CSPI04G04230 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTGCAGTTACCACCACATCTCACGCACCAACACACAAACAGTATCACTCCTCAGCCTCTTCCATGTTCTTCAGATCTCCTCATCGAGAAAGAGAATTTTACAGAAAAGGAAAAAGAGAATGTACCGATCAGTGAGCTGGAACCGATTCTCCGACGAATACTACTCGCATTCGGCCCCGTCCTCGAAGCCAGGGCAGTCACTGCGACTATCGTCGTCGTTTGATCATGGGAATAATGAACTTCCAACGAACGATCCGGTGTCGGAAATGGTGAAGCGAGAGAAAGCGCGAGTGAAGTTTGCTGAAACTGCTGTTCATGTGATTCCGTTCGTTTTGCTAATCTGCGCCATTGTTCTGTGGTTCTTCTCCAATCCAGGTATGTGAAAGTGAAAGTGAAGATGGTAATGGTAATGATTCTGCTTCTTGGAAGCTTGCGTTCCCGCCATTGATGATTGATTTTCATGAAAATTGAATGGAAATTCCCTCATTTTTTAACTCAAACTTAATTCCCTAATCCAAACAAATTAACTCATCACTTTCACTTCTCATAACACATAAATATATACCGACTTGAAAATTAAGTAAATAAATGTGTAATATATTCCTAACTCTACCAAATTAACCAAAATATATTAAAATATAACACCATCCAATTTTCAAATTTGGTAATTATCATTTATGACCATTACACGAATAATAATTGAGAATATAGCAACATTCGAAAAAAATAGCAAAACTATCGTTAATCTATAAGTTATAGACCAATATTACAACATGCTCTATGATATTATTTATAGAATTTAGCAAATTTTGCTATATTTGTAATTTTAAAAAATTGTTACTACATAGCTCTTATTTTGCTAACAAGTGTATCCCTCTCAAATTTTCACGTTTTGGTCAAAAATACAAAATATTTACCAAACTTTTTAAATTTCTTACAAATCTCTTTTGTATAAATAAATTTGAGTTTTATAAATAAATAAAATGATATTTTTTAAAATAGCAAAAAAAATTTGAATTGTGGTAGAATTTAAAAATTTTACTCAAACTATTTAGGGTAGCAAAATTTTAATCAACCAAAATTCCAAAATATCTCTTTTTTTTCTATAAAATATAAATACTTTTTATTTACTTTCAATTTTCTTCCATTTATGTAAATTTTCTTTTCAAAATTCATCTGAGACATAATTGTATTAAATTGTAAAATTATTTAATTCTTTTTGTTATATTTATAAATTAAACAGGTAAAATTTTAATTTTATGTTTAAATGTTAGAGGTTATATCTAGTTAATTTCAAAATTAGTGTTTAATGTTTTTTCTTTTTCTTTTTTTCTTGAAAAATTGATTTTTTACAAAGGTAGGTAAGATTATAATAGAAATTTATTTGTTTGGTTATTTACTTATTGTTGTAAACCTTTTCAAATTTTAAGTTTTTTTTTTTTAGAAAATTAATAAAAGTGTTTTTTTTTTCCTTTTGAAGATTAGCTTAAAGTTGAATGTAAATTTAGAAGAAGAAAAATGGAAAATGTATTAAGGAATATATGAGATAGCAAATTAACTATCTATATGTTTATAACAAAACAATGGAAATGATTATTGGATTGACAGTACTATTTTTCATTTTCCATTGAATAAAAAAACATTTTAAAAAATTTAAATATCATATAATCATTTGAAAAAAATCAAACATCCAATATTTTAGGATCTTATAATCCTATTTTCTAAAACTTATAAACTAAAATGTACATTTTGAAAATTCGATGAACTAATGGATCTATTGTTATAAACTTAAAGACTAAAAATATTCAATCTTCAAAATCACATATGAGACTAAAAACATAGTCTTTCATAAATATTTTATTTAGATAAATGAATTATTAGTTAATTTGATGTACACAATGTTCTGTATGATTGTTTTGATCTGTTTGAGTTTTTTTTTTTTGTTGTGTTTACTCTGTGTGGACGTAAGTAGATGTGGAGATGAGAGGAGCAACAACAACGGGCATAATAAGGAGCCTGACACTCGAAGGAGAATTTGAGAGTACCCAAACGGAGGCTCTTCCTACTTTCGATGGTCCTTTTTCCGACGCTTCAAGACTTCATGATACCATTTTTATATGATCGGTTCAATTAGAGGTTAAATTATCTTTATTATAAGCTCAAAGATTTGTGAGCCCATAAAGTTCATTCATTATATTTTTATATTAGTATATACAACAAAGTCATTTATTGACTATCTATTGTGATATACTGGTATCATGCTTCATCCCTCCTGGATAGACTAAAGTTCATTTATTTAAATTGTTGTTTTTTTAATGCTCTACTATATATCATATTAATCAA ATGTACCGATCAGTGAGCTGGAACCGATTCTCCGACGAATACTACTCGCATTCGGCCCCGTCCTCGAAGCCAGGGCAGTCACTGCGACTATCGTCGTCGTTTGATCATGGGAATAATGAACTTCCAACGAACGATCCGGTGTCGGAAATGGTGAAGCGAGAGAAAGCGCGAGTGAAGTTTGCTGAAACTGCTGTTCATGTGATTCCGTTCGTTTTGCTAATCTGCGCCATTGTTCTGTGGTTCTTCTCCAATCCAGATGTGGAGATGAGAGGAGCAACAACAACGGGCATAATAAGGAGCCTGACACTCGAAGGAGAATTTGAGAGTACCCAAACGGAGGCTCTTCCTACTTTCGATGGTCCTTTTTCCGACGCTTCAAGACTTCATGATACCATTTTTATATGA ATGTACCGATCAGTGAGCTGGAACCGATTCTCCGACGAATACTACTCGCATTCGGCCCCGTCCTCGAAGCCAGGGCAGTCACTGCGACTATCGTCGTCGTTTGATCATGGGAATAATGAACTTCCAACGAACGATCCGGTGTCGGAAATGGTGAAGCGAGAGAAAGCGCGAGTGAAGTTTGCTGAAACTGCTGTTCATGTGATTCCGTTCGTTTTGCTAATCTGCGCCATTGTTCTGTGGTTCTTCTCCAATCCAGATGTGGAGATGAGAGGAGCAACAACAACGGGCATAATAAGGAGCCTGACACTCGAAGGAGAATTTGAGAGTACCCAAACGGAGGCTCTTCCTACTTTCGATGGTCCTTTTTCCGACGCTTCAAGACTTCATGATACCATTTTTATATGA
BLAST of CSPI04G04230 vs. TrEMBL
Match: A0A0A0KZ80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025085 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 1.5e-69 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1
BLAST of CSPI04G04230 vs. TrEMBL
Match: A0A151T0Y6_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_023127 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 3.6e-26 Identity = 70/120 (58.33%), Postives = 83/120 (69.17%), Query Frame = 1
BLAST of CSPI04G04230 vs. TrEMBL
Match: M5X5J1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020111mg PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.1e-25 Identity = 70/128 (54.69%), Postives = 91/128 (71.09%), Query Frame = 1
BLAST of CSPI04G04230 vs. TrEMBL
Match: A0A0B2NV23_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_000659 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.4e-25 Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 1
BLAST of CSPI04G04230 vs. TrEMBL
Match: I1NHW0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G196700 PE=4 SV=2) HSP 1 Score: 124.0 bits (310), Expect = 1.4e-25 Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 1
BLAST of CSPI04G04230 vs. TAIR10
Match: AT5G61630.1 (AT5G61630.1 unknown protein) HSP 1 Score: 100.9 bits (250), Expect = 6.3e-22 Identity = 57/113 (50.44%), Postives = 74/113 (65.49%), Query Frame = 1
BLAST of CSPI04G04230 vs. TAIR10
Match: AT5G07490.1 (AT5G07490.1 unknown protein) HSP 1 Score: 92.0 bits (227), Expect = 2.9e-19 Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 1
BLAST of CSPI04G04230 vs. TAIR10
Match: AT2G35658.2 (AT2G35658.2 unknown protein) HSP 1 Score: 63.2 bits (152), Expect = 1.5e-10 Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = 1
BLAST of CSPI04G04230 vs. TAIR10
Match: AT4G16840.1 (AT4G16840.1 unknown protein) HSP 1 Score: 55.1 bits (131), Expect = 4.0e-08 Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 1
BLAST of CSPI04G04230 vs. NCBI nr
Match: gi|778690315|ref|XP_011653100.1| (PREDICTED: uncharacterized protein LOC105435175 [Cucumis sativus]) HSP 1 Score: 270.0 bits (689), Expect = 2.2e-69 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1
BLAST of CSPI04G04230 vs. NCBI nr
Match: gi|659107769|ref|XP_008453849.1| (PREDICTED: uncharacterized protein LOC103494452 [Cucumis melo]) HSP 1 Score: 204.1 bits (518), Expect = 1.5e-49 Identity = 105/132 (79.55%), Postives = 108/132 (81.82%), Query Frame = 1
BLAST of CSPI04G04230 vs. NCBI nr
Match: gi|1012349525|gb|KYP60715.1| (hypothetical protein KK1_023127 [Cajanus cajan]) HSP 1 Score: 125.9 bits (315), Expect = 5.2e-26 Identity = 70/120 (58.33%), Postives = 83/120 (69.17%), Query Frame = 1
BLAST of CSPI04G04230 vs. NCBI nr
Match: gi|657969296|ref|XP_008376365.1| (PREDICTED: uncharacterized protein LOC103439581 [Malus domestica]) HSP 1 Score: 125.2 bits (313), Expect = 8.8e-26 Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 1
BLAST of CSPI04G04230 vs. NCBI nr
Match: gi|645257527|ref|XP_008234452.1| (PREDICTED: uncharacterized protein LOC103333399 [Prunus mume]) HSP 1 Score: 124.4 bits (311), Expect = 1.5e-25 Identity = 70/128 (54.69%), Postives = 91/128 (71.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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