Carg05937 (gene) Silver-seed gourd

NameCarg05937
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontranscription elongation factor TFIIS
LocationCucurbita_argyrosperma_scaffold_026 : 358626 .. 360503 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATACCTCATCTCCTAGGCCTCGTTTCAATTTCTTTACTCTCTCCGCCGTCTCTCTGCCGAAAAAGGGATTTTTCCAAAGCCGATCCCGATTTATTTTCCGTTGTTGTTTTTGATTTCTTCTATTAAGTGTGGTATTGCGAGCGTTTTTGCAGTCGGCGATTCAGATCTCTGTAAGTGTTACTTATTCGAAATCGATCAATTGCCATCGGCAATGCGTTTTCTTTTGATTTGATTGTATCTTTTTGCTTGTTCATTGAGAAAAGAACTCGAATTCGATATTGATTCCAATACCCCCTGCATGCGTCGTTTTTCTCATTCCGTTGTGTTGTTGGGATCTTATCGTTCTTGGAATGTGGTCGTTAGGTTCCATCAAAATTCTTCGTTGGCGGTGATTCGATGGAGAAAGAGCTGGTCGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGACGCCGCTGCAGCACGATCAAATGATGGGGGAGCCGAGGAAAGTCGTTGTCTTGATGCCCTACGGCAGCTCAAGAAATTTCCTGTTACATATCAAATCCTTGTTTCCACTCAGGTTTTCTTCTCACTATACTTGAAATCTGTTTCTTTTGTTGATGGTGGATGGATACTCAAAATGTAAACAGCCGGTTAGTTTATAAAATCGTACATGGTTTTTGATATGGACTAAGCCTAAATTCCTTGTTTGATCGTCAACGAATTGGTTTCATAACGAGCTGCGTTACTCTGTTTCATCTGTTATTTACGTTGTTCATAACGGAATCAACTCATTGCAAGTTTTTGGAACAATAATACTGGAGTCATAGCTCTTGTTATATATTGTTTTCTGGATTTTTTTTTTTCAATCCCTTTTCCTTTGTAATTGAGGTCCATTTTCATGCGTTGCTCAAGATTCTATATCTTGCCTTCCATAGGTTGGGAAGCGCCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAAGACTATGCTTCTGACTTGATTGAGATGTGGAAGGATATAGTAATCAAGGAGACTAACAAGAATAAAAAGAATGGAAACGGCGACAGTAAAGAACCATCCAAAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTGGAGAACTTGCAAAAATCATCTTCCATGAAGGCTGAGAGAGTTTCCAAGGTTGAGCAATTCGATAGGAATGGTTCCACAAGCTCTGTTAAATTTTCCAGATCGGCGAGTGCGGTCTCGGAGAAGAACTCTGTTAAGGTTGAAAAAACTGATTCAGTGGTCAAGGTGGAAAGGATAGTTAAAGAAGAGAAGAAAATCTCTATTGAAAAGAAACCAAGCGGAGCCGCTGGACCTCCAAAGCTTACTTCCATGATCAAATCAAAAGATGCTGCTCGGGACAAAATAAGAGAACTTCTCGTTGAGGCCTTCTCCAAGGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTAAATGCAAGCGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTTGAAAATTGGGGAGGTTCTACTGGGGCACAGAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCAAAGAACCCAGATTTTCGGAGAAAAGTTCTTCTTGGGCTTATCAAGCCAGAAAGGATGACCAACTTGAGCACAACTGATATGGCAAGTGATCAGAGAAAACGTGAAAACGAAGAGATTGCACAAAAAGCACTATTCGAATGTGAGCGAGGAGGAGCTCCAAAAGCTACCACCGATCAATTCAAATGTGGTCGATGCGGTCAACGCAAGACGACCTACTATCAATTGCAGACCCGGAGTGCTGATGAACCTATGACAACGTTTGTAACTTGTGTAAACTGCAATAATCATTGGAAGTTCTGT

mRNA sequence

TTATACCTCATCTCCTAGGCCTCGTTTCAATTTCTTTACTCTCTCCGCCGTCTCTCTGCCGAAAAAGGGATTTTTCCAAAGCCGATCCCGATTTATTTTCCGTTGTTGTTTTTGATTTCTTCTATTAAGTGTGGTATTGCGAGCGTTTTTGCAGTCGGCGATTCAGATCTCTGTTCCATCAAAATTCTTCGTTGGCGGTGATTCGATGGAGAAAGAGCTGGTCGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGACGCCGCTGCAGCACGATCAAATGATGGGGGAGCCGAGGAAAGTCGTTGTCTTGATGCCCTACGGCAGCTCAAGAAATTTCCTGTTACATATCAAATCCTTGTTTCCACTCAGGTTGGGAAGCGCCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAAGACTATGCTTCTGACTTGATTGAGATGTGGAAGGATATAGTAATCAAGGAGACTAACAAGAATAAAAAGAATGGAAACGGCGACAGTAAAGAACCATCCAAAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTGGAGAACTTGCAAAAATCATCTTCCATGAAGGCTGAGAGAGTTTCCAAGGTTGAGCAATTCGATAGGAATGGTTCCACAAGCTCTGTTAAATTTTCCAGATCGGCGAGTGCGGTCTCGGAGAAGAACTCTGTTAAGGTTGAAAAAACTGATTCAGTGGTCAAGGTGGAAAGGATAGTTAAAGAAGAGAAGAAAATCTCTATTGAAAAGAAACCAAGCGGAGCCGCTGGACCTCCAAAGCTTACTTCCATGATCAAATCAAAAGATGCTGCTCGGGACAAAATAAGAGAACTTCTCGTTGAGGCCTTCTCCAAGGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTAAATGCAAGCGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTTGAAAATTGGGGAGGTTCTACTGGGGCACAGAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCAAAGAACCCAGATTTTCGGAGAAAAGTTCTTCTTGGGCTTATCAAGCCAGAAAGGATGACCAACTTGAGCACAACTGATATGGCAAGTGATCAGAGAAAACGTGAAAACGAAGAGATTGCACAAAAAGCACTATTCGAATGTGAGCGAGGAGGAGCTCCAAAAGCTACCACCGATCAATTCAAATGTGGTCGATGCGGTCAACGCAAGACGACCTACTATCAATTGCAGACCCGGAGTGCTGATGAACCTATGACAACGTTTGTAACTTGTGTAAACTGCAATAATCATTGGAAGTTCTGT

Coding sequence (CDS)

ATGGAGAAAGAGCTGGTCGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGACGCCGCTGCAGCACGATCAAATGATGGGGGAGCCGAGGAAAGTCGTTGTCTTGATGCCCTACGGCAGCTCAAGAAATTTCCTGTTACATATCAAATCCTTGTTTCCACTCAGGTTGGGAAGCGCCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAAGACTATGCTTCTGACTTGATTGAGATGTGGAAGGATATAGTAATCAAGGAGACTAACAAGAATAAAAAGAATGGAAACGGCGACAGTAAAGAACCATCCAAAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTGGAGAACTTGCAAAAATCATCTTCCATGAAGGCTGAGAGAGTTTCCAAGGTTGAGCAATTCGATAGGAATGGTTCCACAAGCTCTGTTAAATTTTCCAGATCGGCGAGTGCGGTCTCGGAGAAGAACTCTGTTAAGGTTGAAAAAACTGATTCAGTGGTCAAGGTGGAAAGGATAGTTAAAGAAGAGAAGAAAATCTCTATTGAAAAGAAACCAAGCGGAGCCGCTGGACCTCCAAAGCTTACTTCCATGATCAAATCAAAAGATGCTGCTCGGGACAAAATAAGAGAACTTCTCGTTGAGGCCTTCTCCAAGGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTAAATGCAAGCGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTTGAAAATTGGGGAGGTTCTACTGGGGCACAGAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCAAAGAACCCAGATTTTCGGAGAAAAGTTCTTCTTGGGCTTATCAAGCCAGAAAGGATGACCAACTTGAGCACAACTGATATGGCAAGTGATCAGAGAAAACGTGAAAACGAAGAGATTGCACAAAAAGCACTATTCGAATGTGAGCGAGGAGGAGCTCCAAAAGCTACCACCGATCAATTCAAATGTGGTCGATGCGGTCAACGCAAGACGACCTACTATCAATTGCAGACCCGGAGTGCTGATGAACCTATGACAACGTTTGTAACTTGTGTAAACTGCAATAATCATTGGAAGTTCTGT

Protein sequence

MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQKSSSMKAERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKKISIEKKPSGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC
BLAST of Carg05937 vs. NCBI nr
Match: XP_022957122.1 (transcription elongation factor TFIIS-like [Cucurbita moschata])

HSP 1 Score: 620.9 bits (1600), Expect = 2.8e-174
Identity = 370/374 (98.93%), Postives = 372/374 (99.47%), Query Frame = 0

Query: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQ 120
           HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNG+SKEPSKIGSPSAESVKVENLQ
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 120

Query: 121 KSSSMKAERVSKVEQFDRNGSTSSVKFSRSASAVSEKXXXXXXXXXXXXXXXXXXXXXXX 180
           KSSSMK ERVSKVEQFDRNGSTSSVKFSRSASAVSE XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 240
           XXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDV+DEVNASDPIR
Sbjct: 181 XXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVIDEVNASDPIR 240

Query: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300
           VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD
Sbjct: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300

Query: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTT 360
           MASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTT 360

Query: 361 FVTCVNCNNHWKFC 375
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 374

BLAST of Carg05937 vs. NCBI nr
Match: XP_023531955.1 (transcription elongation factor TFIIS-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 615.5 bits (1586), Expect = 1.2e-172
Identity = 368/374 (98.40%), Postives = 370/374 (98.93%), Query Frame = 0

Query: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MEKELVELFEAAKKAADAAAA SNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MEKELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQ 120
           HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNG+SKE SKIGSPSAESVKVENLQ
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKETSKIGSPSAESVKVENLQ 120

Query: 121 KSSSMKAERVSKVEQFDRNGSTSSVKFSRSASAVSEKXXXXXXXXXXXXXXXXXXXXXXX 180
           KSSSMK ERVSKVEQFDRNGSTSSVK+SRSASAVSE XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 KSSSMKVERVSKVEQFDRNGSTSSVKYSRSASAVSEXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 240
           XXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR
Sbjct: 181 XXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 240

Query: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300
           VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD
Sbjct: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300

Query: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTT 360
           MASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTT 360

Query: 361 FVTCVNCNNHWKFC 375
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 374

BLAST of Carg05937 vs. NCBI nr
Match: XP_008456781.1 (PREDICTED: transcription elongation factor TFIIS [Cucumis melo])

HSP 1 Score: 575.5 bits (1482), Expect = 1.3e-160
Identity = 335/374 (89.57%), Postives = 346/374 (92.51%), Query Frame = 0

Query: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           ME ELVELFEAAKKAADAAAA SNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQ 120
           HLTKHPKKKIQ++ASDLIEMWK+IVIKETNKNKKNGN  SK+  KIGSPS ESVKVE  Q
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120

Query: 121 KSSSMKAERVSKVEQFDRNGSTSSVKFSRSASAVSEKXXXXXXXXXXXXXXXXXXXXXXX 180
           KSSSMK ERVSKVEQFDRNG+TSSVK+SRS SAVS     XXXXXXXXXXXXXXXXXXXX
Sbjct: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVS-----XXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 240
           XXXXXXXXGAA PPKLTSM+KSKDAARDKIRELL EAFSKVPGEADEDVMDEVNASDPIR
Sbjct: 181 XXXXXXXXGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIR 240

Query: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300
           VA+SVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERM N++T D
Sbjct: 241 VAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTAD 300

Query: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTT 360
           MASDQRKRENEEIAQKALF+CERGGAPKATTDQFK        TTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360

Query: 361 FVTCVNCNNHWKFC 375
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 369

BLAST of Carg05937 vs. NCBI nr
Match: XP_022134049.1 (transcription elongation factor TFIIS [Momordica charantia] >XP_022134050.1 transcription elongation factor TFIIS [Momordica charantia])

HSP 1 Score: 568.9 bits (1465), Expect = 1.2e-158
Identity = 332/377 (88.06%), Postives = 344/377 (91.25%), Query Frame = 0

Query: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           ME ELVELFEAAKKAADAAAA SNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQ 120
           HLTKHPKKKIQDYASDLIEMWK+IVIKETNKNKKNGNG+ KE  KIGSPSAESVKVE  Q
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKEIVIKETNKNKKNGNGNCKESPKIGSPSAESVKVEKFQ 120

Query: 121 KSSSMKAERVSKVEQFDRNGSTSSVKFSRSASAVSEK---XXXXXXXXXXXXXXXXXXXX 180
           KSSSMK ERVSKVEQ DRNG+TSSVK+SRS S +SEK    XXXXXXXXXXXXXXXXXXX
Sbjct: 121 KSSSMKVERVSKVEQSDRNGTTSSVKYSRSESVISEKNIVKXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASD 240
           XXXXXXXXX  G A PPKLTSMIKSKDAARDKIRELL EAFSKVPGEADEDV+DEVNASD
Sbjct: 181 XXXXXXXXXSSGTAAPPKLTSMIKSKDAARDKIRELLCEAFSKVPGEADEDVIDEVNASD 240

Query: 241 PIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLS 300
           P+RVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRR VL+G IKPER+ N+S
Sbjct: 241 PVRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRNVLVGHIKPERLINMS 300

Query: 301 TTDMASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEP 360
           T +MASDQRKRENEEI QKALF+CERGGAPKATTDQFK        TTYYQLQTRSADEP
Sbjct: 301 TAEMASDQRKRENEEIEQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEP 360

Query: 361 MTTFVTCVNCNNHWKFC 375
           MTTFVTCVNCNNHWKFC
Sbjct: 361 MTTFVTCVNCNNHWKFC 377

BLAST of Carg05937 vs. NCBI nr
Match: XP_022989946.1 (transcription elongation factor TFIIS-like [Cucurbita maxima])

HSP 1 Score: 557.0 bits (1434), Expect = 4.9e-155
Identity = 341/374 (91.18%), Postives = 343/374 (91.71%), Query Frame = 0

Query: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MEKELVELFEAAKKAADAAAA SNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MEKELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQ 120
           HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNG+SKEPSKIGSPSAESVKVEN Q
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENFQ 120

Query: 121 KSSSMKAERVSKVEQFDRNGSTSSVKFSRSASAVSEKXXXXXXXXXXXXXXXXXXXXXXX 180
           KSSSMK ERV                           XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 KSSSMKVERVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 240
           XXXXXXXX AAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDV+DEVNASDPIR
Sbjct: 181 XXXXXXXXXAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVIDEVNASDPIR 240

Query: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300
           VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD
Sbjct: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300

Query: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTT 360
           MASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTT 360

Query: 361 FVTCVNCNNHWKFC 375
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 374

BLAST of Carg05937 vs. TAIR10
Match: AT2G38560.1 (transcript elongation factor IIS)

HSP 1 Score: 338.6 bits (867), Expect = 5.0e-93
Identity = 209/381 (54.86%), Postives = 254/381 (66.67%), Query Frame = 0

Query: 1   MEKELVELFEAAKKAADAAAARS-NDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRL 60
           ME +L++LFE AKKAADAAA       G E S+C+DAL+QLKKFPVTY  LV+TQVGK+L
Sbjct: 1   MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60

Query: 61  RHLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAES------ 120
           R L KHP + I+  A+DL+E+WK +VI+ET K KK    +  + +K+     E       
Sbjct: 61  RSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPAP 120

Query: 121 VKVENLQKSSSMKAERVSKVEQFDRNGSTSSVKFSRSASAVSEKXXXXXXXXXXXXXXXX 180
           VKV+ LQ+  S K+    KVE+ + +                  XXXXXXXXXXXXXX  
Sbjct: 121 VKVQKLQRGDSAKS---IKVERKEPDNKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXDE 180

Query: 181 XXXXXXXXXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEV 240
                           A  PPKLT+M+K  D  RDKIRELLVEA  +V GEAD+   + V
Sbjct: 181 KVSKDNQSSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDYERESV 240

Query: 241 NASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERM 300
           NASDP+RVAVSVES+MFE  G STGAQK KYRSIMFNL+D  NPD RR+VL G I PE++
Sbjct: 241 NASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKL 300

Query: 301 TNLSTTDMASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRS 360
             LS  DMASD+RK+EN +I +KALF+CERG A KA+TDQFK         TYYQ+QTRS
Sbjct: 301 ITLSAEDMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRS 360

Query: 361 ADEPMTTFVTCVNCNNHWKFC 375
           ADEPMTT+VTCVNC+NHWKFC
Sbjct: 361 ADEPMTTYVTCVNCDNHWKFC 378

BLAST of Carg05937 vs. TAIR10
Match: AT2G42730.1 (F-box family protein)

HSP 1 Score: 102.8 bits (255), Expect = 4.6e-22
Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0

Query: 194 PKLTSMIKSKDAARDKIRELLVEAFSKVPGE-ADEDVMDEVNASDPIRVAVSVESVMFEN 253
           P  ++M K+ D+ RDK+RE+L  +  KV  E  D ++   V A DP  VAVSVES MFE 
Sbjct: 594 PTHSTMKKTGDSKRDKVREILQTSLVKVASEIVDTEMKTRVTACDPSVVAVSVESAMFEK 653

Query: 254 WGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMASDQRKRENEE 313
            G   G  KAKYRSI+FN+ D  NPD RRKVL+G I  ER+  +   +M S++ ++E + 
Sbjct: 654 LGCFMGPHKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQEMGSEKIQKEVQR 713

Query: 314 IAQKALFECE 323
           I + A F+ E
Sbjct: 714 IKENARFKEE 723

BLAST of Carg05937 vs. TAIR10
Match: AT4G18720.1 (Transcription factor IIS protein)

HSP 1 Score: 100.1 bits (248), Expect = 3.0e-21
Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = 0

Query: 194 PKLTSMIKSKDAARDKIRELLVEAFSKVPGE-ADEDVMDEVNASDPIRVAVSVESVMFEN 253
           P   +M K+ D+ RDK+RE+L  + +KV  E  D ++   V A DP  VAVSVE+ MFEN
Sbjct: 105 PTHATMKKTGDSKRDKVREILQTSLAKVASEVVDTEMKTRVTACDPWVVAVSVETAMFEN 164

Query: 254 WGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMAS 304
            G   G QKAKYRSI+FN+ D  NPD RRKVLLG I  ER+  +   +M S
Sbjct: 165 LGCFMGPQKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEKEEMGS 215

BLAST of Carg05937 vs. TAIR10
Match: AT5G42325.1 (Transcription factor IIS protein)

HSP 1 Score: 70.5 bits (171), Expect = 2.5e-12
Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 0

Query: 194 PKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDE--VNASDPIRVAVSVESVMFE 253
           P  ++M K+ D+ RDK+ E+L  + +KV  E  +  M    +   DP  VAVSVES M  
Sbjct: 104 PTHSTMKKTGDSKRDKVHEILQSSLAKVATEVVDTEMKRRVMTVCDPWVVAVSVESAM-- 163

Query: 254 NWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMASDQRKRENE 313
                         SI+FN+ D  NPD RRKVL+G I  ER+  +   +M S++ ++E +
Sbjct: 164 --------------SILFNMGDSNNPDLRRKVLIGEISGERLVKMEKDEMGSEKIQKEVQ 218

Query: 314 EIAQKALFECE 323
            I ++A F+ E
Sbjct: 224 RIKERARFKEE 218

BLAST of Carg05937 vs. TAIR10
Match: AT5G25520.2 (SPOC domain / Transcription elongation factor S-II protein)

HSP 1 Score: 60.5 bits (145), Expect = 2.6e-09
Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 0

Query: 237 DPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNL 296
           DP  +A  +E  +F+ +GG     K K RS++FNLKD  NP+ R  V+ G I PER+ N+
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418

Query: 297 STTDMASDQ----RKRENEEIAQ 316
           +  ++AS +    R+ + EE+A+
Sbjct: 419 TAEELASKELSQWRQAKAEEMAE 441

BLAST of Carg05937 vs. Swiss-Prot
Match: sp|Q9ZVH8|RDO2_ARATH (Transcription elongation factor TFIIS OS=Arabidopsis thaliana OX=3702 GN=TFIIS PE=1 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 9.0e-92
Identity = 209/381 (54.86%), Postives = 254/381 (66.67%), Query Frame = 0

Query: 1   MEKELVELFEAAKKAADAAAARS-NDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRL 60
           ME +L++LFE AKKAADAAA       G E S+C+DAL+QLKKFPVTY  LV+TQVGK+L
Sbjct: 1   MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60

Query: 61  RHLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAES------ 120
           R L KHP + I+  A+DL+E+WK +VI+ET K KK    +  + +K+     E       
Sbjct: 61  RSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPAP 120

Query: 121 VKVENLQKSSSMKAERVSKVEQFDRNGSTSSVKFSRSASAVSEKXXXXXXXXXXXXXXXX 180
           VKV+ LQ+  S K+    KVE+ + +                  XXXXXXXXXXXXXX  
Sbjct: 121 VKVQKLQRGDSAKS---IKVERKEPDNKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXDE 180

Query: 181 XXXXXXXXXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEV 240
                           A  PPKLT+M+K  D  RDKIRELLVEA  +V GEAD+   + V
Sbjct: 181 KVSKDNQSSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDYERESV 240

Query: 241 NASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERM 300
           NASDP+RVAVSVES+MFE  G STGAQK KYRSIMFNL+D  NPD RR+VL G I PE++
Sbjct: 241 NASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKL 300

Query: 301 TNLSTTDMASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRS 360
             LS  DMASD+RK+EN +I +KALF+CERG A KA+TDQFK         TYYQ+QTRS
Sbjct: 301 ITLSAEDMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRS 360

Query: 361 ADEPMTTFVTCVNCNNHWKFC 375
           ADEPMTT+VTCVNC+NHWKFC
Sbjct: 361 ADEPMTTYVTCVNCDNHWKFC 378

BLAST of Carg05937 vs. Swiss-Prot
Match: sp|Q15560|TCEA2_HUMAN (Transcription elongation factor A protein 2 OS=Homo sapiens OX=9606 GN=TCEA2 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.0e-23
Identity = 98/369 (26.56%), Postives = 153/369 (41.46%), Query Frame = 0

Query: 7   ELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHP 66
           E+   A++       +S +G       +D LR+LK  P+T  +L ST+VG  +  L K  
Sbjct: 7   EIARIARRLDKMVTKKSAEG------AMDLLRELKAMPITLHLLQSTRVGMSVNALRKQS 66

Query: 67  K-KKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQKSSSM 126
             +++   A  LI+ WK ++     K ++ G G    P    S  A      + ++    
Sbjct: 67  SDEEVIALAKSLIKSWKKLLDASDAKARERGRG---MPLPTSSRDASEAPDPSRKRPELP 126

Query: 127 KAERVSKVEQFDRNGSTSSVKFSRSASAVSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           +A    ++  F                                                 
Sbjct: 127 RAPSTPRITTF------------------------------------------------- 186

Query: 187 XXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIRVAVSV 246
                  PP   +     DA R+K RE+L  A      + D D +     +D  R++  +
Sbjct: 187 -------PPVPVTC----DAVRNKCREMLTAAL-----QTDHDHV--AIGADCERLSAQI 246

Query: 247 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMASDQ 306
           E  +F + G +    K + RS + NLKD KNPD RR VL G I P+++  +++ +MASD+
Sbjct: 247 EECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDE 299

Query: 307 RKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTTFVTCV 366
            K   + + ++A+ E +        TD F          TY Q+QTRS+DEPMTTFV C 
Sbjct: 307 LKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCN 299

Query: 367 NCNNHWKFC 375
            C N WKFC
Sbjct: 367 ECGNRWKFC 299

BLAST of Carg05937 vs. Swiss-Prot
Match: sp|P20232|TFS2_DROME (Transcription elongation factor S-II OS=Drosophila melanogaster OX=7227 GN=TfIIS PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.4e-22
Identity = 61/171 (35.67%), Postives = 87/171 (50.88%), Query Frame = 0

Query: 204 DAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIRVAVSVESVMFENWGGSTGAQKAK 263
           DA R K RE+L  A     GE  E         +P  +A  +E  ++  +  +    K +
Sbjct: 151 DAVRIKCREMLATALK--IGEVPE------GCGEPEEMAAELEDAIYSEFNNTDMKYKNR 210

Query: 264 YRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMASDQRKRENEEIAQKALFECER 323
            RS + NLKDPKNP  R   + G +  +++  ++  +MASD+ K+  E+  ++A+ + + 
Sbjct: 211 IRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQL 270

Query: 324 GGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 375
                  TD  K         TY QLQTRSADEPMTTFV C  C N WKFC
Sbjct: 271 ATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313

BLAST of Carg05937 vs. Swiss-Prot
Match: sp|Q9QVN7|TCEA2_MOUSE (Transcription elongation factor A protein 2 OS=Mus musculus OX=10090 GN=Tcea2 PE=2 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 5.7e-22
Identity = 102/363 (28.10%), Postives = 152/363 (41.87%), Query Frame = 0

Query: 17  DAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHPK-KKIQDYAS 76
           D    R N  GA     +D LR+LK  P+T  +L ST+VG  +  L K    +++   A 
Sbjct: 15  DKMVTRKNAEGA-----MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAK 74

Query: 77  DLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQKSSSMKAERVSKVEQ 136
            LI+ WK ++     K++  G G                    L  SSS  A R + +  
Sbjct: 75  SLIKSWKKLLDVSDGKSRNQGRGTP------------------LPTSSSKDASRTTDL-- 134

Query: 137 FDRNGSTSSVKFSRSASAVSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGPPK 196
                S       R+ S                                         P+
Sbjct: 135 -----SCKKPDPPRTPST----------------------------------------PR 194

Query: 197 LTSMIK---SKDAARDKIRELLVEAFSKVPGEADED-VMDEVNASDPIRVAVSVESVMFE 256
           +T+  +   + DA R+K RE+L  A      + D D V   VN      ++  +E  +F 
Sbjct: 195 ITTFPQVPITCDAVRNKCREMLTLAL-----QTDHDHVAVGVNCE---HLSSQIEECIFL 254

Query: 257 NWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMASDQRKRENE 316
           + G +    K + RS + NLKD KNP  RR VL G I P+++  +++ +MASD+ K   +
Sbjct: 255 DVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRK 299

Query: 317 EIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTTFVTCVNCNNHW 375
            + ++A+ E +        TD F          TY Q+QTRS+DEPMTT+V C  C N W
Sbjct: 315 AMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRW 299

BLAST of Carg05937 vs. Swiss-Prot
Match: sp|Q148K0|TCEA2_BOVIN (Transcription elongation factor A protein 2 OS=Bos taurus OX=9913 GN=TCEA2 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.8e-22
Identity = 112/369 (30.35%), Postives = 160/369 (43.36%), Query Frame = 0

Query: 7   ELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHP 66
           E+   A++       +S +G       +D LR+LK  PVT  +L ST+VG  +  L K  
Sbjct: 7   EIARIARRLDKMVTKKSAEG------AMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQS 66

Query: 67  K-KKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQKSSSM 126
             +++   A  LI+ WK ++                         A   K    ++  S+
Sbjct: 67  SDEEVVTLAKSLIKSWKKLL------------------------DASDAKARERRRGGSL 126

Query: 127 KAERVSKVEQFDRNGSTSSVKFSRSASAVSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
                           TSS K +  A   S K                   X XXXXXXX
Sbjct: 127 ---------------PTSSSKEASEAQDPSRK-------------------XPXXXXXXX 186

Query: 187 XXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIRVAVSV 246
           XXX    PP   +     DA R K RE+L  A      + D D +     +D   +A  +
Sbjct: 187 XXXXTTFPPVPVTC----DAVRTKCREMLTAAL-----QTDHDHV--AIGADCECLAGQI 246

Query: 247 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMASDQ 306
           E  +F + G +    K + RS + NLKD KNP  RRKVL G I P+++  +++ +MASD+
Sbjct: 247 EECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDE 300

Query: 307 RKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTTFVTCV 366
            K   + + ++A+ E +        TD F          TY Q+QTRS+DEPMTTFV C 
Sbjct: 307 LKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCN 300

Query: 367 NCNNHWKFC 375
            C N WKFC
Sbjct: 367 ECGNRWKFC 300

BLAST of Carg05937 vs. TrEMBL
Match: tr|A0A1S3C448|A0A1S3C448_CUCME (transcription elongation factor TFIIS OS=Cucumis melo OX=3656 GN=LOC103496629 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 8.8e-161
Identity = 335/374 (89.57%), Postives = 346/374 (92.51%), Query Frame = 0

Query: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           ME ELVELFEAAKKAADAAAA SNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQ 120
           HLTKHPKKKIQ++ASDLIEMWK+IVIKETNKNKKNGN  SK+  KIGSPS ESVKVE  Q
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120

Query: 121 KSSSMKAERVSKVEQFDRNGSTSSVKFSRSASAVSEKXXXXXXXXXXXXXXXXXXXXXXX 180
           KSSSMK ERVSKVEQFDRNG+TSSVK+SRS SAVS     XXXXXXXXXXXXXXXXXXXX
Sbjct: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVS-----XXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 240
           XXXXXXXXGAA PPKLTSM+KSKDAARDKIRELL EAFSKVPGEADEDVMDEVNASDPIR
Sbjct: 181 XXXXXXXXGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIR 240

Query: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300
           VA+SVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERM N++T D
Sbjct: 241 VAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTAD 300

Query: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTT 360
           MASDQRKRENEEIAQKALF+CERGGAPKATTDQFK        TTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360

Query: 361 FVTCVNCNNHWKFC 375
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 369

BLAST of Carg05937 vs. TrEMBL
Match: tr|A0A0A0KDH9|A0A0A0KDH9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014610 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 7.7e-149
Identity = 322/374 (86.10%), Postives = 329/374 (87.97%), Query Frame = 0

Query: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           ME ELVELFEAAKKAADAAAA SNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQ 120
           HLTKHPKKKIQ++ASDLIEMWK+IVIKETNKNKKNGN  SK+  KIGSPSAESVKVE  Q
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQ 120

Query: 121 KSSSMKAERVSKVEQFDRNGSTSSVKFSRSASAVSEKXXXXXXXXXXXXXXXXXXXXXXX 180
           KSSSMK ERVSKVEQFD                    XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 KSSSMKVERVSKVEQFD-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 240
           XXXXXXXX    PPKLTSMIKSKDAARDKIRELL EAFSKVPGEADE+ MDEVNASDPIR
Sbjct: 181 XXXXXXXXXXXAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIR 240

Query: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300
           VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERM N+ST D
Sbjct: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTAD 300

Query: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTT 360
           MASDQRKRENEEIAQKALF+CERGGAPKATTDQFK        TTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360

Query: 361 FVTCVNCNNHWKFC 375
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 369

BLAST of Carg05937 vs. TrEMBL
Match: tr|A0A2I4ER36|A0A2I4ER36_9ROSI (transcription elongation factor TFIIS-like OS=Juglans regia OX=51240 GN=LOC108991895 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.7e-111
Identity = 230/383 (60.05%), Postives = 269/383 (70.23%), Query Frame = 0

Query: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           ME+ELVELFEAAKKAA AAA  S DGGAEE RCLDAL QLK FPVTY +LVSTQVGK LR
Sbjct: 1   MERELVELFEAAKKAAGAAA--SADGGAEEIRCLDALHQLKNFPVTYHLLVSTQVGKHLR 60

Query: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQ 120
           HLT+HP+KKIQ +ASDLIE+WKDIVIKETNKN++N + D K+  K+   + E+ K E   
Sbjct: 61  HLTRHPRKKIQSFASDLIEIWKDIVIKETNKNRRNESSDDKDSVKVEMVNPETAKAEKDM 120

Query: 121 KSS--SMKAERVSKVEQFDRNGSTSSVKFSRS-ASAVSEKXXXXXXXXXXXXXXXXXXXX 180
           K+S    KAE + KV + +RNG  S  K SR+ A     K                    
Sbjct: 121 KTSVRFSKAESI-KVVKTERNGMPSLEKVSRTDAVKTGRKVRSVDVGKIEKTDLAENDKL 180

Query: 181 XXXXXXXXXXXG------AAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMD 240
                      G        GPPKL SMIKS DA RDK+RELL EA S+V  EA+ED+ D
Sbjct: 181 EKIIKEEKRASGVKKPLVCPGPPKLMSMIKSNDAMRDKVRELLHEALSRVSNEANEDIQD 240

Query: 241 EVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPE 300
           EVNA DPIRVAVSVES++F+NWG S GAQKAKYRS+MFNLKD KNPDFRR+VLLG +KPE
Sbjct: 241 EVNACDPIRVAVSVESILFDNWGSSQGAQKAKYRSLMFNLKDAKNPDFRRRVLLGHVKPE 300

Query: 301 RMTNLSTTDMASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQT 360
            + N+ST +MASD+R+ EN  I ++ALF+CERG  PK TTDQF+         TYYQ+QT
Sbjct: 301 WLVNMSTAEMASDKRQNENRLIEERALFDCERGAPPKETTDQFRCGRCGQRKCTYYQMQT 360

Query: 361 RSADEPMTTFVTCVNCNNHWKFC 375
           RSADEPMTT+VTCVNCNNHWKFC
Sbjct: 361 RSADEPMTTYVTCVNCNNHWKFC 380

BLAST of Carg05937 vs. TrEMBL
Match: tr|M5X6N8|M5X6N8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G265300 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.7e-108
Identity = 254/381 (66.67%), Postives = 292/381 (76.64%), Query Frame = 0

Query: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MEKEL+ELFEA KK+ADAA   S DGGAEES+CLDAL QLK FPVTYQ+L+STQVGKRLR
Sbjct: 1   MEKELLELFEAVKKSADAAT--SCDGGAEESQCLDALEQLKNFPVTYQLLISTQVGKRLR 60

Query: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQ 120
           HLTKHP+KKIQ ++S LI+ WK IVIKE NK+ KNGN +  +  K  SPSAES + E +Q
Sbjct: 61  HLTKHPRKKIQTFSSALIDTWKGIVIKEANKDAKNGNLERIDSLKRASPSAESPRAEKVQ 120

Query: 121 KSSSMKAERVSKVEQFDRNGSTSSVKFSRSASAVSE-------KXXXXXXXXXXXXXXXX 180
           K+S                     VK S   +  SE        XXXXXXXXXXXXXXXX
Sbjct: 121 KTSXXXXXXXXXXXXXXXXXXXXGVKPSSDKAYSSETVXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEV 240
           XXXXXXXXXXXXX   ++ PPKLTSMIKS D ARD++R +L EA SKV  EADE   D V
Sbjct: 181 XXXXXXXXXXXXXALNSSAPPKLTSMIKSNDTARDRVRGMLHEALSKVSQEADERFADYV 240

Query: 241 NASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERM 300
           NASDPIRVAV++ESV+FE+WGGSTGAQKAKYRS++FNLKD KNPDFRRKVLLG I+ ER+
Sbjct: 241 NASDPIRVAVTLESVLFEHWGGSTGAQKAKYRSLIFNLKDQKNPDFRRKVLLGDIEAERL 300

Query: 301 TNLSTTDMASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRS 360
            ++ST +MASDQR+ EN+++ QKALFECERGGAPKATTDQFK        TTYYQ+QTRS
Sbjct: 301 VDMSTAEMASDQRQEENKKLEQKALFECERGGAPKATTDQFKCGRCGHRKTTYYQMQTRS 360

Query: 361 ADEPMTTFVTCVNCNNHWKFC 375
           ADEPMTT+VTCVNCNN WKFC
Sbjct: 361 ADEPMTTYVTCVNCNNRWKFC 379

BLAST of Carg05937 vs. TrEMBL
Match: tr|F6HC30|F6HC30_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0067g03170 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.1e-106
Identity = 223/374 (59.63%), Postives = 252/374 (67.38%), Query Frame = 0

Query: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MEKEL+ELFEA KKAADAAA  S    +EE RCLDAL+QLK FPVTYQ+LVSTQVGKRLR
Sbjct: 1   MEKELLELFEATKKAADAAAVNSG-APSEEERCLDALKQLKDFPVTYQVLVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQ 120
            LTKHP KKIQ  ASDLI++WK+IVI+ET KNKKNG+ + KE  K  + + E+VK   L 
Sbjct: 61  TLTKHPTKKIQALASDLIDIWKNIVIEETTKNKKNGDLEDKESPKPVTANPENVKATPLL 120

Query: 121 KSSSMKAERVSKVEQFDRNGSTSSVKFSRSASAVSEKXXXXXXXXXXXXXXXXXXXXXXX 180
           K        VSK E       TS VK                                  
Sbjct: 121 K--------VSKAENIKVEKQTSGVK---------------------------------- 180

Query: 181 XXXXXXXXGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 240
                      GPPKLTS+ K  DA RDK+RELL EA SKV GEADED+MD VNA DPIR
Sbjct: 181 ----KPSHNIVGPPKLTSISKCNDALRDKVRELLSEALSKVVGEADEDIMDAVNACDPIR 240

Query: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300
           VAVSVESVMFE WG S+GA K KYRS+MFN+KD KNPD RRKVLLG + PER+  +   +
Sbjct: 241 VAVSVESVMFEKWGRSSGAHKLKYRSLMFNIKDAKNPDLRRKVLLGQVMPERLLEMGPEE 300

Query: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKXXXXXXXXTTYYQLQTRSADEPMTT 360
           MASD+R+ EN++I +KALF+CE G APKATTDQFK        TTYYQLQTRSADEPMTT
Sbjct: 301 MASDRRQLENQQIKEKALFDCELGAAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 327

Query: 361 FVTCVNCNNHWKFC 375
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 327

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022957122.12.8e-17498.93transcription elongation factor TFIIS-like [Cucurbita moschata][more]
XP_023531955.11.2e-17298.40transcription elongation factor TFIIS-like [Cucurbita pepo subsp. pepo][more]
XP_008456781.11.3e-16089.57PREDICTED: transcription elongation factor TFIIS [Cucumis melo][more]
XP_022134049.11.2e-15888.06transcription elongation factor TFIIS [Momordica charantia] >XP_022134050.1 tran... [more]
XP_022989946.14.9e-15591.18transcription elongation factor TFIIS-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT2G38560.15.0e-9354.86transcript elongation factor IIS[more]
AT2G42730.14.6e-2245.38F-box family protein[more]
AT4G18720.13.0e-2150.45Transcription factor IIS protein[more]
AT5G42325.12.5e-1235.88Transcription factor IIS protein[more]
AT5G25520.22.6e-0938.55SPOC domain / Transcription elongation factor S-II protein[more]
Match NameE-valueIdentityDescription
sp|Q9ZVH8|RDO2_ARATH9.0e-9254.86Transcription elongation factor TFIIS OS=Arabidopsis thaliana OX=3702 GN=TFIIS P... [more]
sp|Q15560|TCEA2_HUMAN4.0e-2326.56Transcription elongation factor A protein 2 OS=Homo sapiens OX=9606 GN=TCEA2 PE=... [more]
sp|P20232|TFS2_DROME4.4e-2235.67Transcription elongation factor S-II OS=Drosophila melanogaster OX=7227 GN=TfIIS... [more]
sp|Q9QVN7|TCEA2_MOUSE5.7e-2228.10Transcription elongation factor A protein 2 OS=Mus musculus OX=10090 GN=Tcea2 PE... [more]
sp|Q148K0|TCEA2_BOVIN9.8e-2230.35Transcription elongation factor A protein 2 OS=Bos taurus OX=9913 GN=TCEA2 PE=2 ... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3C448|A0A1S3C448_CUCME8.8e-16189.57transcription elongation factor TFIIS OS=Cucumis melo OX=3656 GN=LOC103496629 PE... [more]
tr|A0A0A0KDH9|A0A0A0KDH9_CUCSA7.7e-14986.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014610 PE=4 SV=1[more]
tr|A0A2I4ER36|A0A2I4ER36_9ROSI1.7e-11160.05transcription elongation factor TFIIS-like OS=Juglans regia OX=51240 GN=LOC10899... [more]
tr|M5X6N8|M5X6N8_PRUPE1.7e-10866.67Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G265300 PE=4 SV=1[more]
tr|F6HC30|F6HC30_VITVI8.1e-10659.63Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0067g03170 PE=4 SV=... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR035441TFIIS/LEDGF_dom_sf
IPR017923TFIIS_N
IPR006289TFSII
IPR035100TF_IIS-typ
IPR036575TFIIS_cen_dom_sf
IPR003617TFIIS/CRSP70_N_sub
IPR003618TFIIS_cen_dom
IPR001222Znf_TFIIS
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05937-RACarg05937-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001222Zinc finger, TFIIS-typeSMARTSM00440Cys4_2coord: 334..373
e-value: 9.7E-24
score: 94.9
IPR001222Zinc finger, TFIIS-typePFAMPF01096TFIIS_Ccoord: 334..372
e-value: 1.2E-19
score: 69.8
IPR001222Zinc finger, TFIIS-typePROSITEPS00466ZF_TFIIS_1coord: 336..371
IPR001222Zinc finger, TFIIS-typePROSITEPS51133ZF_TFIIS_2coord: 332..372
score: 14.637
IPR003618Transcription elongation factor S-II, central domainSMARTSM00510mid_6coord: 204..312
e-value: 4.2E-34
score: 129.3
IPR003618Transcription elongation factor S-II, central domainPFAMPF07500TFIIS_Mcoord: 204..321
e-value: 1.7E-29
score: 102.4
IPR003618Transcription elongation factor S-II, central domainPROSITEPS51321TFIIS_CENTRALcoord: 206..329
score: 32.06
IPR003617Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-typeSMARTSM00509TFS2_5coord: 8..87
e-value: 2.6E-23
score: 93.4
IPR036575Transcription elongation factor S-II, central domain superfamilyGENE3DG3DSA:1.10.472.30coord: 193..303
e-value: 1.2E-29
score: 104.9
IPR036575Transcription elongation factor S-II, central domain superfamilySUPERFAMILYSSF46942Elongation factor TFIIS domain 2coord: 195..304
IPR035100Transcription elongation factor, IIS-typePIRSFPIRSF006704TFIIScoord: 2..374
e-value: 1.2E-96
score: 321.8
IPR006289Transcription elongation factor, TFIISTIGRFAMTIGR01385TIGR01385coord: 12..374
e-value: 4.2E-97
score: 323.4
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 36..85
e-value: 2.4E-11
score: 43.4
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 10..88
score: 20.947
IPR035441TFIIS/LEDGF domain superfamilyGENE3DG3DSA:1.20.930.10coord: 1..101
e-value: 2.2E-18
score: 67.8
IPR035441TFIIS/LEDGF domain superfamilySUPERFAMILYSSF47676Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 27..99
NoneNo IPR availableGENE3DG3DSA:2.20.25.10coord: 304..374
e-value: 1.8E-28
score: 100.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..143
NoneNo IPR availablePANTHERPTHR11477TRANSCRIPTION ELONGATION FACTOR S-IIcoord: 9..372
NoneNo IPR availablePANTHERPTHR11477:SF0TRANSCRIPTION ELONGATION FACTOR S-IIcoord: 9..372
NoneNo IPR availableCDDcd00183TFIIS_Icoord: 24..85
e-value: 1.00219E-15
score: 70.415
NoneNo IPR availableCDDcd13749Zn-ribbon_TFIIScoord: 327..373
e-value: 2.11837E-29
score: 107.307
NoneNo IPR availableSUPERFAMILYSSF57783Zinc beta-ribboncoord: 319..372

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg05937Carg02162Silver-seed gourdcarcarB020