Cucsa.062020 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAAATCCCGAATTAGGGTTTCTCATTCTTCATTATCGTCATGGATGCAGCAGAACATCACAATCCCCAACCAAGTTTCTTCCATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATTCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCCGTCAAATCCAGGGCCACCGCCCGTCTTTCACACTCCGACGACGAGGATGATGATGTTCCATGCTCCCCTACTTCCGCACTACCAACCGACGAGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGGAATTGCCCGAATTCGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGGTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGATGCCGAGAAGGAGAGCGGGAAAGAGGAGAAGAAGAAACCTGTCTTAGGCGAAGGTTTCGCTTGAAATTGTATAGATGAGTTTAGGTCATAGTTAGAATGGGGGAGGGCTGTTGTTCTTGAAAAGTTATTGTTTTCACGTTGTTTGTGAATAGAGATGAGTTCTTGATTTTATTTTTCACCAAAAGTATTTTTATTTATTGATCGTAGAGCATATATAGGTTTTAATTTAAACTCGAAACTCCAATGGTTCTTTCAACATTCCTAATCACC TCAAATCCCGAATTAGGGTTTCTCATTCTTCATTATCGTCATGGATGCAGCAGAACATCACAATCCCCAACCAAGTTTCTTCCATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATTCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCCGTCAAATCCAGGGCCACCGCCCGTCTTTCACACTCCGACGACGAGGATGATGATGTTCCATGCTCCCCTACTTCCGCACTACCAACCGACGAGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGGAATTGCCCGAATTCGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGGTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGATGCCGAGAAGGAGAGCGGGAAAGAGGAGAAGAAGAAACCTGTCTTAGGCGAAGGTTTCGCTTGAAATTGTATAGATGAGTTTAGGTCATAGTTAGAATGGGGGAGGGCTGTTGTTCTTGAAAAGTTATTGTTTTCACGTTGTTTGTGAATAGAGATGAGTTCTTGATTTTATTTTTCACCAAAAGTATTTTTATTTATTGATCGTAGAGCATATATAGGTTTTAATTTAAACTCGAAACTCCAATGGTTCTTTCAACATTCCTAATCACC ATGGATGCAGCAGAACATCACAATCCCCAACCAAGTTTCTTCCATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATTCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCCGTCAAATCCAGGGCCACCGCCCGTCTTTCACACTCCGACGACGAGGATGATGATGTTCCATGCTCCCCTACTTCCGCACTACCAACCGACGAGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGGAATTGCCCGAATTCGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGGTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGATGCCGAGAAGGAGAGCGGGAAAGAGGAGAAGAAGAAACCTGTCTTAGGCGAAGGTTTCGCTTGA MDAAEHHNPQPSFFHQILPPRLEDAGLEDSALPPDSIREAFFKAASAVKSRATARLSHSDDEDDDVPCSPTSALPTDEDAPAICATKKGLELPEFGKDEVVIGGMEERRGKGCVVDGLEGLEIGDDAEKESGKEEKKKPVLGEGFA*
BLAST of Cucsa.062020 vs. TrEMBL
Match: A0A0A0LDD6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G483800 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 3.4e-78 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
BLAST of Cucsa.062020 vs. TrEMBL
Match: W9REE4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026204 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.7e-24 Identity = 74/176 (42.05%), Postives = 99/176 (56.25%), Query Frame = 1
BLAST of Cucsa.062020 vs. TrEMBL
Match: A0A067KYC4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06291 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.6e-22 Identity = 77/168 (45.83%), Postives = 98/168 (58.33%), Query Frame = 1
BLAST of Cucsa.062020 vs. TrEMBL
Match: A0A118JVC0_CYNCS (Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_004973 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 4.5e-22 Identity = 73/160 (45.62%), Postives = 92/160 (57.50%), Query Frame = 1
BLAST of Cucsa.062020 vs. TrEMBL
Match: A0A164URG4_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_026329 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.3e-21 Identity = 73/157 (46.50%), Postives = 93/157 (59.24%), Query Frame = 1
BLAST of Cucsa.062020 vs. TAIR10
Match: AT1G15230.1 (AT1G15230.1 unknown protein) HSP 1 Score: 72.8 bits (177), Expect = 2.0e-13 Identity = 57/147 (38.78%), Postives = 80/147 (54.42%), Query Frame = 1
BLAST of Cucsa.062020 vs. NCBI nr
Match: gi|778681386|ref|XP_011651498.1| (PREDICTED: uncharacterized protein LOC105434906 [Cucumis sativus]) HSP 1 Score: 298.9 bits (764), Expect = 4.9e-78 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
BLAST of Cucsa.062020 vs. NCBI nr
Match: gi|659093392|ref|XP_008447517.1| (PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo]) HSP 1 Score: 241.5 bits (615), Expect = 9.2e-61 Identity = 128/156 (82.05%), Postives = 135/156 (86.54%), Query Frame = 1
BLAST of Cucsa.062020 vs. NCBI nr
Match: gi|703104693|ref|XP_010098072.1| (hypothetical protein L484_026204 [Morus notabilis]) HSP 1 Score: 120.6 bits (301), Expect = 2.4e-24 Identity = 74/176 (42.05%), Postives = 99/176 (56.25%), Query Frame = 1
BLAST of Cucsa.062020 vs. NCBI nr
Match: gi|470134127|ref|XP_004302907.1| (PREDICTED: uncharacterized protein LOC101294382 [Fragaria vesca subsp. vesca]) HSP 1 Score: 120.6 bits (301), Expect = 2.4e-24 Identity = 78/161 (48.45%), Postives = 96/161 (59.63%), Query Frame = 1
BLAST of Cucsa.062020 vs. NCBI nr
Match: gi|1000973650|ref|XP_015572838.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC8274490 [Ricinus communis]) HSP 1 Score: 119.0 bits (297), Expect = 6.9e-24 Identity = 77/166 (46.39%), Postives = 99/166 (59.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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