Carg04262-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGCAGCAGAAGAACACCAATCCAAACCAGGTCTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCTGGACTCGAGGACTGTGCCCTTCCTCCCGATTCTATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCTATCAAATCCACGGCCACCGCCTTTCTTTCCTCCGACGACGGCGAAGATTCCGATGGCTACGGTGTCGAGGATAACTGGTCGCCTACTGCGTCTCTACCTACCGATGTCGTCACTGGAATCTTGCCGGAACTGGATCCTCCGGCAGCTTGCGCGACGGATAAGGGATTGAAACTGCCGGAGTTTAATGTCGATGGGGTCGTAGTAGGGGGAATGGAGGAGAGGAGAGGAAAGGGTTGTGTGGTAGATGTATTGGAAGGGTTGGAGGTTGGAGATGAAGCCAAGAAGAAGAAGAAGAGCGGTGAAGAAGAAGAGCAACCTATTTTAGCGGAAGGTTTTGCTTTAAATTCTGCAGTTTAA ATGGACGCAGCAGAAGAACACCAATCCAAACCAGGTCTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCTGGACTCGAGGACTGTGCCCTTCCTCCCGATTCTATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCTATCAAATCCACGGCCACCGCCTTTCTTTCCTCCGACGACGGCGAAGATTCCGATGGCTACGGTGTCGAGGATAACTGGTCGCCTACTGCGTCTCTACCTACCGATGTCGTCACTGGAATCTTGCCGGAACTGGATCCTCCGGCAGCTTGCGCGACGGATAAGGGATTGAAACTGCCGGAGTTTAATGTCGATGGGGTCGTAGTAGGGGGAATGGAGGAGAGGAGAGGAAAGGGTTGTGTGGTAGATGTATTGGAAGGGTTGGAGGTTGGAGATGAAGCCAAGAAGAAGAAGAAGAGCGGTGAAGAAGAAGAGCAACCTATTTTAGCGGAAGGTTTTGCTTTAAATTCTGCAGTTTAA ATGGACGCAGCAGAAGAACACCAATCCAAACCAGGTCTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCTGGACTCGAGGACTGTGCCCTTCCTCCCGATTCTATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCTATCAAATCCACGGCCACCGCCTTTCTTTCCTCCGACGACGGCGAAGATTCCGATGGCTACGGTGTCGAGGATAACTGGTCGCCTACTGCGTCTCTACCTACCGATGTCGTCACTGGAATCTTGCCGGAACTGGATCCTCCGGCAGCTTGCGCGACGGATAAGGGATTGAAACTGCCGGAGTTTAATGTCGATGGGGTCGTAGTAGGGGGAATGGAGGAGAGGAGAGGAAAGGGTTGTGTGGTAGATGTATTGGAAGGGTTGGAGGTTGGAGATGAAGCCAAGAAGAAGAAGAAGAGCGGTGAAGAAGAAGAGCAACCTATTTTAGCGGAAGGTTTTGCTTTAAATTCTGCAGTTTAA MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDDGEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEERRGKGCVVDVLEGLEVGDEAKKKKKSGEEEEQPILAEGFALNSAV
BLAST of Carg04262-RA vs. NCBI nr
Match: XP_022949149.1 (uncharacterized protein LOC111452587 [Cucurbita moschata]) HSP 1 Score: 303.1 bits (775), Expect = 5.6e-79 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of Carg04262-RA vs. NCBI nr
Match: XP_023523630.1 (uncharacterized protein LOC111787807 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 297.7 bits (761), Expect = 2.4e-77 Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 0
BLAST of Carg04262-RA vs. NCBI nr
Match: XP_022998076.1 (uncharacterized protein LOC111492831 [Cucurbita maxima]) HSP 1 Score: 262.7 bits (670), Expect = 8.4e-67 Identity = 129/140 (92.14%), Postives = 134/140 (95.71%), Query Frame = 0
BLAST of Carg04262-RA vs. NCBI nr
Match: XP_008447517.1 (PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo]) HSP 1 Score: 204.5 bits (519), Expect = 2.7e-49 Identity = 108/160 (67.50%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of Carg04262-RA vs. NCBI nr
Match: XP_022153664.1 (uncharacterized protein LOC111021118 [Momordica charantia]) HSP 1 Score: 180.6 bits (457), Expect = 4.2e-42 Identity = 103/178 (57.87%), Postives = 119/178 (66.85%), Query Frame = 0
BLAST of Carg04262-RA vs. TAIR10
Match: AT1G15230.1 (unknown protein) HSP 1 Score: 81.3 bits (199), Expect = 6.3e-16 Identity = 73/162 (45.06%), Postives = 90/162 (55.56%), Query Frame = 0
BLAST of Carg04262-RA vs. TrEMBL
Match: tr|A0A1S3BI85|A0A1S3BI85_CUCME (uncharacterized protein LOC103489947 OS=Cucumis melo OX=3656 GN=LOC103489947 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.8e-49 Identity = 108/160 (67.50%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of Carg04262-RA vs. TrEMBL
Match: tr|A0A0A0LDD6|A0A0A0LDD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483800 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.4e-41 Identity = 101/160 (63.12%), Postives = 110/160 (68.75%), Query Frame = 0
BLAST of Carg04262-RA vs. TrEMBL
Match: tr|W9REE4|W9REE4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026204 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 8.7e-28 Identity = 78/150 (52.00%), Postives = 95/150 (63.33%), Query Frame = 0
BLAST of Carg04262-RA vs. TrEMBL
Match: tr|A0A2I4GZJ7|A0A2I4GZJ7_9ROSI (uncharacterized protein LOC109012252 OS=Juglans regia OX=51240 GN=LOC109012252 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 5.3e-25 Identity = 83/185 (44.86%), Postives = 103/185 (55.68%), Query Frame = 0
BLAST of Carg04262-RA vs. TrEMBL
Match: tr|A0A2C9W268|A0A2C9W268_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G128500 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.5e-24 Identity = 88/185 (47.57%), Postives = 112/185 (60.54%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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