Carg04262 (gene) Silver-seed gourd

NameCarg04262
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionMucin-5AC like
LocationCucurbita_argyrosperma_scaffold_044 : 1099040 .. 1099537 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGCAGCAGAAGAACACCAATCCAAACCAGGTCTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCTGGACTCGAGGACTGTGCCCTTCCTCCCGATTCTATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCTATCAAATCCACGGCCACCGCCTTTCTTTCCTCCGACGACGGCGAAGATTCCGATGGCTACGGTGTCGAGGATAACTGGTCGCCTACTGCGTCTCTACCTACCGATGTCGTCACTGGAATCTTGCCGGAACTGGATCCTCCGGCAGCTTGCGCGACGGATAAGGGATTGAAACTGCCGGAGTTTAATGTCGATGGGGTCGTAGTAGGGGGAATGGAGGAGAGGAGAGGAAAGGGTTGTGTGGTAGATGTATTGGAAGGGTTGGAGGTTGGAGATGAAGCCAAGAAGAAGAAGAAGAGCGGTGAAGAAGAAGAGCAACCTATTTTAGCGGAAGGTTTTGCTTTAAATTCTGCAGTTTAA

mRNA sequence

ATGGACGCAGCAGAAGAACACCAATCCAAACCAGGTCTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCTGGACTCGAGGACTGTGCCCTTCCTCCCGATTCTATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCTATCAAATCCACGGCCACCGCCTTTCTTTCCTCCGACGACGGCGAAGATTCCGATGGCTACGGTGTCGAGGATAACTGGTCGCCTACTGCGTCTCTACCTACCGATGTCGTCACTGGAATCTTGCCGGAACTGGATCCTCCGGCAGCTTGCGCGACGGATAAGGGATTGAAACTGCCGGAGTTTAATGTCGATGGGGTCGTAGTAGGGGGAATGGAGGAGAGGAGAGGAAAGGGTTGTGTGGTAGATGTATTGGAAGGGTTGGAGGTTGGAGATGAAGCCAAGAAGAAGAAGAAGAGCGGTGAAGAAGAAGAGCAACCTATTTTAGCGGAAGGTTTTGCTTTAAATTCTGCAGTTTAA

Coding sequence (CDS)

ATGGACGCAGCAGAAGAACACCAATCCAAACCAGGTCTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCTGGACTCGAGGACTGTGCCCTTCCTCCCGATTCTATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCTATCAAATCCACGGCCACCGCCTTTCTTTCCTCCGACGACGGCGAAGATTCCGATGGCTACGGTGTCGAGGATAACTGGTCGCCTACTGCGTCTCTACCTACCGATGTCGTCACTGGAATCTTGCCGGAACTGGATCCTCCGGCAGCTTGCGCGACGGATAAGGGATTGAAACTGCCGGAGTTTAATGTCGATGGGGTCGTAGTAGGGGGAATGGAGGAGAGGAGAGGAAAGGGTTGTGTGGTAGATGTATTGGAAGGGTTGGAGGTTGGAGATGAAGCCAAGAAGAAGAAGAAGAGCGGTGAAGAAGAAGAGCAACCTATTTTAGCGGAAGGTTTTGCTTTAAATTCTGCAGTTTAA

Protein sequence

MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDDGEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEERRGKGCVVDVLEGLEVGDEAKKKKKSGEEEEQPILAEGFALNSAV
BLAST of Carg04262 vs. NCBI nr
Match: XP_022949149.1 (uncharacterized protein LOC111452587 [Cucurbita moschata])

HSP 1 Score: 303.1 bits (775), Expect = 5.6e-79
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0

Query: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60
           MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD
Sbjct: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60

Query: 61  GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEE 120
           GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEE
Sbjct: 61  GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEE 120

Query: 121 RRGKGCVVDVLEGLEVGDEAXXXXXXXXXXXXPILAEGFALNSAV 166
           RRGKGCVVDVLEGLEVGDEAXXXXXXXXXXXXPILAEGFALNSAV
Sbjct: 121 RRGKGCVVDVLEGLEVGDEAXXXXXXXXXXXXPILAEGFALNSAV 165

BLAST of Carg04262 vs. NCBI nr
Match: XP_023523630.1 (uncharacterized protein LOC111787807 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.7 bits (761), Expect = 2.4e-77
Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 0

Query: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60
           MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD
Sbjct: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60

Query: 61  GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEE 120
           G+DSDGYGVEDNWSP ASLPTDVVTGILPELDPPAACATDKGLKLPEF+VDGVVVGGMEE
Sbjct: 61  GDDSDGYGVEDNWSPIASLPTDVVTGILPELDPPAACATDKGLKLPEFDVDGVVVGGMEE 120

Query: 121 RRGKGCVVDVLEGLEVGDEAXXXXXXXXXXXXPILAEGFALNSAV 166
           RRGKGCVVDVLEGLEVGDEAXXXXXXXXXXXXPILAEGFALNSAV
Sbjct: 121 RRGKGCVVDVLEGLEVGDEAXXXXXXXXXXXXPILAEGFALNSAV 165

BLAST of Carg04262 vs. NCBI nr
Match: XP_022998076.1 (uncharacterized protein LOC111492831 [Cucurbita maxima])

HSP 1 Score: 262.7 bits (670), Expect = 8.4e-67
Identity = 129/140 (92.14%), Postives = 134/140 (95.71%), Query Frame = 0

Query: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60
           MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSI EAFFKAASAIKSTAT FLSSD+
Sbjct: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSICEAFFKAASAIKSTATGFLSSDE 60

Query: 61  GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEE 120
           G+DSDGYGVED WSPTA+L TDVVTGI PELDPPAACATDKGLKLPEF++DGVVVGGMEE
Sbjct: 61  GDDSDGYGVEDKWSPTAALSTDVVTGIWPELDPPAACATDKGLKLPEFDLDGVVVGGMEE 120

Query: 121 RRGKGCVVDVLEGLEVGDEA 141
           RRGKGC VDVLEGLEVGDEA
Sbjct: 121 RRGKGCAVDVLEGLEVGDEA 140

BLAST of Carg04262 vs. NCBI nr
Match: XP_008447517.1 (PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 2.7e-49
Identity = 108/160 (67.50%), Postives = 116/160 (72.50%), Query Frame = 0

Query: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60
           MDAAE H  +P  FDQILPPRLEDAGLED ALPPDSIREAFFKAASA+KS ATA LS   
Sbjct: 1   MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLS--- 60

Query: 61  GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEE 120
               D       WSPT++LPTD+VTGILP+ D PA CAT KGLKLPEF  D VV+GGMEE
Sbjct: 61  ---PDXXXXXXPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEE 120

Query: 121 RRGKGCVVDVLEGLEVGDEAXXXXXXXXXXXXPILAEGFA 161
           RRGK CVVD LEGLE+GDEA            PIL EGFA
Sbjct: 121 RRGKACVVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 154

BLAST of Carg04262 vs. NCBI nr
Match: XP_022153664.1 (uncharacterized protein LOC111021118 [Momordica charantia])

HSP 1 Score: 180.6 bits (457), Expect = 4.2e-42
Identity = 103/178 (57.87%), Postives = 119/178 (66.85%), Query Frame = 0

Query: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60
           MDAAE+ + K GLFD+ILPPRLEDAGLEDCALPPDSIREAF KAASA+KS AT+ LS   
Sbjct: 1   MDAAEKLKPKAGLFDEILPPRLEDAGLEDCALPPDSIREAFAKAASAVKSRATSILS--- 60

Query: 61  GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVV----- 120
              SDG+ VED     A   TDVVTGI PE DPP  CAT KG KLPEF  D +V+     
Sbjct: 61  ---SDGHCVEDPRPADAGESTDVVTGISPERDPPGPCATAKGAKLPEFGGDAMVIGGGEG 120

Query: 121 ---------GGMEERRGKGCVVDVLEGLEVGDEAXXXXXXXXXXXXPILAEGFALNSA 165
                    GG E+RRG+GCVVDVL+GLE+G++A            PIL EGFA N++
Sbjct: 121 RGDEVVAVAGGTEKRRGQGCVVDVLQGLEIGEDA----KEKDKSGGPILGEGFASNNS 168

BLAST of Carg04262 vs. TAIR10
Match: AT1G15230.1 (unknown protein)

HSP 1 Score: 81.3 bits (199), Expect = 6.3e-16
Identity = 73/162 (45.06%), Postives = 90/162 (55.56%), Query Frame = 0

Query: 5   EEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDDGEDS 64
           E  + + GL D ILPP L DAGLEDCALPP+SI+EAF KAA+A+KS A +     D E+ 
Sbjct: 2   EATKERVGLLDTILPPALADAGLEDCALPPESIQEAFRKAANAVKSRAASIF---DHEEE 61

Query: 65  DGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGL-KLPEFNVDGVVVGGMEERRG 124
           DG   +    P       ++ G   E D    C   KG+ KL E    G +V   E   G
Sbjct: 62  DGCLAD----PIPETADKIIVGGDNERD-TGPCLAGKGIEKLAESKQAGDLVVAGEGEEG 121

Query: 125 KGCVVDVLEGLEV------GDEAXXXXXXXXXXXXPILAEGF 160
           K C VD L+ L+V       ++ XXXXXXXXXX  PIL EGF
Sbjct: 122 KSC-VDGLKDLDVEGIERSSEKXXXXXXXXXXXMKPILVEGF 154

BLAST of Carg04262 vs. TrEMBL
Match: tr|A0A1S3BI85|A0A1S3BI85_CUCME (uncharacterized protein LOC103489947 OS=Cucumis melo OX=3656 GN=LOC103489947 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.8e-49
Identity = 108/160 (67.50%), Postives = 116/160 (72.50%), Query Frame = 0

Query: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60
           MDAAE H  +P  FDQILPPRLEDAGLED ALPPDSIREAFFKAASA+KS ATA LS   
Sbjct: 1   MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLS--- 60

Query: 61  GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEE 120
               D       WSPT++LPTD+VTGILP+ D PA CAT KGLKLPEF  D VV+GGMEE
Sbjct: 61  ---PDXXXXXXPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEE 120

Query: 121 RRGKGCVVDVLEGLEVGDEAXXXXXXXXXXXXPILAEGFA 161
           RRGK CVVD LEGLE+GDEA            PIL EGFA
Sbjct: 121 RRGKACVVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 154

BLAST of Carg04262 vs. TrEMBL
Match: tr|A0A0A0LDD6|A0A0A0LDD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483800 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.4e-41
Identity = 101/160 (63.12%), Postives = 110/160 (68.75%), Query Frame = 0

Query: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60
           MDAAE H  +P  F QILPPRLEDAGLED ALPPDSIREAFFKAASA+KS ATA LS  D
Sbjct: 1   MDAAEHHNPQPSFFHQILPPRLEDAGLEDSALPPDSIREAFFKAASAVKSRATARLSHSD 60

Query: 61  GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEE 120
            ED D        SPT++LPTD         D PA CAT KGL+LPEF  D VV+GGMEE
Sbjct: 61  DEDDD-----VPCSPTSALPTDE--------DAPAICATKKGLELPEFGKDEVVIGGMEE 120

Query: 121 RRGKGCVVDVLEGLEVGDEAXXXXXXXXXXXXPILAEGFA 161
           RRGKGCVVD LEGLE+GD+A            P+L EGFA
Sbjct: 121 RRGKGCVVDGLEGLEIGDDA-EKESGKEEKKKPVLGEGFA 146

BLAST of Carg04262 vs. TrEMBL
Match: tr|W9REE4|W9REE4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026204 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.7e-28
Identity = 78/150 (52.00%), Postives = 95/150 (63.33%), Query Frame = 0

Query: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60
           M+AAEE     GL  QILPPRLEDAGLEDCALPPDSI+EAF KAA+ +KS A + L SD+
Sbjct: 1   MEAAEEQGR--GLLHQILPPRLEDAGLEDCALPPDSIKEAFIKAATVVKSRAASILYSDE 60

Query: 61  GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGG--- 120
            ED+DG  V+D W P A   +DVV G+ PE + P  CAT+ G    E   D V VGG   
Sbjct: 61  DEDADGDCVKDPW-PDAKDRSDVVVGVSPEGEAPGPCATENGTGAAEIGGDDVAVGGGDE 120

Query: 121 ---------MEERRGKGCVVDVLEGLEVGD 139
                     +E+ GK C V+ L+GLE+GD
Sbjct: 121 LEDKVVVGSEDEKGGKDC-VEGLQGLEIGD 146

BLAST of Carg04262 vs. TrEMBL
Match: tr|A0A2I4GZJ7|A0A2I4GZJ7_9ROSI (uncharacterized protein LOC109012252 OS=Juglans regia OX=51240 GN=LOC109012252 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.3e-25
Identity = 83/185 (44.86%), Postives = 103/185 (55.68%), Query Frame = 0

Query: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60
           M+AA+E ++  GL  QILPPR+EDAGLEDCALPPDSI+EAF KAA+A+KS A +  ++ D
Sbjct: 1   MEAAKEREA--GLLHQILPPRIEDAGLEDCALPPDSIKEAFLKAATAVKSRAASIFTTSD 60

Query: 61  GED-----SDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEF-NVDGVV 120
            E+     S+G  V+D W   A    D V    PE + P  CATDKG  +P     D VV
Sbjct: 61  DEETVTSFSEGDCVKDPWPSAAKGTQDTVVAASPEHEAPGPCATDKGSGVPGVGGDDAVV 120

Query: 121 VGG---MEER--------------RGKGCVVDVLEGLEVGDEA--XXXXXXXXXXXXPIL 161
           VGG   +EER               GK C V+ LEGLE+GD+               P L
Sbjct: 121 VGGESDVEERGDKVVVGVEEIAGTEGKAC-VEGLEGLEIGDKVKNGEGDDERGDEKKPTL 180

BLAST of Carg04262 vs. TrEMBL
Match: tr|A0A2C9W268|A0A2C9W268_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G128500 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.5e-24
Identity = 88/185 (47.57%), Postives = 112/185 (60.54%), Query Frame = 0

Query: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60
           M+A++E +S  GL  +ILPPRLEDAGLEDCALPP+SI+EAF KAASA+K+ AT+F S D+
Sbjct: 1   MEASKEQES-TGLLHKILPPRLEDAGLEDCALPPESIKEAFLKAASAVKAGATSFFSGDE 60

Query: 61  GEDSDGYGVEDNWS-------------PTASLPTDVVTGILPELDPPAACATDKGLKLPE 120
            +D     V+D W              P +++P D + G+ PE D P  C T+KG  L  
Sbjct: 61  EDDC----VQDPWPEAIDLSDEVIGGLPGSAMP-DTLVGVEPEKDVPGQCVTEKGDGLVW 120

Query: 121 FNVDGVVVGG---MEERRGKGCVVDVLEGLEVGDE---------AXXXXXXXXXXXXPIL 161
              D VVVGG    E+ R KGCV D  +GL++ D+          XXXXXXXX    PIL
Sbjct: 121 EGGDKVVVGGGDVEEKEREKGCVDDGFKGLKIADKEENGXXXXXXXXXXXXXXEGERPIL 179

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022949149.15.6e-79100.00uncharacterized protein LOC111452587 [Cucurbita moschata][more]
XP_023523630.12.4e-7798.18uncharacterized protein LOC111787807 [Cucurbita pepo subsp. pepo][more]
XP_022998076.18.4e-6792.14uncharacterized protein LOC111492831 [Cucurbita maxima][more]
XP_008447517.12.7e-4967.50PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo][more]
XP_022153664.14.2e-4257.87uncharacterized protein LOC111021118 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT1G15230.16.3e-1645.06unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3BI85|A0A1S3BI85_CUCME1.8e-4967.50uncharacterized protein LOC103489947 OS=Cucumis melo OX=3656 GN=LOC103489947 PE=... [more]
tr|A0A0A0LDD6|A0A0A0LDD6_CUCSA1.4e-4163.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483800 PE=4 SV=1[more]
tr|W9REE4|W9REE4_9ROSA8.7e-2852.00Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026204 PE=4 SV=1[more]
tr|A0A2I4GZJ7|A0A2I4GZJ7_9ROSI5.3e-2544.86uncharacterized protein LOC109012252 OS=Juglans regia OX=51240 GN=LOC109012252 P... [more]
tr|A0A2C9W268|A0A2C9W268_MANES1.5e-2447.57Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G128500 PE=4 SV=... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04262-RACarg04262-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..165
NoneNo IPR availablePANTHERPTHR36713FAMILY NOT NAMEDcoord: 8..160

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg04262Carg06479Silver-seed gourdcarcarB139