Cp4.1LG02g14180 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g14180
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDof zinc finger protein
LocationCp4.1LG02 : 14063732 .. 14064950 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTAAGTTGGAGAGTGTAGAACAAACAAGCTTAGAGAGAGAAACAAACAGATTCCACATTCCACTTTACAGAGAGAAAATAATTTATTATTTTTTTTATTTTTTTAAAAAAGGCTTTAATTCATCGTCTCTTTATATATGTCGACTGCTCGTCTCTTTCACGCGGATATCTCAACGTATTTCCTCCTCGCCGGCATAGTTTCTGTCACCGGCGATCTTCCTTTTTTCCGGCTCCAAAATCTCACAGAAACCAAAACATACGAACCCAGTTGAGGTTTTTGTGGTTTTCTTCTGAAAAGTTTCAGGCTTGTCCATTCATTTGCTTTTTGGAAGCATGAAAGCTACGGCTTGAAGCTCTTTTTAAACCACTTTTGTCGGATTTTCCCCCCTTTTTGCTCTGTTTTTGCTCTGTTTTAGTCTCTGTTTTTTCTTACAACAAAATCTCCAAACCCTTTCTCAGTTCCCCATCTTTGATCACCGAAACTTCTTCTCGAAAACTGAACCCAAGTTCTTTTTTCTTTTTTTCGCGAAAATTTTGATTTTGTGCTCTGTTTTTTGTTTCTGGGTAACCAAACAATGCAAGACCCATCAACTTTTCCCATGATTAAACCCCAATTTCCCGAACAAGAGCAGCTTAAATGCCCTCGATGTGATTCTACCAACACCAAATTTTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGTCGGTACTGGACCAAAGGCGGTGCTCTGCGGAACATCCCTGTCGGCGGAGGAAGCCGGAAAAACGCCAAGCGACCGGCGGTGTCGGCCACCGTCAAGCGTCCGCCGTCGTCCTCATCTTCGTCTTCTTCGGGATCGATGCTGAACCCGATTGCGGGTCCGGATCATAACCCCATCCGTGGGTATGGCGGCGGGTTGGAAATTCCGGGGAGCTTCAGCTCGCTGCTGGCGTCAAATGGGCAATATGGGAATCTCCTGGAGAGTATGGATCCGAATCAACCGGAGATGAAAATGATGGAATTGGGGGGATTTTCAGGGAATTTGAATTCTGGGTCTGGCCGGAAATCTGCAGCGGAGGAACAGAGCGGCTGCGTGCCGGAGAATTATTTGGGTGTGTTGCAGAACGGCGATTCCAGTTGTTGGACCGGCGGTGGCAGCAATGGATGGCCTGATCTTGCCATTTTCACACCAGGGTCAAGTTACCAGTAA

mRNA sequence

ATGGCACCTCGTCACTTTTGTAAGAATTGCCGTCGGTACTGGACCAAAGGCGGTGCTCTGCGGAACATCCCTGTCGGCGGAGGAAGCCGGAAAAACGCCAAGCGACCGGCGGTGTCGGCCACCGTCAAGCGTCCGCCGTCGTCCTCATCTTCGTCTTCTTCGGGATCGATGCTGAACCCGATTGCGGGTCCGGATCATAACCCCATCCGTGGGTATGGCGGCGGGTTGGAAATTCCGGGGAGCTTCAGCTCGCTGCTGGCGTCAAATGGGCAATATGGGAATCTCCTGGAGAGTATGGATCCGAATCAACCGGAGATGAAAATGATGGAATTGGGGGGATTTTCAGGGAATTTGAATTCTGGGTCTGGCCGGAAATCTGCAGCGGAGGAACAGAGCGGCTGCGTGCCGGAGAATTATTTGGGTGTGTTGCAGAACGGCGATTCCAGTTGTTGGACCGGCGGTGGCAGCAATGGATGGCCTGATCTTGCCATTTTCACACCAGGGTCAAGTTACCAGTAA

Coding sequence (CDS)

ATGGCACCTCGTCACTTTTGTAAGAATTGCCGTCGGTACTGGACCAAAGGCGGTGCTCTGCGGAACATCCCTGTCGGCGGAGGAAGCCGGAAAAACGCCAAGCGACCGGCGGTGTCGGCCACCGTCAAGCGTCCGCCGTCGTCCTCATCTTCGTCTTCTTCGGGATCGATGCTGAACCCGATTGCGGGTCCGGATCATAACCCCATCCGTGGGTATGGCGGCGGGTTGGAAATTCCGGGGAGCTTCAGCTCGCTGCTGGCGTCAAATGGGCAATATGGGAATCTCCTGGAGAGTATGGATCCGAATCAACCGGAGATGAAAATGATGGAATTGGGGGGATTTTCAGGGAATTTGAATTCTGGGTCTGGCCGGAAATCTGCAGCGGAGGAACAGAGCGGCTGCGTGCCGGAGAATTATTTGGGTGTGTTGCAGAACGGCGATTCCAGTTGTTGGACCGGCGGTGGCAGCAATGGATGGCCTGATCTTGCCATTTTCACACCAGGGTCAAGTTACCAGTAA

Protein sequence

MAPRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIAGPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGSGRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ
Homology
[Close]
BLAST of Cp4.1LG02g14180 vs. Swiss-Prot
Match: DOF17_ARATH (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-15
Identity = 54/104 (51.92%), Postives = 60/104 (57.69%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVS-------ATVKRPPSSSSSSSSG 62
           PRHFCKNCRRYWTKGGALRNIPVGGG+RK+ KR   S        TV   P    S S  
Sbjct: 56  PRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRSGSSPSSNLKNQTVAEKPDHHGSGSE- 115

Query: 63  SMLNPIAGPDHNPIR---GYGGGLEIPGSFSSLLASNGQYGNLL 97
                ++G + NP R   G   G     SFSSLLASN Q G L+
Sbjct: 116 EKEERVSGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQMGGLV 158

[Close]
BLAST of Cp4.1LG02g14180 vs. Swiss-Prot
Match: DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 1.7e-13
Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCK+CRRYWTKGGALRN+PVGGGSRKNA + + S++     SS+SS S+ S      
Sbjct: 52  PRHFCKSCRRYWTKGGALRNVPVGGGSRKNATKRSTSSS-----SSASSPSNSSQNKKTK 111

Query: 63  GPDHNP 69
            PD +P
Sbjct: 112 NPDPDP 112

[Close]
BLAST of Cp4.1LG02g14180 vs. Swiss-Prot
Match: DOF34_ARATH (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 9.3e-12
Identity = 65/211 (30.81%), Postives = 87/211 (41.23%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLN--- 62
           PRHFCK CRRYWT GG LR++PVGGG+RK+AKR    +      +SSSSS SG + N   
Sbjct: 53  PRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRSRTCS------NSSSSSVSGVVSNSNG 112

Query: 63  ------PIAGPDHNPIRGY----------GGGLEIPGSFSSLLASNGQYGNLLESMDPNQ 122
                 P+  P  +   G           G  L + GSF+S L ++              
Sbjct: 113 VPLQTTPVLFPQSSISNGVTHTVTESDGKGSALSLCGSFTSTLLNHNAAATATHGSG--- 172

Query: 123 PEMKMMELGGFSGNLNS-------GSGRKSAAEEQSGCVPENYLGV-------------- 171
               ++ +GGF   L S       G GR        G      +G               
Sbjct: 173 ---SVIGIGGFGIGLGSGFDDVSFGLGRAMWPFSTVGTATTTNVGSNGGHHAVPMPATWQ 232

[Close]
BLAST of Cp4.1LG02g14180 vs. Swiss-Prot
Match: DOF41_ARATH (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11
Identity = 45/107 (42.06%), Postives = 64/107 (59.81%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSM--LNP 62
           PR+ CK+CRRYWT+GG+LRN+PVGGGSRKN K P         P+SS+SSS+ ++  LNP
Sbjct: 91  PRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKKLPF--------PNSSTSSSTKNLPDLNP 150

Query: 63  -----IAGPDHNPIRGYGGGLEIPGSFSSLL---ASNGQYGNLLESM 100
                 +    NP + +    ++  SFSS +    + G YG+  E +
Sbjct: 151 PFVFTSSASSSNPSKTHQNNNDLSLSFSSPMQDKRAQGHYGHFSEQV 189

[Close]
BLAST of Cp4.1LG02g14180 vs. Swiss-Prot
Match: DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11
Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCK CRRYWT+GGALRN+PVGGG R+N K+   +  +K   SSS  SSS +  +P +
Sbjct: 100 PRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKK-GKNGNLKSSSSSSKQSSSVNAQSPSS 159

Query: 63  G 64
           G
Sbjct: 160 G 159

[Close]
BLAST of Cp4.1LG02g14180 vs. TrEMBL
Match: A0A0A0LDG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G849890 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 8.9e-70
Identity = 138/170 (81.18%), Postives = 149/170 (87.65%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGG+RKN+KR AV+ATVKRPPSS+SS+      N I 
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKR-AVAATVKRPPSSTSSTHP----NTIT 102

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
            PDHNPIRGYGGGL+IPGSFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG FSG     S
Sbjct: 103 VPDHNPIRGYGGGLDIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEFSG-----S 162

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 173
           GRKSAAEEQS  VPENYLGVLQNGDS+CW GGGSNGWPDLAIFTPGSSYQ
Sbjct: 163 GRKSAAEEQSAGVPENYLGVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 202

[Close]
BLAST of Cp4.1LG02g14180 vs. TrEMBL
Match: M5WV64_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011022mg PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-43
Identity = 109/187 (58.29%), Postives = 129/187 (68.98%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGG+LRNIPVGGGSRKN KR + SA+ +   +SSSS SS S     A
Sbjct: 43  PRHFCKNCRRYWTKGGSLRNIPVGGGSRKNTKRSSSSASKRSSSTSSSSVSSSSAATAAA 102

Query: 63  -GPDHNP--IRGYG-------GGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELG 122
             PD  P   R YG       G L+I GSFSSLL SNGQ+G+LLE ++PN   +K+M++G
Sbjct: 103 QNPDPQPDRTRVYGPKIDQDRGVLDISGSFSSLLTSNGQFGSLLEGLNPNGSGLKLMQMG 162

Query: 123 GFSGNLNSGSGRKS------AAEEQSGCVPENYLGVLQNGD-SSCWTGGGSNGWPDLAIF 173
            F  NL+SG+G  S        E QS   PE+Y+G LQNGD SSCW GG  NGWPDLAI+
Sbjct: 163 DFGVNLDSGNGLNSDPGVNPGLEAQSNGNPESYMG-LQNGDSSSCWNGG--NGWPDLAIY 222

[Close]
BLAST of Cp4.1LG02g14180 vs. TrEMBL
Match: A0A061GBW1_THECC (DOF zinc finger protein 1, putative OS=Theobroma cacao GN=TCM_029001 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.2e-39
Identity = 100/211 (47.39%), Postives = 126/211 (59.72%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKR------------------ 62
           PRHFCKNCRRYWTKGGALRNIPVGGG+RKN KR + S++                     
Sbjct: 44  PRHFCKNCRRYWTKGGALRNIPVGGGTRKNTKRSSSSSSSSSTNNPKRQPNPAPDPSRNP 103

Query: 63  -------PPSSSSSSSSGSMLNP---IAGPDHNPIRGYGGG--------LEIPGSFSSLL 122
                  PP+SSS+     +LN     +G + +P R Y           ++I GSFSSLL
Sbjct: 104 KLPDPSPPPTSSSTIPQQVVLNSGVRNSGSEGDPTRMYVWSVDHQDRKMMDIGGSFSSLL 163

Query: 123 ASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGSGRKSAAEEQSGCVP-----ENYLG 173
           +S+GQ+GNLLE ++PN P +K +++G F GNL+SG G         G        E+YLG
Sbjct: 164 SSSGQFGNLLEGLNPNGPGLKTVQMGEFVGNLDSGLGMNQGPSRDPGLGESNNNGESYLG 223

[Close]
BLAST of Cp4.1LG02g14180 vs. TrEMBL
Match: F6HY35_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g02490 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.4e-38
Identity = 102/181 (56.35%), Postives = 120/181 (66.30%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSG----SML 62
           PRHFCKNCRRYWTKGGALRNIPVGGGSRKN KR   S+  KRP SSSS+SS      S  
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKR---SSNPKRPSSSSSTSSVSSPPVSST 102

Query: 63  NPIAGPDHNPIRGYGGG-------LEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMEL 122
           +  A     P   Y          L+I GSFSSLLASNGQ+G+LLES++P    ++ + L
Sbjct: 103 SNAAAQKSEPSGIYVTAADQDRRMLDISGSFSSLLASNGQFGSLLESLNPT-GSVRGVPL 162

Query: 123 GGFSGNLNSGSGRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSY 173
             FS   NS SGR  A E QS    E++LG+ Q GDS+CW GG  NGWPDLAI+TPGS++
Sbjct: 163 SAFSETPNSDSGRTPAMELQSNGNSESFLGI-QTGDSNCWNGG--NGWPDLAIYTPGSTF 216

[Close]
BLAST of Cp4.1LG02g14180 vs. TrEMBL
Match: A0A0B5JL37_CAJCA (Dof protein OS=Cajanus cajan GN=Dof19 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.4e-35
Identity = 92/180 (51.11%), Postives = 119/180 (66.11%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGGSRKN KR + +A  KRP  S S SS+     P++
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKRSSNNA--KRPAPSPSPSSA-----PVS 102

Query: 63  GPD-----HNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGN 122
            PD      NP+      L + GSFSSLLAS+G  GNLLE ++ +   +K++++  F  N
Sbjct: 103 EPDPTRNHPNPVDQSTRMLSVGGSFSSLLASSGHLGNLLEGLNSSGSSLKIVQMEEFGEN 162

Query: 123 LNS-----GSGRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 173
           ++      GSGR    + QS    E++L  +QNGD+SCW   G+NGW +LAI+TPGSS+Q
Sbjct: 163 VSGQVVDPGSGRNPGLDMQSDGAAESFLS-MQNGDTSCW--NGTNGWSNLAIYTPGSSFQ 212

[Close]
BLAST of Cp4.1LG02g14180 vs. TAIR10
Match: AT1G51700.1 (AT1G51700.1 DOF zinc finger protein 1)

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-16
Identity = 54/104 (51.92%), Postives = 60/104 (57.69%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVS-------ATVKRPPSSSSSSSSG 62
           PRHFCKNCRRYWTKGGALRNIPVGGG+RK+ KR   S        TV   P    S S  
Sbjct: 56  PRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRSGSSPSSNLKNQTVAEKPDHHGSGSE- 115

Query: 63  SMLNPIAGPDHNPIR---GYGGGLEIPGSFSSLLASNGQYGNLL 97
                ++G + NP R   G   G     SFSSLLASN Q G L+
Sbjct: 116 EKEERVSGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQMGGLV 158

[Close]
BLAST of Cp4.1LG02g14180 vs. TAIR10
Match: AT3G21270.1 (AT3G21270.1 DOF zinc finger protein 2)

HSP 1 Score: 77.4 bits (189), Expect = 9.5e-15
Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCK+CRRYWTKGGALRN+PVGGGSRKNA + + S++     SS+SS S+ S      
Sbjct: 52  PRHFCKSCRRYWTKGGALRNVPVGGGSRKNATKRSTSSS-----SSASSPSNSSQNKKTK 111

Query: 63  GPDHNP 69
            PD +P
Sbjct: 112 NPDPDP 112

[Close]
BLAST of Cp4.1LG02g14180 vs. TAIR10
Match: AT3G50410.1 (AT3G50410.1 OBF binding protein 1)

HSP 1 Score: 71.6 bits (174), Expect = 5.2e-13
Identity = 65/211 (30.81%), Postives = 87/211 (41.23%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLN--- 62
           PRHFCK CRRYWT GG LR++PVGGG+RK+AKR    +      +SSSSS SG + N   
Sbjct: 53  PRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRSRTCS------NSSSSSVSGVVSNSNG 112

Query: 63  ------PIAGPDHNPIRGY----------GGGLEIPGSFSSLLASNGQYGNLLESMDPNQ 122
                 P+  P  +   G           G  L + GSF+S L ++              
Sbjct: 113 VPLQTTPVLFPQSSISNGVTHTVTESDGKGSALSLCGSFTSTLLNHNAAATATHGSG--- 172

Query: 123 PEMKMMELGGFSGNLNS-------GSGRKSAAEEQSGCVPENYLGV-------------- 171
               ++ +GGF   L S       G GR        G      +G               
Sbjct: 173 ---SVIGIGGFGIGLGSGFDDVSFGLGRAMWPFSTVGTATTTNVGSNGGHHAVPMPATWQ 232

[Close]
BLAST of Cp4.1LG02g14180 vs. TAIR10
Match: AT4G00940.1 (AT4G00940.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 71.2 bits (173), Expect = 6.8e-13
Identity = 45/107 (42.06%), Postives = 64/107 (59.81%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSM--LNP 62
           PR+ CK+CRRYWT+GG+LRN+PVGGGSRKN K P         P+SS+SSS+ ++  LNP
Sbjct: 91  PRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKKLPF--------PNSSTSSSTKNLPDLNP 150

Query: 63  -----IAGPDHNPIRGYGGGLEIPGSFSSLL---ASNGQYGNLLESM 100
                 +    NP + +    ++  SFSS +    + G YG+  E +
Sbjct: 151 PFVFTSSASSSNPSKTHQNNNDLSLSFSSPMQDKRAQGHYGHFSEQV 189

[Close]
BLAST of Cp4.1LG02g14180 vs. TAIR10
Match: AT1G07640.3 (AT1G07640.3 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 70.9 bits (172), Expect = 8.9e-13
Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCK CRRYWT+GGALRN+PVGGG R+N K+   +  +K   SSS  SSS +  +P +
Sbjct: 108 PRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKK-GKNGNLKSSSSSSKQSSSVNAQSPSS 167

Query: 63  G 64
           G
Sbjct: 168 G 167

[Close]
BLAST of Cp4.1LG02g14180 vs. NCBI nr
Match: gi|659093558|ref|XP_008447593.1| (PREDICTED: dof zinc finger protein DOF1.7-like [Cucumis melo])

HSP 1 Score: 278.1 bits (710), Expect = 1.0e-71
Identity = 141/170 (82.94%), Postives = 152/170 (89.41%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGG+RKN+KR AV+ATVKRPPSSSSS+      NPIA
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKR-AVAATVKRPPSSSSSTHP----NPIA 102

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
            PDHNPIRGYGGGL+IPGSFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG F     SGS
Sbjct: 103 VPDHNPIRGYGGGLDIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGS 162

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 173
           GRKSAAEEQS  VPENYLGVLQNGDS+CW+GGGSNGWPDLAIFTPGSSYQ
Sbjct: 163 GRKSAAEEQSATVPENYLGVLQNGDSNCWSGGGSNGWPDLAIFTPGSSYQ 202

[Close]
BLAST of Cp4.1LG02g14180 vs. NCBI nr
Match: gi|700204700|gb|KGN59833.1| (hypothetical protein Csa_3G849890 [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 1.3e-69
Identity = 138/170 (81.18%), Postives = 149/170 (87.65%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGG+RKN+KR AV+ATVKRPPSS+SS+      N I 
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKR-AVAATVKRPPSSTSSTHP----NTIT 102

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
            PDHNPIRGYGGGL+IPGSFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG FSG     S
Sbjct: 103 VPDHNPIRGYGGGLDIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEFSG-----S 162

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 173
           GRKSAAEEQS  VPENYLGVLQNGDS+CW GGGSNGWPDLAIFTPGSSYQ
Sbjct: 163 GRKSAAEEQSAGVPENYLGVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 202

[Close]
BLAST of Cp4.1LG02g14180 vs. NCBI nr
Match: gi|778688976|ref|XP_004146854.2| (PREDICTED: dof zinc finger protein DOF3.4-like [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 1.3e-69
Identity = 138/170 (81.18%), Postives = 149/170 (87.65%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGG+RKN+KR AV+ATVKRPPSS+SS+      N I 
Sbjct: 45  PRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKR-AVAATVKRPPSSTSSTHP----NTIT 104

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
            PDHNPIRGYGGGL+IPGSFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG FSG     S
Sbjct: 105 VPDHNPIRGYGGGLDIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEFSG-----S 164

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 173
           GRKSAAEEQS  VPENYLGVLQNGDS+CW GGGSNGWPDLAIFTPGSSYQ
Sbjct: 165 GRKSAAEEQSAGVPENYLGVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 204

[Close]
BLAST of Cp4.1LG02g14180 vs. NCBI nr
Match: gi|645244209|ref|XP_008228327.1| (PREDICTED: dof zinc finger protein DOF3.1-like [Prunus mume])

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-43
Identity = 109/187 (58.29%), Postives = 129/187 (68.98%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGG+LRNIPVGGGSRKN KR + SA+ +   +SSSS SS S     A
Sbjct: 43  PRHFCKNCRRYWTKGGSLRNIPVGGGSRKNTKRSSSSASKRSSSTSSSSVSSSSAATAAA 102

Query: 63  -GPDHNP--IRGYG-------GGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELG 122
             PD  P   R YG       G L+I GSFSSLL SNGQ+G+LLE ++PN   +K+M++G
Sbjct: 103 QNPDPQPDRTRVYGPKIDQDRGVLDISGSFSSLLTSNGQFGSLLEGLNPNGSGLKLMQMG 162

Query: 123 GFSGNLNSGSGRKS------AAEEQSGCVPENYLGVLQNGD-SSCWTGGGSNGWPDLAIF 173
            F  NL+SG+G  S        E QS   PE+Y+G LQNGD SSCW GG  NGWPDLAI+
Sbjct: 163 DFGVNLDSGNGLNSDPGVNPGLEAQSNGNPESYMG-LQNGDSSSCWNGG--NGWPDLAIY 222

[Close]
BLAST of Cp4.1LG02g14180 vs. NCBI nr
Match: gi|595942728|ref|XP_007215927.1| (hypothetical protein PRUPE_ppa011022mg [Prunus persica])

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-43
Identity = 109/187 (58.29%), Postives = 129/187 (68.98%), Query Frame = 1 

Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGG+LRNIPVGGGSRKN KR + SA+ +   +SSSS SS S     A
Sbjct: 43  PRHFCKNCRRYWTKGGSLRNIPVGGGSRKNTKRSSSSASKRSSSTSSSSVSSSSAATAAA 102

Query: 63  -GPDHNP--IRGYG-------GGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELG 122
             PD  P   R YG       G L+I GSFSSLL SNGQ+G+LLE ++PN   +K+M++G
Sbjct: 103 QNPDPQPDRTRVYGPKIDQDRGVLDISGSFSSLLTSNGQFGSLLEGLNPNGSGLKLMQMG 162

Query: 123 GFSGNLNSGSGRKS------AAEEQSGCVPENYLGVLQNGD-SSCWTGGGSNGWPDLAIF 173
            F  NL+SG+G  S        E QS   PE+Y+G LQNGD SSCW GG  NGWPDLAI+
Sbjct: 163 DFGVNLDSGNGLNSDPGVNPGLEAQSNGNPESYMG-LQNGDSSSCWNGG--NGWPDLAIY 222

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g14180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF17_ARATH3.1e-1551.92Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7 PE=2 SV=1[more]
DOF31_ARATH1.7e-1359.09Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2[more]
DOF34_ARATH9.3e-1230.81Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4 PE=1 SV=2[more]
DOF41_ARATH1.2e-1142.06Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1 PE=2 SV=2[more]
DOF11_ARATH1.6e-1157.38Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2[more]
BLAST of Cp4.1LG02g14180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDG2_CUCSA8.9e-7081.18Uncharacterized protein OS=Cucumis sativus GN=Csa_3G849890 PE=4 SV=1[more]
M5WV64_PRUPE1.1e-4358.29Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011022mg PE=4 SV=1[more]
A0A061GBW1_THECC6.2e-3947.39DOF zinc finger protein 1, putative OS=Theobroma cacao GN=TCM_029001 PE=4 SV=1[more]
F6HY35_VITVI2.4e-3856.35Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g02490 PE=4 SV=... [more]
A0A0B5JL37_CAJCA2.4e-3551.11Dof protein OS=Cajanus cajan GN=Dof19 PE=4 SV=1[more]
BLAST of Cp4.1LG02g14180 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G51700.11.7e-1651.92 DOF zinc finger protein 1[more]
AT3G21270.19.5e-1559.09 DOF zinc finger protein 2[more]
AT3G50410.15.2e-1330.81 OBF binding protein 1[more]
AT4G00940.16.8e-1342.06 Dof-type zinc finger DNA-binding family protein[more]
AT1G07640.38.9e-1357.38 Dof-type zinc finger DNA-binding family protein[more]
BLAST of Cp4.1LG02g14180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659093558|ref|XP_008447593.1|1.0e-7182.94PREDICTED: dof zinc finger protein DOF1.7-like [Cucumis melo][more]
gi|700204700|gb|KGN59833.1|1.3e-6981.18hypothetical protein Csa_3G849890 [Cucumis sativus][more]
gi|778688976|ref|XP_004146854.2|1.3e-6981.18PREDICTED: dof zinc finger protein DOF3.4-like [Cucumis sativus][more]
gi|645244209|ref|XP_008228327.1|1.6e-4358.29PREDICTED: dof zinc finger protein DOF3.1-like [Prunus mume][more]
gi|595942728|ref|XP_007215927.1|1.6e-4358.29hypothetical protein PRUPE_ppa011022mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g14180.1Cp4.1LG02g14180.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 3..35
score: 7.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 3..34
score: 6.3
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 1..34
score: 17
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 3..164
score: 3.9
NoneNo IPR availablePANTHERPTHR31992:SF23SUBFAMILY NOT NAMEDcoord: 3..164
score: 3.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g14180CmaCh14G012740Cucurbita maxima (Rimu)cmacpeB282
Cp4.1LG02g14180CmaCh01G000730Cucurbita maxima (Rimu)cmacpeB491
Cp4.1LG02g14180CmoCh14G013060Cucurbita moschata (Rifu)cmocpeB244
Cp4.1LG02g14180Cla012621Watermelon (97103) v1cpewmB557
Cp4.1LG02g14180Csa3G849890Cucumber (Chinese Long) v2cpecuB558
Cp4.1LG02g14180MELO3C013043Melon (DHL92) v3.5.1cpemeB518
Cp4.1LG02g14180ClCG07G013640Watermelon (Charleston Gray)cpewcgB524
Cp4.1LG02g14180CSPI03G41550Wild cucumber (PI 183967)cpecpiB560
Cp4.1LG02g14180Lsi07G005600Bottle gourd (USVL1VR-Ls)cpelsiB472
Cp4.1LG02g14180MELO3C013043.2Melon (DHL92) v3.6.1cpemedB616
Cp4.1LG02g14180CsaV3_3G043990Cucumber (Chinese Long) v3cpecucB0695
Cp4.1LG02g14180Bhi01G002578Wax gourdcpewgoB0680
Cp4.1LG02g14180CsGy3G039010Cucumber (Gy14) v2cgybcpeB389
Cp4.1LG02g14180Carg04300Silver-seed gourdcarcpeB0285
Cp4.1LG02g14180Carg06445Silver-seed gourdcarcpeB0175
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG02g14180Cp4.1LG03g14290Cucurbita pepo (Zucchini)cpecpeB451
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g14180Cucurbita pepo (Zucchini)cpecpeB122
Cp4.1LG02g14180Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG02g14180Cucurbita pepo (Zucchini)cpecpeB332
Cp4.1LG02g14180Cucurbita pepo (Zucchini)cpecpeB355
Cp4.1LG02g14180Cucurbita pepo (Zucchini)cpecpeB453
Cp4.1LG02g14180Cucurbita pepo (Zucchini)cpecpeB473
Cp4.1LG02g14180Cucumber (Gy14) v1cgycpeB0277
Cp4.1LG02g14180Cucumber (Gy14) v1cgycpeB0886
Cp4.1LG02g14180Cucumber (Gy14) v1cgycpeB0941
Cp4.1LG02g14180Cucurbita maxima (Rimu)cmacpeB399
Cp4.1LG02g14180Cucurbita maxima (Rimu)cmacpeB921
Cp4.1LG02g14180Cucurbita moschata (Rifu)cmocpeB120
Cp4.1LG02g14180Cucurbita moschata (Rifu)cmocpeB361
Cp4.1LG02g14180Cucurbita moschata (Rifu)cmocpeB449
Cp4.1LG02g14180Cucurbita moschata (Rifu)cmocpeB857
Cp4.1LG02g14180Wild cucumber (PI 183967)cpecpiB545
Cp4.1LG02g14180Wild cucumber (PI 183967)cpecpiB595
Cp4.1LG02g14180Cucumber (Chinese Long) v2cpecuB543
Cp4.1LG02g14180Cucumber (Chinese Long) v2cpecuB594
Cp4.1LG02g14180Bottle gourd (USVL1VR-Ls)cpelsiB450
Cp4.1LG02g14180Watermelon (Charleston Gray)cpewcgB481
Cp4.1LG02g14180Watermelon (Charleston Gray)cpewcgB494
Cp4.1LG02g14180Watermelon (Charleston Gray)cpewcgB505
Cp4.1LG02g14180Watermelon (97103) v1cpewmB534
Cp4.1LG02g14180Watermelon (97103) v1cpewmB554
Cp4.1LG02g14180Watermelon (97103) v1cpewmB583
Cp4.1LG02g14180Melon (DHL92) v3.5.1cpemeB504
Cp4.1LG02g14180Melon (DHL92) v3.5.1cpemeB527
Cp4.1LG02g14180Cucumber (Gy14) v2cgybcpeB094
Cp4.1LG02g14180Cucumber (Gy14) v2cgybcpeB225
Cp4.1LG02g14180Cucumber (Gy14) v2cgybcpeB953
Cp4.1LG02g14180Melon (DHL92) v3.6.1cpemedB596
Cp4.1LG02g14180Melon (DHL92) v3.6.1cpemedB601
Cp4.1LG02g14180Melon (DHL92) v3.6.1cpemedB626
Cp4.1LG02g14180Silver-seed gourdcarcpeB0140
Cp4.1LG02g14180Silver-seed gourdcarcpeB0813
Cp4.1LG02g14180Silver-seed gourdcarcpeB1053
Cp4.1LG02g14180Silver-seed gourdcarcpeB1429
Cp4.1LG02g14180Cucumber (Chinese Long) v3cpecucB0661
Cp4.1LG02g14180Cucumber (Chinese Long) v3cpecucB0678
Cp4.1LG02g14180Cucumber (Chinese Long) v3cpecucB0734
Cp4.1LG02g14180Wax gourdcpewgoB0730
Cp4.1LG02g14180Wax gourdcpewgoB0740