Cp4.1LG10g00070 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG10g00070
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLa-related 1B
LocationCp4.1LG10 : 3920780 .. 3927513 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCCATATGGGCCAGAGCCGTGAAAGCCCATCCTGGCGCGCGCACGCGGGGAAGCGAGGGCATTAAAGTAATTTCAGAAGTAACCATGAACTAACCCTGGCAAAGGCATCCGAAGGACAGAGAGAAACATTTTTAGAGACAGAGAAACCTTCTGTTTCTTAGTCCCTCTTCCCACTCTCCAACTGACCTACGCCTCTTTTCCTTTTCTCTCTGCGATCCGATCCTTCAAGCTTTTGGAAATCCTTCAGAGGAAGATTTTCCGACTCCTTTTGTTCATGAATTCTTGAAAGAAGGAAGTAATTTGCTTTTGATTCTGTTGCTTAATTTTGTTTCCCTTTGTCCTGTTTGCCGTCGATCAAGCTACTTTCTGCCGTCTGAAAGAAACCCTAATTACTAATTTGCGATGGCTGCTTCTACTTTACCTGATGCTGATTCGGTGACGGCATCGAGTGTCGATCATTCTTCTCGTAATTCTGGACAGAGTAATAGCAGCAGCCCCAAATCATCATCACGTCGCTCTGGTGGGCGCACAGTGTCTTCTCCGTGGAACCAGATTGTTCGCGGTGAACTAGACACCGCGGCGGCTGTTTCATCATCTGTATCTTCGACTACTGTTGTTGAACCTGTAACATTTACTTCTTCTTCTTCTGCTACGTCTGAAGAGCCAGTGGGTGAGTGTTACGATGGTGGGAATGGGTCGTCCGCCAATGCTGGAAAGAAGCCAGTGTGGAATAAACTCGCTAATGGAACTGAGGTTGGGCCTGTCATGGGGGCTGTGTCTTGGCCTGCTTTGTCGGAGTCTGCCAAGGGCACACCTAAATCATCTTCGGATTCAATTAAAAGTTTAGGTGATGGATCCGCTGGCGCGCAGGTATGTTCTTCAACTTTATGAAAAGGATACATTTAGTTTGTTTGCAGGAAAATGTTTAAACTTCTGCAATTTATCTCCATGATTAAGCTAATGTTTTCTGTTTCTCGAACAAAAAGGTGATATGTTTATGAATAGATTCAAGCAATTGTTTCCAAAATTAGTATGTATACGCAAAATAATGTTTAATTTTGAATGAACTTTATGAGTACCTTGGATACGCTGAGAAACATTAACCGGCTTGTGGTGGGATATTTTACGCCGATGCTCAAACAGGTTAAGAAATCAACAAAAAAATGTGTCGGACAGGGGATAGCTAGAGTTTTCACTACATTAGTTATTCGTTATATGTCGAATTAAGGGATATTTTACTAATTATTATTATTATTATTTTTCCTTTTGCACATAGGGGATTGGAACTTCATCATCATCATCAAACAACGAAGGTAATAATGACGTTAGTCCTAATCCTGATTCAACTCTTACTCATCCAATAACTTCGCGGCAGAAATCGATGAGGCGCAATGGTTCAAATAGTTCATATAACAGTGCCCTCTCTCAGCAGTCTGCTCATTCAAGTCCTGTAATCGACCCAGCTCCTAACAGTTCTTCAAGGGATCAGACACAGAGAACTGCATTTATATCATCACAATCACATAATGATCATGGTCATCAACAACCACGTAGTTCATTTCGGAGTCGTGGTGGTGCTTCACATCCACGTGGTGATAATTCCCATCATCATAACTATAGTTCTAGGCGTGATCACGATCGTGGAAATCAAGATTGGAATTCAAACCGAAATTTTAATGCACAACCTCATAGAGTGGTTCACAGGTTTATTAGACCACCTCCACCTCCACCTCCTAATACCACTGGCTTTATTTCTTCTCCAACAATGAGGCCTATTGGGGGTCCCCTACCCTTCCCTGGTAGGCTCTACATTTTTCTGAGGTTTCTTGGTTTTTCTCATGTGAACTTGCTTAATGCATGAATTTTTTTGTAGATTTTGTACCTCCAGTGGTGTATATTGGTCCTCCTCCTCCTCCTCCTCCCCCTCCTCCAGAGGCTCTTAGAGGTGTACCTTTTGTCGCTCCAATACCACCCAATGCAATGTTTTTTCATGGCCCAGATCCTCATTTGTACGCTATGATAGTGAGTCAGATAGAATACTACTTTAGGTATATTTGATGTGATAGCTTTCTACTTTTTCCTATGATCCTTGTCTAGTGTTAGAACTTTGAGAACATTTTAGTGGTGATTGCACCTTATATTTGTGAACTGCAGTGGTGAAAATTTAGTAAAAGACACTTTCTTGAGGCAGAAAATGGATGAAGATGGCTGGGTTCCGGTTAGACTAATAGCAACCTTCAGCAAGGTGAGTTGCTTTCACGATTTCAACAAGAATGCATAATTAATTTTTTTCTTGACGATGATGACAGGATGACCTTCATTGTCCTGTTATTTTTCTGCCTCATGCCCTGTCTTTTGCATGTTTTTCTCTGTTAATATTTTTTTGAAAAAATTGTTTTTGTAATGTTTTCTTTACTTCCCACTCTGTGCGTGCATGTGAAACTGTTTTAAAGAAAAGTCCTGCCGTTGAAACTTGTGGAATTGTTCTTGGAACTCTTTGCCTCTAGACTTATTTGATTTATTAACAATGTCAATGACATGTCTAAAAAAAAAGACAACAAAGAACCACGTACAGCGAACGATTGAAGAAAATAGCATCAGTGGAGAACTGAAATAGCTGCACAGTTAAAATATTGGTTCTGATTTGAGATACAAATTTATCTGATTAACGACATCAATTTATAGCAGCATAGTTTTGGCACCTTGAACAGGTTTTGTGTTTGATGGCACACCTTGAACAGGTTTTGTGTTTGATGGCACACCTTGAACAGGTTTTGTGTTTGATGGCACTAGGAGTTCAAAATTCTATATAGCTGTACCGTATGATTAATCAAGTATGGGTGTAACAGCCAAAGCTCATATTGTTTTCTTTTTGAGCTTTCCTTCAATGTTTTAAAATGCGTCCACTAGGGAGAGATTTCCACACCCTTAAGGAATGCTTTCTTCCCCTCTCCAACTAATGTGAGATCTCACAATCCACCCCCTTGGGGGCCCATCGTCCTTGTTGGCTAGCCCCATCTGGCTTTGATATCATTTGTAACTGTCCAAGCCCACTGCTAACACATATATTGTCNCCCATCTGGCGTTGATATCATTTGTAACTGTCCAAGCCCACTGCTAACACATATATTGTCCTCTTTGGGTTTTTCCTTAAGGTCTTCCCCTCAAGGTTTTAAAATGTGTCCACTAGGGAGAGGTTTCCACACCCTTATAAGGAATGTTTTGTTCCCCTCTCTCCAACCGATGTAGGATCTCACAATAGATGTTAATATTTTGTTGCTTCCCTATAGGTTGTTATGTCATTTTTCCGTCATTTAATAAACCATGTTTCATTATGTGCGCCACCACATTTTTTGGGTTTGTGGAATATGAGCTTTGCCAGACAGCATTGGTTAAATATGGCATGCATGTTTTATTTTTCAAGAATTTTATGTCAAGACATGTTTGGTAGGATATGAATGCAAATGTTGACATTGGGAAGTGATGAGTTTGTTAGGATCTAGGATCCCAATAACAAGAAACACAATGTAGAATTGTTATTGCTATATTGAAAGAGAAATTACAATGTCATAGCCTTTTGAGAGGGCTGTCTCTCCCAAGTCCCACTTTGTGCTATCTCCAAAATTAACCTCTCTGCATAACATCCCTAACTTCCCTATTTATAACCAAGTCTTCCTAACTAACAACCACTATGCACTTACTAATATTATACTAGTATTCTCAAGATATCACCTATCAATACTCTCATTGAGTTCTAGGTATCCCCTAATTGTACTCGTAGAGTTCTAGATGTTTGATGATATTGCATTTAAAAGTGAGTGGTGGGACATTTTTAAGAGTGATTTTCTCAAGGCGTTCAATGTTATTATGAGATATTGCCATATGGGTCAAGTTGACTCGATCATGATTATAATCGACATCGAGGGTTTTAGGATTGGCTTCGTGACGAGTCTTGAAAAATTCATTTCTAATACTTTATTAAGAGAATGCAGAAGGCCCACACGGCCTATATGTTAGATGAAGTTGAGGGTTATTATAGGCCTCACTATCTACTTATCATCTTTAAGAACATGTCGATTGGGATGTTTGGATGAGGTATTAGGCAAGGTTCAGTCTCATTCTGTTTTCGCTGTGTGGGTGAAAATTCTTAGAGATTGGGGGTTCCATTCTCCATCATAATAAATGCATTTCTTTCTTTCATTTGTACTTCCATTCTTCTTGATGAAAGCAGTTCTTTTCCTTAAAAATGTACTTGCATGTATGACTGCAAGGTTGGTGGTTCTATGCTTTCTGAGGTAATTGTGAAGAATGACTTTTGTTAATTTCTTCTGTCAGCAGATAGGCATTTCCTCTTTTTAGATTTCCAAATCATGTTGCTTATAATGGAAGTTAATCTGAATAATTCTGATGACCAGAGTGCATATATTGTTCTTATCCTTCAAGAGTATGTCATTTCAAAACTCTTTTGTAGGTTAAACGTCTGACTGAAAATATCCAAACTATATTGGATGCATTGCAATCATCTACTCTTGTGGAAGTAAAGGTCAGTAGACATCAGCTCCTCAATAACCATTTTCCTCTAATTGTAACTGGAAATTTTAATGGGTCTTGGAGTACTATATTTTCTTATCTAAGTTGGGAAAAAAACACTGAAAGTTAGTTAGTTTGGCATCCTTAAAATGTAATAGTAATAGTAGGAATAGGAATGGACGGAAAATTTACAATCATGTTTCTCTAATTCTCGTATATATAAACTACTGTCTTTTTTTTTTCCTTTTCCTCGTAGGGAGATAAAGTAAGGAGGCGAAATGATTATGATAGATGGATTATTCGACCTGGTCAAGTTCCTAATATTGCAGCCCCATTAAGCCCAGTAAGTTCCAATCAGGATATGTTGGCAGCTGGTGTTCAAGGTATTGCACTAGAGAATATTAATCATAGGGACTCTGAAGGTGGACAGGGTGGTGTTCATGTCGAGGCACTCCACAGTAGTAGCCCAACTGGAAATTTGAGTATGCAGGCACAGCCATGTGGTGATGATCGTCCAGGCCAAGTAAATACCAAGGCCGGCCCGGATTGTTCATCGGCTGAAAGGAGTTAGACCAAGTTTGTGCTGTGAACCCATGTCCTTTTGAAGGAAAACTAGATGTGGGTGTAGAGATTAAGTGAGGAGATGTTAGCGACACGGTTTGCACGACTAAAATTCTCTTCTCTTGATGCCAAGTAAATTGGTAAACTGAAGTTATAGAAGAGAAACAATTTTAAAAAGAAAAAGGAAAAAACTAAAACTTTTAAACTTCAAAAAAAAAAAAAATGAAAAAAAAAAAAAACTATGACAGAAGTTCCTTTTGTGGTGGAGGGATGCATTTATGGTTTTGTGGGCTNAAAAAAAAAAAAAAAAAAAAGAAAAACTATGACAGAAGTTCCTTTTGTGGTGGAGGGATGCATTTATGGTTTTGTGGGCTGCTGTTGGCTGGCTGGCTGGCATTGACTTGTTTCTCAAGTTCATGTTCTTTTTTGTTGTGATTTTCGTTTTTGGTGATGATGATGCCATGTTACTTAATGTGGAGAATTTTGATTTGCTTCCCCCCCATGGCTGACCCTCAGCTTGTTTTTTCTTTATATCTTCGGGGTCAGAGTTCTTCGAGTTCTAAGATGAGAGAACACGATGATTCGAGTAAGAACTAGGAGGTTTGGCTTTTTGTTTCTGCAAGGTGAATCAAGAGAGAGGTTGGCTTTTGTTGGATATTATGGAGGCTGGGTTGCAACTACCGTTCTTCTACCATGAAGGTTCTTCTTTCCATCTTTTGTTATTGTATTTTAGGAAACTTTCCCTGTCATTTGCTCTATAAATACCTTCCAACTTTAAATGCTGCATTAGGAACTTCGGAGGTTGATATTATTTTGCTCGAGATATCTTTATTTTATTGATACGGTTTGGAACAAATATTTATGAAAATGGGAATTTGCAATACCAGTTAATAGTGCTGCATTTCTCCCGAATTTTTGTGGCTTCGTTCATTCCCTTGAACCCCTTTTTTCTTTTATCTCTATTCTACTAATGCAATGGTTTTGAGTTTATATGATTTACAAGGAAGATTGGGGCTATACATTTATTTGGCTTCTATGTTGTACCTATACGATACCAAAGGACATTATGGAGTTATTTTAGTGTATGTAACACAAACCATTGTTTTCTCGCATGAACTCTCTCTGTCTCCCTCTCTAAGGTTATTAGGTACCCGAGGAAATAGACGAGAACTTTCAGTTTAGTTTAGTAATCAATAACATGTAAAGATGTGGACCATATTACCATCTCCTCTGTAAGCACTTCTGTTGGTTGACCATCTTCATCTCTCACCCAGAATCGACAAATTGGGCAAGTTTTCTGATTCTGGCATTCATGGAACCACCTCTCGACGCATATCTTGTGAAACTCGTGCTGGCAAGGAAGAATTTGCGCTACCTTTCTCTCCATTACGTTTGACAAACACACAGAACACCACTCCCTCTCCATAGCAGCATCATCCAAGGTTGGATGTGCTGAAGTTTCACAACCTTCGTCCTTGACCCTCTTCATAAAACATGAATCGATAACATCACCACATGATAATGCATCTTTGATACCTGGAAACAATCCGAGGACAATGAAGTTATAGCAGGAGGAGAATATCGTCCTGCACTCCATTCAGTTAAAGGTAAGAAGGATAATTGATTATAGTGCTTTAATA

mRNA sequence

ATTTCCATATGGGCCAGAGCCGTGAAAGCCCATCCTGGCGCGCGCACGCGGGGAAGCGAGGGCATTAAAGTAATTTCAGAAGTAACCATGAACTAACCCTGGCAAAGGCATCCGAAGGACAGAGAGAAACATTTTTAGAGACAGAGAAACCTTCTGTTTCTTAGTCCCTCTTCCCACTCTCCAACTGACCTACGCCTCTTTTCCTTTTCTCTCTGCGATCCGATCCTTCAAGCTTTTGGAAATCCTTCAGAGGAAGATTTTCCGACTCCTTTTGTTCATGAATTCTTGAAAGAAGGAAGTAATTTGCTTTTGATTCTGTTGCTTAATTTTGTTTCCCTTTGTCCTGTTTGCCGTCGATCAAGCTACTTTCTGCCGTCTGAAAGAAACCCTAATTACTAATTTGCGATGGCTGCTTCTACTTTACCTGATGCTGATTCGGTGACGGCATCGAGTGTCGATCATTCTTCTCGTAATTCTGGACAGAGTAATAGCAGCAGCCCCAAATCATCATCACGTCGCTCTGGTGGGCGCACAGTGTCTTCTCCGTGGAACCAGATTGTTCGCGGTGAACTAGACACCGCGGCGGCTGTTTCATCATCTGTATCTTCGACTACTGTTGTTGAACCTGTAACATTTACTTCTTCTTCTTCTGCTACGTCTGAAGAGCCAGTGGGTGAGTGTTACGATGGTGGGAATGGGTCGTCCGCCAATGCTGGAAAGAAGCCAGTGTGGAATAAACTCGCTAATGGAACTGAGGTTGGGCCTGTCATGGGGGCTGTGTCTTGGCCTGCTTTGTCGGAGTCTGCCAAGGGCACACCTAAATCATCTTCGGATTCAATTAAAAGTTTAGGTGATGGATCCGCTGGCGCGCAGGGGATTGGAACTTCATCATCATCATCAAACAACGAAGGTAATAATGACGTTAGTCCTAATCCTGATTCAACTCTTACTCATCCAATAACTTCGCGGCAGAAATCGATGAGGCGCAATGGTTCAAATAGTTCATATAACAGTGCCCTCTCTCAGCAGTCTGCTCATTCAAGTCCTGTAATCGACCCAGCTCCTAACAGTTCTTCAAGGGATCAGACACAGAGAACTGCATTTATATCATCACAATCACATAATGATCATGGTCATCAACAACCACGTAGTTCATTTCGGAGTCGTGGTGGTGCTTCACATCCACGTGGTGATAATTCCCATCATCATAACTATAGTTCTAGGCGTGATCACGATCGTGGAAATCAAGATTGGAATTCAAACCGAAATTTTAATGCACAACCTCATAGAGTGGTTCACAGGTTTATTAGACCACCTCCACCTCCACCTCCTAATACCACTGGCTTTATTTCTTCTCCAACAATGAGGCCTATTGGGGGTCCCCTACCCTTCCCTGATTTTGTACCTCCAGTGGTGTATATTGGTCCTCCTCCTCCTCCTCCTCCCCCTCCTCCAGAGGCTCTTAGAGGTGTACCTTTTGTCGCTCCAATACCACCCAATGCAATGTTTTTTCATGGCCCAGATCCTCATTTGTACGCTATGATAGTGAGTCAGATAGAATACTACTTTAGTGGTGAAAATTTAGTAAAAGACACTTTCTTGAGGCAGAAAATGGATGAAGATGGCTGGGTTCCGGTTAGACTAATAGCAACCTTCAGCAAGGTTAAACGTCTGACTGAAAATATCCAAACTATATTGGATGCATTGCAATCATCTACTCTTGTGGAAGTAAAGGGAGATAAAGTAAGGAGGCGAAATGATTATGATAGATGGATTATTCGACCTGGTCAAGTTCCTAATATTGCAGCCCCATTAAGCCCAGTAAGTTCCAATCAGGATATGTTGGCAGCTGGTGTTCAAGGTATTGCACTAGAGAATATTAATCATAGGGACTCTGAAGGTGGACAGGGTGGTGTTCATGTCGAGGCACTCCACAGTAGTAGCCCAACTGGAAATTTGAGTATGCAGGCACAGCCATGTGGTGATGATCGTCCAGGCCAAGTAAATACCAAGGCCGGCCCGGATTGTTCATCGGCTGAAAGGAGTTAGACCAAGTTTGTGCTGTGAACCCATGTCCTTTTGAAGGAAAACTAGATGTGGGTGTAGAGATTAAGTGAGGAGATGTTAGCGACACGGTTTGCACGACTAAAATTCTCTTCTCTTGATGCCAAGTAAATTGGTAAACTGAAGTTATAGAAGAGAAACAATTTTAAAAAGAAAAAGGAAAAAACTAAAACTTTTAAACTTCAAAAAAAAAAAAAATGAAAAAAAAAAAAAACTATGACAGAAGTTCCTTTTGTGGTGGAGGGATGCATTTATGGTTTTGTGGGCTNAAAAAAAAAAAAAAAAAAAAGAAAAACTATGACAGAAGTTCCTTTTGTGGTGGAGGGATGCATTTATGGTTTTGTGGGCTGCTGTTGGCTGGCTGGCTGGCATTGACTTGTTTCTCAAGTTCATGTTCTTTTTTGTTGTGATTTTCGTTTTTGGTGATGATGATGCCATGTTACTTAATGTGGAGAATTTTGATTTGCTTCCCCCCCATGGCTGACCCTCAGCTTGTTTTTTCTTTATATCTTCGGGGTCAGAGTTCTTCGAGTTCTAAGATGAGAGAACACGATGATTCGAGTAAGAACTAGGAGGTTTGGCTTTTTGTTTCTGCAAGGTGAATCAAGAGAGAGGTTGGCTTTTGTTGGATATTATGGAGGCTGGGTTGCAACTACCGTTCTTCTACCATGAAGGTTCTTCTTTCCATCTTTTGTTATTGTATTTTAGGAAACTTTCCCTGTCATTTGCTCTATAAATACCTTCCAACTTTAAATGCTGCATTAGGAACTTCGGAGGTTGATATTATTTTGCTCGAGATATCTTTATTTTATTGATACGGTTTGGAACAAATATTTATGAAAATGGGAATTTGCAATACCAGTTAATAGTGCTGCATTTCTCCCGAATTTTTGTGGCTTCGTTCATTCCCTTGAACCCCTTTTTTCTTTTATCTCTATTCTACTAATGCAATGGTTTTGAGTTTATATGATTTACAAGGAAGATTGGGGCTATACATTTATTTGGCTTCTATGTTGTACCTATACGATACCAAAGGACATTATGGAGTTATTTTAGTGTATGTAACACAAACCATTGTTTTCTCGCATGAACTCTCTCTGTCTCCCTCTCTAAGGTTATTAGGTACCCGAGGAAATAGACGAGAACTTTCAGTTTAGTTTAGTAATCAATAACATGTAAAGATGTGGACCATATTACCATCTCCTCTGTAAGCACTTCTGTTGGTTGACCATCTTCATCTCTCACCCAGAATCGACAAATTGGGCAAGTTTTCTGATTCTGGCATTCATGGAACCACCTCTCGACGCATATCTTGTGAAACTCGTGCTGGCAAGGAAGAATTTGCGCTACCTTTCTCTCCATTACGTTTGACAAACACACAGAACACCACTCCCTCTCCATAGCAGCATCATCCAAGGTTGGATGTGCTGAAGTTTCACAACCTTCGTCCTTGACCCTCTTCATAAAACATGAATCGATAACATCACCACATGATAATGCATCTTTGATACCTGGAAACAATCCGAGGACAATGAAGTTATAGCAGGAGGAGAATATCGTCCTGCACTCCATTCAGTTAAAGGTAAGAAGGATAATTGATTATAGTGCTTTAATA

Coding sequence (CDS)

ATGGCTGCTTCTACTTTACCTGATGCTGATTCGGTGACGGCATCGAGTGTCGATCATTCTTCTCGTAATTCTGGACAGAGTAATAGCAGCAGCCCCAAATCATCATCACGTCGCTCTGGTGGGCGCACAGTGTCTTCTCCGTGGAACCAGATTGTTCGCGGTGAACTAGACACCGCGGCGGCTGTTTCATCATCTGTATCTTCGACTACTGTTGTTGAACCTGTAACATTTACTTCTTCTTCTTCTGCTACGTCTGAAGAGCCAGTGGGTGAGTGTTACGATGGTGGGAATGGGTCGTCCGCCAATGCTGGAAAGAAGCCAGTGTGGAATAAACTCGCTAATGGAACTGAGGTTGGGCCTGTCATGGGGGCTGTGTCTTGGCCTGCTTTGTCGGAGTCTGCCAAGGGCACACCTAAATCATCTTCGGATTCAATTAAAAGTTTAGGTGATGGATCCGCTGGCGCGCAGGGGATTGGAACTTCATCATCATCATCAAACAACGAAGGTAATAATGACGTTAGTCCTAATCCTGATTCAACTCTTACTCATCCAATAACTTCGCGGCAGAAATCGATGAGGCGCAATGGTTCAAATAGTTCATATAACAGTGCCCTCTCTCAGCAGTCTGCTCATTCAAGTCCTGTAATCGACCCAGCTCCTAACAGTTCTTCAAGGGATCAGACACAGAGAACTGCATTTATATCATCACAATCACATAATGATCATGGTCATCAACAACCACGTAGTTCATTTCGGAGTCGTGGTGGTGCTTCACATCCACGTGGTGATAATTCCCATCATCATAACTATAGTTCTAGGCGTGATCACGATCGTGGAAATCAAGATTGGAATTCAAACCGAAATTTTAATGCACAACCTCATAGAGTGGTTCACAGGTTTATTAGACCACCTCCACCTCCACCTCCTAATACCACTGGCTTTATTTCTTCTCCAACAATGAGGCCTATTGGGGGTCCCCTACCCTTCCCTGATTTTGTACCTCCAGTGGTGTATATTGGTCCTCCTCCTCCTCCTCCTCCCCCTCCTCCAGAGGCTCTTAGAGGTGTACCTTTTGTCGCTCCAATACCACCCAATGCAATGTTTTTTCATGGCCCAGATCCTCATTTGTACGCTATGATAGTGAGTCAGATAGAATACTACTTTAGTGGTGAAAATTTAGTAAAAGACACTTTCTTGAGGCAGAAAATGGATGAAGATGGCTGGGTTCCGGTTAGACTAATAGCAACCTTCAGCAAGGTTAAACGTCTGACTGAAAATATCCAAACTATATTGGATGCATTGCAATCATCTACTCTTGTGGAAGTAAAGGGAGATAAAGTAAGGAGGCGAAATGATTATGATAGATGGATTATTCGACCTGGTCAAGTTCCTAATATTGCAGCCCCATTAAGCCCAGTAAGTTCCAATCAGGATATGTTGGCAGCTGGTGTTCAAGGTATTGCACTAGAGAATATTAATCATAGGGACTCTGAAGGTGGACAGGGTGGTGTTCATGTCGAGGCACTCCACAGTAGTAGCCCAACTGGAAATTTGAGTATGCAGGCACAGCCATGTGGTGATGATCGTCCAGGCCAAGTAAATACCAAGGCCGGCCCGGATTGTTCATCGGCTGAAAGGAGTTAG

Protein sequence

MAASTLPDADSVTASSVDHSSRNSGQSNSSSPKSSSRRSGGRTVSSPWNQIVRGELDTAAAVSSSVSSTTVVEPVTFTSSSSATSEEPVGECYDGGNGSSANAGKKPVWNKLANGTEVGPVMGAVSWPALSESAKGTPKSSSDSIKSLGDGSAGAQGIGTSSSSSNNEGNNDVSPNPDSTLTHPITSRQKSMRRNGSNSSYNSALSQQSAHSSPVIDPAPNSSSRDQTQRTAFISSQSHNDHGHQQPRSSFRSRGGASHPRGDNSHHHNYSSRRDHDRGNQDWNSNRNFNAQPHRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPDFVPPVVYIGPPPPPPPPPPEALRGVPFVAPIPPNAMFFHGPDPHLYAMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIATFSKVKRLTENIQTILDALQSSTLVEVKGDKVRRRNDYDRWIIRPGQVPNIAAPLSPVSSNQDMLAAGVQGIALENINHRDSEGGQGGVHVEALHSSSPTGNLSMQAQPCGDDRPGQVNTKAGPDCSSAERS
BLAST of Cp4.1LG10g00070 vs. Swiss-Prot
Match: LRP1C_ARATH (La-related protein 1C OS=Arabidopsis thaliana GN=LARP1C PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.4e-50
Identity = 187/489 (38.24%), Postives = 264/489 (53.99%), Query Frame = 1

Query: 2   AASTLPDADSVTASSVDHSSRNSGQSNSSSPKSSSRRSGGRTVSSPWNQIVRGELDTAAA 61
           A S  P + S++   +   S N G   +S  +S  R S  R VSSPW QIVRGE +  AA
Sbjct: 4   ATSNNPASSSMSPRRI---SGNHGSPTASVAQSPRRPS--RQVSSPWTQIVRGESEPIAA 63

Query: 62  VS-----SSVSSTTVVEPVTFTSSSSATS-----EEPVGECYDGGNGSSANAGKKPVWNK 121
            +     SS  S   +EP+   S ++ T+     E   G+     +G   NAGKKPVW +
Sbjct: 64  AAAVAGPSSPQSRAPIEPIASVSVAAPTAAVLTVEAAAGDEKSEASGGQDNAGKKPVWKR 123

Query: 122 LANG-TEVGPVMGAVSWPALSESAKG-TPKSSSDSIKSLGD----GSAGA-----QGIGT 181
            +NG +EVGPVMGA SWPALSE+ K  + KSSSDS+KSLGD     SA +     QGI  
Sbjct: 124 PSNGASEVGPVMGASSWPALSETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIAN 183

Query: 182 SSSSSNNEGNNDVSPNPDSTLTHPITSRQKSMR-RNGSNSSYNSALSQQSAHSSPVIDPA 241
           +S  +  +     +PNP      P  SRQ+S + RNG++ S N  +SQ SA  S    P+
Sbjct: 184 ASVPAPKQAGR-ANPNPT-----PNHSRQRSFKQRNGASGSANGTVSQPSAQGSFTELPS 243

Query: 242 PNSSSRDQTQRTAFISSQSHNDHGHQQPRSSFRSRGGASHPRGDNSHHHNYSSRRDHDRG 301
            N S R Q Q+  F +SQ+H    +   R S+R++ G        +HH ++  RR+ + G
Sbjct: 244 HNPSPRGQNQKNGF-ASQNHGGTENPSQRDSYRNQNG--------NHHQSHGGRRNQEHG 303

Query: 302 NQDWNSNRNF-----NAQPHRVVHRFIRPPPPPPPNTTGFISSPTMRPIG---GPLPFPD 361
           NQ+W   R+F     NAQ  R    F+R P            SPT++PI       PFP 
Sbjct: 304 NQNWTFQRSFNGREGNAQSQRGTPAFVRHP------------SPTVQPIPQFMAAQPFPS 363

Query: 362 FVPPVVYIGPPPPPPPPPPEALRGVPFVAPIPPNAMFF-HGPDPHLYAMIVSQIEYYFSG 421
            +P    +      P         +P++ PIP    FF H  DP L+  +  QI+YYFS 
Sbjct: 364 HIPFPTELAQSSYYP--------RMPYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSD 423

Query: 422 ENLVKDTFLRQKMDEDGWVPVRLIATFSKVKRLTENIQTILDALQSSTLVEVKGDKVRRR 460
           ENL+ D +LR  M+ +G+VP+R++A F KV  LT+NIQ I++ALQ+S  VEV+GD +R+R
Sbjct: 424 ENLITDIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKR 452

BLAST of Cp4.1LG10g00070 vs. Swiss-Prot
Match: LRP1B_ARATH (La-related protein 1B OS=Arabidopsis thaliana GN=LARP1B PE=1 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 9.1e-37
Identity = 169/482 (35.06%), Postives = 255/482 (52.90%), Query Frame = 1

Query: 43  TVSSPWNQIVRGELDTAAAVSSSVSSTTVVEPV------TFTSSSSATSEEPVGECYDGG 102
           T SS  N   R  +D++ + S    S+  + P       T + S       P      G 
Sbjct: 4   TASSAANSASRFSIDSSISRSRHGDSSPWLLPSDSHDHPTLSLSQDDPFSAPSVSPPTGN 63

Query: 103 NGSSA-NAGKKP--VWNKLANGT--EVGPVMGAV-SWPALSESAKGTP-KSSS-DSIKSL 162
           N S   NA KKP  VWN  ++ +  +VGPVMGA  SWPALS SA+ +  KS S D+ K  
Sbjct: 64  NSSDYDNADKKPPPVWNMPSSNSSSDVGPVMGAAESWPALSLSARSSSIKSPSLDASKPF 123

Query: 163 GDGSAGAQGIGTSSSSSNNEGNNDVSPNPDSTLTHPIT-SRQKSMRRNGSNSSYNSALSQ 222
            DGS+ +     ++S+++   N   S +  S+    +  S++K  RRN + SS       
Sbjct: 124 PDGSSSSIPPPQATSNTSTNANAGSSVSATSSENSAVNNSQRKPFRRNNNTSS------- 183

Query: 223 QSAHSSPVIDPAPNSSSRDQTQRTAFISSQSHNDHGHQQPRSSFRSRGGASHPRGDNSHH 282
            S+ SS V + AP  ++RDQ       S +     G    R+S R+R  +S+PRG+  HH
Sbjct: 184 -SSTSSNVSNAAP-LNTRDQNH-----SQRGGGSFGSGNFRNSQRNRNSSSYPRGEGLHH 243

Query: 283 HNYSSRRDHDRGNQDWNSNRNFNA-----QPHRVVHRFIRP-----PPPPPPNTTGFISS 342
            N   RR+++ GNQ   S+RN++      QP R V   IRP     PP  P ++  ++++
Sbjct: 244 GN---RRNYEHGNQSGFSHRNYSGRDMHLQPQRGVG-MIRPQMLMGPPSFPASSAQYMAA 303

Query: 343 PTMRPIGGPLPFPDFVPPVVYIGPPPPPPPPPPEALRGVPFVAPIPPNAMFFHGPDPHLY 402
           P +   GGP+ +PD+   V       P P P P  L     V P P   M+F   D  LY
Sbjct: 304 PQLGSYGGPIIYPDYAQHVFM-----PHPSPDPMGL-----VGPFPLQPMYFRNFDAILY 363

Query: 403 AMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIATFSKVKRLTENIQTILDALQSS 462
             I++Q+EYYFS +NL +D  LR +M+++GWVPVR+IA F ++  LT NIQTIL+AL+SS
Sbjct: 364 NKILTQVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSS 423

Query: 463 TLVEVKGDKVRRRNDYDRWIIRPGQVPNIAAPLSPVSSNQDMLAAGVQGIALENINHRDS 500
            +VE++G+ +RRR D+D++++   + P+ + P +  S+N    A+ V  I    ++ R  
Sbjct: 424 EVVEIQGETLRRRGDWDKYLL--PREPSRSGPAAGASNN----ASLVSQIESMTLSERSR 451

BLAST of Cp4.1LG10g00070 vs. Swiss-Prot
Match: LAR1B_HUMAN (La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 2.3e-16
Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = 1

Query: 380 IVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIATFSKVKRLTENIQTILDALQSSTL 439
           I  QIEYYFS ENL +D FLR KMDE G++P+ LIA F +V+ LT N+  IL+AL+ ST 
Sbjct: 219 IKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTE 278

Query: 440 VEVKGDKVRRRNDYDRWIIRPGQVPNIAAP 470
           VE+  +K+R++ + ++W I PG  P    P
Sbjct: 279 VEIVDEKMRKKIEPEKWPI-PGPPPRSVPP 307

BLAST of Cp4.1LG10g00070 vs. Swiss-Prot
Match: LRP1A_ARATH (La-related protein 1A OS=Arabidopsis thaliana GN=LARP1A PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 4.0e-16
Identity = 66/162 (40.74%), Postives = 86/162 (53.09%), Query Frame = 1

Query: 306 PPPPNTTGFISSPTMRPIGGPL--PFPDFVPPVVYIGPPPPPPPPPPEALRGV--PFVAP 365
           P       F   P M P  G L  P P F  PV Y+      P PPP A+RG   P  AP
Sbjct: 208 PQGAGPRNFGRPPFMGPAPGFLVGPGPGFPGPVYYL------PGPPPGAIRGPYPPRFAP 267

Query: 366 IPPNAMFFHGP---DPH---LYAMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIA 425
            P N     GP    P    L   ++ Q+EYYFS ENL  D +L   MDE+GWVP ++IA
Sbjct: 268 YPVN----QGPPILSPEKLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIA 327

Query: 426 TFSKVKRLTENIQTILDALQSSTLVEVKGDKVRRRNDYDRWI 458
            F +VK +T ++  I+ AL  S  VEV+GD++R+R+ +  WI
Sbjct: 328 GFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWI 359

BLAST of Cp4.1LG10g00070 vs. Swiss-Prot
Match: LARP1_HUMAN (La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 1.2e-15
Identity = 41/81 (50.62%), Postives = 59/81 (72.84%), Query Frame = 1

Query: 380 IVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIATFSKVKRLTENIQTILDALQSSTL 439
           I  QIEYYFS +NL +D FLR+KMD DG++P+ LIA+F +V+ LT +I  I  AL+ S +
Sbjct: 407 IKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKV 466

Query: 440 VEVKGDKVRRRNDYDRWIIRP 461
           VE+  +KVRRR + ++W + P
Sbjct: 467 VEIVDEKVRRREEPEKWPLPP 487

BLAST of Cp4.1LG10g00070 vs. TrEMBL
Match: A0A0A0KJG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507180 PE=4 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 8.9e-148
Identity = 282/359 (78.55%), Postives = 306/359 (85.24%), Query Frame = 1

Query: 192 MRRNGSNSSYNSALSQQSAHSSPVIDPAPNSSSRDQTQRTAFISSQSHNDHGHQQPRSSF 251
           MRRNGS++SYNS+L QQSA SSPVID APN+S +DQTQRT F+SSQSH+DHGHQQPR+S+
Sbjct: 1   MRRNGSSNSYNSSLPQQSAPSSPVIDTAPNNSPKDQTQRTTFVSSQSHSDHGHQQPRNSY 60

Query: 252 RSRGGASHPRGDNSHHHNYSSRRDHDRGNQDWNSNRNFNAQPHRVVHRFIRPPPPPPPNT 311
           RSRGG SHPRGDNSHHHNY SRRDHDRGNQDWNSNRN+NAQPHRVVHRFIRP PPPPPNT
Sbjct: 61  RSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRFIRPSPPPPPNT 120

Query: 312 TGFISSPTMRPIGGPLPFPDFVPPVVYIGPPPPPPPPPPEALRGVPFVAPIPPNAMFFHG 371
           TG+ISSPTMR IGGPLPFPDF PPVVYIG      PPPPEALRGVPFVAPI PNAMFFHG
Sbjct: 121 TGYISSPTMRAIGGPLPFPDFAPPVVYIG------PPPPEALRGVPFVAPISPNAMFFHG 180

Query: 372 PDPHLYAMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIATFSKVKRLTENIQTIL 431
           PDP LYAMIVSQIEYYFSGENL+KDTFLRQ M+E+GWVPV+LIA+FSKV+RLTENIQTIL
Sbjct: 181 PDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTENIQTIL 240

Query: 432 DALQSSTLVEVKGDKVRRRNDYDRWIIRPGQVPNIAAPLSPV---SSNQDMLAAGVQGIA 491
           DALQSST+VEVKGD VRRR+DYDRWIIRPGQVPNI+ PLSP+   SS QDMLAAGV+GIA
Sbjct: 241 DALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSKQDMLAAGVKGIA 300

Query: 492 LENINHRDSEGGQGGVHV-EALHSSSPTGNLSMQAQPCGDDRPGQVNTKAGPDCSSAER 547
           LENINHR SEGGQG VHV EA H                    G  NTKAG + SS+ER
Sbjct: 301 LENINHRVSEGGQGDVHVDEASH--------------------GDNNTKAGSEHSSSER 333

BLAST of Cp4.1LG10g00070 vs. TrEMBL
Match: A0A067FV98_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g039779mg PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 2.8e-101
Identity = 238/467 (50.96%), Postives = 311/467 (66.60%), Query Frame = 1

Query: 54  GELDTAAAVSSSVSSTTVVEPVTFTSSSSATSEEPVGECYDGGNGSSANAGKKPVWNKL- 113
           G    A   SSS  ST+V+E     ++++A  E+   EC +G  GS     K+P WN+  
Sbjct: 2   GREPIALVSSSSSQSTSVIELAA--AAAAAADEDNGAECGNGNAGS-----KRPPWNRQP 61

Query: 114 ANGT-EVGPVMGAVSWPALSESAKGTP---KSSSDSIKSLGDGSAGA---QGIGTSSSSS 173
           +NG  E+ PVMGA SWPALSE+ +G+    KSSSDS+K   DGS+ +   QG   ++SSS
Sbjct: 62  SNGAAEMEPVMGAHSWPALSETTRGSSSSTKSSSDSLKGSVDGSSSSSVLQGTAATNSSS 121

Query: 174 NNEGNNDVSPNPDSTLTHPITSRQKSMRRNGSNSSYNSALSQQSAHSSPVIDPAPNSSS- 233
           + + +N+ +PN  ST  H  ++RQ+SM+RN S+SS N  L Q  A    V++   N+ S 
Sbjct: 122 HKQVSNNANPN--STTNHAASNRQRSMKRNNSHSSSNGGLPQPPASQGSVVEGRSNNPSP 181

Query: 234 RDQTQRTAFISSQSHNDHGHQQPRSSFRSRGGASHPRGDNSHHHNYSSRRDHDRGNQDWN 293
           RD TQ++ F  SQ H  + H  PR SF+ R G  HPRGD SHHHNY  RRD DRGNQDWN
Sbjct: 182 RDHTQKSGF-GSQFHGGNDHPHPRGSFKHRNGNQHPRGDGSHHHNYGGRRDQDRGNQDWN 241

Query: 294 SNRNFNA-----QPHRVVHRFIR----PPPPPPPNTTGFISSPTMRPIGGPLPFPDFVPP 353
           S+RN++      QP RVV RF R    PPPPPPP+++ FI  P +RP G P+ FP+F  P
Sbjct: 242 SHRNYSGRDAHMQPQRVVQRFTRHPPPPPPPPPPSSSPFIPPPPVRPFGSPIGFPEFASP 301

Query: 354 VVYIGPPPPPPPPPPEALRGVPFVAPIPPNAMFFHGPDPHLYAMIVSQIEYYFSGENLVK 413
           V Y+         PPEALRGVPFVAPIPP+A+FF  PDP L++ IV+QI+YYFS ENLVK
Sbjct: 302 VYYVA------AAPPEALRGVPFVAPIPPHAVFFPAPDPQLHSRIVTQIDYYFSNENLVK 361

Query: 414 DTFLRQKMDEDGWVPVRLIATFSKVKRLTENIQTILDALQSSTLVEVKGDKVRRRNDYDR 473
           DTFLRQ MD+ GWVP+RLIA F+KV  LT+NIQ ILDAL+SST+VEV+GD++R+RND+ R
Sbjct: 362 DTFLRQNMDDQGWVPIRLIAGFNKVSLLTDNIQLILDALRSSTVVEVQGDRIRKRNDWMR 421

Query: 474 WIIRPGQVPNIAAPLSPVSSNQDMLAAGVQGIALE--NINHRDSEGG 501
           WI+ PG+  ++ +P S   S  DML+A VQ I+L+   +NH  S  G
Sbjct: 422 WIMPPGKFSSLPSPQSQGKSGIDMLSAQVQSISLDQKTLNHSRSSSG 452

BLAST of Cp4.1LG10g00070 vs. TrEMBL
Match: E0CU57_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0349g00060 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.9e-94
Identity = 267/579 (46.11%), Postives = 351/579 (60.62%), Query Frame = 1

Query: 13  TASSVDHSSRNSGQSNSSSPKSSSRRSGGR-TVSSPWNQIVRGELDT-AAAVSSSVSSTT 72
           +A +  H S        SSPKS  RRS  R  V+SPW Q+VRGE ++  AA SS VSS  
Sbjct: 7   SAPTGPHLSPRYSPDGHSSPKS--RRSAARGAVTSPWTQVVRGESESITAAPSSPVSSQE 66

Query: 73  VVEPVTFTSSSSATSEEPVG-----------ECYDGGNGSSANAGKKPVWNKLANGT-EV 132
            +   +  S + ATS+ P             E  D GNG   NAGK+P WNK +NG  EV
Sbjct: 67  QIVVSSDCSPTKATSDSPASPEDSSQVEAQLESSDNGNG---NAGKRPAWNKPSNGVAEV 126

Query: 133 GPVMGAVSWPALSESAKGTPKSSSDSIKSLGDGSAGA-------QGIGTSSSSSNNEGNN 192
           GPVMGA SWPALSESA+ + KS+SDS+KS  DGS          QG G +SS S+ + NN
Sbjct: 127 GPVMGASSWPALSESARASAKSASDSLKSPTDGSISTPPAQVHVQGSGNASSPSHKQVNN 186

Query: 193 DVSPNPDSTLTHPITSRQKSMRR---NGSNSSYNSALSQQSAHSSPVIDPAPNSSS-RDQ 252
           +  P P ST +H + +RQKSM+R   +G +SS N+ L Q +A   PV++  PN+SS RD 
Sbjct: 187 N--PIPSSTPSHALPTRQKSMKRGDRSGGSSSANAGLPQPAAPQGPVMEVPPNNSSPRDH 246

Query: 253 T---------QRTAFI-SSQSHNDHGHQQPRSSFRSRGGASHPRGDNSHHHNYSSRRDHD 312
           T         QR  F+  S S ND+ HQ  R S+R    A H RGD SHHH Y  RRD D
Sbjct: 247 TNRSIHPEGGQRGGFVPQSHSGNDYPHQ--RGSYRKGNSAPHSRGDGSHHHGYGGRRDQD 306

Query: 313 RGNQDWNSNRNFNAQPH---RVVHR-FIRPPPPPPPNTTGFISSPTMRPIGGPLPFPDFV 372
           R N DWN +RNFN +PH   RVV R FIR   PP  ++  FI+ P +RP G P+ + +  
Sbjct: 307 RVNHDWNPHRNFNREPHMQPRVVARGFIR---PPSHSSAQFIAPPHLRPFGNPILYQELA 366

Query: 373 PP---VVYIGPPPPPPPPPPEALRGVPFVAPIPPNAMFFHGPDPHLYAMIVSQIEYYFSG 432
            P   VVY+      P P  + LR VPFVAP+ P+ MFF   D  L+A +V+QI+YYFS 
Sbjct: 367 SPVSQVVYV------PAPHADPLRTVPFVAPM-PHPMFFPPQDHQLHAKLVAQIDYYFSN 426

Query: 433 ENLVKDTFLRQKMDEDGWVPVRLIATFSKVKRLTENIQTILDALQSSTLVEVKGDKVRRR 492
           ENL+KD +LRQ MDE GWVPV+LIA F KVK LTENIQ IL+A+++ST+VEV+GDK+R+R
Sbjct: 427 ENLIKDIYLRQNMDEQGWVPVKLIAGFKKVKLLTENIQLILEAVRTSTVVEVQGDKLRKR 486

Query: 493 NDYDRWIIRPG-QVPNIAAPLSPVSSNQDMLAAGVQGIAL-ENINHRDSEGGQGGVHVEA 548
            D+ +WI+ P  Q   +++P S  SS+ D LAA  Q + L E   +  +   +  VHVEA
Sbjct: 487 GDWMKWIMPPSVQFSPLSSPQSIGSSSYDTLAARFQNVTLGEQTTNYSTVRSEADVHVEA 546

BLAST of Cp4.1LG10g00070 vs. TrEMBL
Match: A0A061DF68_THECC (Winged-helix DNA-binding transcription factor family protein, putative OS=Theobroma cacao GN=TCM_000149 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 6.9e-92
Identity = 250/532 (46.99%), Postives = 331/532 (62.22%), Query Frame = 1

Query: 13  TASSVDHSSRNSGQSNSSSPKSSSRRSGGRTVSSPWNQIVRGELDTAAAVSSSVSSTTVV 72
           TA+    ++  +   + SSP  S R +  R VSSPW QIVRGE +  A V  S S+++  
Sbjct: 7   TANFNTSAAVTAANHSPSSPNQSHRAT--RVVSSPWTQIVRGESEPIAGVPLSPSTSSSS 66

Query: 73  EPVTFTSS---SSATSEEPVGECYDGGNGSSANAGKKPVWNKLANG-TEVGPVMGAVSWP 132
            P+        ++A  EE V    +GG+G + NAGK+P WNK +NG  E G VMGA  WP
Sbjct: 67  SPLAAVIEPPVNAAVEEEGV---ENGGSGPNGNAGKRPAWNKPSNGAAEFGAVMGAHMWP 126

Query: 133 ALSESAKGTPKSSSDSIKSLGDGSAG-----AQGIGTS-SSSSNNEGNNDVSPNPDSTLT 192
           ALSESA+ + KSSSDS K+  DGS+      +QG G + SSSS  + +N+V+ N ++T  
Sbjct: 127 ALSESARVSSKSSSDSSKASPDGSSSPAVPVSQGSGNALSSSSQKQVSNNVNSNSNATPN 186

Query: 193 HPITSRQKSMRRNGSNSSYNSALSQ-QSAHSSPVIDPAPNSSSRDQTQRTAFISSQSHND 252
           + +  RQ+SM+RN +NS+ N  L+Q Q     PV +   N+ SRD  QR  F+S      
Sbjct: 187 NAMPVRQRSMKRNSNNSASNGGLTQPQPQPQGPVAEATANNPSRDHIQRGGFVSQPHSGG 246

Query: 253 HGHQQPRSSFRSRGGASHPRGDNSHHHNYSSRRDHDRGNQDWNSNRNFNA-----QPHRV 312
           + H  PR+SFR+R G  HPRGD SHH NY  RR+ D GNQDWN  RNFN+     QP RV
Sbjct: 247 NDHPHPRNSFRNRNGGPHPRGDGSHHQNYGGRRNQDHGNQDWN-GRNFNSRDGHMQP-RV 306

Query: 313 VHRFIR-PPPPPPPNTTGFISSPTMRPIGGPLPFPDFVPPVVYIGPPPPPPPPPPEALRG 372
           V R +R PPPPPPPNT  FI+ P +RP G P+ FP+ +P  VY+      P PPPE+LRG
Sbjct: 307 VSRLMRHPPPPPPPNTAPFITPPPVRPFGTPMGFPE-LPSHVYL-----LPAPPPESLRG 366

Query: 373 VPFVAPIPPNAMFFHGPDP---HLYAMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVR 432
           VPFVAP+P   +FF  P+P    L+A IV+QI+YYFS ENL+KDT+LRQ MD+ GWV ++
Sbjct: 367 VPFVAPMP--QVFFPAPEPQDHQLHARIVNQIDYYFSNENLIKDTYLRQNMDDQGWVSIK 426

Query: 433 LIATFSKVKRLTENIQTILDALQSSTLVEVKGDKVRRRNDYDRWIIRPGQVPNIAAPLSP 492
           LIA F KV  LT+NIQ ILDAL+SST+VEV+GDKVR+R D+ RWI+ P       +   P
Sbjct: 427 LIAGFKKVSFLTDNIQLILDALRSSTVVEVQGDKVRKRIDWMRWIMPP-------SVQFP 486

Query: 493 VSSNQDMLAAGVQGIALENINHRDSEG-GQGGVHVEALHSSSPTGNLSMQAQ 524
             S QDML + VQ I+L+      S    Q   + + L   S +G+ S Q++
Sbjct: 487 TMSGQDMLVSRVQNISLDQRTANQSGARSQEDAYADGLSGRSLSGDFSNQSR 516

BLAST of Cp4.1LG10g00070 vs. TrEMBL
Match: M5VVT5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003845mg PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.0e-91
Identity = 250/560 (44.64%), Postives = 334/560 (59.64%), Query Frame = 1

Query: 20  SSRNSGQSNSSSPKSSSRRSGGRTVSSPWNQIVRGELDTAAAVSSSVSSTTVVEPVTF-- 79
           S R++G+S  SSP + SRR+  R VSSPW QIVRGE +  A   SS  ST V EP     
Sbjct: 23  SPRHAGES-VSSPTTQSRRAA-RAVSSPWTQIVRGESEPIAVAPSS-PSTAVTEPAVAAA 82

Query: 80  ------TSSSSATSEE-----------PVGECYDGGNGSSANAGKKPVWNKLANGT-EVG 139
                 +SSSS+ S+            P  E   G    + NAGK+P WNK +NG  EVG
Sbjct: 83  PPPPPPSSSSSSQSQSNSAPQSNSSSPPPAEESVGEGSENGNAGKRPAWNKPSNGAIEVG 142

Query: 140 PVMGAVSWPALSESAKGTPKSSSDSIKSLGDGSAG---AQGIGTSSSSSNNEGNNDVSPN 199
           PVMGAVSWPALSESA+ + K S + +K + +       +QG GT+ +SS  + N+  +PN
Sbjct: 143 PVMGAVSWPALSESARASTKLSPEPLKGVSEPPLSVSMSQGTGTTPTSSPKQVNSSSTPN 202

Query: 200 PDSTLTHPITSRQKSMRRNGSNSSYNSALSQQSAHSSPVIDPAPNS-SSRDQTQRTAFIS 259
                 H   +RQ+SM+RN +++S N  L Q  + +   ++  PN+ S ++ T R+A I 
Sbjct: 203 ------HTGPARQRSMKRNNASASSNGGLPQHQSSAGQGVETVPNNPSPKEHTHRSA-IG 262

Query: 260 SQSHNDHGHQQPRSSFRSRGGASHPRGDNSHHHNYSSRRDHDRGNQDWNSNRNFN----- 319
           SQSH+++ H Q R+SFR+R G SHPRGD SHHHNY  RRD DRG QDWN++RNFN     
Sbjct: 263 SQSHSNNDHPQQRNSFRNRNGGSHPRGDGSHHHNY--RRDQDRGGQDWNTHRNFNNRDNH 322

Query: 320 AQPHRVVHRFIRP---PPPPPPNTTGFISSPTMRPIGGPLPFPDFVPPVVYIGPPPPPPP 379
             P R V R +RP   PPPPPPN   FI  P MR  GGP+ F +  P +VY+   P  P 
Sbjct: 323 MHPQRSVPRMMRPHQTPPPPPPNAAQFIHQPQMRAFGGPIGF-EMQPQLVYVTHTPHEP- 382

Query: 380 PPPEALRGVPFVAPIPPNAMFFHGPDPHLYAMIVSQIEYYFSGENLVKDTFLRQKMDEDG 439
                  GVPFVAP+  + M F  PDP L+  I++QIEYYFS +NL+KDTFLR+ MD+ G
Sbjct: 383 ------LGVPFVAPM-RHPMVFPAPDPQLHTKIINQIEYYFSNDNLIKDTFLRRNMDDQG 442

Query: 440 WVPVRLIATFSKVKRLTENIQTILDALQSSTLVEVKGDKVRRRNDYDRWIIRPGQVPNIA 499
           WV ++LIA F+KV  LT+NIQ ILDA++ ST+VEV+GDK+RRRND+ RW++   Q PN +
Sbjct: 443 WVRIKLIAGFNKVMNLTDNIQLILDAMRMSTVVEVQGDKIRRRNDWMRWVMPTAQPPNAS 502

Query: 500 APLSPVSSNQDMLAAGVQGIALENINHRDSEGGQGGVHVEALHSSSPTGNLSMQAQPCGD 548
              +   S QD+L+A +Q IAL+       E     +++E           S Q QP   
Sbjct: 503 GSQALGKSGQDILSAQIQSIALD-------EKTASNINIEN----------SSQPQPSSG 544

BLAST of Cp4.1LG10g00070 vs. TAIR10
Match: AT4G35890.1 (AT4G35890.1 winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 202.2 bits (513), Expect = 8.1e-52
Identity = 187/489 (38.24%), Postives = 264/489 (53.99%), Query Frame = 1

Query: 2   AASTLPDADSVTASSVDHSSRNSGQSNSSSPKSSSRRSGGRTVSSPWNQIVRGELDTAAA 61
           A S  P + S++   +   S N G   +S  +S  R S  R VSSPW QIVRGE +  AA
Sbjct: 4   ATSNNPASSSMSPRRI---SGNHGSPTASVAQSPRRPS--RQVSSPWTQIVRGESEPIAA 63

Query: 62  VS-----SSVSSTTVVEPVTFTSSSSATS-----EEPVGECYDGGNGSSANAGKKPVWNK 121
            +     SS  S   +EP+   S ++ T+     E   G+     +G   NAGKKPVW +
Sbjct: 64  AAAVAGPSSPQSRAPIEPIASVSVAAPTAAVLTVEAAAGDEKSEASGGQDNAGKKPVWKR 123

Query: 122 LANG-TEVGPVMGAVSWPALSESAKG-TPKSSSDSIKSLGD----GSAGA-----QGIGT 181
            +NG +EVGPVMGA SWPALSE+ K  + KSSSDS+KSLGD     SA +     QGI  
Sbjct: 124 PSNGASEVGPVMGASSWPALSETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIAN 183

Query: 182 SSSSSNNEGNNDVSPNPDSTLTHPITSRQKSMR-RNGSNSSYNSALSQQSAHSSPVIDPA 241
           +S  +  +     +PNP      P  SRQ+S + RNG++ S N  +SQ SA  S    P+
Sbjct: 184 ASVPAPKQAGR-ANPNPT-----PNHSRQRSFKQRNGASGSANGTVSQPSAQGSFTELPS 243

Query: 242 PNSSSRDQTQRTAFISSQSHNDHGHQQPRSSFRSRGGASHPRGDNSHHHNYSSRRDHDRG 301
            N S R Q Q+  F +SQ+H    +   R S+R++ G        +HH ++  RR+ + G
Sbjct: 244 HNPSPRGQNQKNGF-ASQNHGGTENPSQRDSYRNQNG--------NHHQSHGGRRNQEHG 303

Query: 302 NQDWNSNRNF-----NAQPHRVVHRFIRPPPPPPPNTTGFISSPTMRPIG---GPLPFPD 361
           NQ+W   R+F     NAQ  R    F+R P            SPT++PI       PFP 
Sbjct: 304 NQNWTFQRSFNGREGNAQSQRGTPAFVRHP------------SPTVQPIPQFMAAQPFPS 363

Query: 362 FVPPVVYIGPPPPPPPPPPEALRGVPFVAPIPPNAMFF-HGPDPHLYAMIVSQIEYYFSG 421
            +P    +      P         +P++ PIP    FF H  DP L+  +  QI+YYFS 
Sbjct: 364 HIPFPTELAQSSYYP--------RMPYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSD 423

Query: 422 ENLVKDTFLRQKMDEDGWVPVRLIATFSKVKRLTENIQTILDALQSSTLVEVKGDKVRRR 460
           ENL+ D +LR  M+ +G+VP+R++A F KV  LT+NIQ I++ALQ+S  VEV+GD +R+R
Sbjct: 424 ENLITDIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKR 452

BLAST of Cp4.1LG10g00070 vs. TAIR10
Match: AT5G66100.1 (AT5G66100.1 winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 156.4 bits (394), Expect = 5.1e-38
Identity = 169/482 (35.06%), Postives = 255/482 (52.90%), Query Frame = 1

Query: 43  TVSSPWNQIVRGELDTAAAVSSSVSSTTVVEPV------TFTSSSSATSEEPVGECYDGG 102
           T SS  N   R  +D++ + S    S+  + P       T + S       P      G 
Sbjct: 5   TASSAANSASRFSIDSSISRSRHGDSSPWLLPSDSHDHPTLSLSQDDPFSAPSVSPPTGN 64

Query: 103 NGSSA-NAGKKP--VWNKLANGT--EVGPVMGAV-SWPALSESAKGTP-KSSS-DSIKSL 162
           N S   NA KKP  VWN  ++ +  +VGPVMGA  SWPALS SA+ +  KS S D+ K  
Sbjct: 65  NSSDYDNADKKPPPVWNMPSSNSSSDVGPVMGAAESWPALSLSARSSSIKSPSLDASKPF 124

Query: 163 GDGSAGAQGIGTSSSSSNNEGNNDVSPNPDSTLTHPIT-SRQKSMRRNGSNSSYNSALSQ 222
            DGS+ +     ++S+++   N   S +  S+    +  S++K  RRN + SS       
Sbjct: 125 PDGSSSSIPPPQATSNTSTNANAGSSVSATSSENSAVNNSQRKPFRRNNNTSS------- 184

Query: 223 QSAHSSPVIDPAPNSSSRDQTQRTAFISSQSHNDHGHQQPRSSFRSRGGASHPRGDNSHH 282
            S+ SS V + AP  ++RDQ       S +     G    R+S R+R  +S+PRG+  HH
Sbjct: 185 -SSTSSNVSNAAP-LNTRDQNH-----SQRGGGSFGSGNFRNSQRNRNSSSYPRGEGLHH 244

Query: 283 HNYSSRRDHDRGNQDWNSNRNFNA-----QPHRVVHRFIRP-----PPPPPPNTTGFISS 342
            N   RR+++ GNQ   S+RN++      QP R V   IRP     PP  P ++  ++++
Sbjct: 245 GN---RRNYEHGNQSGFSHRNYSGRDMHLQPQRGVG-MIRPQMLMGPPSFPASSAQYMAA 304

Query: 343 PTMRPIGGPLPFPDFVPPVVYIGPPPPPPPPPPEALRGVPFVAPIPPNAMFFHGPDPHLY 402
           P +   GGP+ +PD+   V       P P P P  L     V P P   M+F   D  LY
Sbjct: 305 PQLGSYGGPIIYPDYAQHVFM-----PHPSPDPMGL-----VGPFPLQPMYFRNFDAILY 364

Query: 403 AMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIATFSKVKRLTENIQTILDALQSS 462
             I++Q+EYYFS +NL +D  LR +M+++GWVPVR+IA F ++  LT NIQTIL+AL+SS
Sbjct: 365 NKILTQVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSS 424

Query: 463 TLVEVKGDKVRRRNDYDRWIIRPGQVPNIAAPLSPVSSNQDMLAAGVQGIALENINHRDS 500
            +VE++G+ +RRR D+D++++   + P+ + P +  S+N    A+ V  I    ++ R  
Sbjct: 425 EVVEIQGETLRRRGDWDKYLL--PREPSRSGPAAGASNN----ASLVSQIESMTLSERSR 452

BLAST of Cp4.1LG10g00070 vs. TAIR10
Match: AT5G21160.3 (AT5G21160.3 LA RNA-binding protein)

HSP 1 Score: 87.8 bits (216), Expect = 2.2e-17
Identity = 66/162 (40.74%), Postives = 86/162 (53.09%), Query Frame = 1

Query: 306 PPPPNTTGFISSPTMRPIGGPL--PFPDFVPPVVYIGPPPPPPPPPPEALRGV--PFVAP 365
           P       F   P M P  G L  P P F  PV Y+      P PPP A+RG   P  AP
Sbjct: 208 PQGAGPRNFGRPPFMGPAPGFLVGPGPGFPGPVYYL------PGPPPGAIRGPYPPRFAP 267

Query: 366 IPPNAMFFHGP---DPH---LYAMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIA 425
            P N     GP    P    L   ++ Q+EYYFS ENL  D +L   MDE+GWVP ++IA
Sbjct: 268 YPVN----QGPPILSPEKLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIA 327

Query: 426 TFSKVKRLTENIQTILDALQSSTLVEVKGDKVRRRNDYDRWI 458
            F +VK +T ++  I+ AL  S  VEV+GD++R+R+ +  WI
Sbjct: 328 GFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWI 359

BLAST of Cp4.1LG10g00070 vs. TAIR10
Match: AT5G46250.1 (AT5G46250.1 RNA-binding protein)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-09
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 1

Query: 372 PDPHLYAMIVSQIEYYFSGENLVKDTFL--RQKMDEDGWVPVRLIATFSKVKRLTENIQT 431
           P   L   I+ Q+EYYFS ENL  D FL    K ++ G+VP+  IATF K+K+LT +   
Sbjct: 99  PIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHAL 158

Query: 432 ILDALQSSTLVEVKGD--KVRR 450
           I+ AL+ S+ + V  D  KV+R
Sbjct: 159 IVSALKESSFLVVSADEKKVKR 180

BLAST of Cp4.1LG10g00070 vs. NCBI nr
Match: gi|449434124|ref|XP_004134846.1| (PREDICTED: la-related protein 1C [Cucumis sativus])

HSP 1 Score: 802.0 bits (2070), Expect = 6.6e-229
Identity = 448/556 (80.58%), Postives = 479/556 (86.15%), Query Frame = 1

Query: 1   MAASTLPDADSVTASSVDHSSRNSGQSNSSS----PKSSSRRSGGRTVSS-PWNQIVRGE 60
           MAAS LPDADSVTAS  DHS RNSGQ+N+SS    PKSSSRRSGGRTVSS PW +IVRGE
Sbjct: 1   MAASNLPDADSVTASIADHSPRNSGQNNNSSSGSSPKSSSRRSGGRTVSSSPWTRIVRGE 60

Query: 61  LDTAAAVSSSVSSTTVVEPVTFTSSSSATSEEPVGECYDGGNGSSANAGKKPVWNKLANG 120
           +D AA VSSS S T VVEPV+F SSSS  SEEPVGE YDGGNGS+ANAGKKP WNKLANG
Sbjct: 61  IDVAAVVSSSASPTAVVEPVSFFSSSS--SEEPVGESYDGGNGSTANAGKKPAWNKLANG 120

Query: 121 TEVGPVMGAVSWPALSESAKGTPKSSSDSIKSLGDGSAGAQGIGTSSS-SSNNEGNNDVS 180
           TE GPVMGAVSWPALSESAKGTPKSSSDS+KSLGDGSAGAQG GTSSS SSN EGNNDVS
Sbjct: 121 TEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQGTGTSSSASSNKEGNNDVS 180

Query: 181 PNPDSTLTHPITSRQKSMRRNGSNSSYNSALSQQSAHSSPVIDPAPNSSSRDQTQRTAFI 240
           PNPDSTLTHPITSRQKSMRRNGS++SYNS+L QQSA SSPVID APN+S +DQTQRT F+
Sbjct: 181 PNPDSTLTHPITSRQKSMRRNGSSNSYNSSLPQQSAPSSPVIDTAPNNSPKDQTQRTTFV 240

Query: 241 SSQSHNDHGHQQPRSSFRSRGGASHPRGDNSHHHNYSSRRDHDRGNQDWNSNRNFNAQPH 300
           SSQSH+DHGHQQPR+S+RSRGG SHPRGDNSHHHNY SRRDHDRGNQDWNSNRN+NAQPH
Sbjct: 241 SSQSHSDHGHQQPRNSYRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPH 300

Query: 301 RVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPDFVPPVVYIGPPPPPPPPPPEALR 360
           RVVHRFIRP PPPPPNTTG+ISSPTMR IGGPLPFPDF PPVVYIGPPPP      EALR
Sbjct: 301 RVVHRFIRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPP------EALR 360

Query: 361 GVPFVAPIPPNAMFFHGPDPHLYAMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLI 420
           GVPFVAPI PNAMFFHGPDP LYAMIVSQIEYYFSGENL+KDTFLRQ M+E+GWVPV+LI
Sbjct: 361 GVPFVAPISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLI 420

Query: 421 ATFSKVKRLTENIQTILDALQSSTLVEVKGDKVRRRNDYDRWIIRPGQVPNIAAPLSPV- 480
           A+FSKV+RLTENIQTILDALQSST+VEVKGD VRRR+DYDRWIIRPGQVPNI+ PLSP+ 
Sbjct: 421 ASFSKVQRLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLS 480

Query: 481 --SSNQDMLAAGVQGIALENINHRDSEGGQGGVHV-EALHSSSPTGNLSMQAQPCGDDRP 540
             SS QDMLAAGV+GIALENINHR SEGGQG VHV EA H                    
Sbjct: 481 PGSSKQDMLAAGVKGIALENINHRVSEGGQGDVHVDEASH-------------------- 528

Query: 541 GQVNTKAGPDCSSAER 547
           G  NTKAG + SS+ER
Sbjct: 541 GDNNTKAGSEHSSSER 528

BLAST of Cp4.1LG10g00070 vs. NCBI nr
Match: gi|659080562|ref|XP_008440860.1| (PREDICTED: la-related protein 1C [Cucumis melo])

HSP 1 Score: 798.1 bits (2060), Expect = 9.5e-228
Identity = 445/557 (79.89%), Postives = 475/557 (85.28%), Query Frame = 1

Query: 1   MAASTLPDADSVTASSVDHSSRNSGQSNSSS----PKSSSRRSGGRTVSS-PWNQIVRGE 60
           MAAS LPDADSVTAS  DHS RNSGQ+N+SS    PKSSSRRSGGRTVSS PW +IVRGE
Sbjct: 1   MAASNLPDADSVTASIADHSPRNSGQNNNSSSGSSPKSSSRRSGGRTVSSSPWTRIVRGE 60

Query: 61  LDTAAAVSSSVSSTTVVEPVTFTSSSSATSEEPVGECYDGGNGSSANAGKKPVWNKLANG 120
           +D AA VSSS S T VVEPV+F SSS    EEPVGE YDGGNGS+ANAGKKP WNKLANG
Sbjct: 61  IDVAAVVSSSASPTAVVEPVSFFSSS----EEPVGESYDGGNGSTANAGKKPAWNKLANG 120

Query: 121 TEVGPVMGAVSWPALSESAKGTPKSSSDSIKSLGDGSAGAQGIGTSSSS-SNNEGNNDVS 180
           TE GPVMGAVSWPALSESAK TPKSSSDS+KSLGDGS GAQG GTSSS+ SN EGNNDVS
Sbjct: 121 TEAGPVMGAVSWPALSESAKATPKSSSDSLKSLGDGSTGAQGTGTSSSAPSNKEGNNDVS 180

Query: 181 PNPDSTLTHPITSRQKSMRRNGSNSSYNSALSQQSAHSSPVIDPAPNSSSRDQTQRTAFI 240
           PNPDSTL HPITSRQKSMRRNGS++SYNS L QQSA SSPVID APN+SS+DQTQRT F+
Sbjct: 181 PNPDSTLAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNNSSKDQTQRTTFV 240

Query: 241 SSQSHNDHGHQQPRSSFRSRGGASHPRGDNSHHHNYSSRRDHDRGNQDWNSNRNFNAQPH 300
           SSQSHNDHGHQQPR+SFRSRGG SHPRGDNSHHHNY SRRDHDRGNQDWNSNRN+NAQPH
Sbjct: 241 SSQSHNDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPH 300

Query: 301 RVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPDFVPPVVYIGPPPPPPPPPPEALR 360
           RVVHRFIRP PPPPPNTTG+ISSPTMR IGGPLPFPDF PPVVYIG      PPPPEALR
Sbjct: 301 RVVHRFIRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIG------PPPPEALR 360

Query: 361 GVPFVAPIPPNAMFFHGPDPHLYAMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLI 420
           GVPFVAPI PNAMFFHGPDP LYAMIVSQIEYYFSGENL+KDTFLRQ M+E+GWVPV+LI
Sbjct: 361 GVPFVAPISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLI 420

Query: 421 ATFSKVKRLTENIQTILDALQSSTLVEVKGDKVRRRNDYDRWIIRPGQVPNIAAPLSPV- 480
           A+FSKV+RLTENIQTILDALQSST+VEVKGD VRRR+DYDRWIIRPGQVPNI+ PLSP+ 
Sbjct: 421 ASFSKVQRLTENIQTILDALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLS 480

Query: 481 --SSNQDMLAAGVQGIALENINHRDSEGGQGGVHV-EALHSSSPTGNLSMQAQPCGDDRP 540
             SSNQDMLA GVQGIALEN+NH+ SEGGQG VHV EA H                    
Sbjct: 481 PGSSNQDMLAGGVQGIALENVNHKVSEGGQGEVHVDEASH-------------------- 527

Query: 541 GQVNTKAGPDCSSAERS 548
           G  NTKAG + SS+ERS
Sbjct: 541 GDSNTKAGSEHSSSERS 527

BLAST of Cp4.1LG10g00070 vs. NCBI nr
Match: gi|700193740|gb|KGN48944.1| (hypothetical protein Csa_6G507180 [Cucumis sativus])

HSP 1 Score: 531.9 bits (1369), Expect = 1.3e-147
Identity = 282/359 (78.55%), Postives = 306/359 (85.24%), Query Frame = 1

Query: 192 MRRNGSNSSYNSALSQQSAHSSPVIDPAPNSSSRDQTQRTAFISSQSHNDHGHQQPRSSF 251
           MRRNGS++SYNS+L QQSA SSPVID APN+S +DQTQRT F+SSQSH+DHGHQQPR+S+
Sbjct: 1   MRRNGSSNSYNSSLPQQSAPSSPVIDTAPNNSPKDQTQRTTFVSSQSHSDHGHQQPRNSY 60

Query: 252 RSRGGASHPRGDNSHHHNYSSRRDHDRGNQDWNSNRNFNAQPHRVVHRFIRPPPPPPPNT 311
           RSRGG SHPRGDNSHHHNY SRRDHDRGNQDWNSNRN+NAQPHRVVHRFIRP PPPPPNT
Sbjct: 61  RSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPHRVVHRFIRPSPPPPPNT 120

Query: 312 TGFISSPTMRPIGGPLPFPDFVPPVVYIGPPPPPPPPPPEALRGVPFVAPIPPNAMFFHG 371
           TG+ISSPTMR IGGPLPFPDF PPVVYIG      PPPPEALRGVPFVAPI PNAMFFHG
Sbjct: 121 TGYISSPTMRAIGGPLPFPDFAPPVVYIG------PPPPEALRGVPFVAPISPNAMFFHG 180

Query: 372 PDPHLYAMIVSQIEYYFSGENLVKDTFLRQKMDEDGWVPVRLIATFSKVKRLTENIQTIL 431
           PDP LYAMIVSQIEYYFSGENL+KDTFLRQ M+E+GWVPV+LIA+FSKV+RLTENIQTIL
Sbjct: 181 PDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTENIQTIL 240

Query: 432 DALQSSTLVEVKGDKVRRRNDYDRWIIRPGQVPNIAAPLSPV---SSNQDMLAAGVQGIA 491
           DALQSST+VEVKGD VRRR+DYDRWIIRPGQVPNI+ PLSP+   SS QDMLAAGV+GIA
Sbjct: 241 DALQSSTVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLSPGSSKQDMLAAGVKGIA 300

Query: 492 LENINHRDSEGGQGGVHV-EALHSSSPTGNLSMQAQPCGDDRPGQVNTKAGPDCSSAER 547
           LENINHR SEGGQG VHV EA H                    G  NTKAG + SS+ER
Sbjct: 301 LENINHRVSEGGQGDVHVDEASH--------------------GDNNTKAGSEHSSSER 333

BLAST of Cp4.1LG10g00070 vs. NCBI nr
Match: gi|659080564|ref|XP_008440861.1| (PREDICTED: la-related protein 1C-like [Cucumis melo])

HSP 1 Score: 456.1 bits (1172), Expect = 8.9e-125
Identity = 321/576 (55.73%), Postives = 381/576 (66.15%), Query Frame = 1

Query: 1   MAASTLPDADSVTASSVDHSSRNSGQSNSSSPKSSSRRSGGRTVSSPWNQIVRGELDTAA 60
           MAA+ L D +   A+ V HS R+SGQ N SSPKS   R   R VSSPW QIVRGEL+  A
Sbjct: 1   MAATNLSDNNPAMATGVHHS-RHSGQ-NISSPKS---RRSPRPVSSPWTQIVRGELEIPA 60

Query: 61  AVSSSVSSTT----VVEP----VTFTSSSSATSEEPVG-ECYDGGNGSSANAGKKPVWNK 120
            V SS S+ T    +VEP     + + SSS T EEP G E  D GN S +NAG KP WNK
Sbjct: 61  VVPSSPSNVTSSAAIVEPRSPSPSSSPSSSLTVEEPAGAERSDSGNESLSNAGNKPAWNK 120

Query: 121 LANGT-EVGPVMGAVSWPALSESAKGTPKSSSDSIKSLGDGSAG--AQGIGTSSSSSNNE 180
           L+NG  EVGPVMGAVSWPALSES + T KSSSDS K   DGSAG   +G G   SS   +
Sbjct: 121 LSNGAVEVGPVMGAVSWPALSESTRFTNKSSSDSPKDSADGSAGPACEGTGNPPSSPYKK 180

Query: 181 GNN-------------DVSPNPDSTLTHPITSRQKSMRRNGSNSSYNSALSQQSAHSSPV 240
           G +              ++P P +T T   T RQKSM+R+G+ SSY+  +SQQSA S   
Sbjct: 181 GISASPSPNPTPAATPTLTPTPAATPTLTPTHRQKSMKRSGAASSYSGGVSQQSATSVST 240

Query: 241 IDPAP-NSSSRDQTQRTAFISSQSHNDHG--HQQPRSSFRSRGGASHPRGDNSHHHNYSS 300
           ID  P N SS+D  QR +F +SQSHNDH   HQ   +SFRSRG + +PRGD+SHHHN+ S
Sbjct: 241 IDTTPSNPSSKDHMQRNSF-ASQSHNDHNYQHQHQPNSFRSRG-SGYPRGDSSHHHNHGS 300

Query: 301 RRDHDRGNQDWNSNRNFNAQPHRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPDF 360
           RRD DRGN DWN +RN+  QP RVV R+IRPPPPP   T  FI S +MRP+GGP+PF +F
Sbjct: 301 RRDQDRGNHDWNPHRNY-GQPQRVVQRYIRPPPPPSNAT--FIPS-SMRPLGGPIPFHEF 360

Query: 361 VPPVVYIGPPPPPPPPPPEALRGVPFVAPIPPNAMFFHGPDPHLYAMIVSQIEYYFSGEN 420
           VPPVVY+        PP EALR VPFVAP+PPNA+FF   DP LYA IV QIEYYFS EN
Sbjct: 361 VPPVVYVA------APPQEALRSVPFVAPMPPNAVFFPASDPQLYARIVHQIEYYFSDEN 420

Query: 421 LVKDTFLRQKMDEDGWVPVRLIATFSKVKRLTENIQTILDALQS-STLVEVKGDKVRRRN 480
           LVKDT+LR+ MDEDGWVP+ L+A F  V+ LT+NI  ILDAL+S ST+VEV+GDKVRRRN
Sbjct: 421 LVKDTYLRRNMDEDGWVPIHLVAGFKMVRSLTDNIPVILDALRSTSTVVEVQGDKVRRRN 480

Query: 481 DYDRWIIRPG-QVPNIAAPLSPVSSNQDMLAAGVQGIALENINHRDSEGGQGGVHVEALH 540
           DY +WI+ P     N  APLSP +S+QD+LAAGVQ I LE  N  D    +G   VEAL 
Sbjct: 481 DYSKWIMLPSTPTSNDVAPLSPANSSQDLLAAGVQNITLETYNSTDV---RGDFKVEALQ 540

Query: 541 SSSPTGNLSMQAQPCGDDRPGQVNTKAGPDCSSAER 547
           S SP  N + Q+Q  G  +P   N  AG D S + R
Sbjct: 541 SRSPR-NFNSQSQLPGTGKP---NIGAGLDHSFSAR 552

BLAST of Cp4.1LG10g00070 vs. NCBI nr
Match: gi|802753370|ref|XP_012088476.1| (PREDICTED: la-related protein 1C-like isoform X1 [Jatropha curcas])

HSP 1 Score: 382.5 bits (981), Expect = 1.2e-102
Identity = 280/577 (48.53%), Postives = 355/577 (61.53%), Query Frame = 1

Query: 1   MAASTLPDADSVTASSVDHSSRNSGQSNSSSPKSSSRRSGGRTV-----SSPWNQIVRGE 60
           MA++      S T +  DHS R+S   N ++    SRR G R V     SSPW QI RGE
Sbjct: 1   MASTVNASISSSTPTINDHSPRHSLSENHNT----SRRGGSRVVPSPSTSSPWTQIFRGE 60

Query: 61  LDTAAAVSSSVSSTTVVEPVTFT-------SSSSATSEE--PVGECYDGGNGSSANAGKK 120
            D+ A + SS S+   +  V  T       SSSS T+    P GE  D  NG   NAGK+
Sbjct: 61  SDSIAVMPSSPSARDSIMAVALTEQPGVMVSSSSLTTSYLLPEGEGLDDSNG---NAGKR 120

Query: 121 PVWNKLANGT-EVGPVMGAVSWPALSESAKGTPKSSSDSIKSLGDGSAGA---QGIGTSS 180
           P W+K +NG  EVGPVMGAVSWPALSESA+ + K S DS K L DGS+     QG  + S
Sbjct: 121 PAWSKPSNGAVEVGPVMGAVSWPALSESARASGKPSQDSPKGLADGSSSVPVIQGPASPS 180

Query: 181 SSSNNEGNNDVSPNPDSTLTHPITSRQKSMRRNGSNSSYNSALSQQSAHSSPVIDP--AP 240
           SSS  + +N+ +PN  ST  H + +RQ+SM+RN +N+S N   SQ    S P+I    + 
Sbjct: 181 SSSQKQVSNNANPN--STPNHTVPARQRSMKRNSANTSSNGGTSQPPG-SQPLIGEVHSN 240

Query: 241 NSSSRDQTQRTAFISSQSHNDHGHQQPRSSFRSRGGASHPRGDNSHHHNYSSRRDHDRGN 300
           N S RD +QR +   S+S NDH  QQ R+SFR  GG  H RGD SHHHNY  RRD DR N
Sbjct: 241 NPSPRDHSQRNS--QSRSANDHPQQQ-RNSFRRNGGP-HSRGDGSHHHNYGGRRDQDRSN 300

Query: 301 QDWNSNRNFNAQ-PH----RVVHRFIR--PPPPPPPNTTGFISSPTMRPIGGPLPFPDFV 360
           QDW+S+RNFN + PH    RVV RF+R  PPPPPPP T  FI  P +R  G P+ F +  
Sbjct: 301 QDWSSHRNFNGRDPHMQQQRVVPRFMRHPPPPPPPPTTAPFIGPPPVRGFGSPIGFHELG 360

Query: 361 PPVVYIGPPPPPPPPPPEALRGVPFVA-PIPPNAMFFHGPDPHLYAMIVSQIEYYFSGEN 420
            PV Y+  PPP P      LRGVPFVA P+PP+AM+F  PD  L++ IV+QI+YYFS EN
Sbjct: 361 SPVYYVAGPPPDP------LRGVPFVAAPLPPHAMYFPAPDLQLHSKIVNQIDYYFSNEN 420

Query: 421 LVKDTFLRQKMDEDGWVPVRLIATFSKVKRLTENIQTILDALQSSTLVEVKGDKVRRRND 480
           L+KDTFLRQ MD+ GWVP++LIA F+KV  LT+N+Q ILDA+++ST+VEV+GDKVRRRND
Sbjct: 421 LIKDTFLRQNMDDQGWVPIKLIAGFNKVSHLTDNVQLILDAIRNSTVVEVQGDKVRRRND 480

Query: 481 YDRWIIRPG-QVPNIAAPLSPVSSNQDMLAAGVQGIALENINHRDSEG-GQGGVHVEALH 540
           + RWI+ P  Q PN++ P SP  S+ DMLAA V  I+LE      S G  Q   H EA  
Sbjct: 481 WMRWIMPPSVQFPNVSVPASPGRSSHDMLAAHVHSISLEETASSHSSGRSQADFHNEAFL 540

Query: 541 SSSPTGNLSMQAQPCGDDRPGQVNTKAGPDCSSAERS 548
             S   +++ Q      +  G V+ + G   S+  R+
Sbjct: 541 GRS-LSDVNSQLHISSAEGSGWVSVQGGSGASTLART 556

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LRP1C_ARATH1.4e-5038.24La-related protein 1C OS=Arabidopsis thaliana GN=LARP1C PE=1 SV=1[more]
LRP1B_ARATH9.1e-3735.06La-related protein 1B OS=Arabidopsis thaliana GN=LARP1B PE=1 SV=2[more]
LAR1B_HUMAN2.3e-1650.00La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2[more]
LRP1A_ARATH4.0e-1640.74La-related protein 1A OS=Arabidopsis thaliana GN=LARP1A PE=1 SV=1[more]
LARP1_HUMAN1.2e-1550.62La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0KJG2_CUCSA8.9e-14878.55Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507180 PE=4 SV=1[more]
A0A067FV98_CITSI2.8e-10150.96Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g039779mg PE=4 S... [more]
E0CU57_VITVI1.9e-9446.11Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0349g00060 PE=4 SV=... [more]
A0A061DF68_THECC6.9e-9246.99Winged-helix DNA-binding transcription factor family protein, putative OS=Theobr... [more]
M5VVT5_PRUPE2.0e-9144.64Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003845mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G35890.18.1e-5238.24 winged-helix DNA-binding transcription factor family protein[more]
AT5G66100.15.1e-3835.06 winged-helix DNA-binding transcription factor family protein[more]
AT5G21160.32.2e-1740.74 LA RNA-binding protein[more]
AT5G46250.11.0e-0943.90 RNA-binding protein[more]
Match NameE-valueIdentityDescription
gi|449434124|ref|XP_004134846.1|6.6e-22980.58PREDICTED: la-related protein 1C [Cucumis sativus][more]
gi|659080562|ref|XP_008440860.1|9.5e-22879.89PREDICTED: la-related protein 1C [Cucumis melo][more]
gi|700193740|gb|KGN48944.1|1.3e-14778.55hypothetical protein Csa_6G507180 [Cucumis sativus][more]
gi|659080564|ref|XP_008440861.1|8.9e-12555.73PREDICTED: la-related protein 1C-like [Cucumis melo][more]
gi|802753370|ref|XP_012088476.1|1.2e-10248.53PREDICTED: la-related protein 1C-like isoform X1 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011991Winged helix-turn-helix DNA-binding domain
IPR006630La_HTH
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0044424 intracellular part
molecular_function GO:0003674 molecular_function
molecular_function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g00070.1Cp4.1LG10g00070.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006630RNA-binding protein Lupus LaPFAMPF05383Lacoord: 380..435
score: 7.6
IPR006630RNA-binding protein Lupus LaSMARTSM00715lacoord: 374..450
score: 1.0
IPR006630RNA-binding protein Lupus LaPROFILEPS50961HTH_LAcoord: 370..459
score: 26
IPR011991Winged helix-turn-helix DNA-binding domainGENE3DG3DSA:1.10.10.10coord: 373..452
score: 2.5
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 368..458
score: 9.98
NoneNo IPR availablePANTHERPTHR22792LUPUS LA PROTEIN-RELATEDcoord: 42..74
score: 2.0E-134coord: 99..460
score: 2.0E
NoneNo IPR availablePANTHERPTHR22792:SF59LA-RELATED PROTEIN 1B-RELATEDcoord: 42..74
score: 2.0E-134coord: 99..460
score: 2.0E

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g00070Cucsa.043850Cucumber (Gy14) v1cgycpeB0033
Cp4.1LG10g00070Cucsa.322820Cucumber (Gy14) v1cgycpeB0843
Cp4.1LG10g00070Cucsa.343170Cucumber (Gy14) v1cgycpeB0876
Cp4.1LG10g00070CmaCh07G004100Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g00070CmaCh03G006620Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g00070CmoCh03G006900Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g00070CmoCh01G020430Cucurbita moschata (Rifu)cmocpeB419
Cp4.1LG10g00070CmoCh07G004050Cucurbita moschata (Rifu)cmocpeB806
Cp4.1LG10g00070Cla014311Watermelon (97103) v1cpewmB073
Cp4.1LG10g00070Csa3G873810Cucumber (Chinese Long) v2cpecuB065
Cp4.1LG10g00070Csa6G507180Cucumber (Chinese Long) v2cpecuB085
Cp4.1LG10g00070MELO3C007932Melon (DHL92) v3.5.1cpemeB060
Cp4.1LG10g00070ClCG01G020520Watermelon (Charleston Gray)cpewcgB061
Cp4.1LG10g00070CSPI03G43570Wild cucumber (PI 183967)cpecpiB061
Cp4.1LG10g00070CSPI06G32050Wild cucumber (PI 183967)cpecpiB080
Cp4.1LG10g00070Lsi04G017660Bottle gourd (USVL1VR-Ls)cpelsiB065
Cp4.1LG10g00070Lsi01G005730Bottle gourd (USVL1VR-Ls)cpelsiB054
Cp4.1LG10g00070MELO3C007932.2Melon (DHL92) v3.6.1cpemedB080
Cp4.1LG10g00070CsaV3_6G047400Cucumber (Chinese Long) v3cpecucB0092
Cp4.1LG10g00070CsaV3_3G046030Cucumber (Chinese Long) v3cpecucB0071
Cp4.1LG10g00070Bhi03G000611Wax gourdcpewgoB0097
Cp4.1LG10g00070CsGy6G031590Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g00070Carg07939Silver-seed gourdcarcpeB0913
Cp4.1LG10g00070Carg00570Silver-seed gourdcarcpeB0554
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG10g00070Cp4.1LG19g08640Cucurbita pepo (Zucchini)cpecpeB076
Cp4.1LG10g00070Cp4.1LG02g08190Cucurbita pepo (Zucchini)cpecpeB091