CsaV3_3G043990 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G043990
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionDof zinc finger protein like
Locationchr3 : 35884340 .. 35887250 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCATTGTTGGATTACTTTTTAATAAACAATTATGGGAGTCAGTTGGAGTGTCAAGAAGACAACAAACAAAGCTTATAGAGAGAAAGAGATTCGAATATAATAAAATTTAAAATAAATAAATAAAAAGATCTTCAAATTCTTCATTTCTTTATATATGTCGACTACTCGTCTCTTTCACGCGGATATCTCAACAAATTTCCTCCTCCCCGGAATATCACCCTTTCCCTTCCCCGTCGTCGTCCCCGGTAATTCTCCCTCTTTCCCACATCCAAAATCACACACACAAACAAAACAAAAAAAAAAAAAGTGGCAGTTGAGATTTTTGTGCTTTTCTTCTGTAAAATCGCATGCTTTTCCATTGATTTGCTTTTTGGAAGCCATGAAAGCTACGGCTTGAAGCTTTTCCTTTAACTTTTGTCGTTTGTTTTTTTTACTCTATTTGGTCTCTGTTTTTTTCTTACATCAAAAAACCCTTTTTTGTCTTCAAAATCTCCAAACCCTTTCTCGGTTCCCCATCTTAGATCACCCAAATTTCTTATTGAAAACCCAACCCAATTTTTCTCAGAAAAACAAACAATAGAGAGATTTTTTTTTCTAATTTTTGCTCTGTTTTTTTAAACAATGCAAGACCCATCAACGTTTCAGCCAATTAAACCACAATTTCCGGAACAAGAACAACTTAAGTGTCCTCGTTGTGATTCTACAAACACCAAATTTTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCATTTCTGTAAGAATTGCCGCCGCTATTGGACTAAAGGCGGCGCTCTTCGCAACATCCCCGTCGGCGGTGGCACCCGGAAAAACTCCAAGCGTGCGGTGGCTGCCACCGTCAAACGCCCGCCGTCTTCCACATCTTCGACGCATCCGAACACGATCACGGTGCCGGATCATAACCCGATCCGGGGTTACGGCGGTGGGCTGGATATTCCTGGGAGCTTCAGTTCGTTGCTGGCTTCAAATGGGCAATTCGGGAATCTTTTGGAGGGTGTTGATCCGAATCAATCGGAGGTGAAAATGGTGGAATTGGGGGAATTTTCTGGGTCTGGGAGGAAATCTGCGGCGGAGGAACAGAGCGCCGGCGTGCCAGAGAATTATTTGGGTGTTTTACAAAATGGTGATTCTAATTGTTGGAATGGCGGGGGTAGTAATGGGTGGCCTGATCTTGCGATTTTCACACCAGGGTCAAGTTATCAATAAGCAGAGAAGAGAATCCATTGTTTTATGGAATTTAAGCTTTTCAATGTGATGAAGATGATCATGGAAAATTAGAAAGATGAGATTAGAGAAGGAAGAAGAATAAGATGGTGGCACAGACACATTACAAGACCAACCACAACCATTAGACAATTCTATAGGTAAAAAGAAAAAAAAAGAAAGAAATTTTCTTGTTCTTGTGTGTTCTTGTTCTTTTTCTTTTTCTTTTCTTTTTTTTATATTTATTATTATTATTATTTTAATTTGATGTGTTTGGAACTTGTATGAATGAGAAAATAGAGAACAACCAAAAAGAGAGAGACAGACCTATAAACTAGAATTTGTTAATATTTTTACTTGCCACCATTATCAGATAGATCCAAAACTTTGGCAAGTGTGGAAATGTTGGGATTTTAGATTTGATAATATTATGTATAATATTCTTTCTAAACTCAAAATGTATTTTTTTTTCCAAATTCAAATTTTATAAAACCAACATTTAAAAAAAAAAAAAAAGACAAAGTATGTTTTATGTTTTCATTACTCTAAAGTTTCTTCTTTTAGTCTTATCCTTGTATGTGTGTGTGTGTGTGTGTTTTTTTTTCTTGGTAGGTGGTCTAATTTCTATTTTAGAAATTCTAGCTATTTCAAGAATAGTTTAAAAAGTACCCTTATACATAAGAGTATAGTTTACCTAATGTAGTAAAAGACAAATATAGATAAATATAGTGAATGTTTGCAAATCATATAGATTTTTTTTTGGTGTTAAGTTATAATAAATAGTATGGTTATTGTGGTAAAAGATTAGGAAGAGTGATAAAGAAAAAAGTAGTGAATATTAGAGATGTGAAAAAGAGAATGAAAGATGGATAAGAGTTTTAAAAATGAATGTGAAATGGTCCCAAAAATAAAATCATTAAATGAGAAGAGTTTGTTTTGATGGATAAATAGTAGTACAAAATGAGGTGGCAAAGAGTGACCAATGAGAGTTGGACAGATAAGGTGATAAGTGGTGTTGGCATTCATTCTTTTGATGGAGAAGGGTTCTAAAAGCTACAAATGCAATGTTTCTTTGTTTTCTTTCAATTTTTAAAAAGTTGGTTGCTTTTCTTTTTGGTTCATTTATCCATTTTGTGCTTACAATTCAATTGAGTTTTAGATTTTTTGTAAAAAAAAAAAACTTTGGGTTTGGTATAATAAAAGTATATGTTTATTTTCTTTCAATTTTTCGATTTTCGTGCACCTTCAATATGTGTCTTTAGTCCAAGGAATTGAAAAGTAGAAGTTGAAGTTTTTAACTCAAGGCTCTCGTTGGTCCAAAGAATTGACCTTCTTTGTTACCATATTTACATCGTGGCTCACAAATTGTACCCCTAAGCTTTATAACTCACACTTGTCACTATTTCAACTTCATTTGAGGGAAGGGAGTGTACTTCAAACATAACTATGATAATTTGAACAAACTATTATTTTCCTCTATCTTAATGGTAAAAAGTTGAATTCTTACCCAAATCTCAACAACAGACCTTTTTTAGTAAACCACTTTTAAAACAAAAATAAGAAATTTAGACTTGAAAGAAGTGTTTATAGCCTTTTAAGTTTTTTTAAAAAATAAAATGGTGGTCAAATTAGCTTAAAATAATTTTCAAAAGTAGAGATTCTAAGTATGTTAGGTGAAAACTAT

mRNA sequence

ATGCAAGACCCATCAACGTTTCAGCCAATTAAACCACAATTTCCGGAACAAGAACAACTTAAGTGTCCTCGTTGTGATTCTACAAACACCAAATTTTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCATTTCTGTAAGAATTGCCGCCGCTATTGGACTAAAGGCGGCGCTCTTCGCAACATCCCCGTCGGCGGTGGCACCCGGAAAAACTCCAAGCGTGCGGTGGCTGCCACCGTCAAACGCCCGCCGTCTTCCACATCTTCGACGCATCCGAACACGATCACGGTGCCGGATCATAACCCGATCCGGGGTTACGGCGGTGGGCTGGATATTCCTGGGAGCTTCAGTTCGTTGCTGGCTTCAAATGGGCAATTCGGGAATCTTTTGGAGGGTGTTGATCCGAATCAATCGGAGGTGAAAATGGTGGAATTGGGGGAATTTTCTGGGTCTGGGAGGAAATCTGCGGCGGAGGAACAGAGCGCCGGCGTGCCAGAGAATTATTTGGGTGTTTTACAAAATGGTGATTCTAATTGTTGGAATGGCGGGGGTAGTAATGGGTGGCCTGATCTTGCGATTTTCACACCAGGGTCAAGTTATCAATAA

Coding sequence (CDS)

ATGCAAGACCCATCAACGTTTCAGCCAATTAAACCACAATTTCCGGAACAAGAACAACTTAAGTGTCCTCGTTGTGATTCTACAAACACCAAATTTTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCATTTCTGTAAGAATTGCCGCCGCTATTGGACTAAAGGCGGCGCTCTTCGCAACATCCCCGTCGGCGGTGGCACCCGGAAAAACTCCAAGCGTGCGGTGGCTGCCACCGTCAAACGCCCGCCGTCTTCCACATCTTCGACGCATCCGAACACGATCACGGTGCCGGATCATAACCCGATCCGGGGTTACGGCGGTGGGCTGGATATTCCTGGGAGCTTCAGTTCGTTGCTGGCTTCAAATGGGCAATTCGGGAATCTTTTGGAGGGTGTTGATCCGAATCAATCGGAGGTGAAAATGGTGGAATTGGGGGAATTTTCTGGGTCTGGGAGGAAATCTGCGGCGGAGGAACAGAGCGCCGGCGTGCCAGAGAATTATTTGGGTGTTTTACAAAATGGTGATTCTAATTGTTGGAATGGCGGGGGTAGTAATGGGTGGCCTGATCTTGCGATTTTCACACCAGGGTCAAGTTATCAATAA

Protein sequence

MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSAGVPENYLGVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ
Homology
[Close]
BLAST of CsaV3_3G043990 vs. NCBI nr
Match: KGN59833.1 (hypothetical protein Csa_3G849890 [Cucumis sativus])

HSP 1 Score: 422.9 bits (1086), Expect = 6.0e-115
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 

Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSL 120
           RNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSL
Sbjct: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSL 120

Query: 121 LASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSAGVPENYLGVLQNGDSNC 180
           LASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSAGVPENYLGVLQNGDSNC
Sbjct: 121 LASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSAGVPENYLGVLQNGDSNC 180

Query: 181 WNGGGSNGWPDLAIFTPGSSYQ 203
           WNGGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 WNGGGSNGWPDLAIFTPGSSYQ 202

[Close]
BLAST of CsaV3_3G043990 vs. NCBI nr
Match: XP_008447593.1 (PREDICTED: dof zinc finger protein DOF1.7-like [Cucumis melo])

HSP 1 Score: 362.1 bits (928), Expect = 1.3e-96
Identity = 175/202 (86.63%), Postives = 176/202 (87.13%), Query Frame = 0 

Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSL 120
           RNIPVGG                       THPN I VPDHNPIRGYGGGLDIPGSFSSL
Sbjct: 61  RNIPVGGXXXXXXXXXXXXXXXXXXXXXXXTHPNPIAVPDHNPIRGYGGGLDIPGSFSSL 120

Query: 121 LASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSAGVPENYLGVLQNGDSNC 180
           LASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSA VPENYLGVLQNGDSNC
Sbjct: 121 LASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSATVPENYLGVLQNGDSNC 180

Query: 181 WNGGGSNGWPDLAIFTPGSSYQ 203
           W+GGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 WSGGGSNGWPDLAIFTPGSSYQ 202

[Close]
BLAST of CsaV3_3G043990 vs. NCBI nr
Match: XP_022948818.1 (dof zinc finger protein DOF1.7-like [Cucurbita moschata])

HSP 1 Score: 333.6 bits (854), Expect = 4.8e-88
Identity = 165/212 (77.83%), Postives = 175/212 (82.55%), Query Frame = 0 

Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTF  IKPQ+PEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQYPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHP-----NTITVPDHNPIRGYGGGLDIPG 120
           RNIPVGGG+RKN+KR   +                   N IT PDHNPIRGYGGGL+IPG
Sbjct: 61  RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPITGPDHNPIRGYGGGLEIPG 120

Query: 121 SFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGSGRKSAAEEQSAGVPENYL 180
           SFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG F     SGSGRKSAAEEQS  VPENYL
Sbjct: 121 SFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPENYL 180

Query: 181 GVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 203
           GVLQNGDS+CW GGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]
BLAST of CsaV3_3G043990 vs. NCBI nr
Match: XP_004146854.2 (PREDICTED: dof zinc finger protein DOF3.4-like [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 6.3e-88
Identity = 162/176 (92.05%), Postives = 169/176 (96.02%), Query Frame = 0 

Query: 27  STNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKRAVAATVKRPPS 86
           S++ ++  + + + S PRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKRAVAATVKRPPS
Sbjct: 29  SSSPEYHPFPSPSSSPPRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKRAVAATVKRPPS 88

Query: 87  STSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVEL 146
           STSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVEL
Sbjct: 89  STSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVEL 148

Query: 147 GEFSGSGRKSAAEEQSAGVPENYLGVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 203
           GEFSGSGRKSAAEEQSAGVPENYLGVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ
Sbjct: 149 GEFSGSGRKSAAEEQSAGVPENYLGVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 204

[Close]
BLAST of CsaV3_3G043990 vs. NCBI nr
Match: XP_023523362.1 (dof zinc finger protein DOF1.7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.8 bits (852), Expect = 8.2e-88
Identity = 165/212 (77.83%), Postives = 174/212 (82.08%), Query Frame = 0 

Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTF  IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHP-----NTITVPDHNPIRGYGGGLDIPG 120
           RNIPVGGG+RKN+KR   +                   N I  PDHNPIRGYGGGL+IPG
Sbjct: 61  RNIPVGGGSRKNAKRPAVSXXXXXXXXXXXXXXXXXMLNPIAGPDHNPIRGYGGGLEIPG 120

Query: 121 SFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGSGRKSAAEEQSAGVPENYL 180
           SFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG F     SGSGRKSAAEEQS  VPENYL
Sbjct: 121 SFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGSGRKSAAEEQSGCVPENYL 180

Query: 181 GVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 203
           GVLQNGDS+CW GGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 GVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]
BLAST of CsaV3_3G043990 vs. TAIR10
Match: AT1G51700.1 (DOF zinc finger protein 1)

HSP 1 Score: 147.5 bits (371), Expect = 8.8e-36
Identity = 82/135 (60.74%), Postives = 94/135 (69.63%), Query Frame = 0 

Query: 11  KPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 70
           +P+ PEQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR
Sbjct: 24  QPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83

Query: 71  KNSKRAVAA--------TVKRPP---SSTSSTHPNTITVPDHNPIRG-YGGGLDIP--GS 130
           K++KR+ ++        TV   P    S S      ++  + NP R  YG  +  P   S
Sbjct: 84  KSNKRSGSSPSSNLKNQTVAEKPDHHGSGSEEKEERVSGQEMNPTRMLYGLPVGDPNGAS 143

Query: 131 FSSLLASNGQFGNLL 132
           FSSLLASN Q G L+
Sbjct: 144 FSSLLASNMQMGGLV 158

[Close]
BLAST of CsaV3_3G043990 vs. TAIR10
Match: AT3G21270.1 (DOF zinc finger protein 2)

HSP 1 Score: 132.5 bits (332), Expect = 2.9e-31
Identity = 77/158 (48.73%), Postives = 88/158 (55.70%), Query Frame = 0 

Query: 1   MQDPSTF---------QPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCR 60
           MQDP+ +              QF EQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCK+CR
Sbjct: 1   MQDPAAYXXXXXXXXXXXXXXQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTKGGALRNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHPNTITV------------P 120
           RYWTKGGALRN+PVGGG+RKN+ +                                   P
Sbjct: 61  RYWTKGGALRNVPVGGGSRKNATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSQKP 120

Query: 121 DHNPIRGYGG---------GLDIPGSFSSLLASNGQFG 129
           D +P R   G         G++I GSFSSLLA+N Q G
Sbjct: 121 DLDPTRMLYGFPIGDQDVKGMEIGGSFSSLLANNMQLG 158

[Close]
BLAST of CsaV3_3G043990 vs. TAIR10
Match: AT3G50410.1 (OBF binding protein 1)

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 67/136 (49.26%), Postives = 82/136 (60.29%), Query Frame = 0 

Query: 12  PQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRK 71
           P   +QEQL CPRCDS+NTKFCYYNNYN SQPRHFCK CRRYWT GG LR++PVGGGTRK
Sbjct: 22  PISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRK 81

Query: 72  NSKR----------AVAATVKR-------------PPSSTSSTHPNTITVPDHNPIRGYG 125
           ++KR          +V+  V               P SS S+   +T+T  D     G G
Sbjct: 82  SAKRSRTCSNSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISNGVTHTVTESD-----GKG 141

[Close]
BLAST of CsaV3_3G043990 vs. TAIR10
Match: AT4G38000.1 (DNA binding with one finger 4.7)

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-27
Identity = 58/127 (45.67%), Postives = 78/127 (61.42%), Query Frame = 0 

Query: 11  KPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 70
           +P    Q  LKCPRCDS NTKFCYYNNY+LSQPRH+CKNCRRYWT+GGALRN+P+GG TR
Sbjct: 32  EPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTR 91

Query: 71  KNSKRAVAATVKRPPSSTSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSLLASNGQFGNL 130
             +K      +  PP  ++ T   +  +  ++P            S + ++ S+G F   
Sbjct: 92  NKNKPCSLQVISSPPLFSNGTSSASRELVRNHP------------STAMMMMSSGGFSGY 146

Query: 131 LEGVDPN 138
           +  +DPN
Sbjct: 152 MFPLDPN 146

[Close]
BLAST of CsaV3_3G043990 vs. TAIR10
Match: AT5G66940.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-26
Identity = 62/117 (52.99%), Postives = 72/117 (61.54%), Query Frame = 0 

Query: 16  EQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKR 75
           +QEQL CPRC+STNTKFCYYNNYN SQPRHFCK+CRRYWT GG LR+IPVGG +RK+SKR
Sbjct: 28  QQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKR 87

Query: 76  ----AVAATVKRPPSSTSSTHPNTITVPDHNPIRGY----GGGLDIPGSFSSLLASN 125
               + AAT     S         +  P  +   G     G      G FSSL+  N
Sbjct: 88  SRTYSSAATTSVVGSRNFPLQATPVLFPQSSSNGGITTAKGSASSFYGGFSSLINYN 144

[Close]
BLAST of CsaV3_3G043990 vs. Swiss-Prot
Match: sp|O82155|DOF17_ARATH (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-34
Identity = 82/135 (60.74%), Postives = 94/135 (69.63%), Query Frame = 0 

Query: 11  KPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 70
           +P+ PEQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR
Sbjct: 24  QPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83

Query: 71  KNSKRAVAA--------TVKRPP---SSTSSTHPNTITVPDHNPIRG-YGGGLDIP--GS 130
           K++KR+ ++        TV   P    S S      ++  + NP R  YG  +  P   S
Sbjct: 84  KSNKRSGSSPSSNLKNQTVAEKPDHHGSGSEEKEERVSGQEMNPTRMLYGLPVGDPNGAS 143

Query: 131 FSSLLASNGQFGNLL 132
           FSSLLASN Q G L+
Sbjct: 144 FSSLLASNMQMGGLV 158

[Close]
BLAST of CsaV3_3G043990 vs. Swiss-Prot
Match: sp|Q94AR6|DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 5.3e-30
Identity = 77/158 (48.73%), Postives = 88/158 (55.70%), Query Frame = 0 

Query: 1   MQDPSTF---------QPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCR 60
           MQDP+ +              QF EQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCK+CR
Sbjct: 1   MQDPAAYXXXXXXXXXXXXXXQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTKGGALRNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHPNTITV------------P 120
           RYWTKGGALRN+PVGGG+RKN+ +                                   P
Sbjct: 61  RYWTKGGALRNVPVGGGSRKNATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSQKP 120

Query: 121 DHNPIRGYGG---------GLDIPGSFSSLLASNGQFG 129
           D +P R   G         G++I GSFSSLLA+N Q G
Sbjct: 121 DLDPTRMLYGFPIGDQDVKGMEIGGSFSSLLANNMQLG 158

[Close]
BLAST of CsaV3_3G043990 vs. Swiss-Prot
Match: sp|Q39088|DOF34_ARATH (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 2.1e-26
Identity = 67/136 (49.26%), Postives = 82/136 (60.29%), Query Frame = 0 

Query: 12  PQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRK 71
           P   +QEQL CPRCDS+NTKFCYYNNYN SQPRHFCK CRRYWT GG LR++PVGGGTRK
Sbjct: 22  PISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRK 81

Query: 72  NSKR----------AVAATVKR-------------PPSSTSSTHPNTITVPDHNPIRGYG 125
           ++KR          +V+  V               P SS S+   +T+T  D     G G
Sbjct: 82  SAKRSRTCSNSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISNGVTHTVTESD-----GKG 141

[Close]
BLAST of CsaV3_3G043990 vs. Swiss-Prot
Match: sp|Q84K52|DOF47_ARATH (Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana OX=3702 GN=DOF4.7 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.6e-26
Identity = 58/127 (45.67%), Postives = 78/127 (61.42%), Query Frame = 0 

Query: 11  KPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 70
           +P    Q  LKCPRCDS NTKFCYYNNY+LSQPRH+CKNCRRYWT+GGALRN+P+GG TR
Sbjct: 32  EPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTR 91

Query: 71  KNSKRAVAATVKRPPSSTSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSLLASNGQFGNL 130
             +K      +  PP  ++ T   +  +  ++P            S + ++ S+G F   
Sbjct: 92  NKNKPCSLQVISSPPLFSNGTSSASRELVRNHP------------STAMMMMSSGGFSGY 146

Query: 131 LEGVDPN 138
           +  +DPN
Sbjct: 152 MFPLDPN 146

[Close]
BLAST of CsaV3_3G043990 vs. Swiss-Prot
Match: sp|Q6Z345|DOF4_ORYSJ (Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.9e-25
Identity = 48/57 (84.21%), Postives = 52/57 (91.23%), Query Frame = 0 

Query: 15 PEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRK 72
          P  E +KCPRC+STNTKFCYYNNYNLSQPRHFCK+CRRYWTKGG LRN+PVGGG RK
Sbjct: 40 PSPEAVKCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRK 96

[Close]
BLAST of CsaV3_3G043990 vs. TrEMBL
Match: tr|A0A0A0LDG2|A0A0A0LDG2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G849890 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 4.0e-115
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 

Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSL 120
           RNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSL
Sbjct: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSL 120

Query: 121 LASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSAGVPENYLGVLQNGDSNC 180
           LASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSAGVPENYLGVLQNGDSNC
Sbjct: 121 LASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSAGVPENYLGVLQNGDSNC 180

Query: 181 WNGGGSNGWPDLAIFTPGSSYQ 203
           WNGGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 WNGGGSNGWPDLAIFTPGSSYQ 202

[Close]
BLAST of CsaV3_3G043990 vs. TrEMBL
Match: tr|A0A1S3BHT0|A0A1S3BHT0_CUCME (dof zinc finger protein DOF1.7-like OS=Cucumis melo OX=3656 GN=LOC103490008 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 8.3e-97
Identity = 175/202 (86.63%), Postives = 176/202 (87.13%), Query Frame = 0 

Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSL 120
           RNIPVGG                       THPN I VPDHNPIRGYGGGLDIPGSFSSL
Sbjct: 61  RNIPVGGXXXXXXXXXXXXXXXXXXXXXXXTHPNPIAVPDHNPIRGYGGGLDIPGSFSSL 120

Query: 121 LASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSAGVPENYLGVLQNGDSNC 180
           LASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSA VPENYLGVLQNGDSNC
Sbjct: 121 LASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSATVPENYLGVLQNGDSNC 180

Query: 181 WNGGGSNGWPDLAIFTPGSSYQ 203
           W+GGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 WSGGGSNGWPDLAIFTPGSSYQ 202

[Close]
BLAST of CsaV3_3G043990 vs. TrEMBL
Match: tr|A0A1U8ALW5|A0A1U8ALW5_NELNU (dof zinc finger protein DOF3.1-like OS=Nelumbo nucifera OX=4432 GN=LOC104604417 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.3e-62
Identity = 134/220 (60.91%), Postives = 154/220 (70.00%), Query Frame = 0 

Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPSTFQP+KP FPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPVKPHFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRAV-------------AATVKRPPSSTSSTHPNTITVPDHNPIRGY 120
           RNIPVGGG+RKN+KR               AA  K  P+ T S    TI   DH+     
Sbjct: 61  RNIPVGGGSRKNTKRXXXXXXXXXXXXXQNAAVPKPEPTGTFSPPVTTI---DHDRRM-- 120

Query: 121 GGGLDIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGSGRKSAAEEQS 180
              LDI GSFSSLLASNGQ GNLL+G++P+ S  + ++ GEF     S S   S  E Q 
Sbjct: 121 ---LDISGSFSSLLASNGQMGNLLDGLNPSSSGTRTLQFGEFAENSNSSSIENSTLELQG 180

Query: 181 AGVPENYLGVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 203
               E++LG+ Q+GDS+CW  G  NGWPDLAI+TPGS++Q
Sbjct: 181 NNNQESFLGI-QDGDSSCW--GSGNGWPDLAIYTPGSTFQ 209

[Close]
BLAST of CsaV3_3G043990 vs. TrEMBL
Match: tr|A0A2R6QFH2|A0A2R6QFH2_ACTCH (Dof zinc finger protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc17709 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 9.6e-61
Identity = 126/211 (59.72%), Postives = 148/211 (70.14%), Query Frame = 0 

Query: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPST+Q I+PQFPE E LKCPRCDSTNTKFCYYNNYNLSQPRH+CKNCRRYWTKGGAL
Sbjct: 1   MQDPSTYQQIQPQFPEHEHLKCPRCDSTNTKFCYYNNYNLSQPRHYCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHPNTITVPDHNPIRGYGGG---------L 120
           RNIPVGGG+RKN+KR  ++  KRP              P  +P   YG           L
Sbjct: 61  RNIPVGGGSRKNTKR--SSNPKRP-------------TPKPDPSGAYGSPSAFDQDRRIL 120

Query: 121 DIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEFSGSGRKSAAEEQSAGVPENYLG 180
           D  GSFSSLL  NGQFGNLLEG++PN S  ++ E GE     R    E QS+   E++LG
Sbjct: 121 DSGGSFSSLL--NGQFGNLLEGLNPNGSAGQLGEFGENPNLTRNPQIELQSSENAESFLG 180

Query: 181 VLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 203
           V   GDS+CW+GGG NGWP+L+I+TPGS++Q
Sbjct: 181 VENGGDSSCWDGGGGNGWPNLSIYTPGSTFQ 194

[Close]
BLAST of CsaV3_3G043990 vs. TrEMBL
Match: tr|A0A2N9HU28|A0A2N9HU28_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43095 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-59
Identity = 132/229 (57.64%), Postives = 151/229 (65.94%), Query Frame = 0 

Query: 1   MQDP-STFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGA 60
           MQDP +TF P+KP FPEQEQLKCPRC+S NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGA
Sbjct: 1   MQDPAATFHPVKPHFPEQEQLKCPRCESANTKFCYYNNYNLSQPRHFCKNCRRYWTKGGA 60

Query: 61  LRNIPVGGGTRKNSKRAVAATVKRPPSSTSSTHPNTITV------PDHNPIRGYGGG--- 120
           LRNIPVGGG+RKN+                                +H+P R YG G   
Sbjct: 61  LRNIPVGGGSRKNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPGQEHDPARIYGVGAPV 120

Query: 121 ------LDIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----------SGSG 180
                 LDI GSFSSLL SNGQFG+LLEG++PN S+VKM ++G+F           +GSG
Sbjct: 121 DQDHRMLDITGSFSSLLTSNGQFGSLLEGLNPNGSDVKMSQMGDFAENLNSGRVLDTGSG 180

Query: 181 RKSAAEEQSAGVPENYLGVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 203
           R    E QS    E+YLG LQNGDS+ W   G+NGWPDLAI+TPGSS Q
Sbjct: 181 RNPGMEVQSNSNSESYLG-LQNGDSSYW--AGANGWPDLAIYTPGSSLQ 226

The following BLAST results are available for this feature:
BLAST of CsaV3_3G043990 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59833.16.0e-115100.00hypothetical protein Csa_3G849890 [Cucumis sativus][more]
XP_008447593.11.3e-9686.63PREDICTED: dof zinc finger protein DOF1.7-like [Cucumis melo][more]
XP_022948818.14.8e-8877.83dof zinc finger protein DOF1.7-like [Cucurbita moschata][more]
XP_004146854.26.3e-8892.05PREDICTED: dof zinc finger protein DOF3.4-like [Cucumis sativus][more]
XP_023523362.18.2e-8877.83dof zinc finger protein DOF1.7-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_3G043990 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G51700.18.8e-3660.74DOF zinc finger protein 1[more]
AT3G21270.12.9e-3148.73DOF zinc finger protein 2[more]
AT3G50410.11.2e-2749.26OBF binding protein 1[more]
AT4G38000.12.0e-2745.67DNA binding with one finger 4.7[more]
AT5G66940.12.8e-2652.99Dof-type zinc finger DNA-binding family protein[more]
BLAST of CsaV3_3G043990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O82155|DOF17_ARATH1.6e-3460.74Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV... [more]
sp|Q94AR6|DOF31_ARATH5.3e-3048.73Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV... [more]
sp|Q39088|DOF34_ARATH2.1e-2649.26Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV... [more]
sp|Q84K52|DOF47_ARATH3.6e-2645.67Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana OX=3702 GN=DOF4.7 PE=1 SV... [more]
sp|Q6Z345|DOF4_ORYSJ3.9e-2584.21Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 ... [more]
BLAST of CsaV3_3G043990 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LDG2|A0A0A0LDG2_CUCSA4.0e-115100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G849890 PE=4 SV=1[more]
tr|A0A1S3BHT0|A0A1S3BHT0_CUCME8.3e-9786.63dof zinc finger protein DOF1.7-like OS=Cucumis melo OX=3656 GN=LOC103490008 PE=4... [more]
tr|A0A1U8ALW5|A0A1U8ALW5_NELNU1.3e-6260.91dof zinc finger protein DOF3.1-like OS=Nelumbo nucifera OX=4432 GN=LOC104604417 ... [more]
tr|A0A2R6QFH2|A0A2R6QFH2_ACTCH9.6e-6159.72Dof zinc finger protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN... [more]
tr|A0A2N9HU28|A0A2N9HU28_FAGSY1.1e-5957.64Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43095 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:1901576 organic substance biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G043990.1CsaV3_3G043990.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 18..74
e-value: 1.5E-33
score: 114.7
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 22..58
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 11..75
e-value: 1.0E-30
score: 331.0
IPR003851Zinc finger, Dof-typePROSITEPS50884ZF_DOF_2coord: 20..74
score: 29.571
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..100
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 1..199
NoneNo IPR availablePANTHERPTHR31992:SF23DOF ZINC FINGER PROTEIN DOF3.1coord: 1..199

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G043990CSPI03G41550Wild cucumber (PI 183967)cpicucB145
CsaV3_3G043990Cucsa.341290Cucumber (Gy14) v1cgycucB523
CsaV3_3G043990CmaCh01G000730Cucurbita maxima (Rimu)cmacucB0538
CsaV3_3G043990CmaCh14G012740Cucurbita maxima (Rimu)cmacucB0283
CsaV3_3G043990CmoCh14G013060Cucurbita moschata (Rifu)cmocucB0274
CsaV3_3G043990Cp4.1LG02g14180Cucurbita pepo (Zucchini)cpecucB0695
CsaV3_3G043990Cp4.1LG03g14290Cucurbita pepo (Zucchini)cpecucB0751
CsaV3_3G043990CsGy3G039010Cucumber (Gy14) v2cgybcucB117
CsaV3_3G043990Carg06445Silver-seed gourdcarcucB0134
CsaV3_3G043990Carg04300Silver-seed gourdcarcucB0226
CsaV3_3G043990Cla012621Watermelon (97103) v1cucwmB224
CsaV3_3G043990MELO3C013043Melon (DHL92) v3.5.1cucmeB223
CsaV3_3G043990ClCG07G013640Watermelon (Charleston Gray)cucwcgB262
CsaV3_3G043990Lsi07G005600Bottle gourd (USVL1VR-Ls)cuclsiB254
CsaV3_3G043990MELO3C013043.2Melon (DHL92) v3.6.1cucmedB216
CsaV3_3G043990Cla97C07G140450Watermelon (97103) v2cucwmbB242
CsaV3_3G043990Bhi01G002578Wax gourdcucwgoB279
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G043990Cucumber (Chinese Long) v3cuccucB155
CsaV3_3G043990Silver-seed gourdcarcucB1071
CsaV3_3G043990Cucumber (Gy14) v2cgybcucB327
CsaV3_3G043990Cucumber (Gy14) v1cgycucB546
CsaV3_3G043990Cucurbita maxima (Rimu)cmacucB0426
CsaV3_3G043990Cucurbita maxima (Rimu)cmacucB1056
CsaV3_3G043990Cucurbita moschata (Rifu)cmocucB0421
CsaV3_3G043990Cucurbita moschata (Rifu)cmocucB0523
CsaV3_3G043990Cucurbita moschata (Rifu)cmocucB1038
CsaV3_3G043990Cucurbita pepo (Zucchini)cpecucB0155
CsaV3_3G043990Cucurbita pepo (Zucchini)cpecucB0380
CsaV3_3G043990Wild cucumber (PI 183967)cpicucB394
CsaV3_3G043990Bottle gourd (USVL1VR-Ls)cuclsiB190
CsaV3_3G043990Melon (DHL92) v3.5.1cucmeB185
CsaV3_3G043990Melon (DHL92) v3.6.1cucmedB176
CsaV3_3G043990Watermelon (Charleston Gray)cucwcgB190
CsaV3_3G043990Watermelon (97103) v1cucwmB201
CsaV3_3G043990Watermelon (97103) v2cucwmbB260
CsaV3_3G043990Wax gourdcucwgoB349