Carg08042 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCTCGGCCTTCAGTCAGGTCATTCATCAAACAGATTTGTTCCAATTCACAAGCCGATTCTTCTTGCTTCGGCTACATTTTCTCCCTGCCGTTTCCTGCATACAACGCGCACCATCACACATTTCAGTCTCGCTTCTCCGCCTCTCCGCCTCTCCATTTCCTTCTCATCTCATCGCGAAACAGAACTTGAAAGAAACAGAAAAAATGCACCGATCGGTGAGCTGGAACCGATTCTCCGATGAATACTACTCGTCCTCCTCCCCGTCGCCGGCGCTGTCATCGACTCCAGGCCAGGCGTTGCGATTATCATTTGACGGAAATGAGCAGCCGACGAGTTATCCAGCGGATGAGATAGTGAAGCGAGAGAAGGCGCGAGTCAAGTTCGCCGCAACTGCTGTTCATGTGATTCCTCTCGTTTTGGTTCTCTGCGCCATTCTTCTGTGGTTCTTCTCCAATCCAGGTAAGAGAAGATTGTAACGTAACGCAGGTAGGTTTCCAATTCTCCTTCTTCGAATCTTTCATTCTTTCCCGCCATTGGTTTTTCCGGGAAAATGAAATAAAATTTCCCTGTTCCCAAACTGAGAGTTTTCCGCTAATCCAACAAATTAATCTCCAAATTTCATTTTTTTTTTCTTTTATCTAAAAAAATTAAACTTAAAAATTTATATAATAATTTTAAATTTAAAACACTCCCATAACATTCCTATATTAAAAAAGATATTTTAAACTTTTAGAAATTTTTTTTTTAAAAATAAACTAATTAAAAACTGATTTTCAAAAATATTTTAAAATTTTTGTTAATATTCTTAAATTCATTTAAAATCTTTAAAAATACCTTCAATTTTTTTTTTAAAAAAAATATTTTTATTATTGATATGTAAATTAAACCTTTCAAAATAATATTAATATCTTTAAATTTTAAAATTTTAAAATGTGCATATATTTTTATTTGTTGTGTTATTTATTTTTAGCAATATTTCAAAATTTCAATAAAATAAATAAATTAATAATAACTATTGATTTTTAATTCTTAGAATTTATCTCCAGCAATTCAATTTTCTTATAATGAATTTCATATTTATTAACTAAATTTCAAAAAATAATTTTTTTTTTCAAAATTGACTTAGATTTTTTTTTAAATATAATAAAAAAATTATTAATATTTCATTCATATAAATTAGGGCAATGTATATTTTAATTAAATTATTATTATTGTAATTGGCTTTTTTTTTTTTTTTTAATGTGCAGAAATAGATGCGGGGATGAGATGGGATCCAATGGCAGCAAGAATTGAAGGATTGAACGTTGAGGGGGAAATTGAGAGGGAATTTGGTGGTGCCCAAAACGAAGCTCTCCCAATCTTGGACTCAACTCCCTCGACCCTCAAAATCAAGAGGCTCCATTAACCTCGTATCAAATATTACGATACTACCTACGTATTATTATACCTATTCGTATTGACGTTGTCGATAGATAGTACCAAAATATAGACACCTCTTTATGAGAACGTTGATAATTTTGAATGCTTTGAAGGTTTATTAGTTGAA ATGTGCTCGGCCTTCAGTCAGGTCATTCATCAAACAGATTTGTTCCAATTCACAAGCCGATTCTTCTTGCTTCGGCTACATTTTCTCCCTGCCGTTTCCTGCATACAACGCGCACCATCACACATTTCAGTCTCGCTTCTCCGCCTCTCCGCCTCTCCATTTCCTTCTCATCTCATCGCGAAACAGAACTTGAAAGAAACAGAAAAAATGCACCGATCGGTGAGCTGGAACCGATTCTCCGATGAATACTACTCGTCCTCCTCCCCGTCGCCGGCGCTGTCATCGACTCCAGGCCAGGCGTTGCGATTATCATTTGACGGAAATGAGCAGCCGACGAGTTATCCAGCGGATGAGATAGTGAAGCGAGAGAAGGCGCGAGTCAAGTTCGCCGCAACTGCTGTTCATGTGATTCCTCTCGTTTTGGTTCTCTGCGCCATTCTTCTGTGGTTCTTCTCCAATCCAGAAATAGATGCGGGGATGAGATGGGATCCAATGGCAGCAAGAATTGAAGGATTGAACGTTGAGGGGGAAATTGAGAGGGAATTTGGTGGTGCCCAAAACGAAGCTCTCCCAATCTTGGACTCAACTCCCTCGACCCTCAAAATCAAGAGGCTCCATTAACCTCGTATCAAATATTACGATACTACCTACGTATTATTATACCTATTCGTATTGACGTTGTCGATAGATAGTACCAAAATATAGACACCTCTTTATGAGAACGTTGATAATTTTGAATGCTTTGAAGGTTTATTAGTTGAA ATGTGCTCGGCCTTCAGTCAGGTCATTCATCAAACAGATTTGTTCCAATTCACAAGCCGATTCTTCTTGCTTCGGCTACATTTTCTCCCTGCCGTTTCCTGCATACAACGCGCACCATCACACATTTCAGTCTCGCTTCTCCGCCTCTCCGCCTCTCCATTTCCTTCTCATCTCATCGCGAAACAGAACTTGAAAGAAACAGAAAAAATGCACCGATCGGTGAGCTGGAACCGATTCTCCGATGAATACTACTCGTCCTCCTCCCCGTCGCCGGCGCTGTCATCGACTCCAGGCCAGGCGTTGCGATTATCATTTGACGGAAATGAGCAGCCGACGAGTTATCCAGCGGATGAGATAGTGAAGCGAGAGAAGGCGCGAGTCAAGTTCGCCGCAACTGCTGTTCATGTGATTCCTCTCGTTTTGGTTCTCTGCGCCATTCTTCTGTGGTTCTTCTCCAATCCAGAAATAGATGCGGGGATGAGATGGGATCCAATGGCAGCAAGAATTGAAGGATTGAACGTTGAGGGGGAAATTGAGAGGGAATTTGGTGGTGCCCAAAACGAAGCTCTCCCAATCTTGGACTCAACTCCCTCGACCCTCAAAATCAAGAGGCTCCATTAA MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH
BLAST of Carg08042 vs. NCBI nr
Match: XP_023512832.1 (uncharacterized protein LOC111777447 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 283.1 bits (723), Expect = 7.5e-73 Identity = 147/154 (95.45%), Postives = 148/154 (96.10%), Query Frame = 0
BLAST of Carg08042 vs. NCBI nr
Match: XP_022942780.1 (uncharacterized protein LOC111447711 [Cucurbita moschata]) HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68 Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0
BLAST of Carg08042 vs. NCBI nr
Match: XP_022986879.1 (uncharacterized protein LOC111484483 [Cucurbita maxima]) HSP 1 Score: 256.5 bits (654), Expect = 7.6e-65 Identity = 131/139 (94.24%), Postives = 134/139 (96.40%), Query Frame = 0
BLAST of Carg08042 vs. NCBI nr
Match: XP_022140815.1 (uncharacterized protein LOC111011394 isoform X1 [Momordica charantia]) HSP 1 Score: 164.1 bits (414), Expect = 5.1e-37 Identity = 92/140 (65.71%), Postives = 103/140 (73.57%), Query Frame = 0
BLAST of Carg08042 vs. NCBI nr
Match: XP_021823494.1 (uncharacterized protein LOC110764779 [Prunus avium]) HSP 1 Score: 134.4 bits (337), Expect = 4.3e-28 Identity = 71/129 (55.04%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of Carg08042 vs. TAIR10
Match: AT5G61630.1 (unknown protein) HSP 1 Score: 107.8 bits (268), Expect = 7.9e-24 Identity = 54/118 (45.76%), Postives = 79/118 (66.95%), Query Frame = 0
BLAST of Carg08042 vs. TAIR10
Match: AT5G07490.1 (unknown protein) HSP 1 Score: 104.4 bits (259), Expect = 8.7e-23 Identity = 53/121 (43.80%), Postives = 77/121 (63.64%), Query Frame = 0
BLAST of Carg08042 vs. TAIR10
Match: AT2G35658.2 (unknown protein) HSP 1 Score: 50.1 bits (118), Expect = 1.9e-06 Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0
BLAST of Carg08042 vs. TAIR10
Match: AT4G16840.1 (unknown protein) HSP 1 Score: 44.3 bits (103), Expect = 1.1e-04 Identity = 29/85 (34.12%), Postives = 44/85 (51.76%), Query Frame = 0
BLAST of Carg08042 vs. TrEMBL
Match: tr|I1LCI6|I1LCI6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100813926 PE=4 SV=2) HSP 1 Score: 134.0 bits (336), Expect = 3.7e-28 Identity = 73/129 (56.59%), Postives = 88/129 (68.22%), Query Frame = 0
BLAST of Carg08042 vs. TrEMBL
Match: tr|A0A0B2RE95|A0A0B2RE95_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_034027 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 3.7e-28 Identity = 73/129 (56.59%), Postives = 88/129 (68.22%), Query Frame = 0
BLAST of Carg08042 vs. TrEMBL
Match: tr|A0A0A0KZ80|A0A0A0KZ80_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025085 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 3.7e-28 Identity = 82/141 (58.16%), Postives = 94/141 (66.67%), Query Frame = 0
BLAST of Carg08042 vs. TrEMBL
Match: tr|I1NHW0|I1NHW0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100805238 PE=4 SV=2) HSP 1 Score: 133.3 bits (334), Expect = 6.4e-28 Identity = 73/129 (56.59%), Postives = 88/129 (68.22%), Query Frame = 0
BLAST of Carg08042 vs. TrEMBL
Match: tr|A0A1S4E0H1|A0A1S4E0H1_CUCME (uncharacterized protein LOC103494452 OS=Cucumis melo OX=3656 GN=LOC103494452 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 8.3e-28 Identity = 73/114 (64.04%), Postives = 84/114 (73.68%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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