTGAAAATTGAGTAGTGTTGCACTGCGATTGGGAATTGTAAAAGAGGCTTTTTAGATGGAAGGTGGGTGTGCCATGTCAATGTCACAGCACCGCCGTTGCCCTACGGCTACTGCAAAAGTGCAGCAGCCTGCTAAGAAAAGCATAAAGGCGTTTTAG

mRNA sequence

ATGGCCTTCCTCATTTTATCTTCCATTTGCAATATATCGCACACCCATGGAAGGCTGCTGCCGGTGGAGCATCCCATCGTCGGAAATCATCACCGCAAAATCGTTGAAACTGCCGGTGTTGCTCCTCTCGGGTCGAGGCCACCGGCATTTCAACGCACTACCTCCTCTCCTGGCGACGGCGACGCCGAGGTGCTAGGCGGCGACTTCCGTCCGACCACCCCGGGCCACAGTCCTGGAGTTGGCCACTCTCTTGCACCAGCAAGCCACATTCTTTTACCCTTTTCAGTAAGGGTGTACATTAAAATCTGCTCCATTCTCCTTGTTAATACGGAGGAAGATAAGATGCAAAGCAACGGTTCTGATTCGCAGCCGCAAGAACCAAATCAGCGCCACCAGCAGCCGCAGTCGTGGATGTCAATGCAGTACCCGCCGCCGGCTATGGTAATGCCGCACCATATGATGACGCCTCCGCATTACATGGCGCCGCCGCTTCCGCCGCCGCCGTATATGCATTATCACCCCCAATATCAGCATCACCATCTCCCTATTCAGCATTCGCAGCCGCTACAGGGATCTGGTGGCGAAAACAAAACGATTTGGGTGGGTGACTTGCATCATTGGATGAACGAGAGTTACCTCCATAACTGCTTTGCTTCCATTGGCGAGATTGCATCGATCAAGATCATTCGTAATAAGCAAAGTGGTTTGTCTGAGGGGTATGGGTTTGTAGAATTTTTTGCCCATGCAACAGCTGACAAAGCTCTTCAGAACTATGCTGGAGTGCTCATGCCAAGTACAGAGCAGCCTTTCCGCTTGAATTGGGCGACATTTAGCACCGGTGACAAACGATCAGATAATGATCCCGATCTTTCTATTTTTGTTGGTGACTTAGCTGCAGATGTTACTGATGCTCTGTTGTACGATACATTTTCTAGTAAATTTCCTTCTGTTAAAGCAGCAAAAGTTGTCATTGATGCGAATACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGTCTGAAATGAATGGTGTATATTGTTCGAGCAGACCTATGCGCATTGGTGCAGCAACGCCTAGAAAGTCTTCTGGATATCAGCCACAGAATTCTTCACAAGGAGGATATTCAACAAATGGTCCCTTTAGCCAAGGACTCCAATCTGAAGGAGATTCTGCAAATACAACTATATTTGTTGGAGGGCTTGATCCTAATGTCACCGATGAAGATCTGAGACAACCTTTCTCACAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTTCAATTTGCCAATAGAAATGATGCTGAAGAGGCCTTGCAGAAACTAAATGCAACTTTCAGAGATTTTGGTAACCAGTGGAATGGAGCTTACTACGGGGGGCACATATATGATGGCTATGGATATGGTCTGCCGCCTCACGATCCAAGTATGTATCAGGCAGCTTATGGAGCTTACACTGTATATGGAAGCCATCAACAACAACACCGCCGTTGCCCTACGGCTACTGCAAAAGTGCAGCAGCCTGCTAAGAAAAGCATAAAGGCGTTTTAG

Coding sequence (CDS)

ATGGCCTTCCTCATTTTATCTTCCATTTGCAATATATCGCACACCCATGGAAGGCTGCTGCCGGTGGAGCATCCCATCGTCGGAAATCATCACCGCAAAATCGTTGAAACTGCCGGTGTTGCTCCTCTCGGGTCGAGGCCACCGGCATTTCAACGCACTACCTCCTCTCCTGGCGACGGCGACGCCGAGGTGCTAGGCGGCGACTTCCGTCCGACCACCCCGGGCCACAGTCCTGGAGTTGGCCACTCTCTTGCACCAGCAAGCCACATTCTTTTACCCTTTTCAGTAAGGGTGTACATTAAAATCTGCTCCATTCTCCTTGTTAATACGGAGGAAGATAAGATGCAAAGCAACGGTTCTGATTCGCAGCCGCAAGAACCAAATCAGCGCCACCAGCAGCCGCAGTCGTGGATGTCAATGCAGTACCCGCCGCCGGCTATGGTAATGCCGCACCATATGATGACGCCTCCGCATTACATGGCGCCGCCGCTTCCGCCGCCGCCGTATATGCATTATCACCCCCAATATCAGCATCACCATCTCCCTATTCAGCATTCGCAGCCGCTACAGGGATCTGGTGGCGAAAACAAAACGATTTGGGTGGGTGACTTGCATCATTGGATGAACGAGAGTTACCTCCATAACTGCTTTGCTTCCATTGGCGAGATTGCATCGATCAAGATCATTCGTAATAAGCAAAGTGGTTTGTCTGAGGGGTATGGGTTTGTAGAATTTTTTGCCCATGCAACAGCTGACAAAGCTCTTCAGAACTATGCTGGAGTGCTCATGCCAAGTACAGAGCAGCCTTTCCGCTTGAATTGGGCGACATTTAGCACCGGTGACAAACGATCAGATAATGATCCCGATCTTTCTATTTTTGTTGGTGACTTAGCTGCAGATGTTACTGATGCTCTGTTGTACGATACATTTTCTAGTAAATTTCCTTCTGTTAAAGCAGCAAAAGTTGTCATTGATGCGAATACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGTCTGAAATGAATGGTGTATATTGTTCGAGCAGACCTATGCGCATTGGTGCAGCAACGCCTAGAAAGTCTTCTGGATATCAGCCACAGAATTCTTCACAAGGAGGATATTCAACAAATGGTCCCTTTAGCCAAGGACTCCAATCTGAAGGAGATTCTGCAAATACAACTATATTTGTTGGAGGGCTTGATCCTAATGTCACCGATGAAGATCTGAGACAACCTTTCTCACAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTTCAATTTGCCAATAGAAATGATGCTGAAGAGGCCTTGCAGAAACTAAATGCAACTTTCAGAGATTTTGGTAACCAGTGGAATGGAGCTTACTACGGGGGGCACATATATGATGGCTATGGATATGGTCTGCCGCCTCACGATCCAAGTATGTATCAGGCAGCTTATGGAGCTTACACTGTATATGGAAGCCATCAACAACAACACCGCCGTTGCCCTACGGCTACTGCAAAAGTGCAGCAGCCTGCTAAGAAAAGCATAAAGGCGTTTTAG

Protein sequence

MAFLILSSICNISHTHGRLLPVEHPIVGNHHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHILLPFSVRVYIKICSILLVNTEEDKMQSNGSDSQPQEPNQRHQQPQSWMSMQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHYHPQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATFRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQHRRCPTATAKVQQPAKKSIKAF

Homology

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BLAST of Carg08764 vs. NCBI nr
Match: XP_022936173.1 (polyadenylate-binding protein RBP47C-like [Cucurbita moschata])

HSP 1 Score: 691.0 bits (1782), Expect = 3.1e-195
Identity = 394/416 (94.71%), Postives = 396/416 (95.19%), Query Frame = 0


Query: 115 MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 175 XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQS 234
           XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWM+ESYLHNCFASIGEIASIKIIRNKQS
Sbjct: 61  XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEIASIKIIRNKQS 120

Query: 235 GLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 294
           GLSEGYGFVEFFAHATA+KALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV
Sbjct: 121 GLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 180

Query: 295 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 354
           GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG
Sbjct: 181 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 240

Query: 355 VYCSSRPMRIGAATPRKSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPN 414
           VYCSSRPMRIGAATPRKSSGYQ QNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPN
Sbjct: 241 VYCSSRPMRIGAATPRKSSGYQQQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPN 300

Query: 415 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT------------ 474
           VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT            
Sbjct: 301 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRLSWG 360

Query: 475 -------FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
                  FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ
Sbjct: 361 RNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 416

[Close]

BLAST of Carg08764 vs. NCBI nr
Match: XP_023535397.1 (polyadenylate-binding protein RBP47C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 683.3 bits (1762), Expect = 6.5e-193
Identity = 390/416 (93.75%), Postives = 393/416 (94.47%), Query Frame = 0


Query: 115 MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 175 XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQS 234
           XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWM+ESYLH CFASIGEI+SIKIIRNKQS
Sbjct: 61  XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMDESYLHTCFASIGEISSIKIIRNKQS 120

Query: 235 GLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 294
           GLSEGYGFVEFFAHATA+KALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV
Sbjct: 121 GLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 180

Query: 295 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 354
           GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG
Sbjct: 181 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 240

Query: 355 VYCSSRPMRIGAATPRKSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPN 414
           VYCSSRPMRIGAATPRKSSGYQ QNSSQGGYSTNGP SQGLQSEGDSANTTIFVGGLDPN
Sbjct: 241 VYCSSRPMRIGAATPRKSSGYQQQNSSQGGYSTNGPLSQGLQSEGDSANTTIFVGGLDPN 300

Query: 415 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT------------ 474
           VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT            
Sbjct: 301 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRLSWG 360

Query: 475 -------FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
                  FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMY AAYGAYTVYGSHQQQ
Sbjct: 361 RNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYHAAYGAYTVYGSHQQQ 416

[Close]

BLAST of Carg08764 vs. NCBI nr
Match: XP_022976308.1 (polyadenylate-binding protein RBP47C-like [Cucurbita maxima])

HSP 1 Score: 671.4 bits (1731), Expect = 2.5e-189
Identity = 385/416 (92.55%), Postives = 388/416 (93.27%), Query Frame = 0


Query: 115 MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 175 XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQS 234
           XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWM+ESYLH CFASIGEI+ IKIIRNKQS
Sbjct: 61  XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMDESYLHTCFASIGEISLIKIIRNKQS 120

Query: 235 GLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 294
           GLSEGYGFVEFFAHATA+KALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV
Sbjct: 121 GLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 180

Query: 295 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 354
           GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG
Sbjct: 181 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 240

Query: 355 VYCSSRPMRIGAATPRKSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPN 414
           VYCSSRPMRIGAATPRKSSGYQ QN SQG Y TNGP SQGLQSEGDSANTTIFVGGLDPN
Sbjct: 241 VYCSSRPMRIGAATPRKSSGYQQQNFSQGEYLTNGPLSQGLQSEGDSANTTIFVGGLDPN 300

Query: 415 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT------------ 474
           VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT            
Sbjct: 301 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRLSWG 360

Query: 475 -------FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
                  FRDFGNQWNG YYGGHIYDGYGYGLPPHDPSMY AAYGAYTVYGSHQQQ
Sbjct: 361 RNPANKQFRDFGNQWNGPYYGGHIYDGYGYGLPPHDPSMYHAAYGAYTVYGSHQQQ 416

[Close]

BLAST of Carg08764 vs. NCBI nr
Match: XP_022140707.1 (polyadenylate-binding protein RBP47-like [Momordica charantia])

HSP 1 Score: 619.8 bits (1597), Expect = 8.8e-174
Identity = 362/416 (87.02%), Postives = 374/416 (89.90%), Query Frame = 0


Query: 115 MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           MQSNGSDSQPQEPNQ              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 175 XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQS 234
           XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWM+ESYLHNCFASIGEI+SIK+IRNKQ+
Sbjct: 61  XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEISSIKVIRNKQT 120

Query: 235 GLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 294
           GLSEGYGFVEFFAHATA+KALQNY+G+ MP+TEQ FRLNWATFSTGDKRSDNDPDLSIFV
Sbjct: 121 GLSEGYGFVEFFAHATAEKALQNYSGMFMPNTEQAFRLNWATFSTGDKRSDNDPDLSIFV 180

Query: 295 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 354
           GDLAADVTD LLY+TFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMNG
Sbjct: 181 GDLAADVTDTLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNG 240

Query: 355 VYCSSRPMRIGAATPRKSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPN 414
           VYCSSRPMRIGAATPRKSSGYQ Q SSQGGYS+NG FSQGLQSEGDSANTTIFVGGLDPN
Sbjct: 241 VYCSSRPMRIGAATPRKSSGYQQQYSSQGGYSSNGSFSQGLQSEGDSANTTIFVGGLDPN 300

Query: 415 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT------------ 474
           VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN T            
Sbjct: 301 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLSWG 360

Query: 475 -------FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
                  FRDFGNQWNGAYYGGH+YDGYGYGLPPHDPSMY AAYGAY VYGSHQQQ
Sbjct: 361 RNPANKQFRDFGNQWNGAYYGGHMYDGYGYGLPPHDPSMYHAAYGAYPVYGSHQQQ 415

[Close]

BLAST of Carg08764 vs. NCBI nr
Match: XP_022982257.1 (polyadenylate-binding protein RBP47C-like [Cucurbita maxima])

HSP 1 Score: 619.0 bits (1595), Expect = 1.5e-173
Identity = 337/418 (80.62%), Postives = 350/418 (83.73%), Query Frame = 0


Query: 115 MQSNGSDSQPQEPNQRHQQP--QSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           MQ+NGSDSQP E NQRHQQP  +SWM +QY          XXXXXXX      XXXXXXX
Sbjct: 1   MQNNGSDSQPPETNQRHQQPPQKSWMPLQY-RPPAMVMPHXXXXXXXYIAPPLXXXXXXX 60

Query: 175 XXXXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNK 234
           XXXXX         QPLQGSGGENKTIWVGDL HWM+E+YLHNCF S GEI+SIKIIRNK
Sbjct: 61  XXXXXPHHLPMQHSQPLQGSGGENKTIWVGDLQHWMDETYLHNCFGSFGEISSIKIIRNK 120

Query: 235 QSGLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSI 294
           Q+GLSEGYGFVEFFAHATA+KALQNY+G+ MP TEQ FRLNWATFSTGDKRSDNDPDLSI
Sbjct: 121 QTGLSEGYGFVEFFAHATAEKALQNYSGMCMPDTEQAFRLNWATFSTGDKRSDNDPDLSI 180

Query: 295 FVGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEM 354
           FVGDLAADVTD LLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EM
Sbjct: 181 FVGDLAADVTDTLLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEM 240

Query: 355 NGVYCSSRPMRIGAATPRKSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLD 414
           NGV+CSSRPMRIGAATPRKSSGYQ Q +S G YSTNG FSQG QSEGDSANTTIFVGGLD
Sbjct: 241 NGVHCSSRPMRIGAATPRKSSGYQQQRASLGAYSTNGAFSQGFQSEGDSANTTIFVGGLD 300

Query: 415 PNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT---------- 474
           PNV DEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN T          
Sbjct: 301 PNVNDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVVGKQTVRLS 360

Query: 475 ---------FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
                    FRDFGNQWNGAYYGGHIYDGYGYGLPP DPSMY AAYGAY  YGSHQQQ
Sbjct: 361 WGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLPPQDPSMYHAAYGAYPFYGSHQQQ 417

[Close]

BLAST of Carg08764 vs. TAIR10
Match: AT1G47500.1 (RNA-binding protein 47C')

HSP 1 Score: 427.2 bits (1097), Expect = 1.5e-119
Identity = 223/341 (65.40%), Postives = 264/341 (77.42%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFASI--GEIASIKIIRNKQSGLSEGYGFVEFFAHATA 253
           GENKTIWVGDL +WM+E+YL++ F S    EI S+K+IRNK +G SEGYGFVEF +H  A
Sbjct: 100 GENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVA 159

Query: 254 DKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDALLYDTF 313
           DK LQ + G  MP+T+QPFRLNWA+FSTG+KR +N+ PDLSIFVGDLA DV+DALL++TF
Sbjct: 160 DKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETF 219

Query: 314 SSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPR 373
           S K+PSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AM+EMNGV CSSR MRIG ATPR
Sbjct: 220 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 279

Query: 374 KSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEI 433
           K++GYQ     QGGY  +G F+   +SEGD+ NTTIFVGGLD +VTDEDL+QPFS++GEI
Sbjct: 280 KTNGYQ----QQGGYMPSGAFT---RSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEI 339

Query: 434 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATF-------------------RD-FGNQW 493
           VSVKIPVGKGCGFVQF NR +AEEAL+KLN T                    RD +GNQW
Sbjct: 340 VSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 399

Query: 494 NGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
              YYGG  Y+GYGY +P  DP MY AA   Y +YG HQQQ
Sbjct: 400 VDPYYGGQFYNGYGYMVPQPDPRMYPAA-PYYPMYGGHQQQ 432

[Close]

BLAST of Carg08764 vs. TAIR10
Match: AT1G47490.1 (RNA-binding protein 47C)

HSP 1 Score: 427.2 bits (1097), Expect = 1.5e-119
Identity = 222/341 (65.10%), Postives = 263/341 (77.13%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFAS--IGEIASIKIIRNKQSGLSEGYGFVEFFAHATA 253
           GENKTIWVGDLHHWM+E+YL++ FAS    EI S+K+IRNK +GLSEGYGFVEF +H  A
Sbjct: 98  GENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVA 157

Query: 254 DKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDALLYDTF 313
           DK L+ + G  MP+T+QPFRLNWA+FSTG+KR +N+ PDLSIFVGDL+ DV+D LL++TF
Sbjct: 158 DKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETF 217

Query: 314 SSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPR 373
           S K+PSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AM+EMNGV CSSR MRIG ATPR
Sbjct: 218 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 277

Query: 374 KSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEI 433
           K++GYQ     QGGY  NG  +   + EGD  NTTIFVGGLD +VTDEDL+QPF+++GEI
Sbjct: 278 KTNGYQ----QQGGYMPNGTLT---RPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEI 337

Query: 434 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATF-------------------RD-FGNQW 493
           VSVKIPVGKGCGFVQF NR +AEEAL+KLN T                    RD +GNQW
Sbjct: 338 VSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 397

Query: 494 NGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
              YYGG  Y+GYGY +P  DP MY AA   Y +YG HQQQ
Sbjct: 398 VDPYYGGQFYNGYGYMVPQPDPRMYPAA-PYYPMYGGHQQQ 430

[Close]

BLAST of Carg08764 vs. TAIR10
Match: AT3G19130.1 (RNA-binding protein 47B)

HSP 1 Score: 391.3 bits (1004), Expect = 9.2e-109
Identity = 181/279 (64.87%), Postives = 236/279 (84.59%), Query Frame = 0


Query: 190 QGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHA 249
           +GSG + KT+WVGDL HWM+E+YLH+CF+  GE++S+K+IRNK +  SEGYGFVEF + A
Sbjct: 101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 160

Query: 250 TADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRS-DNDPDLSIFVGDLAADVTDALLYD 309
            A++ LQNY+G +MP+++QPFR+NWA+FSTG+KR+ +N PDLS+FVGDL+ DVTD LL++
Sbjct: 161 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 220

Query: 310 TFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAAT 369
           TFS ++PSVK+AKVVID+NTGRSKGYGFVRFGD+NERS+A++EMNG YCS+R MR+G AT
Sbjct: 221 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 280

Query: 370 PRKSSGYQPQNSSQ-----GGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQP 429
           P+++   Q Q+SSQ     GG+ +NG    G QS+G+S N TIFVGG+DP+V DEDLRQP
Sbjct: 281 PKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQP 340

Query: 430 FSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT 463
           FSQ+GE+VSVKIPVGKGCGFVQFA+R  AE+A++ LN T
Sbjct: 341 FSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGT 379

[Close]

BLAST of Carg08764 vs. TAIR10
Match: AT1G49600.1 (RNA-binding protein 47A)

HSP 1 Score: 386.3 bits (991), Expect = 3.0e-107
Identity = 194/325 (59.69%), Postives = 239/325 (73.54%), Query Frame = 0


Query: 197 KTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADKALQ 256
           KT+WVGDL HWM+E+YLH CF+   E++S+K+IRNKQ+  SEGYGFVEF + + A++ALQ
Sbjct: 119 KTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQ 178

Query: 257 NYAGVLMPSTEQPFRLNWATFSTGDKR-SDNDPDLSIFVGDLAADVTDALLYDTFSSKFP 316
           +++GV MP+ EQPFRLNWA+FSTG+KR S+N PDLSIFVGDLA DV+DA+L +TF+ ++P
Sbjct: 179 SFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYP 238

Query: 317 SVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSSGY 376
           SVK AKVVID+NTGRSKGYGFVRFGD+NERS+AM+EMNG +CSSR MR+G ATP++++ Y
Sbjct: 239 SVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAY 298

Query: 377 QPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKI 436
             QN SQ      G    G  S+G+S N+TIFVGGLD +VT+EDL QPFS +GE+VSVKI
Sbjct: 299 GQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKI 358

Query: 437 PVGKGCGFVQFANRNDAEEALQKLNATF-------------------RDFGNQWNGAYYG 496
           PVGKGCGFVQFANR  AEEA+  LN T                     D GNQWNG Y  
Sbjct: 359 PVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQWNGGYSR 418

Query: 497 GHIYDGYGYGLPPHDPSMYQAAYGA 502
           G    GY  G    D +MY  A  A
Sbjct: 419 G---QGYNNGYANQDSNMYATAAAA 440

[Close]

BLAST of Carg08764 vs. TAIR10
Match: AT5G54900.1 (RNA-binding protein 45A)

HSP 1 Score: 315.1 bits (806), Expect = 8.4e-86
Identity = 173/347 (49.86%), Postives = 221/347 (63.69%), Query Frame = 0


Query: 191 GSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHAT 250
           GS  + K++W+GDL  WM+E+Y+ + FA  GE  S K+IRNK +G SEGYGF+EF +H+ 
Sbjct: 54  GSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSV 113

Query: 251 ADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDALLYDT 310
           A++ LQ Y G  MPSTEQ FRLNWA    G+KR   + PD +IFVGDLA +VTD +L DT
Sbjct: 114 AERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDT 173

Query: 311 FSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATP 370
           F + + SVK AKVV+D  TGRSKGYGFVRF D+NE+ +AM+EMNG YCS+RPMRIG A  
Sbjct: 174 FKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAAN 233

Query: 371 RKSSGYQP--QNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQY 430
           + +   QP    ++QG  +           + D  NTTIFVGGLD NVTD++L+  F Q+
Sbjct: 234 KNALPMQPAMYQNTQGANA----------GDNDPNNTTIFVGGLDANVTDDELKSIFGQF 293

Query: 431 GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT----------------FRDFGNQWN 490
           GE++ VKIP GK CGFVQ+AN+  AE AL  LN T                 +    QWN
Sbjct: 294 GELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQWN 353

Query: 491 GAYYGGH---IYDGYGYGL--PPHDPSMYQAAYGAYTVYGSHQQQHR 514
           G  Y G+      GYGY    P  DP+ Y   YG YT YG++QQQ +
Sbjct: 354 GGGYYGYPPQPQGGYGYAAQPPTQDPNAY---YGGYTGYGNYQQQRQ 387

[Close]

BLAST of Carg08764 vs. Swiss-Prot
Match: sp|Q9SX80|R47CP_ARATH (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 2.7e-118
Identity = 223/341 (65.40%), Postives = 264/341 (77.42%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFASI--GEIASIKIIRNKQSGLSEGYGFVEFFAHATA 253
           GENKTIWVGDL +WM+E+YL++ F S    EI S+K+IRNK +G SEGYGFVEF +H  A
Sbjct: 100 GENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVA 159

Query: 254 DKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDALLYDTF 313
           DK LQ + G  MP+T+QPFRLNWA+FSTG+KR +N+ PDLSIFVGDLA DV+DALL++TF
Sbjct: 160 DKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETF 219

Query: 314 SSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPR 373
           S K+PSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AM+EMNGV CSSR MRIG ATPR
Sbjct: 220 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 279

Query: 374 KSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEI 433
           K++GYQ     QGGY  +G F+   +SEGD+ NTTIFVGGLD +VTDEDL+QPFS++GEI
Sbjct: 280 KTNGYQ----QQGGYMPSGAFT---RSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEI 339

Query: 434 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATF-------------------RD-FGNQW 493
           VSVKIPVGKGCGFVQF NR +AEEAL+KLN T                    RD +GNQW
Sbjct: 340 VSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 399

Query: 494 NGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
              YYGG  Y+GYGY +P  DP MY AA   Y +YG HQQQ
Sbjct: 400 VDPYYGGQFYNGYGYMVPQPDPRMYPAA-PYYPMYGGHQQQ 432

[Close]

BLAST of Carg08764 vs. Swiss-Prot
Match: sp|Q9SX79|RB47C_ARATH (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 2.7e-118
Identity = 222/341 (65.10%), Postives = 263/341 (77.13%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFAS--IGEIASIKIIRNKQSGLSEGYGFVEFFAHATA 253
           GENKTIWVGDLHHWM+E+YL++ FAS    EI S+K+IRNK +GLSEGYGFVEF +H  A
Sbjct: 98  GENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVA 157

Query: 254 DKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDALLYDTF 313
           DK L+ + G  MP+T+QPFRLNWA+FSTG+KR +N+ PDLSIFVGDL+ DV+D LL++TF
Sbjct: 158 DKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETF 217

Query: 314 SSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPR 373
           S K+PSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AM+EMNGV CSSR MRIG ATPR
Sbjct: 218 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 277

Query: 374 KSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEI 433
           K++GYQ     QGGY  NG  +   + EGD  NTTIFVGGLD +VTDEDL+QPF+++GEI
Sbjct: 278 KTNGYQ----QQGGYMPNGTLT---RPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEI 337

Query: 434 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATF-------------------RD-FGNQW 493
           VSVKIPVGKGCGFVQF NR +AEEAL+KLN T                    RD +GNQW
Sbjct: 338 VSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 397

Query: 494 NGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
              YYGG  Y+GYGY +P  DP MY AA   Y +YG HQQQ
Sbjct: 398 VDPYYGGQFYNGYGYMVPQPDPRMYPAA-PYYPMYGGHQQQ 430

[Close]

BLAST of Carg08764 vs. Swiss-Prot
Match: sp|Q9LEB3|RBP47_NICPL (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 2.4e-114
Identity = 209/344 (60.76%), Postives = 258/344 (75.00%), Query Frame = 0


Query: 195 ENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADKA 254
           +NKTIW+GDL  WM+ESYLH+CF+  GE+ S+KIIRNKQ+G SE YGFVEF  HA A+K 
Sbjct: 82  DNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKV 141

Query: 255 LQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDALLYDTFSSKF 314
           LQ+Y G +MP+TEQPFRLNWA FSTG+KR++   D SIFVGDLA+DVTD +L DTF+S++
Sbjct: 142 LQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRY 201

Query: 315 PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSSG 374
           PS+K AKVV+DANTG SKGYGFVRFGD++ERS+AM+EMNGVYCSSR MRIG ATP+K S 
Sbjct: 202 PSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSA 261

Query: 375 YQPQNSS----QGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEI 434
           ++  +S      GGY++NG  + G QS+GDS+NTTIFVGGLD  VTDE+LRQ F+Q+GE+
Sbjct: 262 HEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEV 321

Query: 435 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATF--------------------RDFGNQW 494
           VSVKIP GKGCGFVQF++R+ A+EA+QKL+                        D G+QW
Sbjct: 322 VSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQW 381

Query: 495 NGAYYGGHIYDGYGYGLPPH-DPSMYQ--AAYGAYT-VYGSHQQ 511
           NG Y G   Y GYGYG   + D  MY   AAYGA +  YG+HQQ
Sbjct: 382 NGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASSNRYGNHQQ 425

[Close]

BLAST of Carg08764 vs. Swiss-Prot
Match: sp|Q0WW84|RB47B_ARATH (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=2 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.7e-107
Identity = 181/279 (64.87%), Postives = 236/279 (84.59%), Query Frame = 0


Query: 190 QGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHA 249
           +GSG + KT+WVGDL HWM+E+YLH+CF+  GE++S+K+IRNK +  SEGYGFVEF + A
Sbjct: 101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 160

Query: 250 TADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRS-DNDPDLSIFVGDLAADVTDALLYD 309
            A++ LQNY+G +MP+++QPFR+NWA+FSTG+KR+ +N PDLS+FVGDL+ DVTD LL++
Sbjct: 161 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 220

Query: 310 TFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAAT 369
           TFS ++PSVK+AKVVID+NTGRSKGYGFVRFGD+NERS+A++EMNG YCS+R MR+G AT
Sbjct: 221 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 280

Query: 370 PRKSSGYQPQNSSQ-----GGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQP 429
           P+++   Q Q+SSQ     GG+ +NG    G QS+G+S N TIFVGG+DP+V DEDLRQP
Sbjct: 281 PKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQP 340

Query: 430 FSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT 463
           FSQ+GE+VSVKIPVGKGCGFVQFA+R  AE+A++ LN T
Sbjct: 341 FSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGT 379

[Close]

BLAST of Carg08764 vs. Swiss-Prot
Match: sp|F4I3B3|RB47A_ARATH (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 5.3e-106
Identity = 194/325 (59.69%), Postives = 239/325 (73.54%), Query Frame = 0


Query: 197 KTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADKALQ 256
           KT+WVGDL HWM+E+YLH CF+   E++S+K+IRNKQ+  SEGYGFVEF + + A++ALQ
Sbjct: 119 KTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQ 178

Query: 257 NYAGVLMPSTEQPFRLNWATFSTGDKR-SDNDPDLSIFVGDLAADVTDALLYDTFSSKFP 316
           +++GV MP+ EQPFRLNWA+FSTG+KR S+N PDLSIFVGDLA DV+DA+L +TF+ ++P
Sbjct: 179 SFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYP 238

Query: 317 SVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSSGY 376
           SVK AKVVID+NTGRSKGYGFVRFGD+NERS+AM+EMNG +CSSR MR+G ATP++++ Y
Sbjct: 239 SVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAY 298

Query: 377 QPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKI 436
             QN SQ      G    G  S+G+S N+TIFVGGLD +VT+EDL QPFS +GE+VSVKI
Sbjct: 299 GQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKI 358

Query: 437 PVGKGCGFVQFANRNDAEEALQKLNATF-------------------RDFGNQWNGAYYG 496
           PVGKGCGFVQFANR  AEEA+  LN T                     D GNQWNG Y  
Sbjct: 359 PVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQWNGGYSR 418

Query: 497 GHIYDGYGYGLPPHDPSMYQAAYGA 502
           G    GY  G    D +MY  A  A
Sbjct: 419 G---QGYNNGYANQDSNMYATAAAA 440

[Close]

BLAST of Carg08764 vs. TrEMBL
Match: tr|A0A1S3BUU0|A0A1S3BUU0_CUCME (polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103493523 PE=4 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 4.9e-173
Identity = 353/419 (84.25%), Postives = 375/419 (89.50%), Query Frame = 0


Query: 115 MQSNGSDSQPQEPNQRH-QQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           MQSNGSDSQPQEPNQRH QQPQ W+     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQRHQQQPQPWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 175 XXXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQ 234
           XXXXXXX      QPL+GSG ENKTIWVGDLHHWM+ESYLH+CF+S+GEI+S+K+IRNKQ
Sbjct: 61  XXXXXXXLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 235 SGLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIF 294
           +GLSEGYGFVEF +HATA+K LQNY+G+ MPSTEQ FRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 TGLSEGYGFVEFLSHATAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 295 VGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMN 354
           VGDLAADVTD+LLY+TFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMN
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 355 GVYCSSRPMRIGAATPRKSSGYQPQNSSQ-GGYSTNGPFSQGLQSEGDSANTTIFVGGLD 414
           G+YCSSRPMRIGAATPRKSSGYQ Q+SSQ GGYSTNG FSQGLQSEGDSANTTIFVGGLD
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 415 PNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT---------- 474
           PNVTDEDLRQPFSQ+GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN T          
Sbjct: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360

Query: 475 ---------FRDFGNQWNGAYYGGHIYDGYGYGL-PPHDPSMYQAAYGAYTVYGSHQQQ 512
                    FR+FGNQWNGAYYGGHIYDGYGYGL  PHDPSMY AAYGAYTVYG+HQQQ
Sbjct: 361 WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQ 419

[Close]

BLAST of Carg08764 vs. TrEMBL
Match: tr|M5XWD8|M5XWD8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G440700 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 3.7e-152
Identity = 275/340 (80.88%), Postives = 295/340 (86.76%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADK 253
           GENKTIWVGDLHHWM+E+YLH CFAS GEIASIK+IRNKQ+ LSEGYGFVEFF+HATA+K
Sbjct: 97  GENKTIWVGDLHHWMDENYLHTCFASTGEIASIKVIRNKQTLLSEGYGFVEFFSHATAEK 156

Query: 254 ALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDALLYDTFSSK 313
            LQ Y G+LMP+TEQPFRLNWATFSTGDKRSDN PDLSIFVGDLAADVTD+LL++TFSSK
Sbjct: 157 VLQTYTGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFSSK 216

Query: 314 FPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSS 373
           +PSVKAAKVV DANTGRSKGYGFVRFGD+NERSQAM+EMNGVYCSSRPMRIGAATPRKSS
Sbjct: 217 YPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSS 276

Query: 374 GYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSV 433
           GYQ Q SSQGGY +NG  +QG QS+GDS NTTIFVGGLDPNVTDEDLR PFSQYGEIVSV
Sbjct: 277 GYQQQYSSQGGYVSNGTPTQGFQSDGDSTNTTIFVGGLDPNVTDEDLRHPFSQYGEIVSV 336

Query: 434 KIPVGKGCGFVQFANRNDAEEALQKLNAT-------------------FR-DFGNQWNGA 493
           KIPVGKGCGFVQFANRN+AEEAL KLN T                   FR DFGNQW GA
Sbjct: 337 KIPVGKGCGFVQFANRNNAEEALPKLNGTVIGKQTVRLSWGRNPANKQFRTDFGNQWAGA 396

Query: 494 YYGGHIYDGYGYGLPP-HDPSMY-QAAYGAYTVYGSHQQQ 512
           YYGG +YDGYGY LPP HDPSMY  AAYGAY VYG+HQQQ
Sbjct: 397 YYGGPVYDGYGYALPPHHDPSMYAAAAYGAYPVYGTHQQQ 436

[Close]

BLAST of Carg08764 vs. TrEMBL
Match: tr|A0A251RCH6|A0A251RCH6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G440700 PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 4.8e-152
Identity = 275/341 (80.65%), Postives = 295/341 (86.51%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADK 253
           GENKTIWVGDLHHWM+E+YLH CFAS GEIASIK+IRNKQ+ LSEGYGFVEFF+HATA+K
Sbjct: 97  GENKTIWVGDLHHWMDENYLHTCFASTGEIASIKVIRNKQTLLSEGYGFVEFFSHATAEK 156

Query: 254 ALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDALLYDTFSSK 313
            LQ Y G+LMP+TEQPFRLNWATFSTGDKRSDN PDLSIFVGDLAADVTD+LL++TFSSK
Sbjct: 157 VLQTYTGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFSSK 216

Query: 314 FPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSS 373
           +PSVKAAKVV DANTGRSKGYGFVRFGD+NERSQAM+EMNGVYCSSRPMRIGAATPRKSS
Sbjct: 217 YPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSS 276

Query: 374 GYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSV 433
           GYQ Q SSQGGY +NG  +QG QS+GDS NTTIFVGGLDPNVTDEDLR PFSQYGEIVSV
Sbjct: 277 GYQQQYSSQGGYVSNGTPTQGFQSDGDSTNTTIFVGGLDPNVTDEDLRHPFSQYGEIVSV 336

Query: 434 KIPVGKGCGFVQFANRNDAEEALQKLNAT--------------------FR-DFGNQWNG 493
           KIPVGKGCGFVQFANRN+AEEAL KLN T                    FR DFGNQW G
Sbjct: 337 KIPVGKGCGFVQFANRNNAEEALPKLNGTVIGKQTVRLSWGRNPANKQQFRTDFGNQWAG 396

Query: 494 AYYGGHIYDGYGYGLPP-HDPSMY-QAAYGAYTVYGSHQQQ 512
           AYYGG +YDGYGY LPP HDPSMY  AAYGAY VYG+HQQQ
Sbjct: 397 AYYGGPVYDGYGYALPPHHDPSMYAAAAYGAYPVYGTHQQQ 437

[Close]

BLAST of Carg08764 vs. TrEMBL
Match: tr|A0A2C9U131|A0A2C9U131_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G033900 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 5.3e-151
Identity = 266/339 (78.47%), Postives = 294/339 (86.73%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADK 253
           GENKTIW+GDLHHWM+E+YLH CFAS GEIASIK+IRNKQ+GLSEGYGFVEFF HATA+K
Sbjct: 96  GENKTIWIGDLHHWMDENYLHTCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK 155

Query: 254 ALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDALLYDTFSSK 313
            LQNY G+LMP+TEQPFRLNWATFSTGDKRSDN PDLSIFVGDLAADVTD++L++TF+S+
Sbjct: 156 VLQNYTGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSILHETFASR 215

Query: 314 FPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSS 373
           +PSVKAAKVV DANTGRSKGYGFVRFGDD+ER+QAM+EMNGV+CSSRPMRIGAATPRKSS
Sbjct: 216 YPSVKAAKVVFDANTGRSKGYGFVRFGDDSERAQAMTEMNGVHCSSRPMRIGAATPRKSS 275

Query: 374 GYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSV 433
           GYQ     QGGY++NG   QG QS+GDS NTTIFVGGLDPNVTDEDL+QPFSQYGE+VSV
Sbjct: 276 GYQ----QQGGYASNGASGQGFQSDGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEVVSV 335

Query: 434 KIPVGKGCGFVQFANRNDAEEALQKLNAT-------------------FR-DFGNQWNGA 493
           KIPVGKGCGFVQF NR++AEEALQKLN T                   FR D GNQW+GA
Sbjct: 336 KIPVGKGCGFVQFGNRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRSDLGNQWSGA 395

Query: 494 YYGGHIYDGYGYGL-PPHDPSMYQAAYGAYTVYGSHQQQ 512
           YYGG +YDGYGY L PPHDPSMY AAYGAY VYGSHQQQ
Sbjct: 396 YYGGQVYDGYGYALPPPHDPSMYAAAYGAYPVYGSHQQQ 430

[Close]

BLAST of Carg08764 vs. TrEMBL
Match: tr|V4T4E9|V4T4E9_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001214mg PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 3.4e-150
Identity = 269/340 (79.12%), Postives = 295/340 (86.76%), Query Frame = 0


Query: 196 NKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADKAL 255
           NKTIWVGDLHHWM+E+YLH+CFAS GEIASIK+IRNKQ+GLSEGYGFVEFF HATA+K L
Sbjct: 91  NKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVL 150

Query: 256 QNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDALLYDTFSSKFP 315
           Q+Y  +LMP+T+QPFRLNWATFSTGDKRSDN PDLSIFVGDLAADVTD+LL++TF+S++P
Sbjct: 151 QSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAADVTDSLLHETFASRYP 210

Query: 316 SVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSSGY 375
           SVKAAKVV DANTGRSKGYGFVRFGDDNERSQAM+EMNGVYCSSRPMRIGAATPRKSSGY
Sbjct: 211 SVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGY 270

Query: 376 QPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKI 435
           Q Q SSQGGY++NG   QG QSEGDS+NTTIFVGGLDPNVTDEDLRQPFSQYGEI SVKI
Sbjct: 271 QQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 330

Query: 436 PVGKGCGFVQFANRNDAEEALQKLNAT-------------------FR-DFGNQWNGAYY 495
           PVGKGCGFVQFANR +AEEAL KLN T                   FR D+GNQW+GAYY
Sbjct: 331 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYY 390

Query: 496 GGHIYDGYGYGL-PPHDPSMY---QAAYGAYTVYGSHQQQ 512
           GG +YDGYGY + PP+DPSMY    AAYGAY VYGSHQQQ
Sbjct: 391 GGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYGSHQQQ 430

The following BLAST results are available for this feature:

BLAST of Carg08764 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936173.1	3.1e-195	94.71	polyadenylate-binding protein RBP47C-like [Cucurbita moschata]	[more]
XP_023535397.1	6.5e-193	93.75	polyadenylate-binding protein RBP47C-like [Cucurbita pepo subsp. pepo]	[more]
XP_022976308.1	2.5e-189	92.55	polyadenylate-binding protein RBP47C-like [Cucurbita maxima]	[more]
XP_022140707.1	8.8e-174	87.02	polyadenylate-binding protein RBP47-like [Momordica charantia]	[more]
XP_022982257.1	1.5e-173	80.62	polyadenylate-binding protein RBP47C-like [Cucurbita maxima]	[more]

BLAST of Carg08764 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G47500.1	1.5e-119	65.40	RNA-binding protein 47C'	[more]
AT1G47490.1	1.5e-119	65.10	RNA-binding protein 47C	[more]
AT3G19130.1	9.2e-109	64.87	RNA-binding protein 47B	[more]
AT1G49600.1	3.0e-107	59.69	RNA-binding protein 47A	[more]
AT5G54900.1	8.4e-86	49.86	RNA-binding protein 45A	[more]

BLAST of Carg08764 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SX80\|R47CP_ARATH	2.7e-118	65.40	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
sp\|Q9SX79\|RB47C_ARATH	2.7e-118	65.10	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]
sp\|Q9LEB3\|RBP47_NICPL	2.4e-114	60.76	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
sp\|Q0WW84\|RB47B_ARATH	1.7e-107	64.87	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
sp\|F4I3B3\|RB47A_ARATH	5.3e-106	59.69	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]

BLAST of Carg08764 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BUU0\|A0A1S3BUU0_CUCME	4.9e-173	84.25	polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103493523...	[more]
tr\|M5XWD8\|M5XWD8_PRUPE	3.7e-152	80.88	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G440700 PE=4 SV=1	[more]
tr\|A0A251RCH6\|A0A251RCH6_PRUPE	4.8e-152	80.65	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G440700 PE=4 SV=1	[more]
tr\|A0A2C9U131\|A0A2C9U131_MANES	5.3e-151	78.47	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G033900 PE=4 SV=...	[more]
tr\|V4T4E9\|V4T4E9_9ROSI	3.4e-150	79.12	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001214mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08764-RA	Carg08764-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 449..469
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..396
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..396
None	No IPR available	PANTHER	PTHR43955	FAMILY NOT NAMED	coord: 115..462
None	No IPR available	PANTHER	PTHR43955	FAMILY NOT NAMED	coord: 464..511
None	No IPR available	PANTHER	PTHR43955:SF5	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 115..462
None	No IPR available	PANTHER	PTHR43955:SF5	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 464..511
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 289..368 e-value: 2.91957E-44 score: 150.892
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 198..278 e-value: 4.96961E-40 score: 139.32
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 291..365 e-value: 2.4E-18 score: 76.9 coord: 405..473 e-value: 9.1E-18 score: 75.0 coord: 198..273 e-value: 2.4E-12 score: 57.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 292..361 e-value: 1.4E-15 score: 56.8 coord: 199..261 e-value: 3.1E-12 score: 46.0 coord: 406..462 e-value: 4.6E-18 score: 64.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 404..460 score: 16.33
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 197..277 score: 14.607
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 290..369 score: 16.705
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 277..392 e-value: 4.3E-21 score: 77.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 196..276 e-value: 2.6E-21 score: 77.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 393..472 e-value: 2.8E-21 score: 77.6
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 161..279
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 287..461

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08764	Cla020695	Watermelon (97103) v1	carwmB0102
Carg08764	Csa4G639100	Cucumber (Chinese Long) v2	carcuB0112
Carg08764	Csa2G360590	Cucumber (Chinese Long) v2	carcuB0110
Carg08764	MELO3C010891	Melon (DHL92) v3.5.1	carmeB0105
Carg08764	MELO3C016735	Melon (DHL92) v3.5.1	carmeB0108
Carg08764	ClCG05G019630	Watermelon (Charleston Gray)	carwcgB0104
Carg08764	CSPI04G23890	Wild cucumber (PI 183967)	carcpiB0117
Carg08764	CSPI02G19430	Wild cucumber (PI 183967)	carcpiB0115
Carg08764	Cucsa.123510	Cucumber (Gy14) v1	carcgyB0123
Carg08764	Cucsa.232650	Cucumber (Gy14) v1	carcgyB0124
Carg08764	CmaCh01G018590	Cucurbita maxima (Rimu)	carcmaB0136
Carg08764	CmaCh12G005180	Cucurbita maxima (Rimu)	carcmaB0135
Carg08764	CmaCh09G002130	Cucurbita maxima (Rimu)	carcmaB0134
Carg08764	CmoCh12G004590	Cucurbita moschata (Rifu)	carcmoB0145
Carg08764	CmoCh01G019180	Cucurbita moschata (Rifu)	carcmoB0146
Carg08764	Lsi08G014460	Bottle gourd (USVL1VR-Ls)	carlsiB096
Carg08764	Lsi04G015820	Bottle gourd (USVL1VR-Ls)	carlsiB094
Carg08764	Cp4.1LG06g01540	Cucurbita pepo (Zucchini)	carcpeB0154
Carg08764	Cp4.1LG02g06960	Cucurbita pepo (Zucchini)	carcpeB0153
Carg08764	Cp4.1LG07g04610	Cucurbita pepo (Zucchini)	carcpeB0155
Carg08764	CsGy2G019310	Cucumber (Gy14) v2	carcgybB0110
Carg08764	CsGy4G022190	Cucumber (Gy14) v2	carcgybB0112
Carg08764	MELO3C010891.2	Melon (DHL92) v3.6.1	carmedB0107
Carg08764	MELO3C016734.2	Melon (DHL92) v3.6.1	carmedB0110
Carg08764	CsaV3_4G034120	Cucumber (Chinese Long) v3	carcucB0121
Carg08764	CsaV3_2G028130	Cucumber (Chinese Long) v3	carcucB0119
Carg08764	Cla97C05G101260	Watermelon (97103) v2	carwmbB0107
Carg08764	Bhi04G000285	Wax gourd	carwgoB0117
Carg08764	Bhi09G002755	Wax gourd	carwgoB0122

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg08764	Carg10588	Silver-seed gourd	carcarB124

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08764	Watermelon (Charleston Gray)	carwcgB0106
Carg08764	Watermelon (97103) v1	carwmB0101
Carg08764	Watermelon (97103) v2	carwmbB0109
Carg08764	Silver-seed gourd	carcarB119
Carg08764	Cucurbita maxima (Rimu)	carcmaB0137
Carg08764	Cucurbita moschata (Rifu)	carcmoB0144
Carg08764	Cucurbita moschata (Rifu)	carcmoB0147
Carg08764	Cucurbita pepo (Zucchini)	carcpeB0152