Carg04300 (gene) Silver-seed gourd

Overview
NameCarg04300
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionDof zinc finger protein like
LocationCucurbita_argyrosperma_scaffold_044 : 1276200 .. 1276838 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGACCCATCAACTTTTCCGATGATTAAACCCCAATTTCCCGAACAAGAGCAGCTTAAATGCCCTCGATGTGATTCTACAAACACCAAATTTTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGTCGGTACTGGACCAAAGGCGGCGCTCTGCGGAATATCCCTGTCGGCGGAGGAAGCCGGAAAAACGCCAAGCGACCGGCGGTGTCGGCCACCGTCAAGCGTCCGCCGTCCTCCTCATCTTCGTCTTCTTCGGGATCGATGCTGAACCCGATTACGGGTCCGGATCATAACCCCATCCGTGGCTATGGCGGCGGGTTGGAAATTCCGGGGAGCTTCAGCTCGCTGCTGGCGTCAAATGGGCAATATGGGAATCTCCTGGAGAGTATGGATCCGAATCAACCGGAGATGAAAATGATGGAATTGGGAGGATTTTCGGAGAATTTGAATTCTGGGTCTGGCCGGAAATCTGCAGCGGAGGAACAGAGCGGCTGCGTGCCGGAGAATTATTTGGGTGTGTTGCAGAACGGCGATTCCAGTTGTTGGACCGGCGGTGGCAGCAATGGATGGCCTGATCTTGCCATTTTCACACCAGGTTCAAGTTACCAGTAA

mRNA sequence

ATGCAAGACCCATCAACTTTTCCGATGATTAAACCCCAATTTCCCGAACAAGAGCAGCTTAAATGCCCTCGATGTGATTCTACAAACACCAAATTTTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGTCGGTACTGGACCAAAGGCGGCGCTCTGCGGAATATCCCTGTCGGCGGAGGAAGCCGGAAAAACGCCAAGCGACCGGCGGTGTCGGCCACCGTCAAGCGTCCGCCGTCCTCCTCATCTTCGTCTTCTTCGGGATCGATGCTGAACCCGATTACGGGTCCGGATCATAACCCCATCCGTGGCTATGGCGGCGGGTTGGAAATTCCGGGGAGCTTCAGCTCGCTGCTGGCGTCAAATGGGCAATATGGGAATCTCCTGGAGAGTATGGATCCGAATCAACCGGAGATGAAAATGATGGAATTGGGAGGATTTTCGGAGAATTTGAATTCTGGGTCTGGCCGGAAATCTGCAGCGGAGGAACAGAGCGGCTGCGTGCCGGAGAATTATTTGGGTGTGTTGCAGAACGGCGATTCCAGTTGTTGGACCGGCGGTGGCAGCAATGGATGGCCTGATCTTGCCATTTTCACACCAGGTTCAAGTTACCAGTAA

Coding sequence (CDS)

ATGCAAGACCCATCAACTTTTCCGATGATTAAACCCCAATTTCCCGAACAAGAGCAGCTTAAATGCCCTCGATGTGATTCTACAAACACCAAATTTTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGTCGGTACTGGACCAAAGGCGGCGCTCTGCGGAATATCCCTGTCGGCGGAGGAAGCCGGAAAAACGCCAAGCGACCGGCGGTGTCGGCCACCGTCAAGCGTCCGCCGTCCTCCTCATCTTCGTCTTCTTCGGGATCGATGCTGAACCCGATTACGGGTCCGGATCATAACCCCATCCGTGGCTATGGCGGCGGGTTGGAAATTCCGGGGAGCTTCAGCTCGCTGCTGGCGTCAAATGGGCAATATGGGAATCTCCTGGAGAGTATGGATCCGAATCAACCGGAGATGAAAATGATGGAATTGGGAGGATTTTCGGAGAATTTGAATTCTGGGTCTGGCCGGAAATCTGCAGCGGAGGAACAGAGCGGCTGCGTGCCGGAGAATTATTTGGGTGTGTTGCAGAACGGCGATTCCAGTTGTTGGACCGGCGGTGGCAGCAATGGATGGCCTGATCTTGCCATTTTCACACCAGGTTCAAGTTACCAGTAA

Protein sequence

MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPITGPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ
Homology
[Close]
BLAST of Carg04300 vs. NCBI nr
Match: XP_022948818.1 (dof zinc finger protein DOF1.7-like [Cucurbita moschata])

HSP 1 Score: 407.9 bits (1047), Expect = 2.1e-110
Identity = 211/212 (99.53%), Postives = 212/212 (100.00%), Query Frame = 0 

Query: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTFPMIKPQ+PEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQYPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPITGPDHNPIRGYGGGLEIPG 120
           RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPITGPDHNPIRGYGGGLEIPG
Sbjct: 61  RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPITGPDHNPIRGYGGGLEIPG 120

Query: 121 SFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENYL 180
           SFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENYL
Sbjct: 121 SFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENYL 180

Query: 181 GVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 213
           GVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]
BLAST of Carg04300 vs. NCBI nr
Match: XP_023523362.1 (dof zinc finger protein DOF1.7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.4 bits (1038), Expect = 2.3e-109
Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0 

Query: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPITGPDHNPIRGYGGGLEIPG 120
           RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPI GPDHNPIRGYGGGLEIPG
Sbjct: 61  RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPIAGPDHNPIRGYGGGLEIPG 120

Query: 121 SFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENYL 180
           SFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFS NLNSGSGRKSAAEEQSGCVPENYL
Sbjct: 121 SFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGSGRKSAAEEQSGCVPENYL 180

Query: 181 GVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 213
           GVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]
BLAST of Carg04300 vs. NCBI nr
Match: XP_022997902.1 (dof zinc finger protein DOF1.7-like [Cucurbita maxima])

HSP 1 Score: 373.2 bits (957), Expect = 5.7e-100
Identity = 196/212 (92.45%), Postives = 197/212 (92.92%), Query Frame = 0 

Query: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPITGPDHNPIRGYGGGLEIPG 120
           RNIPVGG            XXXXXXXXXXXXXXXXXM NPITGPDHNPIRGYGGGLEIPG
Sbjct: 61  RNIPVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRNPITGPDHNPIRGYGGGLEIPG 120

Query: 121 SFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENYL 180
           SFSSLLASNGQYGNLLE MDPNQPEMKMMELGGFSENL SGSGRKSAAEEQSGCVPENYL
Sbjct: 121 SFSSLLASNGQYGNLLEGMDPNQPEMKMMELGGFSENLISGSGRKSAAEEQSGCVPENYL 180

Query: 181 GVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 213
           G+LQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GMLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]
BLAST of Carg04300 vs. NCBI nr
Match: KGN59833.1 (hypothetical protein Csa_3G849890 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 2.7e-89
Identity = 166/212 (78.30%), Postives = 175/212 (82.55%), Query Frame = 0 

Query: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTF  IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPITGPDHNPIRGYGGGLEIPG 120
           RNIPVGGG+RKN+KR   +                   N IT PDHNPIRGYGGGL+IPG
Sbjct: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHP-----NTITVPDHNPIRGYGGGLDIPG 120

Query: 121 SFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENYL 180
           SFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG F     SGSGRKSAAEEQS  VPENYL
Sbjct: 121 SFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGSGRKSAAEEQSAGVPENYL 180

Query: 181 GVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 213
           GVLQNGDS+CW GGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 202

[Close]
BLAST of Carg04300 vs. NCBI nr
Match: XP_008447593.1 (PREDICTED: dof zinc finger protein DOF1.7-like [Cucumis melo])

HSP 1 Score: 322.4 bits (825), Expect = 1.2e-84
Identity = 171/212 (80.66%), Postives = 178/212 (83.96%), Query Frame = 0 

Query: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTF  IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPITGPDHNPIRGYGGGLEIPG 120
           RNIPVGG            XXXXXXXXXXX        NPI  PDHNPIRGYGGGL+IPG
Sbjct: 61  RNIPVGGXXXXXXXXXXXXXXXXXXXXXXXTHP-----NPIAVPDHNPIRGYGGGLDIPG 120

Query: 121 SFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENYL 180
           SFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG F     SGSGRKSAAEEQS  VPENYL
Sbjct: 121 SFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGSGRKSAAEEQSATVPENYL 180

Query: 181 GVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 213
           GVLQNGDS+CW+GGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GVLQNGDSNCWSGGGSNGWPDLAIFTPGSSYQ 202

[Close]
BLAST of Carg04300 vs. TAIR10
Match: AT1G51700.1 (DOF zinc finger protein 1)

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-34
Identity = 77/135 (57.04%), Postives = 85/135 (62.96%), Query Frame = 0 

Query: 11  KPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSR 70
           +P+ PEQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGG+R
Sbjct: 24  QPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83

Query: 71  KNAKRPAVS------XXXXXXXXXXXXXXXXXMLNPITGPDHNPIR---GYGGGLEIPGS 130
           K+ KR   S                           ++G + NP R   G   G     S
Sbjct: 84  KSNKRSGSSPSSNLKNQTVAEKPDHHGSGSEEKEERVSGQEMNPTRMLYGLPVGDPNGAS 143

Query: 131 FSSLLASNGQYGNLL 137
           FSSLLASN Q G L+
Sbjct: 144 FSSLLASNMQMGGLV 158

[Close]
BLAST of Carg04300 vs. TAIR10
Match: AT3G21270.1 (DOF zinc finger protein 2)

HSP 1 Score: 139.8 bits (351), Expect = 1.9e-33
Identity = 97/158 (61.39%), Postives = 105/158 (66.46%), Query Frame = 0 

Query: 1   MQDPSTF---------PMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCR 60
           MQDP+ +              QF EQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCK+CR
Sbjct: 1   MQDPAAYXXXXXXXXXXXXXXQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTKGGALRNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPITG-------P 120
           RYWTKGGALRN+PVGGGSRKNA +    XXXXXXXXXXXXXXXXX              P
Sbjct: 61  RYWTKGGALRNVPVGGGSRKNATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSQKP 120

Query: 121 DHNPIRGYGG---------GLEIPGSFSSLLASNGQYG 134
           D +P R   G         G+EI GSFSSLLA+N Q G
Sbjct: 121 DLDPTRMLYGFPIGDQDVKGMEIGGSFSSLLANNMQLG 158

[Close]
BLAST of Carg04300 vs. TAIR10
Match: AT3G50410.1 (OBF binding protein 1)

HSP 1 Score: 117.9 bits (294), Expect = 7.8e-27
Identity = 50/64 (78.12%), Postives = 56/64 (87.50%), Query Frame = 0 

Query: 12 PQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRK 71
          P   +QEQL CPRCDS+NTKFCYYNNYN SQPRHFCK CRRYWT GG LR++PVGGG+RK
Sbjct: 22 PISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRK 81

Query: 72 NAKR 76
          +AKR
Sbjct: 82 SAKR 85

[Close]
BLAST of Carg04300 vs. TAIR10
Match: AT5G66940.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 116.3 bits (290), Expect = 2.3e-26
Identity = 49/60 (81.67%), Postives = 55/60 (91.67%), Query Frame = 0 

Query: 16 EQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKR 75
          +QEQL CPRC+STNTKFCYYNNYN SQPRHFCK+CRRYWT GG LR+IPVGG SRK++KR
Sbjct: 28 QQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKR 87

[Close]
BLAST of Carg04300 vs. TAIR10
Match: AT5G60850.1 (OBF binding protein 4)

HSP 1 Score: 115.2 bits (287), Expect = 5.1e-26
Identity = 50/58 (86.21%), Postives = 53/58 (91.38%), Query Frame = 0 

Query: 18  EQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKR 76
           + LKCPRC+S NTKFCYYNNYNLSQPRHFCKNCRRYWTKGG LRN+PVGGG RK AKR
Sbjct: 49  QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRK-AKR 105

[Close]
BLAST of Carg04300 vs. Swiss-Prot
Match: sp|O82155|DOF17_ARATH (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.1e-33
Identity = 77/135 (57.04%), Postives = 85/135 (62.96%), Query Frame = 0 

Query: 11  KPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSR 70
           +P+ PEQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGG+R
Sbjct: 24  QPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83

Query: 71  KNAKRPAVS------XXXXXXXXXXXXXXXXXMLNPITGPDHNPIR---GYGGGLEIPGS 130
           K+ KR   S                           ++G + NP R   G   G     S
Sbjct: 84  KSNKRSGSSPSSNLKNQTVAEKPDHHGSGSEEKEERVSGQEMNPTRMLYGLPVGDPNGAS 143

Query: 131 FSSLLASNGQYGNLL 137
           FSSLLASN Q G L+
Sbjct: 144 FSSLLASNMQMGGLV 158

[Close]
BLAST of Carg04300 vs. Swiss-Prot
Match: sp|Q94AR6|DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 3.5e-32
Identity = 97/158 (61.39%), Postives = 105/158 (66.46%), Query Frame = 0 

Query: 1   MQDPSTF---------PMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCR 60
           MQDP+ +              QF EQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCK+CR
Sbjct: 1   MQDPAAYXXXXXXXXXXXXXXQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTKGGALRNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPITG-------P 120
           RYWTKGGALRN+PVGGGSRKNA +    XXXXXXXXXXXXXXXXX              P
Sbjct: 61  RYWTKGGALRNVPVGGGSRKNATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSQKP 120

Query: 121 DHNPIRGYGG---------GLEIPGSFSSLLASNGQYG 134
           D +P R   G         G+EI GSFSSLLA+N Q G
Sbjct: 121 DLDPTRMLYGFPIGDQDVKGMEIGGSFSSLLANNMQLG 158

[Close]
BLAST of Carg04300 vs. Swiss-Prot
Match: sp|Q39088|DOF34_ARATH (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-25
Identity = 50/64 (78.12%), Postives = 56/64 (87.50%), Query Frame = 0 

Query: 12 PQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRK 71
          P   +QEQL CPRCDS+NTKFCYYNNYN SQPRHFCK CRRYWT GG LR++PVGGG+RK
Sbjct: 22 PISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRK 81

Query: 72 NAKR 76
          +AKR
Sbjct: 82 SAKR 85

[Close]
BLAST of Carg04300 vs. Swiss-Prot
Match: sp|Q6Z345|DOF4_ORYSJ (Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.1e-25
Identity = 48/57 (84.21%), Postives = 52/57 (91.23%), Query Frame = 0 

Query: 15 PEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRK 72
          P  E +KCPRC+STNTKFCYYNNYNLSQPRHFCK+CRRYWTKGG LRN+PVGGG RK
Sbjct: 40 PSPEAVKCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRK 96

[Close]
BLAST of Carg04300 vs. Swiss-Prot
Match: sp|Q9FGD6|DOF58_ARATH (Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana OX=3702 GN=DOF5.8 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-25
Identity = 49/60 (81.67%), Postives = 55/60 (91.67%), Query Frame = 0 

Query: 16 EQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKR 75
          +QEQL CPRC+STNTKFCYYNNYN SQPRHFCK+CRRYWT GG LR+IPVGG SRK++KR
Sbjct: 28 QQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKR 87

[Close]
BLAST of Carg04300 vs. TrEMBL
Match: tr|A0A0A0LDG2|A0A0A0LDG2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G849890 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.8e-89
Identity = 166/212 (78.30%), Postives = 175/212 (82.55%), Query Frame = 0 

Query: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTF  IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPITGPDHNPIRGYGGGLEIPG 120
           RNIPVGGG+RKN+KR   +                   N IT PDHNPIRGYGGGL+IPG
Sbjct: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHP-----NTITVPDHNPIRGYGGGLDIPG 120

Query: 121 SFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENYL 180
           SFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG F     SGSGRKSAAEEQS  VPENYL
Sbjct: 121 SFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGSGRKSAAEEQSAGVPENYL 180

Query: 181 GVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 213
           GVLQNGDS+CW GGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 202

[Close]
BLAST of Carg04300 vs. TrEMBL
Match: tr|A0A1S3BHT0|A0A1S3BHT0_CUCME (dof zinc finger protein DOF1.7-like OS=Cucumis melo OX=3656 GN=LOC103490008 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 7.6e-85
Identity = 171/212 (80.66%), Postives = 178/212 (83.96%), Query Frame = 0 

Query: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTF  IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPITGPDHNPIRGYGGGLEIPG 120
           RNIPVGG            XXXXXXXXXXX        NPI  PDHNPIRGYGGGL+IPG
Sbjct: 61  RNIPVGGXXXXXXXXXXXXXXXXXXXXXXXTHP-----NPIAVPDHNPIRGYGGGLDIPG 120

Query: 121 SFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENYL 180
           SFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG F     SGSGRKSAAEEQS  VPENYL
Sbjct: 121 SFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGSGRKSAAEEQSATVPENYL 180

Query: 181 GVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 213
           GVLQNGDS+CW+GGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GVLQNGDSNCWSGGGSNGWPDLAIFTPGSSYQ 202

[Close]
BLAST of Carg04300 vs. TrEMBL
Match: tr|A0A2N9HU28|A0A2N9HU28_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43095 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 6.9e-62
Identity = 153/231 (66.23%), Postives = 171/231 (74.03%), Query Frame = 0 

Query: 1   MQDP-STFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGA 60
           MQDP +TF  +KP FPEQEQLKCPRC+S NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGA
Sbjct: 1   MQDPAATFHPVKPHFPEQEQLKCPRCESANTKFCYYNNYNLSQPRHFCKNCRRYWTKGGA 60

Query: 61  LRNIPVGGGSRKNA---KRPAVSXXXXXXXXXXXXXXXXXMLNPITGPDHNPIRGYGGG- 120
           LRNIPVGGGSRKN          XXXXXXXXXXXXXXXXX  NP  G +H+P R YG G 
Sbjct: 61  LRNIPVGGGSRKNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXNP--GQEHDPARIYGVGA 120

Query: 121 --------LEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNS------G 180
                   L+I GSFSSLL SNGQ+G+LLE ++PN  ++KM ++G F+ENLNS      G
Sbjct: 121 PVDQDHRMLDITGSFSSLLTSNGQFGSLLEGLNPNGSDVKMSQMGDFAENLNSGRVLDTG 180

Query: 181 SGRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 213
           SGR    E QS    E+YLG LQNGDSS W   G+NGWPDLAI+TPGSS Q
Sbjct: 181 SGRNPGMEVQSNSNSESYLG-LQNGDSSYW--AGANGWPDLAIYTPGSSLQ 226

[Close]
BLAST of Carg04300 vs. TrEMBL
Match: tr|A0A1U8ALW5|A0A1U8ALW5_NELNU (dof zinc finger protein DOF3.1-like OS=Nelumbo nucifera OX=4432 GN=LOC104604417 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.4e-61
Identity = 131/217 (60.37%), Postives = 150/217 (69.12%), Query Frame = 0 

Query: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTF  +KP FPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPVKPHFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGSRKNAKR-----PAVSXXXXXXXXXXXXXXXXXMLNPITGPDHNPIRGYGGG 120
           RNIPVGGGSRKN KR         XXXX                P+T  DH+        
Sbjct: 61  RNIPVGGGSRKNTKRXXXXXXXXXXXXXQNAAVPKPEPTGTFSPPVTTIDHDRRM----- 120

Query: 121 LEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCV 180
           L+I GSFSSLLASNGQ GNLL+ ++P+    + ++ G F+EN NS S   S  E Q    
Sbjct: 121 LDISGSFSSLLASNGQMGNLLDGLNPSSSGTRTLQFGEFAENSNSSSIENSTLELQGNNN 180

Query: 181 PENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 213
            E++LG+ Q+GDSSCW  G  NGWPDLAI+TPGS++Q
Sbjct: 181 QESFLGI-QDGDSSCW--GSGNGWPDLAIYTPGSTFQ 209

[Close]
BLAST of Carg04300 vs. TrEMBL
Match: tr|A0A2I4DRY8|A0A2I4DRY8_9ROSI (dof zinc finger protein DOF3.1-like OS=Juglans regia OX=51240 GN=LOC108982895 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 7.2e-59
Identity = 142/221 (64.25%), Postives = 166/221 (75.11%), Query Frame = 0 

Query: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDP+TF  IKP FPEQE LKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPATFQPIKPHFPEQELLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPITGPDHNPIRGYGG------ 120
           RNIPVGGG+RK        XXXXXXXXXXXXXXXXX+ NP  GP+H+P R YG       
Sbjct: 61  RNIPVGGGTRKXXXXXXXXXXXXXXXXXXXXXXXXXVENP--GPEHDPNRLYGSMVDQDR 120

Query: 121 -GLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSG 180
             L+I GSF SLLASNGQ+ +LLE ++P++  +KM+++G F+ENLNSG   ++ +    G
Sbjct: 121 RMLDITGSFGSLLASNGQFSSLLEGLNPDESGVKMLQMGEFAENLNSGHVLETGSVRNLG 180

Query: 181 C-------VPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTP 208
                     E+YLG LQ+GDSSCWT G  NGWPDL+I+TP
Sbjct: 181 MDVQISDNNSESYLG-LQSGDSSCWTDG--NGWPDLSIYTP 216

The following BLAST results are available for this feature:
BLAST of Carg04300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022948818.12.1e-11099.53dof zinc finger protein DOF1.7-like [Cucurbita moschata][more]
XP_023523362.12.3e-10999.06dof zinc finger protein DOF1.7-like [Cucurbita pepo subsp. pepo][more]
XP_022997902.15.7e-10092.45dof zinc finger protein DOF1.7-like [Cucurbita maxima][more]
KGN59833.12.7e-8978.30hypothetical protein Csa_3G849890 [Cucumis sativus][more]
XP_008447593.11.2e-8480.66PREDICTED: dof zinc finger protein DOF1.7-like [Cucumis melo][more]
BLAST of Carg04300 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G51700.12.3e-3457.04DOF zinc finger protein 1[more]
AT3G21270.11.9e-3361.39DOF zinc finger protein 2[more]
AT3G50410.17.8e-2778.13OBF binding protein 1[more]
AT5G66940.12.3e-2681.67Dof-type zinc finger DNA-binding family protein[more]
AT5G60850.15.1e-2686.21OBF binding protein 4[more]
BLAST of Carg04300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O82155|DOF17_ARATH4.1e-3357.04Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV... [more]
sp|Q94AR6|DOF31_ARATH3.5e-3261.39Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV... [more]
sp|Q39088|DOF34_ARATH1.4e-2578.13Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV... [more]
sp|Q6Z345|DOF4_ORYSJ3.1e-2584.21Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 ... [more]
sp|Q9FGD6|DOF58_ARATH4.1e-2581.67Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana OX=3702 GN=DOF5.8 PE=2 SV... [more]
BLAST of Carg04300 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LDG2|A0A0A0LDG2_CUCSA1.8e-8978.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G849890 PE=4 SV=1[more]
tr|A0A1S3BHT0|A0A1S3BHT0_CUCME7.6e-8580.66dof zinc finger protein DOF1.7-like OS=Cucumis melo OX=3656 GN=LOC103490008 PE=4... [more]
tr|A0A2N9HU28|A0A2N9HU28_FAGSY6.9e-6266.23Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43095 PE=4 SV=1[more]
tr|A0A1U8ALW5|A0A1U8ALW5_NELNU3.4e-6160.37dof zinc finger protein DOF3.1-like OS=Nelumbo nucifera OX=4432 GN=LOC104604417 ... [more]
tr|A0A2I4DRY8|A0A2I4DRY8_9ROSI7.2e-5964.25dof zinc finger protein DOF3.1-like OS=Juglans regia OX=51240 GN=LOC108982895 PE... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04300-RACarg04300-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 18..74
e-value: 1.2E-33
score: 114.9
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 22..58
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 11..75
e-value: 1.0E-29
score: 322.0
IPR003851Zinc finger, Dof-typePROSITEPS50884ZF_DOF_2coord: 20..74
score: 29.544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..114
NoneNo IPR availablePANTHERPTHR31992:SF23DOF ZINC FINGER PROTEIN DOF3.1coord: 1..209
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 1..209

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg04300Cla012621Watermelon (97103) v1carwmB0192
Carg04300Csa3G849890Cucumber (Chinese Long) v2carcuB0222
Carg04300MELO3C013043Melon (DHL92) v3.5.1carmeB0204
Carg04300ClCG07G013640Watermelon (Charleston Gray)carwcgB0199
Carg04300CSPI03G41550Wild cucumber (PI 183967)carcpiB0229
Carg04300Cucsa.341290Cucumber (Gy14) v1carcgyB0246
Carg04300CmaCh01G000730Cucurbita maxima (Rimu)carcmaB0278
Carg04300CmaCh14G012740Cucurbita maxima (Rimu)carcmaB0276
Carg04300CmoCh14G013060Cucurbita moschata (Rifu)carcmoB0283
Carg04300Lsi07G005600Bottle gourd (USVL1VR-Ls)carlsiB182
Carg04300Cp4.1LG02g14180Cucurbita pepo (Zucchini)carcpeB0285
Carg04300Cp4.1LG03g14290Cucurbita pepo (Zucchini)carcpeB0287
Carg04300CsGy3G039010Cucumber (Gy14) v2carcgybB0211
Carg04300MELO3C013043.2Melon (DHL92) v3.6.1carmedB0209
Carg04300CsaV3_3G043990Cucumber (Chinese Long) v3carcucB0226
Carg04300Cla97C07G140450Watermelon (97103) v2carwmbB0205
Carg04300Bhi01G002578Wax gourdcarwgoB0249
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg04300Carg06445Silver-seed gourdcarcarB139
The following block(s) are covering this gene:
GeneOrganismBlock
Carg04300Silver-seed gourdcarcarB042
Carg04300Silver-seed gourdcarcarB102
Carg04300Silver-seed gourdcarcarB233
Carg04300Silver-seed gourdcarcarB234
Carg04300Silver-seed gourdcarcarB238
Carg04300Silver-seed gourdcarcarB240
Carg04300Cucumber (Gy14) v2carcgybB0219
Carg04300Cucumber (Gy14) v1carcgyB0239
Carg04300Cucumber (Gy14) v1carcgyB0248
Carg04300Cucurbita maxima (Rimu)carcmaB0270
Carg04300Cucurbita maxima (Rimu)carcmaB0277
Carg04300Cucurbita maxima (Rimu)carcmaB0282
Carg04300Cucurbita maxima (Rimu)carcmaB0283
Carg04300Cucurbita moschata (Rifu)carcmoB0277
Carg04300Cucurbita moschata (Rifu)carcmoB0279
Carg04300Cucurbita moschata (Rifu)carcmoB0284
Carg04300Cucurbita moschata (Rifu)carcmoB0285
Carg04300Cucurbita moschata (Rifu)carcmoB0289
Carg04300Cucurbita pepo (Zucchini)carcpeB0280
Carg04300Cucurbita pepo (Zucchini)carcpeB0283
Carg04300Cucurbita pepo (Zucchini)carcpeB0284
Carg04300Cucurbita pepo (Zucchini)carcpeB0290
Carg04300Wild cucumber (PI 183967)carcpiB0237
Carg04300Wild cucumber (PI 183967)carcpiB0224
Carg04300Cucumber (Chinese Long) v2carcuB0216
Carg04300Cucumber (Chinese Long) v2carcuB0217
Carg04300Cucumber (Chinese Long) v2carcuB0230
Carg04300Cucumber (Chinese Long) v3carcucB0223
Carg04300Cucumber (Chinese Long) v3carcucB0234
Carg04300Bottle gourd (USVL1VR-Ls)carlsiB175
Carg04300Bottle gourd (USVL1VR-Ls)carlsiB177
Carg04300Bottle gourd (USVL1VR-Ls)carlsiB180
Carg04300Melon (DHL92) v3.5.1carmeB0202
Carg04300Melon (DHL92) v3.5.1carmeB0203
Carg04300Melon (DHL92) v3.5.1carmeB0209
Carg04300Melon (DHL92) v3.6.1carmedB0207
Carg04300Melon (DHL92) v3.6.1carmedB0208
Carg04300Melon (DHL92) v3.6.1carmedB0214
Carg04300Watermelon (Charleston Gray)carwcgB0189
Carg04300Watermelon (Charleston Gray)carwcgB0192
Carg04300Watermelon (Charleston Gray)carwcgB0196
Carg04300Watermelon (97103) v1carwmB0186
Carg04300Watermelon (97103) v1carwmB0190
Carg04300Watermelon (97103) v1carwmB0195
Carg04300Watermelon (97103) v2carwmbB0201
Carg04300Watermelon (97103) v2carwmbB0203
Carg04300Watermelon (97103) v2carwmbB0208
Carg04300Wax gourdcarwgoB0254
Carg04300Wax gourdcarwgoB0255