CsGy3G023020 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCAGCAGAACATCACAATCCCCAACCAAGTTTCTTCCATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATTCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCCGTCAAATCCAGGGCCACCGCCCGTCTTTCACACTCCGACGACGAGGATGATGATGTTCCATGCTCCCCTACTTCCGCACTACCAACCGACGAGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGGAATTGCCCGAATTCGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGGTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGATGCCGAGAAGGAGAGCGGGAAAGAGGAGAAGAAGAAACCTGTCTTAGGCGAAGGTTTCGCTTGA ATGGATGCAGCAGAACATCACAATCCCCAACCAAGTTTCTTCCATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATTCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCCGTCAAATCCAGGGCCACCGCCCGTCTTTCACACTCCGACGACGAGGATGATGATGTTCCATGCTCCCCTACTTCCGCACTACCAACCGACGAGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGGAATTGCCCGAATTCGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGGTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGATGCCGAGAAGGAGAGCGGGAAAGAGGAGAAGAAGAAACCTGTCTTAGGCGAAGGTTTCGCTTGA ATGGATGCAGCAGAACATCACAATCCCCAACCAAGTTTCTTCCATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATTCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCCGTCAAATCCAGGGCCACCGCCCGTCTTTCACACTCCGACGACGAGGATGATGATGTTCCATGCTCCCCTACTTCCGCACTACCAACCGACGAGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGGAATTGCCCGAATTCGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGGTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGATGCCGAGAAGGAGAGCGGGAAAGAGGAGAAGAAGAAACCTGTCTTAGGCGAAGGTTTCGCTTGA MDAAEHHNPQPSFFHQILPPRLEDAGLEDSALPPDSIREAFFKAASAVKSRATARLSHSDDEDDDVPCSPTSALPTDEDAPAICATKKGLELPEFGKDEVVIGGMEERRGKGCVVDGLEGLEIGDDAEKESGKEEKKKPVLGEGFA
BLAST of CsGy3G023020 vs. NCBI nr
Match: XP_011651498.1 (PREDICTED: uncharacterized protein LOC105434906 [Cucumis sativus] >KGN58071.1 hypothetical protein Csa_3G483800 [Cucumis sativus]) HSP 1 Score: 291.6 bits (745), Expect = 1.5e-75 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CsGy3G023020 vs. NCBI nr
Match: XP_008447517.1 (PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo]) HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55 Identity = 125/156 (80.13%), Postives = 130/156 (83.33%), Query Frame = 0
BLAST of CsGy3G023020 vs. NCBI nr
Match: XP_022949149.1 (uncharacterized protein LOC111452587 [Cucurbita moschata]) HSP 1 Score: 173.7 bits (439), Expect = 4.6e-40 Identity = 101/160 (63.12%), Postives = 110/160 (68.75%), Query Frame = 0
BLAST of CsGy3G023020 vs. NCBI nr
Match: XP_023523630.1 (uncharacterized protein LOC111787807 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 169.9 bits (429), Expect = 6.6e-39 Identity = 99/160 (61.88%), Postives = 109/160 (68.12%), Query Frame = 0
BLAST of CsGy3G023020 vs. NCBI nr
Match: XP_022998076.1 (uncharacterized protein LOC111492831 [Cucurbita maxima]) HSP 1 Score: 162.2 bits (409), Expect = 1.4e-36 Identity = 91/143 (63.64%), Postives = 102/143 (71.33%), Query Frame = 0
BLAST of CsGy3G023020 vs. TAIR10
Match: AT1G15230.1 (unknown protein) HSP 1 Score: 71.2 bits (173), Expect = 5.8e-13 Identity = 58/144 (40.28%), Postives = 79/144 (54.86%), Query Frame = 0
BLAST of CsGy3G023020 vs. TrEMBL
Match: tr|A0A0A0LDD6|A0A0A0LDD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483800 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 9.9e-76 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CsGy3G023020 vs. TrEMBL
Match: tr|A0A1S3BI85|A0A1S3BI85_CUCME (uncharacterized protein LOC103489947 OS=Cucumis melo OX=3656 GN=LOC103489947 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 2.5e-55 Identity = 125/156 (80.13%), Postives = 130/156 (83.33%), Query Frame = 0
BLAST of CsGy3G023020 vs. TrEMBL
Match: tr|A0A2I4GZJ7|A0A2I4GZJ7_9ROSI (uncharacterized protein LOC109012252 OS=Juglans regia OX=51240 GN=LOC109012252 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.2e-22 Identity = 84/185 (45.41%), Postives = 105/185 (56.76%), Query Frame = 0
BLAST of CsGy3G023020 vs. TrEMBL
Match: tr|A0A2N9FB17|A0A2N9FB17_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11973 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.2e-20 Identity = 68/130 (52.31%), Postives = 85/130 (65.38%), Query Frame = 0
BLAST of CsGy3G023020 vs. TrEMBL
Match: tr|W9REE4|W9REE4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026204 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 7.7e-20 Identity = 68/149 (45.64%), Postives = 84/149 (56.38%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |