Carg07939 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07939
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	la-related protein 1C
Location	Cucurbita_argyrosperma_scaffold_066 : 836662 .. 843123 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGAATAGAAAGAGAGAGAAACGTTTTAATTTCTTTGTTTGTTTCTTTTAGAGAGAGAGAGAGACCTCTCTGCTTCTTAGACCTCTGCCCAGACCTACGTCTCTTCTCTTTTTCTCTATGCGATCCGATCGCTCAATCTTTTGAAAATCCTTCAGATTAATTTGTTCGATTCATATTTTTTTAAAATTCTTAGCAGTTGTTAGTTCTTCGAAAAATCAAAAACAAATTTGTTTTGATCTTATTGCTTAATTTTATTTTACTTTTTGCACTGTTTGCCGTTGATCAAGGTACTGCCATCTGAAAGAAACCCTAATTTTATAATTTATGATGGCTGCTTCTAATTTACCTGTCGCTGATTCGGCGGCGGCATCGAGTGTCAATCAGTCTCCTCGTAATTCTGGGCAGAATTACGGCAGTCGCAGCCCCAAATCATCATCACGTCGCTCTGGTGGACGCACAGTGTCTTCTTCTCCGTGGACCCAGATTGTTCGCGGTGAAATGGACATGGCGGCGGCTGTTTCGTCATCTGCATCCCCGACTACTGTTATTGAACCGATATCGTTTTCGTCTTCTTCTTCGTCTGAGGAGCCACTGAGTGAGAGTTTGGATGGCGGAAATGGGTCGTCTGCCAATGTTGCTGGAAAGAAGCCTGCGTGGAATAAGCTCTCTAATGGAACTGAGGCTGGGCCTGTCATGGGGGCTGTGTCTTGGCCCGCTCTGTCGGAATCTGCCAAGAGCACACCTAAATCATCTTCGGATTCACTTAAAAGTTTAGGGGATGGATCCACTGGCGCGCAGGTTATTTTCTATCAATTTTCTATTTGTTGTAATGGCACGTGCTGGAAAAATGAAAATGATAGATTCAGTTTGTTTGTAGGGATAAATGTTCAAACTACTGCAGTCTATCTACATGATTAAGCTAAATCTTTCTACTTTTTCTGACATTAAAATGATAGATTTATCAATAGGTTCAAGAAATTGTTTCCTGGGTTAGTCTGCATATTCTCCTCGAATAGGTTGGTTAATTAACCATGTTCTCCATGGCTCAATTATTGACTTAATATCTGTCTTGTTATCTAATAGAGTGGTCGTCACTCTTGCACATTTTGTTTATTTTGTTTATCTTGTTATTACGTAAAGCTTTGATCAATTAGCTATGTTCTTTGGAAGGCAAAACATGGAAAGAGGATGAAATTTCTGTTGAAATTCCCAATTAAGCCACTCTTTGCCTAATTTCCTTGTTGAATTAGTAGAAATATCATTTTTGTTTTTATAAATTTCATACAACATTGAAATTTATTTTCTTGCGAAGAAAAATAAAGACTACCAAGATATAGGCATATAGAGTTAGTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGGTTTACCATGAATGTATGGGAGGGTCTTGACTTATTTATTTATGTTTTTTAAACATTTTTTTGGTACTAGTATTTTTTTTTTTTTTTTTTACTTATAGGGGACTGGAACTCCGTCTTCCTCATCAAACAAAGAAGGTAATAATGATGTCAGACCCAATCCTGATTCATCTCTTACTCATCCAATAACCTCACGCCAGAAATCAATGAGGCGTAGTGGTTCAGGTAATTCATATAATAGTGGCCTCCCCCAACAGTCGGCACCTTCAAGTCCTATAATTGATCCAGCTCCTAATAATTCTTCAAAGGATCAGACAGAGAGAAGTACATTTGCATCACCATCACATAATGATCATGGTCATCAACAACCACGTTACTCATTTCGTAGTCGTGGTGGTTCACATCCACGTGGTGATAATTCCCATCATCATAACTATGGTTCTAGACGTGATCACGATCGTGGAAATCAAGATTGGAATTCAAATAGAAATTTTAATGCACAACCTCATAGAGTTGTTCACAGGTTTATTAGACCTTCTCCACCTCCACCTCCTAATACTGCTGCCTTTATTTCTGCTCCACCAATGAGGCCTATTGGGGGTCCATTATCCTTCCCTGGTAGGCTCTACATTTGTTTTGTGAGGTATCATGATTTTTTGAATGCGAACTTATTTAATGCTTGAATCTTTTTGTAGATTTTGCATCTCCTCCAATGGTATATGTTGGTCCTCCTCCTCCAGAGGCTCTTAGAGGTGTACCTTATGTCACTTCAATACCACCCAACGCAATGTTTTTTCACCCAGACCCTCAGTTGTATGCTATGATAGTGAGTCAGATAGAATACTATTTCAGGTATATTTGATGTGGTAGCTTTTAACCTTTTCGTATCATCCTTGTCTAGGTGTTAAGAGTTTTGAAAACTTTTTAATGGTTACTGCACCTTATATCTGTGAATTGCAGTGGTCAAAATTTAATAAAAGACACTTTCTTGAGAAAGAACATGAATGAAGAGGGATGGGTTCCAATTAGACTAATAGCATCCTTCAACAAGGTGAGTTGCTTATCTTACCAAGAATGTATAACTACTTTTTTTTACTAGGATGTCCAGATGATCTTCATTTTCTGTTAGGTTTCTGCCTTGTGCAGTGTCTATGCATGTTTTCCCTGGTAAATATTTTTAGGAAAAACTGTCTATGCAAGGTGAGTTGTCTATGCATGTTAGGTTTCTGCCTTGAGCTTTTCAAAAAAATTTAAAAATGTGTTCCTTTACTTTCTTTATACTCTGCGTTCCTTTGAAACTGTTCTAAAGAAAAGTTCTAGTGAAATTTTTGCAATCGTTCTTGGAATTTCGATTTACTTTCTGCTATATTGTACATTTTCTAAAAAAATGTTATGAAAAGTCATTTTGCCCGATTAATTTTTCCAGATTGTTTTTCTGATTTGAAAACTGTTGGGAAGATACTTTTTTCCTGCTTTCTTTTACCTCTACATATATATCAAATTATGCTTAGGAAATTACGCGATGATTATATATAAGCTGTGTAGGCATTGAGAACTCATAATAAAAATTGTTGCACCTCTGCCTGAATGTTGTTTCTCTTCTGTATTTTTGGGTTCCGAAAACATTTTTAAAAATATATCATGTTAACTCTTTTGATTAAAAAAAAAAAAAAAAAAACTTTTATTTTTGAAATCAGATTTTTTTAGACTCGGTTCTCAAAATGTCTCTTTATGATTTATTAAATATGTCAATAGTGCATCTCACAAAGAAAAAAAAGGCTGCTACAGCAAGAAGAAAATAGAATTAGTTGATTACTGAAATAGCTGGAGAATTAAAATATTGGTTCTGATTTTGGAGATTCAAATTTATCTGATTAAAGATATCGATTTGTAGCATCAGAGTGAATTTAGAATAGAATTTTGTGTCTGATGACATGAGGAGGCTGAATTTTTACATAGCTTTACCCTATGGTCAATGAAGTACAGGTGTTAATTTTTGTAGCTTCCTTGTATGATTGTTATGTCATTTCCCGTCCTTTTATGAACCTTCATCCTGCATGTCACATTTTTTGCACTTTGTGGAAAAGGAGCTTTGCCAGACCGCATTAGTTAAATATAGCATGCATGTTTTATTTTTTTCAAGAATTTTATGTCAATGACATGATTGGTGTGGGATATGAACGGAAATGTTGACATTGTGATGTGATGTGTTGTAGATATTTAATTGTATTTCATTTACAAATGGGCGTTGGGACATTTTTAAGAGTGATTTGCTTAAGTTATTCAATGATTTTATGAGATATGGATCAATACTTGATCATGAGTGATATTAAGGGTTTTAGGCCGGACAGCTTAGTGACAAGCCTTCAAAAATATCATTTCTTAGTCTTTGACTAAGAGAATGTTGAAGGCTTAGACGGCGTCTTTATCAGATGAGGTTGAGGGTTATTATAGACCTCACTATCTGTTGGTCATCTTTAAGAAGATTGATTTTGAGAATGTTATGGTCATGTCGACTGGGATATCAGATGAGGTCCCTAGGGACGAAAGTTTTTGTCTCAATTTAGAACTTGAGTAGGCCACTCCTGTACTTCGATAACTTTTCCATCTTATTAAAGGGAGATCGTAGTTTTCTTCTCCCTAAGGTCTTTGTAGTCATCAGTTACTAACCCCTTTTATAATTATGATCTTGGTTTGTTGTATTGGAGTTCGTTTCTGTAATTAGCTTTTGGACTCTCTTTTGTTGGTGGGTTTGTTTTTTGTAAGCTCAGTTTCTTACTAAAAGAAAAAACATTCTTAATAGCTTTATTACAAGGGAGATGTGTAGAGGCTTGACCGATTATAGTGGGGTGGCTGAAGTTACAGTGCATCTTACTCAGTGTTGGTGATACCATCTTTTTCTGTACTAGGGAAGAGCCCTTTGTCCATTTTAGTAGGATTCTTCACATACTTAAGTTAGTCTTCTAGCTTTAAATTAGTTGGGATAAGTGTTTCATTGTCAATGTAACGTGGAGTTTGGGACCTTATTTCTCCCCTTAAAGTAGCTAAGCTGGCCCTCTTGAAACTTAGTGTATAAGGAATCATTGCAAGGGAAGTAAGATTCAAATTACCTTGTTGATTAAATATCTCAAGACAAGAACACTTGTTTGAGATTCGAATCACTCCACAAGCAAAATCAATCATGTCTAGCTTGAATGTTATTCTAAACATGCAATCTAAACTACATAGAATTTGCAAAGGAAAGGTAAGACACTTGGCCCTAATGATAAAGAATCACTTAAAATTCAGATTATCTTGTTGATCAAATATCTTAAGGAAAAAACACTTGTGTGAGATTCGAATCACTCCACAAGCAAGATTGATTATGTCAAGTTTGAATGATTCTATACGCAACCTAAACTACATAGAATTGCAAAGAAACTTAGCTATTGGCTAAAAGAAAGCACAAATGCTCCTTGTACAACATTTTCCAAATCCCCTTTACAAAGGTAACATACTTGACTTTATATAGTCTCAAAATGAAACTCTTGACCCTCCATGAGACATTTCAAGAGTTTGTAACTTTCATACTTTAGGACCATGATTAGCCACTATGTATACTTTATGATATAATTAGCCACTCTTTAAACGCAACTTTAAAGTAAACAAAGTCTTAAAATACATTAATGAAATACAATAACTCTAAGTCATCATCCTCATAAATTTGTAACCATTTAAGAATAAATGAAGCCCCACTTAAACTATCTTGAAGCTTTTGTTACATAAATGAAGTTTGATTCTTCTCAACGTGGCATTAATATTCAGTTTTATTAATATTCATTTGTCTTTTTATTATAAATAATTGTTGTGTGTGATCTAGTAAGAGGAGAAGAAGAAGAGGAAGAGTTTTGAGTACACTTTTGGAATTACTATTTGAGTTTTTGTTGTGTGCCTCTTTTTGCTCGGTTTTGTTAGTTTTTCCCCTTTCTTTTTTGTTCTTTTCTACTTCCGATCTCCTTGATGAAAGCAGTTCTTTTCCATAAAAAAAAGTACTTGCATGATTGACTGCAAGGTCGGTGGTTCTGTGCTTTCTGAGATAATTGTGAAGAATGACTTCTATCATGTAGCTTCTATAATTTCTTCCATCATTCAATAGCCATATTTTCTTTTTATATCGCTAAATCATGTAACTCAAAATGGAGGTTATATGAATAAATCTGGGGACCAGAATGCATGATATTGTTTTTATCCTTCAGAATATGTCATCTGGGCACTCTTTTGTAGGTTAAACGTCTGACTGAAAGTATCCCAATTATATTGGATGCATTGCAATCATCTTCACTTGTGGAAGTAAAGGTCAGTAGTCATCAGCTCCTGAACGAGCCTTTTCCTCTATCTATAATTGGAGACTTTAAGTTGGGAAAACTCGCTGCTAAATGGATTTGCATCCTTAAAATGTAGTAATAGTAGTGATGGGGATAGACAAGTAAAATTTCAAATCATTTTTCTCTTATTCTTGTATATATGAACACTTTTTTTTTTTTTTTTTTTTTTTGGCTTGCTCTTAGGGAGAGACGGTAAGGAGGCGTAATGATTATGACAGATGGATTATTCGACCTGGTGAAATTCCTGATGTTGCAGGCCCATTAAGCCCAGGAAGTTCCAATCAGGATATGTTGGCAGCTGGTGTTCAAACTATTGCGCTAGAGAATATTAATCATAGGGTATCTGAAGGTGGGCAGGGTGCTGTTCATGTTGAGGCACACCAAAGTAGTAGGCCATCTGGAAATTTGAGTACGCACGCACAGCCATATGGTGATAATGGTACAGACCAAGTAAATACCAAGGCAGGTTCATATCATTCATCTTCTGAAAGGAGTTAGACCAAGAACTTGTGCTGTGAACCCGTGTCCTTCTGAATGAAAACTAGATGTGGGTAGTAGAGATTGAGGAGATGTTAGTGGACACGGTTTGCTTAACAACAATTCTCTTCTCGTGATGCCAAGTAAATTGGTGGGACTGAAGTTGAAGAAGAGGAACAATAATGAAAAGATAAAGGGAAAAAGAAGAAAAAAAACTTAAATTAAAACTTAAACTTC

mRNA sequence

AATGAATAGAAAGAGAGAGAAACGTTTTAATTTCTTTGTTTGTTTCTTTTAGAGAGAGAGAGAGACCTCTCTGCTTCTTAGACCTCTGCCCAGACCTACGTCTCTTCTCTTTTTCTCTATGCGATCCGATCGCTCAATCTTTTGAAAATCCTTCAGATTAATTTGTTCGATTCATATTTTTTTAAAATTCTTAGCAGTTGTTAGTTCTTCGAAAAATCAAAAACAAATTTGTTTTGATCTTATTGCTTAATTTTATTTTACTTTTTGCACTGTTTGCCGTTGATCAAGGTACTGCCATCTGAAAGAAACCCTAATTTTATAATTTATGATGGCTGCTTCTAATTTACCTGTCGCTGATTCGGCGGCGGCATCGAGTGTCAATCAGTCTCCTCGTAATTCTGGGCAGAATTACGGCAGTCGCAGCCCCAAATCATCATCACGTCGCTCTGGTGGACGCACAGTGTCTTCTTCTCCGTGGACCCAGATTGTTCGCGGTGAAATGGACATGGCGGCGGCTGTTTCGTCATCTGCATCCCCGACTACTGTTATTGAACCGATATCGTTTTCGTCTTCTTCTTCGTCTGAGGAGCCACTGAGTGAGAGTTTGGATGGCGGAAATGGGTCGTCTGCCAATGTTGCTGGAAAGAAGCCTGCGTGGAATAAGCTCTCTAATGGAACTGAGGCTGGGCCTGTCATGGGGGCTGTGTCTTGGCCCGCTCTGTCGGAATCTGCCAAGAGCACACCTAAATCATCTTCGGATTCACTTAAAAGTTTAGGGGATGGATCCACTGGCGCGCAGGGGACTGGAACTCCGTCTTCCTCATCAAACAAAGAAGGTAATAATGATGTCAGACCCAATCCTGATTCATCTCTTACTCATCCAATAACCTCACGCCAGAAATCAATGAGGCGTAGTGGTTCAGGTAATTCATATAATAGTGGCCTCCCCCAACAGTCGGCACCTTCAAGTCCTATAATTGATCCAGCTCCTAATAATTCTTCAAAGGATCAGACAGAGAGAAGTACATTTGCATCACCATCACATAATGATCATGGTCATCAACAACCACGTTACTCATTTCGTAGTCGTGGTGGTTCACATCCACGTGGTGATAATTCCCATCATCATAACTATGGTTCTAGACGTGATCACGATCGTGGAAATCAAGATTGGAATTCAAATAGAAATTTTAATGCACAACCTCATAGAGTTGTTCACAGGTTTATTAGACCTTCTCCACCTCCACCTCCTAATACTGCTGCCTTTATTTCTGCTCCACCAATGAGGCCTATTGGGGGTCCATTATCCTTCCCTGATTTTGCATCTCCTCCAATGGTATATGTTGGTCCTCCTCCTCCAGAGGCTCTTAGAGGTGTACCTTATGTCACTTCAATACCACCCAACGCAATGTTTTTTCACCCAGACCCTCAGTTGTATGCTATGATAGTGAGTCAGATAGAATACTATTTCAGTGGTCAAAATTTAATAAAAGACACTTTCTTGAGAAAGAACATGAATGAAGAGGGATGGGTTCCAATTAGACTAATAGCATCCTTCAACAAGGTTAAACGTCTGACTGAAAGTATCCCAATTATATTGGATGCATTGCAATCATCTTCACTTGTGGAAGTAAAGGGAGAGACGGTAAGGAGGCGTAATGATTATGACAGATGGATTATTCGACCTGGTGAAATTCCTGATGTTGCAGGCCCATTAAGCCCAGGAAGTTCCAATCAGGATATGTTGGCAGCTGGTGTTCAAACTATTGCGCTAGAGAATATTAATCATAGGGTATCTGAAGGTGGGCAGGGTGCTGTTCATGTTGAGGCACACCAAAGTAGTAGGCCATCTGGAAATTTGAGTACGCACGCACAGCCATATGGTGATAATGGTACAGACCAAGTAAATACCAAGGCAGGTTCATATCATTCATCTTCTGAAAGGAGTTAGACCAAGAACTTGTGCTGTGAACCCGTGTCCTTCTGAATGAAAACTAGATGTGGGTAGTAGAGATTGAGGAGATGTTAGTGGACACGGTTTGCTTAACAACAATTCTCTTCTCGTGATGCCAAGTAAATTGGTGGGACTGAAGTTGAAGAAGAGGAACAATAATGAAAAGATAAAGGGAAAAAGAAGAAAAAAAACTTAAATTAAAACTTAAACTTC

Coding sequence (CDS)

ATGATGGCTGCTTCTAATTTACCTGTCGCTGATTCGGCGGCGGCATCGAGTGTCAATCAGTCTCCTCGTAATTCTGGGCAGAATTACGGCAGTCGCAGCCCCAAATCATCATCACGTCGCTCTGGTGGACGCACAGTGTCTTCTTCTCCGTGGACCCAGATTGTTCGCGGTGAAATGGACATGGCGGCGGCTGTTTCGTCATCTGCATCCCCGACTACTGTTATTGAACCGATATCGTTTTCGTCTTCTTCTTCGTCTGAGGAGCCACTGAGTGAGAGTTTGGATGGCGGAAATGGGTCGTCTGCCAATGTTGCTGGAAAGAAGCCTGCGTGGAATAAGCTCTCTAATGGAACTGAGGCTGGGCCTGTCATGGGGGCTGTGTCTTGGCCCGCTCTGTCGGAATCTGCCAAGAGCACACCTAAATCATCTTCGGATTCACTTAAAAGTTTAGGGGATGGATCCACTGGCGCGCAGGGGACTGGAACTCCGTCTTCCTCATCAAACAAAGAAGGTAATAATGATGTCAGACCCAATCCTGATTCATCTCTTACTCATCCAATAACCTCACGCCAGAAATCAATGAGGCGTAGTGGTTCAGGTAATTCATATAATAGTGGCCTCCCCCAACAGTCGGCACCTTCAAGTCCTATAATTGATCCAGCTCCTAATAATTCTTCAAAGGATCAGACAGAGAGAAGTACATTTGCATCACCATCACATAATGATCATGGTCATCAACAACCACGTTACTCATTTCGTAGTCGTGGTGGTTCACATCCACGTGGTGATAATTCCCATCATCATAACTATGGTTCTAGACGTGATCACGATCGTGGAAATCAAGATTGGAATTCAAATAGAAATTTTAATGCACAACCTCATAGAGTTGTTCACAGGTTTATTAGACCTTCTCCACCTCCACCTCCTAATACTGCTGCCTTTATTTCTGCTCCACCAATGAGGCCTATTGGGGGTCCATTATCCTTCCCTGATTTTGCATCTCCTCCAATGGTATATGTTGGTCCTCCTCCTCCAGAGGCTCTTAGAGGTGTACCTTATGTCACTTCAATACCACCCAACGCAATGTTTTTTCACCCAGACCCTCAGTTGTATGCTATGATAGTGAGTCAGATAGAATACTATTTCAGTGGTCAAAATTTAATAAAAGACACTTTCTTGAGAAAGAACATGAATGAAGAGGGATGGGTTCCAATTAGACTAATAGCATCCTTCAACAAGGTTAAACGTCTGACTGAAAGTATCCCAATTATATTGGATGCATTGCAATCATCTTCACTTGTGGAAGTAAAGGGAGAGACGGTAAGGAGGCGTAATGATTATGACAGATGGATTATTCGACCTGGTGAAATTCCTGATGTTGCAGGCCCATTAAGCCCAGGAAGTTCCAATCAGGATATGTTGGCAGCTGGTGTTCAAACTATTGCGCTAGAGAATATTAATCATAGGGTATCTGAAGGTGGGCAGGGTGCTGTTCATGTTGAGGCACACCAAAGTAGTAGGCCATCTGGAAATTTGAGTACGCACGCACAGCCATATGGTGATAATGGTACAGACCAAGTAAATACCAAGGCAGGTTCATATCATTCATCTTCTGAAAGGAGTTAG

Protein sequence

MMAASNLPVADSAAASSVNQSPRNSGQNYGSRSPKSSSRRSGGRTVSSSPWTQIVRGEMDMAAAVSSSASPTTVIEPISFSSSSSSEEPLSESLDGGNGSSANVAGKKPAWNKLSNGTEAGPVMGAVSWPALSESAKSTPKSSSDSLKSLGDGSTGAQGTGTPSSSSNKEGNNDVRPNPDSSLTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTFASPSHNDHGHQQPRYSFRSRGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFNAQPHRVVHRFIRPSPPPPPNTAAFISAPPMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVTSIPPNAMFFHPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTESIPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQDMLAAGVQTIALENINHRVSEGGQGAVHVEAHQSSRPSGNLSTHAQPYGDNGTDQVNTKAGSYHSSSERS

Homology

[Close]

BLAST of Carg07939 vs. NCBI nr
Match: XP_023517528.1 (la-related protein 1C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 896.7 bits (2316), Expect = 3.8e-257
Identity = 500/541 (92.42%), Postives = 501/541 (92.61%), Query Frame = 0


Query: 1   MMAASNLPVADSAAASSVNQSPRNSGQNYGSXXXXXXXXXXXXXXXXSSPWTQIVRGEMD 60
           MMAASNLPVADSAAASSVNQSPRNSGQNYGS  XXXXXXXXXXX   SSPWTQIVRGEMD
Sbjct: 1   MMAASNLPVADSAAASSVNQSPRNSGQNYGSRSXXXXXXXXXXXTVSSSPWTQIVRGEMD 60

Query: 61  MAAAVSSSASPTTVIEPISXXXXXXXXXPLSESLDGGNGSSANVAGKKPAWNKLSNGTEA 120
           MAAAVSSSASPTTVIEPIS  XXXXX  PLSESLDGGNG S NVAGKKPAWNKLSNGTEA
Sbjct: 61  MAAAVSSSASPTTVIEPISFSXXXXXEEPLSESLDGGNGLSVNVAGKKPAWNKLSNGTEA 120

Query: 121 GPVMGAVSWPALSESAKSTPKSSXDSLKSLGDGSTGAQGTGTPSSSSNKEGNNDVRPNPD 180
           GPVMGAVSWPALSESAK TPKS X                        KEGNNDVRPNPD
Sbjct: 121 GPVMGAVSWPALSESAKGTPKSXXXXXXXXXXXXXXXXXXXXXXXXXXKEGNNDVRPNPD 180

Query: 181 SSLTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTFASPSH 240
           SSLTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTFASPSH
Sbjct: 181 SSLTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTFASPSH 240

Query: 241 NDHGHQQPRYSFRSRGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFNAQPHRVVHRF 300
           NDHGHQQPRYSFRSRG SHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFNAQPHRVVHRF
Sbjct: 241 NDHGHQQPRYSFRSRGVSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFNAQPHRVVHRF 300

Query: 301 IRPSPXXXXXXXAFISAPPMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVTSIPPN 360
           IRPSPXXXXXXXAFISAPPMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVTSIPPN
Sbjct: 301 IRPSPXXXXXXXAFISAPPMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVTSIPPN 360

Query: 361 AMFFHPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTES 420
           AMFFHPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTES
Sbjct: 361 AMFFHPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTES 420

Query: 421 IPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQDMLAAGVQT 480
           IPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQDMLAAGVQT
Sbjct: 421 IPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQDMLAAGVQT 480

Query: 481 IALENINHRVSEGGQGAVHVEAHQSSRPSGNLSTHAQPYGDNGTDQVNTKAGSYHSSSER 540
           IALENINHRVSEGGQGAVHVEAHQSSRPSGN+S HAQPYGDNGTDQVNTKAGS HSSSER
Sbjct: 481 IALENINHRVSEGGQGAVHVEAHQSSRPSGNMSMHAQPYGDNGTDQVNTKAGSDHSSSER 540

Query: 541 S 542
           S
Sbjct: 541 S 541

[Close]

BLAST of Carg07939 vs. NCBI nr
Match: XP_022926424.1 (la-related protein 1C-like [Cucurbita moschata])

HSP 1 Score: 859.4 bits (2219), Expect = 6.7e-246
Identity = 493/541 (91.13%), Postives = 493/541 (91.13%), Query Frame = 0


Query: 1   MMAASNLPVADSAAASSVNQSPRNSGQNYGSXXXXXXXXXXXXXXXXSSPWTQIVRGEMD 60
           MMAASNLPVADSAAASSVNQSPRNSGQNYGSXXXXXXXXXXXXXXXXSSPWTQIVRGEMD
Sbjct: 1   MMAASNLPVADSAAASSVNQSPRNSGQNYGSXXXXXXXXXXXXXXXXSSPWTQIVRGEMD 60

Query: 61  MAAAVSSSASPTTVIEPISXXXXXXXXXPLSESLDGGNGSSANVAGKKPAWNKLSNGTEA 120
           MAAAV              XXXXXXXXXPLSESLDGGN SSANVAGKKPAWNKLSNGTEA
Sbjct: 61  MAAAVXXXXXXXXXXXXXXXXXXXXXXXPLSESLDGGNWSSANVAGKKPAWNKLSNGTEA 120

Query: 121 GPVMGAVSWPALSESAKSTPKSSXDSLKSLGDGSTGAQGTGTPSSSSNKEGNNDVRPNPD 180
           GPVMGAVSWPALSESAK TP   X                            NDVRPNPD
Sbjct: 121 GPVMGAVSWPALSESAKGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDVRPNPD 180

Query: 181 SSLTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTFASPSH 240
           SSLTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTFASPSH
Sbjct: 181 SSLTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTFASPSH 240

Query: 241 NDHGHQQPRYSFRSRGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFNAQPHRVVHRF 300
           NDHGHQQPRYSFRSRGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFNAQPHRVVHRF
Sbjct: 241 NDHGHQQPRYSFRSRGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFNAQPHRVVHRF 300

Query: 301 IRPSPXXXXXXXAFISAPPMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVTSIPPN 360
           IRPSPXXXXXXXAFISAPPMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVTSIPPN
Sbjct: 301 IRPSPXXXXXXXAFISAPPMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVTSIPPN 360

Query: 361 AMFFHPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTES 420
           AMFFHPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTES
Sbjct: 361 AMFFHPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTES 420

Query: 421 IPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQDMLAAGVQT 480
           IPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQDMLAAGVQT
Sbjct: 421 IPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQDMLAAGVQT 480

Query: 481 IALENINHRVSEGGQGAVHVEAHQSSRPSGNLSTHAQPYGDNGTDQVNTKAGSYHSSSER 540
           IALENINHRVSEGGQGAVHVEAHQSSRPSGNLSTHAQPYGDNGTDQVNTKAGS HSSSER
Sbjct: 481 IALENINHRVSEGGQGAVHVEAHQSSRPSGNLSTHAQPYGDNGTDQVNTKAGSDHSSSER 540

Query: 541 S 542
           S
Sbjct: 541 S 541

[Close]

BLAST of Carg07939 vs. NCBI nr
Match: XP_023003871.1 (la-related protein 1C-like [Cucurbita maxima])

HSP 1 Score: 850.9 bits (2197), Expect = 2.4e-243
Identity = 484/541 (89.46%), Postives = 487/541 (90.02%), Query Frame = 0


Query: 1   MMAASNLPVADSAAASSVNQSPRNSGQNYGSXXXXXXXXXXXXXXXXSSPWTQIVRGEMD 60
           MMAASNLPVAD AAASSVNQSPRNSGQNYGS XXXXXXXXXXXXXX SSPWTQIVRGEMD
Sbjct: 1   MMAASNLPVADLAAASSVNQSPRNSGQNYGSRXXXXXXXXXXXXXXSSSPWTQIVRGEMD 60

Query: 61  MAAAVSSSASPTTVIEPISXXXXXXXXXPLSESLDGGNGSSANVAGKKPAWNKLSNGTEA 120
           MAAAVSSSASPTTVIEPISXXXXXXXXXPLSESLDGGNGSSANV+GKKPAWNKLSNGTEA
Sbjct: 61  MAAAVSSSASPTTVIEPISXXXXXXXXXPLSESLDGGNGSSANVSGKKPAWNKLSNGTEA 120

Query: 121 GPVMGAVSWPALSESAKSTPKSSXDSLKSLGDGSTGAQGTGTPSSSSNKEGNNDVRPNPD 180
           GPVMGAV                X                         EGNNDVRPNPD
Sbjct: 121 GPVMGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGNNDVRPNPD 180

Query: 181 SSLTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTFASPSH 240
           S+LTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTFASPSH
Sbjct: 181 SALTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTFASPSH 240

Query: 241 NDHGHQQPRYSFRSRGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFNAQPHRVVHRF 300
           NDH HQQPRYSFRSRGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFN QPHRVVHRF
Sbjct: 241 NDHVHQQPRYSFRSRGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFNVQPHRVVHRF 300

Query: 301 IRPSPXXXXXXXAFISAPPMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVTSIPPN 360
           IRPSPXXXX   AFISAP MRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVTSIPPN
Sbjct: 301 IRPSPXXXXNTAAFISAPSMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVTSIPPN 360

Query: 361 AMFFHPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTES 420
           AMFFHPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTES
Sbjct: 361 AMFFHPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTES 420

Query: 421 IPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQDMLAAGVQT 480
           IPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQDMLAAGVQT
Sbjct: 421 IPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQDMLAAGVQT 480

Query: 481 IALENINHRVSEGGQGAVHVEAHQSSRPSGNLSTHAQPYGDNGTDQVNTKAGSYHSSSER 540
           IALEN NHRVSEGGQGAVHV+AHQSSRPSGNLS HAQPYGDNGTDQVNTK GS HSSSER
Sbjct: 481 IALENTNHRVSEGGQGAVHVDAHQSSRPSGNLSMHAQPYGDNGTDQVNTKEGSDHSSSER 540

Query: 541 S 542
           S
Sbjct: 541 S 541

[Close]

BLAST of Carg07939 vs. NCBI nr
Match: XP_008440860.1 (PREDICTED: la-related protein 1C [Cucumis melo])

HSP 1 Score: 719.5 bits (1856), Expect = 8.3e-204
Identity = 420/550 (76.36%), Postives = 464/550 (84.36%), Query Frame = 0


Query: 2   MAASNLPVADSAAASSVNQSPRNS---GQNYGSXXXXXXXXXXXXXXXXSSPWTQIVRGE 61
           MAASNLP ADS  AS  + SPRNS         XXXXXXXXXXXXXXXX  PWT+IVRGE
Sbjct: 1   MAASNLPDADSVTASIADHSPRNSXXXXXXXXXXXXXXXXXXXXXXXXXXXPWTRIVRGE 60

Query: 62  MDMAAAVSSSASPTTVIEPISXXXXXXXXXPLSESLDGGNGSSANVAGKKPAWNKLSNGT 121
           +D+AA VSSSASPT V+EP+S         P+ ES DGGNGS+AN AGKKPAWNKL+NGT
Sbjct: 61  IDVAAVVSSSASPTAVVEPVS--FFSSSEEPVGESYDGGNGSTAN-AGKKPAWNKLANGT 120

Query: 122 EAGPVMGAVSWPALSESAKSTPKSSXDSLKSLGDGSTGAQGTGTPSSS-SNKEGNNDVRP 181
           EAGPVMGAVSWPALSESAK+TPKSS DSLKSLGDGSTGAQGTGT SS+ SNKEGNNDV P
Sbjct: 121 EAGPVMGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSP 180

Query: 182 NPDSSLTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTF-A 241
           NPDS+L HPITSRQKSMRR+GS NSYNS LPQQSAPSSP+ID APNNSSKDQT+R+TF +
Sbjct: 181 NPDSTLAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDQTQRTTFVS 240

Query: 242 SPSHNDHGHQQPRYSFRSR-GGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFNAQPHR 301
           S SHNDHGHQQPR SFRSR GGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN+NAQPHR
Sbjct: 241 SQSHNDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHR 300

Query: 302 VVHRFIRPSPXXXXXXXAFISAPPMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVT 361
           VVHRFIRPSPXXXX    +IS+P MR IGGPL FPDFA PP+VY+GPPPPEALRGVP+V 
Sbjct: 301 VVHRFIRPSPXXXXNTTGYISSPTMRAIGGPLPFPDFA-PPVVYIGPPPPEALRGVPFVA 360

Query: 362 SIPPNAMFFH-PDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKV 421
            I PNAMFFH PDPQLYAMIVSQIEYYFSG+NLIKDTFLR+NMNEEGWVP++LIASF+KV
Sbjct: 361 PISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKV 420

Query: 422 KRLTESIPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAG---PLSPGSSNQ 481
           +RLTE+I  ILDALQSS++VEVKG+TVRRR+DYDRWIIRPG++P+++G   PLSPGSSNQ
Sbjct: 421 QRLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQ 480

Query: 482 DMLAAGVQTIALENINHRVSEGGQGAVHVEAHQSSRPSGNLSTHAQPYGDNGTDQVNTKA 541
           DMLA GVQ IALEN+NH+VSEGGQG VHV+                 +GD+     NTKA
Sbjct: 481 DMLAGGVQGIALENVNHKVSEGGQGEVHVD--------------EASHGDS-----NTKA 527

[Close]

BLAST of Carg07939 vs. NCBI nr
Match: XP_023522714.1 (la-related protein 1C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 709.1 bits (1829), Expect = 1.1e-200
Identity = 432/550 (78.55%), Postives = 448/550 (81.45%), Query Frame = 0


Query: 2   MAASNLPVADSAAASSVNQSPRNSGQNYGSXXXXXXXXXXXXXXXXSSPWTQIVRGEMDM 61
           MAAS LP ADS  AS               XXXXXXXXXXXXXXX SSPW QIVRGE+D 
Sbjct: 1   MAASTLPDADSVTAS--XXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSPWNQIVRGELDT 60

Query: 62  AAAV--SSSASPTTVIEPISXXXXXXXXXPLSESLDGGNGSSANVAGKKPAWNKLSNGTE 121
           AAAV                XXXXXXX  P+ E  DGGNGSSAN AGKKP WNKL+NGTE
Sbjct: 61  AAAVXXXXXXXXXXXXXXXXXXXXXXXEEPVGECYDGGNGSSAN-AGKKPVWNKLANGTE 120

Query: 122 AGPVMGAVSWPALSESAKSTPKSSXDSLKSLGDGSTGAQGTGTPSSSSNKEGNNDVRPNP 181
           AGPVMGAVSWPALSESAK TPKSS DS+KSLGDGS GAQG G            DV PNP
Sbjct: 121 AGPVMGAVSWPALSESAKGTPKSSSDSIKSLGDGSAGAQGIGXXXXXXXXXXXXDVSPNP 180

Query: 182 DSSLTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTF-ASP 241
           DS+LTHPITSRQKSMRR+GS +SYNS L QQSA SSP+IDPAPN+SS+DQT+R+ F +S 
Sbjct: 181 DSTLTHPITSRQKSMRRNGSNSSYNSALSQQSAHSSPVIDPAPNSSSRDQTQRTAFISSQ 240

Query: 242 SHNDHGHQQPRYSFRSRGG-SHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFNAQPHRVV 301
           SHNDHGHQQPR SFRSRGG SHPRGDNSHHHNY SRRDHDRGNQDWNSNRNFNAQPHRVV
Sbjct: 241 SHNDHGHQQPRSSFRSRGGASHPRGDNSHHHNYSSRRDHDRGNQDWNSNRNFNAQPHRVV 300

Query: 302 HRFIRPSPXXXXXXXAFISAPPMRPIGGPLSFPDFASP-----PMVYVGPPPPEALRGVP 361
           HRFIR   XXXXXXX FIS+P MRPIGGPL FPDF  P                ALRGVP
Sbjct: 301 HRFIRXXXXXXXXXXXFISSPTMRPIGGPLPFPDFVPPVXXXXXXXXXXXXXXXALRGVP 360

Query: 362 YVTSIPPNAMFFH-PDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASF 421
           +V  IPPNAMFFH PDP LYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASF
Sbjct: 361 FVAPIPPNAMFFHGPDPHLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASF 420

Query: 422 NKVKRLTESIPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQ 481
           NKVKRLTESIPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQ
Sbjct: 421 NKVKRLTESIPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQ 480

Query: 482 DMLAAGVQTIALENINHRVSEGGQGAVHVEAHQSSRPSGNLSTHAQPYGDNGTDQVNTKA 541
           DMLAAGVQTIALENINHRVSEGGQGAVHVEAHQSSRPSGN+S HAQPYGDNGTDQVNTKA
Sbjct: 481 DMLAAGVQTIALENINHRVSEGGQGAVHVEAHQSSRPSGNMSMHAQPYGDNGTDQVNTKA 540

[Close]

BLAST of Carg07939 vs. TAIR10
Match: AT4G35890.1 (winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 129.4 bits (324), Expect = 6.6e-30
Identity = 172/542 (31.73%), Postives = 251/542 (46.31%), Query Frame = 0


Query: 10  ADSAAASSVNQSPRNSGQNYGSXXXXXXXXXXXXXXXXSSPWTQIVRGEMDMAAAVSSSA 69
           A S   +S + SPR    N+GS  XXXXXXXXXXXXXX          E +  AA ++ A
Sbjct: 4   ATSNNPASSSMSPRRISGNHGSPTXXXXXXXXXXXXXXXXXXXXXXXXESEPIAAAAAVA 63

Query: 70  SPTT-----VIEPISXXXXXXXXXPL--SESLDGGNGSSA----NVAGKKPAWNKLSNG- 129
            P++      IEPI+          +   E+  G   S A    + AGKKP W + SNG 
Sbjct: 64  GPSSPQSRAPIEPIASVSVAAPTAAVLTVEAAAGDEKSEASGGQDNAGKKPVWKRPSNGA 123

Query: 130 TEAGPVMGAVSWPALSESAKS-TPKSSXDSLKSLGD-GSTGAQGTGTPSSS--SNKEGNN 189
           +E GPVMGA SWPALSE+ K+ + KSS DSLKSLGD  S+       P +   +N     
Sbjct: 124 SEVGPVMGASSWPALSETTKAPSNKSSSDSLKSLGDVPSSXXXXXXXPVTQGIANXXXXX 183

Query: 190 DVRPNPDSSLTHPITSRQKSMR-RSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTER 249
                          SRQ+S + R+G+  S N  + Q SA  S    P+ N S + Q ++
Sbjct: 184 XXXXXXXXXXXXXXHSRQRSFKQRNGASGSANGTVSQPSAQGSFTELPSHNPSPRGQNQK 243

Query: 250 STFASPSHNDHGHQQPRYSFRSRGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNF--- 309
           + FAS +H    +   R S+R+                            W   R+F   
Sbjct: 244 NGFASQNHGGTENPSQRDSYRN-------XXXXXXXXXXXXXXXXXXXXXWTFQRSFNGR 303

Query: 310 --NAQPHRVVHRFIRPSPXXXXXXXAFISAPPMRPIGGPLSFPDFASPPMVYVGPPPPEA 369
             NAQ  R    F+R              +P ++PI   ++                   
Sbjct: 304 EGNAQSQRGTPAFVRH------------PSPTVQPIPQFMAAXXXXXXXXXXXXXXXXXX 363

Query: 370 LRGVPYVTSIPPNAMFF--HPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPI 429
              +PY+T IP    FF  + DP L+  +  QI+YYFS +NLI D +LR  MN EG+VP+
Sbjct: 364 XPRMPYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVPL 423

Query: 430 RLIASFNKVKRLTESIPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLS 489
           R++A F KV  LT++I  I++ALQ+S  VEV+G+ +R+R+++  W++R    P  +GP S
Sbjct: 424 RVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKRDNWQNWVLRRN--PTGSGPQS 483

Query: 490 PGSSNQDMLAAGVQTIALENINHRVSEGGQGAVH-----VEAHQSSRPSGNLSTHAQPYG 523
                 D +A  +  ++++  +     G    +       +  Q S  +  +S H  P G
Sbjct: 484 --VDRADAVAKRLGNLSVDQSSADPIGGSSSQLQPTEALSDDQQQSSSTAPVSNHNAPDG 522

[Close]

BLAST of Carg07939 vs. TAIR10
Match: AT5G66100.1 (winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-24
Identity = 126/407 (30.96%), Postives = 187/407 (45.95%), Query Frame = 0


Query: 96  GGNGSSANVAGKK--PAWNKLS--NGTEAGPVMGAV-SWPALSESAKST--PKSSXDSLK 155
           G N S  + A KK  P WN  S  + ++ GPVMGA  SWPALS SA+S+     S D+ K
Sbjct: 63  GNNSSDYDNADKKPPPVWNMPSSNSSSDVGPVMGAAESWPALSLSARSSSIKSPSLDASK 122

Query: 156 SLGDGSTGAQGTGTPSSSSNKEGNNDVRPNPDSSLTHPITSRQKSMRRSGSGNSYNSGLP 215
              DG                                                       
Sbjct: 123 PFPDG-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182

Query: 216 QQSAPSSPIIDPAP-NNSSKDQTERSTFASPSHNDHGHQQPRYSFRSRGGSHPRGDNSHH 275
                     + AP N   ++ ++R   +  S N    Q+ R S      S+PRG+  HH
Sbjct: 183 XXXXXXXXXXNAAPLNTRDQNHSQRGGGSFGSGNFRNSQRNRNS-----SSYPRGEGLHH 242

Query: 276 HNYGSRR-----DHDRGNQDWNSNRNFNAQPHRVVHRFIRPS-----PXXXXXXXAFISA 335
              G+RR                  + + QP R V   IRP      P        +++A
Sbjct: 243 ---GNRRXXXXXXXXXXXXXXXXXXDMHLQPQRGV-GMIRPQMLMGPPSFPASSAQYMAA 302

Query: 336 PPMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVTSIPPNAMFFHP-DPQLYAMIVS 395
           P +   GGP+ +PD+A    V++  P P+ +     V   P   M+F   D  LY  I++
Sbjct: 303 PQLGSYGGPIIYPDYAQ--HVFMPHPSPDPM---GLVGPFPLQPMYFRNFDAILYNKILT 362

Query: 396 QIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTESIPIILDALQSSSLVEV 455
           Q+EYYFS  NL +D  LR  MN+EGWVP+R+IA+F ++  LT +I  IL+AL+SS +VE+
Sbjct: 363 QVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSSEVVEI 422

Query: 456 KGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQDMLAAGVQTIAL 484
           +GET+RRR D+D++++ P E P  +GP + G+SN   L + ++++ L
Sbjct: 423 QGETLRRRGDWDKYLL-PRE-PSRSGP-AAGASNNASLVSQIESMTL 445

[Close]

BLAST of Carg07939 vs. TAIR10
Match: AT5G21160.3 (LA RNA-binding protein)

HSP 1 Score: 79.3 bits (194), Expect = 7.9e-15
Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 374 IVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTESIPIILDALQSSSL 433
           ++ Q+EYYFS +NL  D +L   M+EEGWVP ++IA F +VK +T  +  I+ AL  S+ 
Sbjct: 282 VLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNS 341

Query: 434 VEVKGETVRRRNDYDRWI 452
           VEV+G+ +R+R+ +  WI
Sbjct: 342 VEVQGDQIRKRDKWSDWI 359

[Close]

BLAST of Carg07939 vs. TAIR10
Match: AT5G46250.1 (RNA-binding protein)

HSP 1 Score: 63.5 bits (153), Expect = 4.5e-10
Identity = 36/100 (36.00%), Postives = 58/100 (58.00%), Query Frame = 0


Query: 366 PDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNM--NEEGWVPIRLIASFNKVKRLTESIPI 425
           P  +L   I+ Q+EYYFS +NL  D FL   M  N++G+VPI  IA+F+K+K+LT    +
Sbjct: 99  PIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHAL 158

Query: 426 ILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGP 464
           I+ AL+ SS + V  +        ++ + R   +P++  P
Sbjct: 159 IVSALKESSFLVVSAD--------EKKVKRLSPLPEIRDP 190

[Close]

BLAST of Carg07939 vs. TAIR10
Match: AT3G19090.1 (RNA-binding protein)

HSP 1 Score: 49.3 bits (116), Expect = 8.7e-06
Identity = 28/78 (35.90%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 374 IVSQIEYYFSGQNLIKDTFLRKNMNE--EGWVPIRLIASFNKVKRLTESIPIILDALQSS 433
           IV Q+EY F+  +L+ +  + K++++  EG+VP+  IAS  K+K LT +  ++  AL+SS
Sbjct: 148 IVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKIKALTSNHHLVSLALRSS 207

Query: 434 S--LVEVKGETVRRRNDY 448
           S  +V   G+ V+R + +
Sbjct: 208 SKLVVSEDGKKVKRTSQF 225

[Close]

BLAST of Carg07939 vs. Swiss-Prot
Match: sp|Q94K80|LRP1C_ARATH (La-related protein 1C OS=Arabidopsis thaliana OX=3702 GN=LARP1C PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.2e-28
Identity = 172/542 (31.73%), Postives = 251/542 (46.31%), Query Frame = 0


Query: 10  ADSAAASSVNQSPRNSGQNYGSXXXXXXXXXXXXXXXXSSPWTQIVRGEMDMAAAVSSSA 69
           A S   +S + SPR    N+GS  XXXXXXXXXXXXXX          E +  AA ++ A
Sbjct: 4   ATSNNPASSSMSPRRISGNHGSPTXXXXXXXXXXXXXXXXXXXXXXXXESEPIAAAAAVA 63

Query: 70  SPTT-----VIEPISXXXXXXXXXPL--SESLDGGNGSSA----NVAGKKPAWNKLSNG- 129
            P++      IEPI+          +   E+  G   S A    + AGKKP W + SNG 
Sbjct: 64  GPSSPQSRAPIEPIASVSVAAPTAAVLTVEAAAGDEKSEASGGQDNAGKKPVWKRPSNGA 123

Query: 130 TEAGPVMGAVSWPALSESAKS-TPKSSXDSLKSLGD-GSTGAQGTGTPSSS--SNKEGNN 189
           +E GPVMGA SWPALSE+ K+ + KSS DSLKSLGD  S+       P +   +N     
Sbjct: 124 SEVGPVMGASSWPALSETTKAPSNKSSSDSLKSLGDVPSSXXXXXXXPVTQGIANXXXXX 183

Query: 190 DVRPNPDSSLTHPITSRQKSMR-RSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTER 249
                          SRQ+S + R+G+  S N  + Q SA  S    P+ N S + Q ++
Sbjct: 184 XXXXXXXXXXXXXXHSRQRSFKQRNGASGSANGTVSQPSAQGSFTELPSHNPSPRGQNQK 243

Query: 250 STFASPSHNDHGHQQPRYSFRSRGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNF--- 309
           + FAS +H    +   R S+R+                            W   R+F   
Sbjct: 244 NGFASQNHGGTENPSQRDSYRN-------XXXXXXXXXXXXXXXXXXXXXWTFQRSFNGR 303

Query: 310 --NAQPHRVVHRFIRPSPXXXXXXXAFISAPPMRPIGGPLSFPDFASPPMVYVGPPPPEA 369
             NAQ  R    F+R              +P ++PI   ++                   
Sbjct: 304 EGNAQSQRGTPAFVRH------------PSPTVQPIPQFMAAXXXXXXXXXXXXXXXXXX 363

Query: 370 LRGVPYVTSIPPNAMFF--HPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPI 429
              +PY+T IP    FF  + DP L+  +  QI+YYFS +NLI D +LR  MN EG+VP+
Sbjct: 364 XPRMPYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVPL 423

Query: 430 RLIASFNKVKRLTESIPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAGPLS 489
           R++A F KV  LT++I  I++ALQ+S  VEV+G+ +R+R+++  W++R    P  +GP S
Sbjct: 424 RVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKRDNWQNWVLRRN--PTGSGPQS 483

Query: 490 PGSSNQDMLAAGVQTIALENINHRVSEGGQGAVH-----VEAHQSSRPSGNLSTHAQPYG 523
                 D +A  +  ++++  +     G    +       +  Q S  +  +S H  P G
Sbjct: 484 --VDRADAVAKRLGNLSVDQSSADPIGGSSSQLQPTEALSDDQQQSSSTAPVSNHNAPDG 522

[Close]

BLAST of Carg07939 vs. Swiss-Prot
Match: sp|Q8RWR2|LRP1B_ARATH (La-related protein 1B OS=Arabidopsis thaliana OX=3702 GN=LARP1B PE=1 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 2.6e-23
Identity = 126/407 (30.96%), Postives = 187/407 (45.95%), Query Frame = 0


Query: 96  GGNGSSANVAGKK--PAWNKLS--NGTEAGPVMGAV-SWPALSESAKST--PKSSXDSLK 155
           G N S  + A KK  P WN  S  + ++ GPVMGA  SWPALS SA+S+     S D+ K
Sbjct: 62  GNNSSDYDNADKKPPPVWNMPSSNSSSDVGPVMGAAESWPALSLSARSSSIKSPSLDASK 121

Query: 156 SLGDGSTGAQGTGTPSSSSNKEGNNDVRPNPDSSLTHPITSRQKSMRRSGSGNSYNSGLP 215
              DG                                                       
Sbjct: 122 PFPDG-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181

Query: 216 QQSAPSSPIIDPAP-NNSSKDQTERSTFASPSHNDHGHQQPRYSFRSRGGSHPRGDNSHH 275
                     + AP N   ++ ++R   +  S N    Q+ R S      S+PRG+  HH
Sbjct: 182 XXXXXXXXXXNAAPLNTRDQNHSQRGGGSFGSGNFRNSQRNRNS-----SSYPRGEGLHH 241

Query: 276 HNYGSRR-----DHDRGNQDWNSNRNFNAQPHRVVHRFIRPS-----PXXXXXXXAFISA 335
              G+RR                  + + QP R V   IRP      P        +++A
Sbjct: 242 ---GNRRXXXXXXXXXXXXXXXXXXDMHLQPQRGV-GMIRPQMLMGPPSFPASSAQYMAA 301

Query: 336 PPMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVTSIPPNAMFFHP-DPQLYAMIVS 395
           P +   GGP+ +PD+A    V++  P P+ +     V   P   M+F   D  LY  I++
Sbjct: 302 PQLGSYGGPIIYPDYAQ--HVFMPHPSPDPM---GLVGPFPLQPMYFRNFDAILYNKILT 361

Query: 396 QIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTESIPIILDALQSSSLVEV 455
           Q+EYYFS  NL +D  LR  MN+EGWVP+R+IA+F ++  LT +I  IL+AL+SS +VE+
Sbjct: 362 QVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSSEVVEI 421

Query: 456 KGETVRRRNDYDRWIIRPGEIPDVAGPLSPGSSNQDMLAAGVQTIAL 484
           +GET+RRR D+D++++ P E P  +GP + G+SN   L + ++++ L
Sbjct: 422 QGETLRRRGDWDKYLL-PRE-PSRSGP-AAGASNNASLVSQIESMTL 444

[Close]

BLAST of Carg07939 vs. Swiss-Prot
Match: sp|Q6PKG0|LARP1_HUMAN (La-related protein 1 OS=Homo sapiens OX=9606 GN=LARP1 PE=1 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 2.6e-15
Identity = 46/115 (40.00%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 341 GPPPPEALRGVPYVTSIPPNAMFFHPDPQLYA-MIVSQIEYYFSGQNLIKDTFLRKNMNE 400
           GP  P+ +  + Y      +   +  D +L    I  QIEYYFS  NL +D FLR+ M+ 
Sbjct: 373 GPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDA 432

Query: 401 EGWVPIRLIASFNKVKRLTESIPIILDALQSSSLVEVKGETVRRRNDYDRWIIRP 455
           +G++PI LIASF++V+ LT  I +I  AL+ S +VE+  E VRRR + ++W + P
Sbjct: 433 DGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRREEPEKWPLPP 487

[Close]

BLAST of Carg07939 vs. Swiss-Prot
Match: sp|Q659C4|LAR1B_HUMAN (La-related protein 1B OS=Homo sapiens OX=9606 GN=LARP1B PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 3.7e-14
Identity = 47/123 (38.21%), Postives = 76/123 (61.79%), Query Frame = 0


Query: 352 PYVTSIPPNAMFFHPD---PQLYAM--------IVSQIEYYFSGQNLIKDTFLRKNMNEE 411
           P+ T +  + M+++ D    Q+Y +        I  QIEYYFS +NL +D FLR  M+E+
Sbjct: 186 PFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQ 245

Query: 412 GWVPIRLIASFNKVKRLTESIPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDV 464
           G++PI LIA F +V+ LT ++ +IL+AL+ S+ VE+  E +R++ + ++W I PG  P  
Sbjct: 246 GFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKWPI-PGPPPRS 305

[Close]

BLAST of Carg07939 vs. Swiss-Prot
Match: sp|Q6ZQ58|LARP1_MOUSE (La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 3.7e-14
Identity = 42/98 (42.86%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 353 YVTSIPPNAMFFHPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFN 412
           Y  ++  N ++      L   I  QIEYYFS  NL +D FLR+ M+ +G++PI LIASF+
Sbjct: 361 YFDNVSSNEIYSMDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFH 420

Query: 413 KVKRLTESIPIILDALQSSSLVEVKGETVRRRNDYDRW 451
           +V+ LT  I +I  AL+ S +VE+  E VRRR + ++W
Sbjct: 421 RVQALTTDISLIFAALKDSKVVEMVEEKVRRREEPEKW 458

[Close]

BLAST of Carg07939 vs. TrEMBL
Match: tr|A0A1S3B2V3|A0A1S3B2V3_CUCME (la-related protein 1C OS=Cucumis melo OX=3656 GN=LOC103485155 PE=4 SV=1)

HSP 1 Score: 719.5 bits (1856), Expect = 5.5e-204
Identity = 420/550 (76.36%), Postives = 464/550 (84.36%), Query Frame = 0


Query: 2   MAASNLPVADSAAASSVNQSPRNS---GQNYGSXXXXXXXXXXXXXXXXSSPWTQIVRGE 61
           MAASNLP ADS  AS  + SPRNS         XXXXXXXXXXXXXXXX  PWT+IVRGE
Sbjct: 1   MAASNLPDADSVTASIADHSPRNSXXXXXXXXXXXXXXXXXXXXXXXXXXXPWTRIVRGE 60

Query: 62  MDMAAAVSSSASPTTVIEPISXXXXXXXXXPLSESLDGGNGSSANVAGKKPAWNKLSNGT 121
           +D+AA VSSSASPT V+EP+S         P+ ES DGGNGS+AN AGKKPAWNKL+NGT
Sbjct: 61  IDVAAVVSSSASPTAVVEPVS--FFSSSEEPVGESYDGGNGSTAN-AGKKPAWNKLANGT 120

Query: 122 EAGPVMGAVSWPALSESAKSTPKSSXDSLKSLGDGSTGAQGTGTPSSS-SNKEGNNDVRP 181
           EAGPVMGAVSWPALSESAK+TPKSS DSLKSLGDGSTGAQGTGT SS+ SNKEGNNDV P
Sbjct: 121 EAGPVMGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVSP 180

Query: 182 NPDSSLTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTF-A 241
           NPDS+L HPITSRQKSMRR+GS NSYNS LPQQSAPSSP+ID APNNSSKDQT+R+TF +
Sbjct: 181 NPDSTLAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDQTQRTTFVS 240

Query: 242 SPSHNDHGHQQPRYSFRSR-GGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFNAQPHR 301
           S SHNDHGHQQPR SFRSR GGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN+NAQPHR
Sbjct: 241 SQSHNDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHR 300

Query: 302 VVHRFIRPSPXXXXXXXAFISAPPMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVT 361
           VVHRFIRPSPXXXX    +IS+P MR IGGPL FPDFA PP+VY+GPPPPEALRGVP+V 
Sbjct: 301 VVHRFIRPSPXXXXNTTGYISSPTMRAIGGPLPFPDFA-PPVVYIGPPPPEALRGVPFVA 360

Query: 362 SIPPNAMFFH-PDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKV 421
            I PNAMFFH PDPQLYAMIVSQIEYYFSG+NLIKDTFLR+NMNEEGWVP++LIASF+KV
Sbjct: 361 PISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKV 420

Query: 422 KRLTESIPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPGEIPDVAG---PLSPGSSNQ 481
           +RLTE+I  ILDALQSS++VEVKG+TVRRR+DYDRWIIRPG++P+++G   PLSPGSSNQ
Sbjct: 421 QRLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSNQ 480

Query: 482 DMLAAGVQTIALENINHRVSEGGQGAVHVEAHQSSRPSGNLSTHAQPYGDNGTDQVNTKA 541
           DMLA GVQ IALEN+NH+VSEGGQG VHV+                 +GD+     NTKA
Sbjct: 481 DMLAGGVQGIALENVNHKVSEGGQGEVHVD--------------EASHGDS-----NTKA 527

[Close]

BLAST of Carg07939 vs. TrEMBL
Match: tr|A0A0A0KJG2|A0A0A0KJG2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507180 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 4.0e-138
Identity = 270/353 (76.49%), Postives = 302/353 (85.55%), Query Frame = 0


Query: 194 MRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSSKDQTERSTF-ASPSHNDHGHQQPRYSF 253
           MRR+GS NSYNS LPQQSAPSSP+ID APNNS KDQT+R+TF +S SH+DHGHQQPR S+
Sbjct: 1   MRRNGSSNSYNSSLPQQSAPSSPVIDTAPNNSPKDQTQRTTFVSSQSHSDHGHQQPRNSY 60

Query: 254 RSR-GGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNFNAQPHRVVHRFIRPSPXXXXXX 313
           RSR GGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN+NAQPHRVVHRFIRPSPXXXX  
Sbjct: 61  RSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRFIRPSPXXXXNT 120

Query: 314 XAFISAPPMRPIGGPLSFPDFASPPMVYVGPPPPEALRGVPYVTSIPPNAMFFH-PDPQL 373
             +IS+P MR IGGPL FPDFA PP+VY+GPPPPEALRGVP+V  I PNAMFFH PDPQL
Sbjct: 121 TGYISSPTMRAIGGPLPFPDFA-PPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQL 180

Query: 374 YAMIVSQIEYYFSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTESIPIILDALQS 433
           YAMIVSQIEYYFSG+NLIKDTFLR+NMNEEGWVP++LIASF+KV+RLTE+I  ILDALQS
Sbjct: 181 YAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTENIQTILDALQS 240

Query: 434 SSLVEVKGETVRRRNDYDRWIIRPGEIPDVAG---PLSPGSSNQDMLAAGVQTIALENIN 493
           S++VEVKG+TVRRR+DYDRWIIRPG++P+++G   PLSPGSS QDMLAAGV+ IALENIN
Sbjct: 241 STVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSKQDMLAAGVKGIALENIN 300

Query: 494 HRVSEGGQGAVHVEAHQSSRPSGNLSTHAQPYGDNGTDQVNTKAGSYHSSSER 541
           HRVSEGGQG VHV+                 +GDN     NTKAGS HSSSER
Sbjct: 301 HRVSEGGQGDVHVD--------------EASHGDN-----NTKAGSEHSSSER 333

[Close]

BLAST of Carg07939 vs. TrEMBL
Match: tr|A0A2C9WD76|A0A2C9WD76_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G109100 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 2.1e-91
Identity = 266/555 (47.93%), Postives = 348/555 (62.70%), Query Frame = 0


Query: 2   MAASNLPVADSAAASSVNQSPRNSG-----QNYGSXXXXXXXXXXXXXXXXSSPWTQIVR 61
           MA +   ++ S  ++  N SPR+       +N+ S XXXXXXXXXXXXX  SSPWTQIVR
Sbjct: 1   MATTANALSSSITSTPTNSSPRHPAPVAAVENHNS-XXXXXXXXXXXXXVVSSPWTQIVR 60

Query: 62  GEMD----MAAAVSSSASPTTVIEPISXXXXXXXXXPLSES--LDGGNGSSANVAGKKPA 121
           GE +     A  + S+  P  V +         XXX ++E   LD GNGS  N AGK+P 
Sbjct: 61  GESETITVAATHLPSTREPMVVSDQPVLVAVSSXXXXVAEEEILDNGNGSKNN-AGKRPV 120

Query: 122 WNKLSNG-TEAGPVMGAVSWPALSESAKSTPKSSXDSLKSLGDGSTGA---QGTGTPSSS 181
           WNK SNG TE GPVMGAVSWPALSESA+++ K++ D  K L D S+     QGTG+ SSS
Sbjct: 121 WNKPSNGATEVGPVMGAVSWPALSESARASGKTTQDLSKGLSDVSSSVPVPQGTGSASSS 180

Query: 182 SNKEGNNDVRPNPDSSLTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSSPIIDPAPNNSS 241
             +  NN     P       + +RQ+  +R+G+  S N G PQ       + D   NNSS
Sbjct: 181 HKQVINN---ATPXXXXXXXMQARQRPTKRNGANTSSNGGTPQSPGSQPHVGDVHLNNSS 240

Query: 242 -KDQTERSTFASPSHNDHGHQQPRYSFRSRGGSHPRGDNSHHHNYGSRRDHDRGNQDWNS 301
            +D ++R++  S S NDH  QQ    FR  GG H RGD SHHHNYG RR+ DR NQDWN 
Sbjct: 241 PRDHSQRNS-QSRSANDH-LQQXXXXFRXNGGPHSRGDGSHHHNYGGRREQDRANQDWNP 300

Query: 302 NRNFNA-----QPHRVVHRFIRPSPXXXXXXXAF-ISAPPMRPIGGPLSFPDFASPPMVY 361
           +RNFN      Q  RVV RF+R   XXXXXXX      PP+R  G P+ FP+F      Y
Sbjct: 301 HRNFNGRDTHMQSQRVVQRFLRXXXXXXXXXXXXPFIGPPVRAFGSPIGFPEF-----YY 360

Query: 362 VGPPPPEALRGVPYVTS-IPPNAMFF-HPDPQLYAMIVSQIEYYFSGQNLIKDTFLRKNM 421
           V  PPP+ LRG+P+V + IPP AM+F  PDPQL++ IV+QI+YYFS +NLIKDTFLR+NM
Sbjct: 361 VAGPPPDPLRGMPFVAAPIPPPAMYFTAPDPQLHSKIVNQIDYYFSNENLIKDTFLRQNM 420

Query: 422 NEEGWVPIRLIASFNKVKRLTESIPIILDALQSSSLVEVKGETVRRRNDYDRWIIRPG-E 481
           +++GWVPI+LIA FNKV  LT++I  ILDA++SS++VEV+G+ VRRRND+ RWI+ P  +
Sbjct: 421 DDQGWVPIKLIAGFNKVSHLTDNIQFILDAIRSSTVVEVQGDKVRRRNDWMRWIMPPSVQ 480

Query: 482 IPDVAGPLSPGSSNQDMLAAGVQTIALENINHRVSEGGQGA-VHVEAHQSSRPSGNLSTH 531
            P ++ P S G S+ ++LAA +Q+I+LE+     S G   A VH E       SG+L++ 
Sbjct: 481 FPSISSPSSLGRSSHEILAANIQSISLEDNTASHSSGRSPADVHSETFLGRSSSGDLNSQ 540

[Close]

BLAST of Carg07939 vs. TrEMBL
Match: tr|A0A1S3B1N1|A0A1S3B1N1_CUCME (la-related protein 1C-like OS=Cucumis melo OX=3656 GN=LOC103485156 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 3.2e-87
Identity = 266/572 (46.50%), Postives = 322/572 (56.29%), Query Frame = 0


Query: 2   MAASNLPVADSAAASSVNQSPRNSGQNYGSXXXXXXXXXXXXXXXXSSPWTQIVRGEMDM 61
           MAA+NL   + A A+ V+ S R+SGQN  S                SSPWTQIVRGE+++
Sbjct: 1   MAATNLSDNNPAMATGVHHS-RHSGQNISS------PKSRRSPRPVSSPWTQIVRGELEI 60

Query: 62  AAAVSSSASPTT----VIEP------ISXXXXXXXXXPLSESLDGGNGSSANVAGKKPAW 121
            A V SS S  T    ++EP        XXXXXXXXX              + AG KPAW
Sbjct: 61  PAVVPSSPSNVTSSAAIVEPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSNAGNKPAW 120

Query: 122 NKLSNG-TEAGPVMGAVSWPALSESAKSTPKSSXDSLKSLGDGSTG--AQGTGTPSSSSN 181
           NKLSNG  E GPVMGAVSWPALSES + T KSS DS K   DGS G   +GTG P SS  
Sbjct: 121 NKLSNGAVEVGPVMGAVSWPALSESTRFTNKSSSDSPKDSADGSAGPACEGTGNPPSSPY 180

Query: 182 KEG-------------NNDVRPNPDSSLTHPITSRQKSMRRSGSGNSYNSGLPQQSAPSS 241
           K+G                                QKSM+RSG+ +SY+ G+ QQSA S 
Sbjct: 181 KKGISASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKSMKRSGAASSYSGGVSQQSATSV 240

Query: 242 PIIDPAPNN-SSKDQTERSTFASPS--HNDHGHQQPRYSFRSRGGSHPRGDNSHHHNYGS 301
             ID  P+N SSKD  +R++FAS S                                   
Sbjct: 241 STIDTTPSNPSSKDHMQRNSFASQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 302 RRDHDRGNQDWNSNRNFNAQPHRVVHRFIRPSPXXXXXXXAFISAPPMRPIGGPLSFPDF 361
            RD DRGN DWN +RN+  QP RVV R+IRP P       A      MRP+GGP+ F +F
Sbjct: 301 XRDQDRGNHDWNPHRNY-GQPQRVVQRYIRPPP---PPSNATFIPSSMRPLGGPIPFHEF 360

Query: 362 ASPPMVYVGPPPPEALRGVPYVTSIPPNAMFF-HPDPQLYAMIVSQIEYYFSGQNLIKDT 421
             PP+VYV  PP EALR VP+V  +PPNA+FF   DPQLYA IV QIEYYFS +NL+KDT
Sbjct: 361 V-PPVVYVAAPPQEALRSVPFVAPMPPNAVFFPASDPQLYARIVHQIEYYFSDENLVKDT 420

Query: 422 FLRKNMNEEGWVPIRLIASFNKVKRLTESIPIILDALQS-SSLVEVKGETVRRRNDYDRW 481
           +LR+NM+E+GWVPI L+A F  V+ LT++IP+ILDAL+S S++VEV+G+ VRRRNDY +W
Sbjct: 421 YLRRNMDEDGWVPIHLVAGFKMVRSLTDNIPVILDALRSTSTVVEVQGDKVRRRNDYSKW 480

Query: 482 IIRPG--EIPDVAGPLSPGSSNQDMLAAGVQTIALENINHRVSEGGQGAVHVEAHQSSRP 541
           I+ P      DVA PLSP +S+QD+LAAGVQ I LE  N   S   +G   VEA QS  P
Sbjct: 481 IMLPSTPTSNDVA-PLSPANSSQDLLAAGVQNITLETYN---STDVRGDFKVEALQSRSP 540

[Close]

BLAST of Carg07939 vs. TrEMBL
Match: tr|E0CU57|E0CU57_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0349g00060 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 7.9e-86
Identity = 246/582 (42.27%), Postives = 334/582 (57.39%), Query Frame = 0


Query: 7   LPVADSAAASSVNQSPRNSGQNYGSXXXXXXXXXXXXXXXXSSPWTQIVRGEMDMAAA-- 66
           +  A+S+A +  + SPR S   + S                +SPWTQ+VRGE +   A  
Sbjct: 1   MATANSSAPTGPHLSPRYSPDGHSS----PKSRRSAARGAVTSPWTQVVRGESESITAAP 60

Query: 67  -----------VSSSASPT--TVIEPISXXXXXXXXXPLSESLDGGNGSSANVAGKKPAW 126
                      VSS  SPT  T   P S          L ES D GNG+    AGK+PAW
Sbjct: 61  SSPVSSQEQIVVSSDCSPTKATSDSPASPEDSSQVEAQL-ESSDNGNGN----AGKRPAW 120

Query: 127 NKLSNG-TEAGPVMGAVSWPALSESAKSTPKSSXDSLKSLGDGSTG-------AQGTGTP 186
           NK SNG  E GPVMGA SWPALSESA+++ KS+ DSLKS  DGS          QG+G  
Sbjct: 121 NKPSNGVAEVGPVMGASSWPALSESARASAKSASDSLKSPTDGSISTPPAQVHVQGSGNA 180

Query: 187 SSSSNKEGNNDVRPNPDSSLTHPITSRQKSMR---RSGSGNSYNSGLPQQSAPSSPIIDP 246
           SS S+K+ NN+  P P S+ +H + +RQKSM+   RSG  +S N+GLPQ +AP  P+++ 
Sbjct: 181 SSPSHKQVNNN--PIPSSTPSHALPTRQKSMKRGDRSGGSSSANAGLPQPAAPQGPVMEV 240

Query: 247 APNNSS-KDQTERST---------FASPSH--NDHGHQQPRYSFRSRGGSHPRGDNSHHH 306
            PNNSS +D T RS          F   SH  ND+ HQ+  Y                  
Sbjct: 241 PPNNSSPRDHTNRSIHPEGGQRGGFVPQSHSGNDYPHQRGSYR-XXXXXXXXXXXXXXXX 300

Query: 307 NYGSRRDHDRGNQDWNSNRNFNAQPH---RVVHR-FIRPSPXXXXXXXAFISAPPMRPIG 366
            YG RRD DR N DWN +RNFN +PH   RVV R FIRP          FI+ P +RP G
Sbjct: 301 GYGGRRDQDRVNHDWNPHRNFNREPHMQPRVVARGFIRP---PSHSSAQFIAPPHLRPFG 360

Query: 367 GPLSFPDFASP--PMVYVGPPPPEALRGVPYVTSIPPNAMFFHP-DPQLYAMIVSQIEYY 426
            P+ + + ASP   +VYV  P  + LR VP+V  + P+ MFF P D QL+A +V+QI+YY
Sbjct: 361 NPILYQELASPVSQVVYVPAPHADPLRTVPFVAPM-PHPMFFPPQDHQLHAKLVAQIDYY 420

Query: 427 FSGQNLIKDTFLRKNMNEEGWVPIRLIASFNKVKRLTESIPIILDALQSSSLVEVKGETV 486
           FS +NLIKD +LR+NM+E+GWVP++LIA F KVK LTE+I +IL+A+++S++VEV+G+ +
Sbjct: 421 FSNENLIKDIYLRQNMDEQGWVPVKLIAGFKKVKLLTENIQLILEAVRTSTVVEVQGDKL 480

Query: 487 RRRNDYDRWIIRPG-EIPDVAGPLSPGSSNQDMLAAGVQTIAL-ENINHRVSEGGQGAVH 542
           R+R D+ +WI+ P  +   ++ P S GSS+ D LAA  Q + L E   +  +   +  VH
Sbjct: 481 RKRGDWMKWIMPPSVQFSPLSSPQSIGSSSYDTLAARFQNVTLGEQTTNYSTVRSEADVH 540

The following BLAST results are available for this feature:

BLAST of Carg07939 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023517528.1	3.8e-257	92.42	la-related protein 1C-like [Cucurbita pepo subsp. pepo]	[more]
XP_022926424.1	6.7e-246	91.13	la-related protein 1C-like [Cucurbita moschata]	[more]
XP_023003871.1	2.4e-243	89.46	la-related protein 1C-like [Cucurbita maxima]	[more]
XP_008440860.1	8.3e-204	76.36	PREDICTED: la-related protein 1C [Cucumis melo]	[more]
XP_023522714.1	1.1e-200	78.55	la-related protein 1C-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg07939 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35890.1	6.6e-30	31.73	winged-helix DNA-binding transcription factor family protein	[more]
AT5G66100.1	1.4e-24	30.96	winged-helix DNA-binding transcription factor family protein	[more]
AT5G21160.3	7.9e-15	44.87	LA RNA-binding protein	[more]
AT5G46250.1	4.5e-10	36.00	RNA-binding protein	[more]
AT3G19090.1	8.7e-06	35.90	RNA-binding protein	[more]

BLAST of Carg07939 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94K80\|LRP1C_ARATH	1.2e-28	31.73	La-related protein 1C OS=Arabidopsis thaliana OX=3702 GN=LARP1C PE=1 SV=1	[more]
sp\|Q8RWR2\|LRP1B_ARATH	2.6e-23	30.96	La-related protein 1B OS=Arabidopsis thaliana OX=3702 GN=LARP1B PE=1 SV=2	[more]
sp\|Q6PKG0\|LARP1_HUMAN	2.6e-15	40.00	La-related protein 1 OS=Homo sapiens OX=9606 GN=LARP1 PE=1 SV=2	[more]
sp\|Q659C4\|LAR1B_HUMAN	3.7e-14	38.21	La-related protein 1B OS=Homo sapiens OX=9606 GN=LARP1B PE=1 SV=2	[more]
sp\|Q6ZQ58\|LARP1_MOUSE	3.7e-14	42.86	La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=3	[more]

BLAST of Carg07939 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B2V3\|A0A1S3B2V3_CUCME	5.5e-204	76.36	la-related protein 1C OS=Cucumis melo OX=3656 GN=LOC103485155 PE=4 SV=1	[more]
tr\|A0A0A0KJG2\|A0A0A0KJG2_CUCSA	4.0e-138	76.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507180 PE=4 SV=1	[more]
tr\|A0A2C9WD76\|A0A2C9WD76_MANES	2.1e-91	47.93	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G109100 PE=4 SV=...	[more]
tr\|A0A1S3B1N1\|A0A1S3B1N1_CUCME	3.2e-87	46.50	la-related protein 1C-like OS=Cucumis melo OX=3656 GN=LOC103485156 PE=4 SV=1	[more]
tr\|E0CU57\|E0CU57_VITVI	7.9e-86	42.27	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0349g00060 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036390	WH_DNA-bd_sf
IPR036388	WH-like_DNA-bd_sf
IPR006630	La_HTH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07939-RA	Carg07939-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 368..444 e-value: 6.2E-26 score: 102.2
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 374..429 e-value: 1.3E-21 score: 76.2
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 364..453 score: 25.676
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	G3DSA:1.10.10.10		coord: 363..454 e-value: 6.0E-30 score: 104.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 496..541
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 502..535
None	No IPR available	PANTHER	PTHR22792:SF76	LA-RELATED PROTEIN 1	coord: 112..495
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 112..495
None	No IPR available	CDD	cd07323	LAM	coord: 371..443 e-value: 6.77234E-30 score: 111.084
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	SSF46785	"Winged helix" DNA-binding domain	coord: 362..453

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07939	Cla014311	Watermelon (97103) v1	carwmB0642
Carg07939	Csa6G507180	Cucumber (Chinese Long) v2	carcuB0663
Carg07939	MELO3C007932	Melon (DHL92) v3.5.1	carmeB0643
Carg07939	ClCG01G020520	Watermelon (Charleston Gray)	carwcgB0623
Carg07939	CSPI06G32050	Wild cucumber (PI 183967)	carcpiB0672
Carg07939	Cucsa.043850	Cucumber (Gy14) v1	carcgyB0714
Carg07939	Cucsa.322820	Cucumber (Gy14) v1	carcgyB0718
Carg07939	CmaCh07G004100	Cucurbita maxima (Rimu)	carcmaB0914
Carg07939	CmaCh03G006620	Cucurbita maxima (Rimu)	carcmaB0912
Carg07939	CmaCh01G019850	Cucurbita maxima (Rimu)	carcmaB0909
Carg07939	CmoCh07G004050	Cucurbita moschata (Rifu)	carcmoB0888
Carg07939	CmoCh03G006900	Cucurbita moschata (Rifu)	carcmoB0886
Carg07939	Lsi01G005730	Bottle gourd (USVL1VR-Ls)	carlsiB585
Carg07939	Lsi04G017660	Bottle gourd (USVL1VR-Ls)	carlsiB588
Carg07939	Cp4.1LG02g08190	Cucurbita pepo (Zucchini)	carcpeB0917
Carg07939	Cp4.1LG19g08640	Cucurbita pepo (Zucchini)	carcpeB0915
Carg07939	Cp4.1LG10g00070	Cucurbita pepo (Zucchini)	carcpeB0913
Carg07939	CsGy3G000510	Cucumber (Gy14) v2	carcgybB0639
Carg07939	CsGy6G031590	Cucumber (Gy14) v2	carcgybB0640
Carg07939	MELO3C007932.2	Melon (DHL92) v3.6.1	carmedB0653
Carg07939	CsaV3_6G047400	Cucumber (Chinese Long) v3	carcucB0674
Carg07939	Cla97C01G019980	Watermelon (97103) v2	carwmbB0669
Carg07939	Cla97C10G185180	Watermelon (97103) v2	carwmbB0670
Carg07939	Bhi03G000611	Wax gourd	carwgoB0759

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07939	Carg00570	Silver-seed gourd	carcarB425

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07939	Silver-seed gourd	carcarB122
Carg07939	Silver-seed gourd	carcarB371
Carg07939	Silver-seed gourd	carcarB441
Carg07939	Wild cucumber (PI 183967)	carcpiB0671
Carg07939	Cucumber (Chinese Long) v2	carcuB0662
Carg07939	Cucumber (Chinese Long) v3	carcucB0673
Carg07939	Bottle gourd (USVL1VR-Ls)	carlsiB589
Carg07939	Melon (DHL92) v3.5.1	carmeB0641
Carg07939	Melon (DHL92) v3.6.1	carmedB0651
Carg07939	Watermelon (Charleston Gray)	carwcgB0622
Carg07939	Watermelon (97103) v1	carwmB0639