Carg08764-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08764-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Polyadenylate-binding protein
Location	Cucurbita_argyrosperma_scaffold_057 : 913225 .. 918720 (-)
Sequence length	1602

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTCCTCATTTTATCTTCCATTTGCAATATATCGCACACCCATGGAAGGCTGCTGCCGGTGGAGCATCCCATCGTCGGAAATCATCACCGCAAAATCGTTGAAACTGCCGGTGTTGCTCCTCTCGGGTCGAGGCCACCGGCATTTCAACGCACTACCTCCTCTCCTGGCGACGGCGACGCCGAGGTGCTAGGCGGCGACTTCCGTCCGACCACCCCGGGCCACAGTCCTGGAGTTGGCCACTCTCTTGCACCAGCAAGCCACGTGGATTCGAAAATCCATTAGAATTTATGATCATTTATATAGTTATATGGTATATTAATCATGGTATTCGTAGTAACTTAGTTTAGTTGTATATTCATATTACCAACTGCATGTTCTATCATTATGTATGATTATCTGTTAATTAATGAAGCTTGATTTTATTATTATTTTCTTTTATTTATTTATTTTTTAAGCTATTTCCATAATTAATAAAAATAAATTAGTGTCCTATGGTTAAGAGACAAAAGTAAGATATTACTTTTTGAAACAAAACCATATTCTTTTTTTATTTAATTTATGAATTTATTTATAGGTAGATTGGAGGAATAAAATTACACTAAAATATGTATTAGTCTAGTTATTGACTCTAACTTATCCAAACCAATTATTTTGTTTAAAATTTAAAATGTTAAATTACATTTATTAATGGATTTCTTTTTATACAAAACAAAAATTGCTTAATTATTTAATATTTATTCTGGGACATATTCGACTTAATACAAATTTAGTAACTTAATATTATGTATATAATTGTTATAGGAATATAGTTTAACCAACACAATATTAAAAAGATCAATTTCGAGGATTTTTATAGAAATTTAAAACTTATATTTTAGTTTAATTTATTGAATAAAATTTATATTAATGACTTTAATTTTATATTTTTTTATCAAATAACTTTTATATTATAGAGCTTTAAAAAATTATGAGATAATCTAATAAATTATGATAGTATTAAGCTTTAATCCAACAAAAAATTGGGTTAATTGTATAAAAAGTTAAAACATGATTAAATTATTTAGAAAAAAAAAAGTACAAAATTTGAAATTTATTTGATAAACTTATACAAAATAATTTTTTTCTAAAATTAAAAATAATAGAAAAACTTTTTAGTAATTTAAGAGTTGATGGTTACAGGATAATTGGCGGCGGATGGAGGCAAAGGGCGGGGAGAGGAAACTGGAATGAACAGCTGAGATTAAGCGTGTTCCTTAATCGTAGGGTGTATATAGACAGCCCAAAAACCTTCCGGTTTGTATTTTCGTCATCCTCATCCTCAGGCTTAGACCCTAATCCAGTCCTCCGCTTTCGGCTTCTTTGGGTTTCCCTTTTTTGCTCTCAGATTCGGATTCTTTTTCCTCTCATTCCATTCAGATTCTTTTACCCTTTTCAGTAAGGGTGTACATTAAAATCTGCTCCATTCTCCTTGTTAATACGGAGGAAGATAAGATGCAAAGCAACGGTTCTGATTCGCAGCCGCAAGAACCAAATCAGCGCCACCAGCAGCCGCAGTCGTGGATGTCAATGCAGTACCCGCCGCCGGCTATGGTAATGCCGCACCATATGATGACGCCTCCGCATTACATGGCGCCGCCGCTTCCGCCGCCGCCGTATATGCATTATCACCCCCAATATCAGCATCACCATCTCCCTATTCAGCATTCGCAGCCGCTACAGGGATCTGGTGGCGAAAACAAAACGATTTGGGTGGGTGACTTGCATCATTGGATGAACGAGAGTTACCTCCATAACTGCTTTGCTTCCATTGGCGAGGTTCAATTTTCTCTCTTCTTTTTCACTCATCTTTACGTTTATTATCGATGATGATTATTTGCTGATTTTCTGGAATCGTTAAAGTTCTCATATAAATCAATCTCTTTTTATTTTTTTATTTCTTTATGAAATGATTCATTCTCTTCCTGAACATAAGGCTAGAAATATTGAATAATTCCCTTTTCCGATTCATCCAAACAGTTGTAAACGTCTACCAGTTTCTAGTTCTGATGATTTTTCTTTTTGGAGGTTTGCGTACTTCATTGTCGTTGTGCAATTTGAACACAGAAGTGCAGAACCAAATGACAATTATAAGTTTGATCAAACATTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAAAAAAAGGTTTTTGCTACTTTTGAGAAAGTGAGAATTTATTGGAGTTTTTTGTTGCGATTGGTTTACATTTTCTGATATTAGTAGGTTAGAGTATAGAATCTGCGTAAAAATGCAGCCGTATATTTTGCCAAAATGTTGTTTTGGCATTTGACAAATTTTAATGAGAGCGAATTGGCAACTGGTAAATGGTAAAGCAACATAGAAGCATGTTATAGGACTTCTTAGTCCTGTCTAGAATGGCTTTATCTTCTAGCCTCTCAAATTTACCACCTGTTGAATATGGTAAAGCAACATAAAAGCATGTTATAGGACTTCTTAGTCCTGTCTAGAATGGCTTTATCTTCTAGCCTCTCAAATTTACCACCTGTTGAATATTGTGAAAAGGGTATGAAGAAGTAATGGAAGATCACATTCTCTAGCAATTGACATTGACATTTTGTTTCTGAAGGAGGTTTCTTTTATAGCTTTTTATATTTATTGCTGTGTATTCAGCTATGTACATGGATTTTCTAGCTACTCTATCTCGTTCTTTTCCCTACTCTTTCGAACCAAATAATAAAAATGAATCTAATGACATTATCCCAACTGTTTCCAAACAATCTCTTTTGTTGAAGAATCTTGAATTGTTCTTAGTTTGGCATGATCATTTTGAACATTGATCGTTTTATTTCCTGTATGATGCAGATTGCATCGATCAAGATCATTCGTAATAAGCAAAGTGGTTTGTCTGAGGGGTATGGGTTTGTAGAATTTTTTGCCCATGCAACAGCTGACAAAGCTCTTCAGAACTATGCTGGAGTGCTCATGCCAAGTACAGAGCAGCCTTTCCGCTTGAATTGGGCGACATTTAGCACCGGTGACAAACGATCAGATAATGATCCCGATCTTTCTATTTTTGTTGGTGACTTAGCTGCAGATGTTACTGATGCTCTGTTGTACGATACATTTTCTAGTAAATTTCCTTCTGTTAAAGCAGCAAAAGTTGTCATTGATGCGAATACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGTCTGAAATGAATGGTGTATATTGTTCGAGCAGACCTATGCGCATTGGTGCAGCAACGCCTAGAAAGTCTTCTGGATATCAGCCACAGAATTCTTCACAAGGTATATTTAAATTGTATGGTTACAATGTAGTGTGCATAGCCTAAAACCACTTCCAAGAGGGATTAGGGTTAGTCTTTGGGGAGGACGTGCAATTCTGGAATAAGTAAAGATATGGAGGCTTTCTACTTTTTCGGGGGCATTTGGTTCAAGGCTGGGGGTTATGAATCAAAAAGGGCTGTGAAAATGAAAACTATAATGCTAACAAAGAAATATGTGTTGTGCATTCCTGTCTATCAATCAAAAAGGGTTTGGATTTAATTTTTTGAATGCATGTGTTCTTAGAGTTTACTCATGGTTGTACACTTCCCTACCCCTTTTGGACTGCTCATGCATATGTTGTCCTCTGTTTATTATAGGAGGATATTCAACAAATGGTCCCTTTAGCCAAGGACTCCAATCTGAAGGAGATTCTGCAAATACAACTGTAAGTTGCTTTGGTTACTTTTATCTGCACAGCTAGAAATTCCACGTATTCTTGGGTTTAACCTGAGCTTTCCTTTTAGATATTTGTTGGAGGGCTTGATCCTAATGTCACCGATGAAGATCTGAGACAACCTTTCTCACAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTTCAATTTGCCAATAGGTAAAAAGTTTGTGATCAGATTTTCCTTTCATATAAACCATGAATTAACAGTATCTGTCTGGTTATTGGTTTTGTCAATTTGTTGATTTTTACTAAATTCTGTCACATATTCTTCTCAATTTTCCTTTGCAGAAATGATGCTGAAGAGGCCTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTATTCGTCTTTCTTGGGGCCGAAATCCAGCAAATAAGCAGGCAAATTACCCTTTTCTCCTAGTGTGAAAATATTAACAAAAAACTTATGCATCACTCTCTCAATTTCCATGCTTTTCCTGAAGGGCAAGGATAGGAAAACAAATAAAATGAGCTGTTTTAAGAACTTCAATTAAGTATGAACTTTTTATTTGAACCTTGTCTCAGTTATGGAATTGAATTTGGAAACACTTGGCCGGGGAAATGTTTAGTTTACATTCCTTCTTAATTCTTACCATCTGTAGCGGCCGATTTAGGTTGATAAATAGTCTTAACAGCATTTTTTCTTGCATTTGTTGAGGTGTGGCAGTTCAGAGATTTTGGTAACCAGTGGAATGGAGCTTACTACGGGGGGCACATATATGATGGCTATGGATATGGTCTGCCGCCTCACGATCCAAGTATGTATCAGGCAGCTTATGGAGCTTACACTGTATATGGAAGCCATCAACAACAAGTAATCTGAACACAGAAAAGCTCATATTAATCCTTAGGCGCTTTTCAAGTAGAACAGCTGAAGTTGCTTCAGCTTCTGGAATTCACTTGGTTTTAGATTTTTTCTTTTTTCCATATTAATCATCCTTCCATCTGCCTAGAGGAACTGAATTTTGATGACCTGAGCTAGTTCTCTCATCTTGTAGGGAATATTATATATTTATTTCATTCAGATTGATAACAAACTTATTTATTAGAATATATATATATATATATATATATATATATATATATATATATATATATATATAATGTTGCAATAGTGCATGCATGTTACACACACAATGTCTCGGTTATACCTATTCTTTGGTCAATCTTTCTGTTCATCTTTTTCAACTAGTTTAAGAGTTTCGGCCTTTCGAAATGCAGGATCGATTGTTACTAAAGTAAAATTATGTTCATTTGGTGAGAATTTTGGATGTTTTTTTTGGCATCTGAATCTTATGTTCTCTCTGTTAGAATGGATTTGTGGGTAGGTTGGTATCCTACATTAGGTATGAGTACACTACATATTGACTTTGTTGGACAGAGCAGTACACTTCTGAATCATCACCTTTTCCTTTAATATTCTTTACTGTTCAATTGCAAGTCTGCAACTTCCTTTCGATCCATGGAGATGATTCAGAAGCATTATTGAAAATTGAGTAGTGTTGCACTGCGATTGGGAATTGTAAAAGAGGCTTTTTAGATGGAAGGTGGGTGTGCCATGTCAATGTCACAGCACCGCCGTTGCCCTACGGCTACTGCAAAAGTGCAGCAGCCTGCTAAGAAAAGCATAAAGGCGTTTTAG

mRNA sequence

ATGGCCTTCCTCATTTTATCTTCCATTTGCAATATATCGCACACCCATGGAAGGCTGCTGCCGGTGGAGCATCCCATCGTCGGAAATCATCACCGCAAAATCGTTGAAACTGCCGGTGTTGCTCCTCTCGGGTCGAGGCCACCGGCATTTCAACGCACTACCTCCTCTCCTGGCGACGGCGACGCCGAGGTGCTAGGCGGCGACTTCCGTCCGACCACCCCGGGCCACAGTCCTGGAGTTGGCCACTCTCTTGCACCAGCAAGCCACATTCTTTTACCCTTTTCAGTAAGGGTGTACATTAAAATCTGCTCCATTCTCCTTGTTAATACGGAGGAAGATAAGATGCAAAGCAACGGTTCTGATTCGCAGCCGCAAGAACCAAATCAGCGCCACCAGCAGCCGCAGTCGTGGATGTCAATGCAGTACCCGCCGCCGGCTATGGTAATGCCGCACCATATGATGACGCCTCCGCATTACATGGCGCCGCCGCTTCCGCCGCCGCCGTATATGCATTATCACCCCCAATATCAGCATCACCATCTCCCTATTCAGCATTCGCAGCCGCTACAGGGATCTGGTGGCGAAAACAAAACGATTTGGGTGGGTGACTTGCATCATTGGATGAACGAGAGTTACCTCCATAACTGCTTTGCTTCCATTGGCGAGATTGCATCGATCAAGATCATTCGTAATAAGCAAAGTGGTTTGTCTGAGGGGTATGGGTTTGTAGAATTTTTTGCCCATGCAACAGCTGACAAAGCTCTTCAGAACTATGCTGGAGTGCTCATGCCAAGTACAGAGCAGCCTTTCCGCTTGAATTGGGCGACATTTAGCACCGGTGACAAACGATCAGATAATGATCCCGATCTTTCTATTTTTGTTGGTGACTTAGCTGCAGATGTTACTGATGCTCTGTTGTACGATACATTTTCTAGTAAATTTCCTTCTGTTAAAGCAGCAAAAGTTGTCATTGATGCGAATACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGTCTGAAATGAATGGTGTATATTGTTCGAGCAGACCTATGCGCATTGGTGCAGCAACGCCTAGAAAGTCTTCTGGATATCAGCCACAGAATTCTTCACAAGGAGGATATTCAACAAATGGTCCCTTTAGCCAAGGACTCCAATCTGAAGGAGATTCTGCAAATACAACTATATTTGTTGGAGGGCTTGATCCTAATGTCACCGATGAAGATCTGAGACAACCTTTCTCACAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTTCAATTTGCCAATAGAAATGATGCTGAAGAGGCCTTGCAGAAACTAAATGCAACTTTCAGAGATTTTGGTAACCAGTGGAATGGAGCTTACTACGGGGGGCACATATATGATGGCTATGGATATGGTCTGCCGCCTCACGATCCAAGTATGTATCAGGCAGCTTATGGAGCTTACACTGTATATGGAAGCCATCAACAACAACACCGCCGTTGCCCTACGGCTACTGCAAAAGTGCAGCAGCCTGCTAAGAAAAGCATAAAGGCGTTTTAG

Coding sequence (CDS)

ATGGCCTTCCTCATTTTATCTTCCATTTGCAATATATCGCACACCCATGGAAGGCTGCTGCCGGTGGAGCATCCCATCGTCGGAAATCATCACCGCAAAATCGTTGAAACTGCCGGTGTTGCTCCTCTCGGGTCGAGGCCACCGGCATTTCAACGCACTACCTCCTCTCCTGGCGACGGCGACGCCGAGGTGCTAGGCGGCGACTTCCGTCCGACCACCCCGGGCCACAGTCCTGGAGTTGGCCACTCTCTTGCACCAGCAAGCCACATTCTTTTACCCTTTTCAGTAAGGGTGTACATTAAAATCTGCTCCATTCTCCTTGTTAATACGGAGGAAGATAAGATGCAAAGCAACGGTTCTGATTCGCAGCCGCAAGAACCAAATCAGCGCCACCAGCAGCCGCAGTCGTGGATGTCAATGCAGTACCCGCCGCCGGCTATGGTAATGCCGCACCATATGATGACGCCTCCGCATTACATGGCGCCGCCGCTTCCGCCGCCGCCGTATATGCATTATCACCCCCAATATCAGCATCACCATCTCCCTATTCAGCATTCGCAGCCGCTACAGGGATCTGGTGGCGAAAACAAAACGATTTGGGTGGGTGACTTGCATCATTGGATGAACGAGAGTTACCTCCATAACTGCTTTGCTTCCATTGGCGAGATTGCATCGATCAAGATCATTCGTAATAAGCAAAGTGGTTTGTCTGAGGGGTATGGGTTTGTAGAATTTTTTGCCCATGCAACAGCTGACAAAGCTCTTCAGAACTATGCTGGAGTGCTCATGCCAAGTACAGAGCAGCCTTTCCGCTTGAATTGGGCGACATTTAGCACCGGTGACAAACGATCAGATAATGATCCCGATCTTTCTATTTTTGTTGGTGACTTAGCTGCAGATGTTACTGATGCTCTGTTGTACGATACATTTTCTAGTAAATTTCCTTCTGTTAAAGCAGCAAAAGTTGTCATTGATGCGAATACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGTCTGAAATGAATGGTGTATATTGTTCGAGCAGACCTATGCGCATTGGTGCAGCAACGCCTAGAAAGTCTTCTGGATATCAGCCACAGAATTCTTCACAAGGAGGATATTCAACAAATGGTCCCTTTAGCCAAGGACTCCAATCTGAAGGAGATTCTGCAAATACAACTATATTTGTTGGAGGGCTTGATCCTAATGTCACCGATGAAGATCTGAGACAACCTTTCTCACAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTTCAATTTGCCAATAGAAATGATGCTGAAGAGGCCTTGCAGAAACTAAATGCAACTTTCAGAGATTTTGGTAACCAGTGGAATGGAGCTTACTACGGGGGGCACATATATGATGGCTATGGATATGGTCTGCCGCCTCACGATCCAAGTATGTATCAGGCAGCTTATGGAGCTTACACTGTATATGGAAGCCATCAACAACAACACCGCCGTTGCCCTACGGCTACTGCAAAAGTGCAGCAGCCTGCTAAGAAAAGCATAAAGGCGTTTTAG

Protein sequence

MAFLILSSICNISHTHGRLLPVEHPIVGNHHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHILLPFSVRVYIKICSILLVNTEEDKMQSNGSDSQPQEPNQRHQQPQSWMSMQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHYHPQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATFRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQHRRCPTATAKVQQPAKKSIKAF

Homology

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BLAST of Carg08764-RA vs. NCBI nr
Match: XP_022936173.1 (polyadenylate-binding protein RBP47C-like [Cucurbita moschata])

HSP 1 Score: 691.0 bits (1782), Expect = 3.1e-195
Identity = 394/416 (94.71%), Postives = 396/416 (95.19%), Query Frame = 0


Query: 115 MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 175 XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQS 234
           XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWM+ESYLHNCFASIGEIASIKIIRNKQS
Sbjct: 61  XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEIASIKIIRNKQS 120

Query: 235 GLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 294
           GLSEGYGFVEFFAHATA+KALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV
Sbjct: 121 GLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 180

Query: 295 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 354
           GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG
Sbjct: 181 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 240

Query: 355 VYCSSRPMRIGAATPRKSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPN 414
           VYCSSRPMRIGAATPRKSSGYQ QNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPN
Sbjct: 241 VYCSSRPMRIGAATPRKSSGYQQQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPN 300

Query: 415 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT------------ 474
           VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT            
Sbjct: 301 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRLSWG 360

Query: 475 -------FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
                  FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ
Sbjct: 361 RNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 416

[Close]

BLAST of Carg08764-RA vs. NCBI nr
Match: XP_023535397.1 (polyadenylate-binding protein RBP47C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 683.3 bits (1762), Expect = 6.5e-193
Identity = 390/416 (93.75%), Postives = 393/416 (94.47%), Query Frame = 0


Query: 115 MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 175 XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQS 234
           XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWM+ESYLH CFASIGEI+SIKIIRNKQS
Sbjct: 61  XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMDESYLHTCFASIGEISSIKIIRNKQS 120

Query: 235 GLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 294
           GLSEGYGFVEFFAHATA+KALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV
Sbjct: 121 GLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 180

Query: 295 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 354
           GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG
Sbjct: 181 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 240

Query: 355 VYCSSRPMRIGAATPRKSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPN 414
           VYCSSRPMRIGAATPRKSSGYQ QNSSQGGYSTNGP SQGLQSEGDSANTTIFVGGLDPN
Sbjct: 241 VYCSSRPMRIGAATPRKSSGYQQQNSSQGGYSTNGPLSQGLQSEGDSANTTIFVGGLDPN 300

Query: 415 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT------------ 474
           VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT            
Sbjct: 301 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRLSWG 360

Query: 475 -------FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
                  FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMY AAYGAYTVYGSHQQQ
Sbjct: 361 RNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYHAAYGAYTVYGSHQQQ 416

[Close]

BLAST of Carg08764-RA vs. NCBI nr
Match: XP_022976308.1 (polyadenylate-binding protein RBP47C-like [Cucurbita maxima])

HSP 1 Score: 671.4 bits (1731), Expect = 2.5e-189
Identity = 385/416 (92.55%), Postives = 388/416 (93.27%), Query Frame = 0


Query: 115 MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 175 XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQS 234
           XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWM+ESYLH CFASIGEI+ IKIIRNKQS
Sbjct: 61  XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMDESYLHTCFASIGEISLIKIIRNKQS 120

Query: 235 GLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 294
           GLSEGYGFVEFFAHATA+KALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV
Sbjct: 121 GLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 180

Query: 295 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 354
           GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG
Sbjct: 181 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 240

Query: 355 VYCSSRPMRIGAATPRKSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPN 414
           VYCSSRPMRIGAATPRKSSGYQ QN SQG Y TNGP SQGLQSEGDSANTTIFVGGLDPN
Sbjct: 241 VYCSSRPMRIGAATPRKSSGYQQQNFSQGEYLTNGPLSQGLQSEGDSANTTIFVGGLDPN 300

Query: 415 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT------------ 474
           VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT            
Sbjct: 301 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRLSWG 360

Query: 475 -------FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
                  FRDFGNQWNG YYGGHIYDGYGYGLPPHDPSMY AAYGAYTVYGSHQQQ
Sbjct: 361 RNPANKQFRDFGNQWNGPYYGGHIYDGYGYGLPPHDPSMYHAAYGAYTVYGSHQQQ 416

[Close]

BLAST of Carg08764-RA vs. NCBI nr
Match: XP_022140707.1 (polyadenylate-binding protein RBP47-like [Momordica charantia])

HSP 1 Score: 619.8 bits (1597), Expect = 8.8e-174
Identity = 362/416 (87.02%), Postives = 374/416 (89.90%), Query Frame = 0


Query: 115 MQSNGSDSQPQEPNQRHQQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           MQSNGSDSQPQEPNQ              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 175 XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQS 234
           XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWM+ESYLHNCFASIGEI+SIK+IRNKQ+
Sbjct: 61  XXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEISSIKVIRNKQT 120

Query: 235 GLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFV 294
           GLSEGYGFVEFFAHATA+KALQNY+G+ MP+TEQ FRLNWATFSTGDKRSDNDPDLSIFV
Sbjct: 121 GLSEGYGFVEFFAHATAEKALQNYSGMFMPNTEQAFRLNWATFSTGDKRSDNDPDLSIFV 180

Query: 295 GDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNG 354
           GDLAADVTD LLY+TFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMNG
Sbjct: 181 GDLAADVTDTLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNG 240

Query: 355 VYCSSRPMRIGAATPRKSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPN 414
           VYCSSRPMRIGAATPRKSSGYQ Q SSQGGYS+NG FSQGLQSEGDSANTTIFVGGLDPN
Sbjct: 241 VYCSSRPMRIGAATPRKSSGYQQQYSSQGGYSSNGSFSQGLQSEGDSANTTIFVGGLDPN 300

Query: 415 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT------------ 474
           VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN T            
Sbjct: 301 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLSWG 360

Query: 475 -------FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
                  FRDFGNQWNGAYYGGH+YDGYGYGLPPHDPSMY AAYGAY VYGSHQQQ
Sbjct: 361 RNPANKQFRDFGNQWNGAYYGGHMYDGYGYGLPPHDPSMYHAAYGAYPVYGSHQQQ 415

[Close]

BLAST of Carg08764-RA vs. NCBI nr
Match: XP_022982257.1 (polyadenylate-binding protein RBP47C-like [Cucurbita maxima])

HSP 1 Score: 619.0 bits (1595), Expect = 1.5e-173
Identity = 337/418 (80.62%), Postives = 350/418 (83.73%), Query Frame = 0


Query: 115 MQSNGSDSQPQEPNQRHQQP--QSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           MQ+NGSDSQP E NQRHQQP  +SWM +QY          XXXXXXX      XXXXXXX
Sbjct: 1   MQNNGSDSQPPETNQRHQQPPQKSWMPLQY-RPPAMVMPHXXXXXXXYIAPPLXXXXXXX 60

Query: 175 XXXXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNK 234
           XXXXX         QPLQGSGGENKTIWVGDL HWM+E+YLHNCF S GEI+SIKIIRNK
Sbjct: 61  XXXXXPHHLPMQHSQPLQGSGGENKTIWVGDLQHWMDETYLHNCFGSFGEISSIKIIRNK 120

Query: 235 QSGLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSI 294
           Q+GLSEGYGFVEFFAHATA+KALQNY+G+ MP TEQ FRLNWATFSTGDKRSDNDPDLSI
Sbjct: 121 QTGLSEGYGFVEFFAHATAEKALQNYSGMCMPDTEQAFRLNWATFSTGDKRSDNDPDLSI 180

Query: 295 FVGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEM 354
           FVGDLAADVTD LLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EM
Sbjct: 181 FVGDLAADVTDTLLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEM 240

Query: 355 NGVYCSSRPMRIGAATPRKSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLD 414
           NGV+CSSRPMRIGAATPRKSSGYQ Q +S G YSTNG FSQG QSEGDSANTTIFVGGLD
Sbjct: 241 NGVHCSSRPMRIGAATPRKSSGYQQQRASLGAYSTNGAFSQGFQSEGDSANTTIFVGGLD 300

Query: 415 PNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT---------- 474
           PNV DEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN T          
Sbjct: 301 PNVNDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVVGKQTVRLS 360

Query: 475 ---------FRDFGNQWNGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
                    FRDFGNQWNGAYYGGHIYDGYGYGLPP DPSMY AAYGAY  YGSHQQQ
Sbjct: 361 WGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLPPQDPSMYHAAYGAYPFYGSHQQQ 417

[Close]

BLAST of Carg08764-RA vs. TAIR10
Match: AT1G47500.1 (RNA-binding protein 47C')

HSP 1 Score: 427.2 bits (1097), Expect = 1.5e-119
Identity = 223/341 (65.40%), Postives = 264/341 (77.42%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFASI--GEIASIKIIRNKQSGLSEGYGFVEFFAHATA 253
           GENKTIWVGDL +WM+E+YL++ F S    EI S+K+IRNK +G SEGYGFVEF +H  A
Sbjct: 100 GENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVA 159

Query: 254 DKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDALLYDTF 313
           DK LQ + G  MP+T+QPFRLNWA+FSTG+KR +N+ PDLSIFVGDLA DV+DALL++TF
Sbjct: 160 DKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETF 219

Query: 314 SSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPR 373
           S K+PSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AM+EMNGV CSSR MRIG ATPR
Sbjct: 220 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 279

Query: 374 KSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEI 433
           K++GYQ     QGGY  +G F+   +SEGD+ NTTIFVGGLD +VTDEDL+QPFS++GEI
Sbjct: 280 KTNGYQ----QQGGYMPSGAFT---RSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEI 339

Query: 434 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATF-------------------RD-FGNQW 493
           VSVKIPVGKGCGFVQF NR +AEEAL+KLN T                    RD +GNQW
Sbjct: 340 VSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 399

Query: 494 NGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
              YYGG  Y+GYGY +P  DP MY AA   Y +YG HQQQ
Sbjct: 400 VDPYYGGQFYNGYGYMVPQPDPRMYPAA-PYYPMYGGHQQQ 432

[Close]

BLAST of Carg08764-RA vs. TAIR10
Match: AT1G47490.1 (RNA-binding protein 47C)

HSP 1 Score: 427.2 bits (1097), Expect = 1.5e-119
Identity = 222/341 (65.10%), Postives = 263/341 (77.13%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFAS--IGEIASIKIIRNKQSGLSEGYGFVEFFAHATA 253
           GENKTIWVGDLHHWM+E+YL++ FAS    EI S+K+IRNK +GLSEGYGFVEF +H  A
Sbjct: 98  GENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVA 157

Query: 254 DKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDALLYDTF 313
           DK L+ + G  MP+T+QPFRLNWA+FSTG+KR +N+ PDLSIFVGDL+ DV+D LL++TF
Sbjct: 158 DKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETF 217

Query: 314 SSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPR 373
           S K+PSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AM+EMNGV CSSR MRIG ATPR
Sbjct: 218 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 277

Query: 374 KSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEI 433
           K++GYQ     QGGY  NG  +   + EGD  NTTIFVGGLD +VTDEDL+QPF+++GEI
Sbjct: 278 KTNGYQ----QQGGYMPNGTLT---RPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEI 337

Query: 434 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATF-------------------RD-FGNQW 493
           VSVKIPVGKGCGFVQF NR +AEEAL+KLN T                    RD +GNQW
Sbjct: 338 VSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 397

Query: 494 NGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
              YYGG  Y+GYGY +P  DP MY AA   Y +YG HQQQ
Sbjct: 398 VDPYYGGQFYNGYGYMVPQPDPRMYPAA-PYYPMYGGHQQQ 430

[Close]

BLAST of Carg08764-RA vs. TAIR10
Match: AT3G19130.1 (RNA-binding protein 47B)

HSP 1 Score: 391.3 bits (1004), Expect = 9.2e-109
Identity = 181/279 (64.87%), Postives = 236/279 (84.59%), Query Frame = 0


Query: 190 QGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHA 249
           +GSG + KT+WVGDL HWM+E+YLH+CF+  GE++S+K+IRNK +  SEGYGFVEF + A
Sbjct: 101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 160

Query: 250 TADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRS-DNDPDLSIFVGDLAADVTDALLYD 309
            A++ LQNY+G +MP+++QPFR+NWA+FSTG+KR+ +N PDLS+FVGDL+ DVTD LL++
Sbjct: 161 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 220

Query: 310 TFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAAT 369
           TFS ++PSVK+AKVVID+NTGRSKGYGFVRFGD+NERS+A++EMNG YCS+R MR+G AT
Sbjct: 221 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 280

Query: 370 PRKSSGYQPQNSSQ-----GGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQP 429
           P+++   Q Q+SSQ     GG+ +NG    G QS+G+S N TIFVGG+DP+V DEDLRQP
Sbjct: 281 PKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQP 340

Query: 430 FSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT 463
           FSQ+GE+VSVKIPVGKGCGFVQFA+R  AE+A++ LN T
Sbjct: 341 FSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGT 379

[Close]

BLAST of Carg08764-RA vs. TAIR10
Match: AT1G49600.1 (RNA-binding protein 47A)

HSP 1 Score: 386.3 bits (991), Expect = 3.0e-107
Identity = 194/325 (59.69%), Postives = 239/325 (73.54%), Query Frame = 0


Query: 197 KTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADKALQ 256
           KT+WVGDL HWM+E+YLH CF+   E++S+K+IRNKQ+  SEGYGFVEF + + A++ALQ
Sbjct: 119 KTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQ 178

Query: 257 NYAGVLMPSTEQPFRLNWATFSTGDKR-SDNDPDLSIFVGDLAADVTDALLYDTFSSKFP 316
           +++GV MP+ EQPFRLNWA+FSTG+KR S+N PDLSIFVGDLA DV+DA+L +TF+ ++P
Sbjct: 179 SFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYP 238

Query: 317 SVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSSGY 376
           SVK AKVVID+NTGRSKGYGFVRFGD+NERS+AM+EMNG +CSSR MR+G ATP++++ Y
Sbjct: 239 SVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAY 298

Query: 377 QPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKI 436
             QN SQ      G    G  S+G+S N+TIFVGGLD +VT+EDL QPFS +GE+VSVKI
Sbjct: 299 GQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKI 358

Query: 437 PVGKGCGFVQFANRNDAEEALQKLNATF-------------------RDFGNQWNGAYYG 496
           PVGKGCGFVQFANR  AEEA+  LN T                     D GNQWNG Y  
Sbjct: 359 PVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQWNGGYSR 418

Query: 497 GHIYDGYGYGLPPHDPSMYQAAYGA 502
           G    GY  G    D +MY  A  A
Sbjct: 419 G---QGYNNGYANQDSNMYATAAAA 440

[Close]

BLAST of Carg08764-RA vs. TAIR10
Match: AT5G54900.1 (RNA-binding protein 45A)

HSP 1 Score: 315.1 bits (806), Expect = 8.4e-86
Identity = 173/347 (49.86%), Postives = 221/347 (63.69%), Query Frame = 0


Query: 191 GSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHAT 250
           GS  + K++W+GDL  WM+E+Y+ + FA  GE  S K+IRNK +G SEGYGF+EF +H+ 
Sbjct: 54  GSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSV 113

Query: 251 ADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDALLYDT 310
           A++ LQ Y G  MPSTEQ FRLNWA    G+KR   + PD +IFVGDLA +VTD +L DT
Sbjct: 114 AERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDT 173

Query: 311 FSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATP 370
           F + + SVK AKVV+D  TGRSKGYGFVRF D+NE+ +AM+EMNG YCS+RPMRIG A  
Sbjct: 174 FKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAAN 233

Query: 371 RKSSGYQP--QNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQY 430
           + +   QP    ++QG  +           + D  NTTIFVGGLD NVTD++L+  F Q+
Sbjct: 234 KNALPMQPAMYQNTQGANA----------GDNDPNNTTIFVGGLDANVTDDELKSIFGQF 293

Query: 431 GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT----------------FRDFGNQWN 490
           GE++ VKIP GK CGFVQ+AN+  AE AL  LN T                 +    QWN
Sbjct: 294 GELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQWN 353

Query: 491 GAYYGGH---IYDGYGYGL--PPHDPSMYQAAYGAYTVYGSHQQQHR 514
           G  Y G+      GYGY    P  DP+ Y   YG YT YG++QQQ +
Sbjct: 354 GGGYYGYPPQPQGGYGYAAQPPTQDPNAY---YGGYTGYGNYQQQRQ 387

[Close]

BLAST of Carg08764-RA vs. Swiss-Prot
Match: sp|Q9SX80|R47CP_ARATH (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 2.7e-118
Identity = 223/341 (65.40%), Postives = 264/341 (77.42%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFASI--GEIASIKIIRNKQSGLSEGYGFVEFFAHATA 253
           GENKTIWVGDL +WM+E+YL++ F S    EI S+K+IRNK +G SEGYGFVEF +H  A
Sbjct: 100 GENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVA 159

Query: 254 DKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDALLYDTF 313
           DK LQ + G  MP+T+QPFRLNWA+FSTG+KR +N+ PDLSIFVGDLA DV+DALL++TF
Sbjct: 160 DKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETF 219

Query: 314 SSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPR 373
           S K+PSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AM+EMNGV CSSR MRIG ATPR
Sbjct: 220 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 279

Query: 374 KSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEI 433
           K++GYQ     QGGY  +G F+   +SEGD+ NTTIFVGGLD +VTDEDL+QPFS++GEI
Sbjct: 280 KTNGYQ----QQGGYMPSGAFT---RSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEI 339

Query: 434 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATF-------------------RD-FGNQW 493
           VSVKIPVGKGCGFVQF NR +AEEAL+KLN T                    RD +GNQW
Sbjct: 340 VSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 399

Query: 494 NGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
              YYGG  Y+GYGY +P  DP MY AA   Y +YG HQQQ
Sbjct: 400 VDPYYGGQFYNGYGYMVPQPDPRMYPAA-PYYPMYGGHQQQ 432

[Close]

BLAST of Carg08764-RA vs. Swiss-Prot
Match: sp|Q9SX79|RB47C_ARATH (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 2.7e-118
Identity = 222/341 (65.10%), Postives = 263/341 (77.13%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFAS--IGEIASIKIIRNKQSGLSEGYGFVEFFAHATA 253
           GENKTIWVGDLHHWM+E+YL++ FAS    EI S+K+IRNK +GLSEGYGFVEF +H  A
Sbjct: 98  GENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVA 157

Query: 254 DKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDALLYDTF 313
           DK L+ + G  MP+T+QPFRLNWA+FSTG+KR +N+ PDLSIFVGDL+ DV+D LL++TF
Sbjct: 158 DKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETF 217

Query: 314 SSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPR 373
           S K+PSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AM+EMNGV CSSR MRIG ATPR
Sbjct: 218 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 277

Query: 374 KSSGYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEI 433
           K++GYQ     QGGY  NG  +   + EGD  NTTIFVGGLD +VTDEDL+QPF+++GEI
Sbjct: 278 KTNGYQ----QQGGYMPNGTLT---RPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEI 337

Query: 434 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATF-------------------RD-FGNQW 493
           VSVKIPVGKGCGFVQF NR +AEEAL+KLN T                    RD +GNQW
Sbjct: 338 VSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 397

Query: 494 NGAYYGGHIYDGYGYGLPPHDPSMYQAAYGAYTVYGSHQQQ 512
              YYGG  Y+GYGY +P  DP MY AA   Y +YG HQQQ
Sbjct: 398 VDPYYGGQFYNGYGYMVPQPDPRMYPAA-PYYPMYGGHQQQ 430

[Close]

BLAST of Carg08764-RA vs. Swiss-Prot
Match: sp|Q9LEB3|RBP47_NICPL (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 2.4e-114
Identity = 209/344 (60.76%), Postives = 258/344 (75.00%), Query Frame = 0


Query: 195 ENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADKA 254
           +NKTIW+GDL  WM+ESYLH+CF+  GE+ S+KIIRNKQ+G SE YGFVEF  HA A+K 
Sbjct: 82  DNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKV 141

Query: 255 LQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDALLYDTFSSKF 314
           LQ+Y G +MP+TEQPFRLNWA FSTG+KR++   D SIFVGDLA+DVTD +L DTF+S++
Sbjct: 142 LQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRY 201

Query: 315 PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSSG 374
           PS+K AKVV+DANTG SKGYGFVRFGD++ERS+AM+EMNGVYCSSR MRIG ATP+K S 
Sbjct: 202 PSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSA 261

Query: 375 YQPQNSS----QGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEI 434
           ++  +S      GGY++NG  + G QS+GDS+NTTIFVGGLD  VTDE+LRQ F+Q+GE+
Sbjct: 262 HEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEV 321

Query: 435 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATF--------------------RDFGNQW 494
           VSVKIP GKGCGFVQF++R+ A+EA+QKL+                        D G+QW
Sbjct: 322 VSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQW 381

Query: 495 NGAYYGGHIYDGYGYGLPPH-DPSMYQ--AAYGAYT-VYGSHQQ 511
           NG Y G   Y GYGYG   + D  MY   AAYGA +  YG+HQQ
Sbjct: 382 NGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASSNRYGNHQQ 425

[Close]

BLAST of Carg08764-RA vs. Swiss-Prot
Match: sp|Q0WW84|RB47B_ARATH (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=2 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.7e-107
Identity = 181/279 (64.87%), Postives = 236/279 (84.59%), Query Frame = 0


Query: 190 QGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHA 249
           +GSG + KT+WVGDL HWM+E+YLH+CF+  GE++S+K+IRNK +  SEGYGFVEF + A
Sbjct: 101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 160

Query: 250 TADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRS-DNDPDLSIFVGDLAADVTDALLYD 309
            A++ LQNY+G +MP+++QPFR+NWA+FSTG+KR+ +N PDLS+FVGDL+ DVTD LL++
Sbjct: 161 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 220

Query: 310 TFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAAT 369
           TFS ++PSVK+AKVVID+NTGRSKGYGFVRFGD+NERS+A++EMNG YCS+R MR+G AT
Sbjct: 221 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 280

Query: 370 PRKSSGYQPQNSSQ-----GGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQP 429
           P+++   Q Q+SSQ     GG+ +NG    G QS+G+S N TIFVGG+DP+V DEDLRQP
Sbjct: 281 PKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQP 340

Query: 430 FSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT 463
           FSQ+GE+VSVKIPVGKGCGFVQFA+R  AE+A++ LN T
Sbjct: 341 FSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGT 379

[Close]

BLAST of Carg08764-RA vs. Swiss-Prot
Match: sp|F4I3B3|RB47A_ARATH (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 5.3e-106
Identity = 194/325 (59.69%), Postives = 239/325 (73.54%), Query Frame = 0


Query: 197 KTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADKALQ 256
           KT+WVGDL HWM+E+YLH CF+   E++S+K+IRNKQ+  SEGYGFVEF + + A++ALQ
Sbjct: 119 KTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQ 178

Query: 257 NYAGVLMPSTEQPFRLNWATFSTGDKR-SDNDPDLSIFVGDLAADVTDALLYDTFSSKFP 316
           +++GV MP+ EQPFRLNWA+FSTG+KR S+N PDLSIFVGDLA DV+DA+L +TF+ ++P
Sbjct: 179 SFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYP 238

Query: 317 SVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSSGY 376
           SVK AKVVID+NTGRSKGYGFVRFGD+NERS+AM+EMNG +CSSR MR+G ATP++++ Y
Sbjct: 239 SVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAY 298

Query: 377 QPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKI 436
             QN SQ      G    G  S+G+S N+TIFVGGLD +VT+EDL QPFS +GE+VSVKI
Sbjct: 299 GQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKI 358

Query: 437 PVGKGCGFVQFANRNDAEEALQKLNATF-------------------RDFGNQWNGAYYG 496
           PVGKGCGFVQFANR  AEEA+  LN T                     D GNQWNG Y  
Sbjct: 359 PVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQWNGGYSR 418

Query: 497 GHIYDGYGYGLPPHDPSMYQAAYGA 502
           G    GY  G    D +MY  A  A
Sbjct: 419 G---QGYNNGYANQDSNMYATAAAA 440

[Close]

BLAST of Carg08764-RA vs. TrEMBL
Match: tr|A0A1S3BUU0|A0A1S3BUU0_CUCME (polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103493523 PE=4 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 4.9e-173
Identity = 353/419 (84.25%), Postives = 375/419 (89.50%), Query Frame = 0


Query: 115 MQSNGSDSQPQEPNQRH-QQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
           MQSNGSDSQPQEPNQRH QQPQ W+     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQRHQQQPQPWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 175 XXXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQ 234
           XXXXXXX      QPL+GSG ENKTIWVGDLHHWM+ESYLH+CF+S+GEI+S+K+IRNKQ
Sbjct: 61  XXXXXXXLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 235 SGLSEGYGFVEFFAHATADKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIF 294
           +GLSEGYGFVEF +HATA+K LQNY+G+ MPSTEQ FRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 TGLSEGYGFVEFLSHATAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 295 VGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMN 354
           VGDLAADVTD+LLY+TFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMN
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 355 GVYCSSRPMRIGAATPRKSSGYQPQNSSQ-GGYSTNGPFSQGLQSEGDSANTTIFVGGLD 414
           G+YCSSRPMRIGAATPRKSSGYQ Q+SSQ GGYSTNG FSQGLQSEGDSANTTIFVGGLD
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 415 PNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNAT---------- 474
           PNVTDEDLRQPFSQ+GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN T          
Sbjct: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360

Query: 475 ---------FRDFGNQWNGAYYGGHIYDGYGYGL-PPHDPSMYQAAYGAYTVYGSHQQQ 512
                    FR+FGNQWNGAYYGGHIYDGYGYGL  PHDPSMY AAYGAYTVYG+HQQQ
Sbjct: 361 WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQ 419

[Close]

BLAST of Carg08764-RA vs. TrEMBL
Match: tr|M5XWD8|M5XWD8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G440700 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 3.7e-152
Identity = 275/340 (80.88%), Postives = 295/340 (86.76%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADK 253
           GENKTIWVGDLHHWM+E+YLH CFAS GEIASIK+IRNKQ+ LSEGYGFVEFF+HATA+K
Sbjct: 97  GENKTIWVGDLHHWMDENYLHTCFASTGEIASIKVIRNKQTLLSEGYGFVEFFSHATAEK 156

Query: 254 ALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDALLYDTFSSK 313
            LQ Y G+LMP+TEQPFRLNWATFSTGDKRSDN PDLSIFVGDLAADVTD+LL++TFSSK
Sbjct: 157 VLQTYTGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFSSK 216

Query: 314 FPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSS 373
           +PSVKAAKVV DANTGRSKGYGFVRFGD+NERSQAM+EMNGVYCSSRPMRIGAATPRKSS
Sbjct: 217 YPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSS 276

Query: 374 GYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSV 433
           GYQ Q SSQGGY +NG  +QG QS+GDS NTTIFVGGLDPNVTDEDLR PFSQYGEIVSV
Sbjct: 277 GYQQQYSSQGGYVSNGTPTQGFQSDGDSTNTTIFVGGLDPNVTDEDLRHPFSQYGEIVSV 336

Query: 434 KIPVGKGCGFVQFANRNDAEEALQKLNAT-------------------FR-DFGNQWNGA 493
           KIPVGKGCGFVQFANRN+AEEAL KLN T                   FR DFGNQW GA
Sbjct: 337 KIPVGKGCGFVQFANRNNAEEALPKLNGTVIGKQTVRLSWGRNPANKQFRTDFGNQWAGA 396

Query: 494 YYGGHIYDGYGYGLPP-HDPSMY-QAAYGAYTVYGSHQQQ 512
           YYGG +YDGYGY LPP HDPSMY  AAYGAY VYG+HQQQ
Sbjct: 397 YYGGPVYDGYGYALPPHHDPSMYAAAAYGAYPVYGTHQQQ 436

[Close]

BLAST of Carg08764-RA vs. TrEMBL
Match: tr|A0A251RCH6|A0A251RCH6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G440700 PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 4.8e-152
Identity = 275/341 (80.65%), Postives = 295/341 (86.51%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADK 253
           GENKTIWVGDLHHWM+E+YLH CFAS GEIASIK+IRNKQ+ LSEGYGFVEFF+HATA+K
Sbjct: 97  GENKTIWVGDLHHWMDENYLHTCFASTGEIASIKVIRNKQTLLSEGYGFVEFFSHATAEK 156

Query: 254 ALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDALLYDTFSSK 313
            LQ Y G+LMP+TEQPFRLNWATFSTGDKRSDN PDLSIFVGDLAADVTD+LL++TFSSK
Sbjct: 157 VLQTYTGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFSSK 216

Query: 314 FPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSS 373
           +PSVKAAKVV DANTGRSKGYGFVRFGD+NERSQAM+EMNGVYCSSRPMRIGAATPRKSS
Sbjct: 217 YPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSS 276

Query: 374 GYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSV 433
           GYQ Q SSQGGY +NG  +QG QS+GDS NTTIFVGGLDPNVTDEDLR PFSQYGEIVSV
Sbjct: 277 GYQQQYSSQGGYVSNGTPTQGFQSDGDSTNTTIFVGGLDPNVTDEDLRHPFSQYGEIVSV 336

Query: 434 KIPVGKGCGFVQFANRNDAEEALQKLNAT--------------------FR-DFGNQWNG 493
           KIPVGKGCGFVQFANRN+AEEAL KLN T                    FR DFGNQW G
Sbjct: 337 KIPVGKGCGFVQFANRNNAEEALPKLNGTVIGKQTVRLSWGRNPANKQQFRTDFGNQWAG 396

Query: 494 AYYGGHIYDGYGYGLPP-HDPSMY-QAAYGAYTVYGSHQQQ 512
           AYYGG +YDGYGY LPP HDPSMY  AAYGAY VYG+HQQQ
Sbjct: 397 AYYGGPVYDGYGYALPPHHDPSMYAAAAYGAYPVYGTHQQQ 437

[Close]

BLAST of Carg08764-RA vs. TrEMBL
Match: tr|A0A2C9U131|A0A2C9U131_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G033900 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 5.3e-151
Identity = 266/339 (78.47%), Postives = 294/339 (86.73%), Query Frame = 0


Query: 194 GENKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADK 253
           GENKTIW+GDLHHWM+E+YLH CFAS GEIASIK+IRNKQ+GLSEGYGFVEFF HATA+K
Sbjct: 96  GENKTIWIGDLHHWMDENYLHTCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK 155

Query: 254 ALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDALLYDTFSSK 313
            LQNY G+LMP+TEQPFRLNWATFSTGDKRSDN PDLSIFVGDLAADVTD++L++TF+S+
Sbjct: 156 VLQNYTGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSILHETFASR 215

Query: 314 FPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSS 373
           +PSVKAAKVV DANTGRSKGYGFVRFGDD+ER+QAM+EMNGV+CSSRPMRIGAATPRKSS
Sbjct: 216 YPSVKAAKVVFDANTGRSKGYGFVRFGDDSERAQAMTEMNGVHCSSRPMRIGAATPRKSS 275

Query: 374 GYQPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSV 433
           GYQ     QGGY++NG   QG QS+GDS NTTIFVGGLDPNVTDEDL+QPFSQYGE+VSV
Sbjct: 276 GYQ----QQGGYASNGASGQGFQSDGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEVVSV 335

Query: 434 KIPVGKGCGFVQFANRNDAEEALQKLNAT-------------------FR-DFGNQWNGA 493
           KIPVGKGCGFVQF NR++AEEALQKLN T                   FR D GNQW+GA
Sbjct: 336 KIPVGKGCGFVQFGNRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRSDLGNQWSGA 395

Query: 494 YYGGHIYDGYGYGL-PPHDPSMYQAAYGAYTVYGSHQQQ 512
           YYGG +YDGYGY L PPHDPSMY AAYGAY VYGSHQQQ
Sbjct: 396 YYGGQVYDGYGYALPPPHDPSMYAAAYGAYPVYGSHQQQ 430

[Close]

BLAST of Carg08764-RA vs. TrEMBL
Match: tr|V4T4E9|V4T4E9_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001214mg PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 3.4e-150
Identity = 269/340 (79.12%), Postives = 295/340 (86.76%), Query Frame = 0


Query: 196 NKTIWVGDLHHWMNESYLHNCFASIGEIASIKIIRNKQSGLSEGYGFVEFFAHATADKAL 255
           NKTIWVGDLHHWM+E+YLH+CFAS GEIASIK+IRNKQ+GLSEGYGFVEFF HATA+K L
Sbjct: 91  NKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVL 150

Query: 256 QNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDALLYDTFSSKFP 315
           Q+Y  +LMP+T+QPFRLNWATFSTGDKRSDN PDLSIFVGDLAADVTD+LL++TF+S++P
Sbjct: 151 QSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAADVTDSLLHETFASRYP 210

Query: 316 SVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMNGVYCSSRPMRIGAATPRKSSGY 375
           SVKAAKVV DANTGRSKGYGFVRFGDDNERSQAM+EMNGVYCSSRPMRIGAATPRKSSGY
Sbjct: 211 SVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGY 270

Query: 376 QPQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKI 435
           Q Q SSQGGY++NG   QG QSEGDS+NTTIFVGGLDPNVTDEDLRQPFSQYGEI SVKI
Sbjct: 271 QQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 330

Query: 436 PVGKGCGFVQFANRNDAEEALQKLNAT-------------------FR-DFGNQWNGAYY 495
           PVGKGCGFVQFANR +AEEAL KLN T                   FR D+GNQW+GAYY
Sbjct: 331 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYY 390

Query: 496 GGHIYDGYGYGL-PPHDPSMY---QAAYGAYTVYGSHQQQ 512
           GG +YDGYGY + PP+DPSMY    AAYGAY VYGSHQQQ
Sbjct: 391 GGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYGSHQQQ 430

The following BLAST results are available for this feature:

BLAST of Carg08764-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936173.1	3.1e-195	94.71	polyadenylate-binding protein RBP47C-like [Cucurbita moschata]	[more]
XP_023535397.1	6.5e-193	93.75	polyadenylate-binding protein RBP47C-like [Cucurbita pepo subsp. pepo]	[more]
XP_022976308.1	2.5e-189	92.55	polyadenylate-binding protein RBP47C-like [Cucurbita maxima]	[more]
XP_022140707.1	8.8e-174	87.02	polyadenylate-binding protein RBP47-like [Momordica charantia]	[more]
XP_022982257.1	1.5e-173	80.62	polyadenylate-binding protein RBP47C-like [Cucurbita maxima]	[more]

BLAST of Carg08764-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G47500.1	1.5e-119	65.40	RNA-binding protein 47C'	[more]
AT1G47490.1	1.5e-119	65.10	RNA-binding protein 47C	[more]
AT3G19130.1	9.2e-109	64.87	RNA-binding protein 47B	[more]
AT1G49600.1	3.0e-107	59.69	RNA-binding protein 47A	[more]
AT5G54900.1	8.4e-86	49.86	RNA-binding protein 45A	[more]

BLAST of Carg08764-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SX80\|R47CP_ARATH	2.7e-118	65.40	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
sp\|Q9SX79\|RB47C_ARATH	2.7e-118	65.10	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]
sp\|Q9LEB3\|RBP47_NICPL	2.4e-114	60.76	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
sp\|Q0WW84\|RB47B_ARATH	1.7e-107	64.87	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
sp\|F4I3B3\|RB47A_ARATH	5.3e-106	59.69	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]

BLAST of Carg08764-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BUU0\|A0A1S3BUU0_CUCME	4.9e-173	84.25	polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103493523...	[more]
tr\|M5XWD8\|M5XWD8_PRUPE	3.7e-152	80.88	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G440700 PE=4 SV=1	[more]
tr\|A0A251RCH6\|A0A251RCH6_PRUPE	4.8e-152	80.65	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G440700 PE=4 SV=1	[more]
tr\|A0A2C9U131\|A0A2C9U131_MANES	5.3e-151	78.47	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G033900 PE=4 SV=...	[more]
tr\|V4T4E9\|V4T4E9_9ROSI	3.4e-150	79.12	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001214mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg08764	Carg08764	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg08764-RA	Carg08764-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08764-RA.CDS.8	Carg08764-RA.CDS.8	CDS
Carg08764-RA.CDS.7	Carg08764-RA.CDS.7	CDS
Carg08764-RA.CDS.6	Carg08764-RA.CDS.6	CDS
Carg08764-RA.CDS.5	Carg08764-RA.CDS.5	CDS
Carg08764-RA.CDS.4	Carg08764-RA.CDS.4	CDS
Carg08764-RA.CDS.3	Carg08764-RA.CDS.3	CDS
Carg08764-RA.CDS.2	Carg08764-RA.CDS.2	CDS
Carg08764-RA.CDS.1	Carg08764-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08764-RA.exon.8	Carg08764-RA.exon.8	exon
Carg08764-RA.exon.7	Carg08764-RA.exon.7	exon
Carg08764-RA.exon.6	Carg08764-RA.exon.6	exon
Carg08764-RA.exon.5	Carg08764-RA.exon.5	exon
Carg08764-RA.exon.4	Carg08764-RA.exon.4	exon
Carg08764-RA.exon.3	Carg08764-RA.exon.3	exon
Carg08764-RA.exon.2	Carg08764-RA.exon.2	exon
Carg08764-RA.exon.1	Carg08764-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 449..469
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..396
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..396
None	No IPR available	PANTHER	PTHR43955	FAMILY NOT NAMED	coord: 115..462
None	No IPR available	PANTHER	PTHR43955	FAMILY NOT NAMED	coord: 464..511
None	No IPR available	PANTHER	PTHR43955:SF5	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 115..462
None	No IPR available	PANTHER	PTHR43955:SF5	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 464..511
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 289..368 e-value: 2.91957E-44 score: 150.892
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 198..278 e-value: 4.96961E-40 score: 139.32
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 291..365 e-value: 2.4E-18 score: 76.9 coord: 405..473 e-value: 9.1E-18 score: 75.0 coord: 198..273 e-value: 2.4E-12 score: 57.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 292..361 e-value: 1.4E-15 score: 56.8 coord: 199..261 e-value: 3.1E-12 score: 46.0 coord: 406..462 e-value: 4.6E-18 score: 64.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 404..460 score: 16.33
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 197..277 score: 14.607
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 290..369 score: 16.705
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 277..392 e-value: 4.3E-21 score: 77.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 196..276 e-value: 2.6E-21 score: 77.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 393..472 e-value: 2.8E-21 score: 77.6
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 161..279
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 287..461