Carg04182 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04182
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Glucosidase 2 subunit beta
Location	Cucurbita_argyrosperma_scaffold_044 : 649940 .. 652573 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAGAAAATTACATAAAATATAACTTAGGTAGTCAATAGTAGAATGAAGAGGAACTGCGCTCAGTTTGTGAAGTCTCCGAACTTTTGATCAATTTCAGCTCCTCCGATTGCCCTGAAGCTTATGATTTCGTTACCGCAGGCAAAATTTTGACAGAAATGGAAGCAGGTCATTCTCCAAAGTCCATGAGCTTCGTTTTGCTGCTTTCATTCTGTTTCTTCTTCGCTTCTGTTCGCTCTGTTCCATCACTTATCGGAGTGCACCCCCTTGGTAATCTTATCTTCTCTCTTTCTTTCTTTGACTGTGTGCTTGATCGTCTCACTGGATCTGGTTCTGCGAAGCTTAAAATTGAAATTTCTAGTGCTATTTCGCCCCTCATCCATCTAACTGCCCCTTTTGGGGTGTACCCATATTGTCAATTGATATTAAATTGGTGCCCATTCGGTAAAATTTTCTGAATTGAAATGTGTATTCGATTGCAGATGAGAAATATTATTCATCGGAGGTCATAAAATGCAAGGATGGGTCTCGATCTTTTACTATTGATCGTCTCAACGACGATTTCTGTGACTGCGTTGATGGGACCGATGAGCCTGGTGCTTTCTTAGTTCTTACTGGATTTTAATAATTAATGTTATGCCTTTCTAAGGATTTCCGATGCATAATTTGTTTCGAACATCTAATATCGATTTTCGAGTGGTTGAATTGATTGAGAAGTTCTGGTTTATGGAATGGAGAAGAAAATTTCTTACCGAAGACCTTCAATTTGAAATGGCTGTTGAAATTAGGTATTTAACTAAGACAACAATTAATAGCCATTGTAATCTGTCTTAAATGGGAACTTGGTAAAGTTTAATGTTCTATTGCATATCCTAGAAGATCATGACTTGTTTTTCTTTCTGAATTTTCACCGGCATGTTGAGAATTGGAATGTCGATACCGTATCTATTTTTTCCTGTATCATTAGAAAGTAGGATAGGTTCTGCATTAGAATGATACTGAACTTATAAGCAATAAATCCGAATTCCGGGATGGCCAATTGTTCATGTGAACAAAAGGAAAACAAACCTTTCCCAATAGGCAAGAAGAGACCACACTCACACAAATACTGTGCAAGGATCAGCCAATTGTCTCATGGATTTGACATTTGCAGGAACTTCTGCCTGTGCAAGAGGGAAGTTCTATTGCAGGAACATGGGAAGTACACCACGGTTCCTATTTTCTTCCCGCGTCAACGATCATATTTGTGGTAACTATCTCTGAAATCTTTTGTTTTTCTTCTTCATTTATGCATGTGATTCTATTGAAGTTTGGTCAAAAGAAGACAGGTGAGTCAATGAAACACCATAAATTTGTTGATGTAGATTTTAGTACAACCTTCCTGTGATGGTATGTGTAATGCAATGAGTACAAGTCATGTGCTAATTGTGCTGATTATTTGTTCTTCCTGCTTTATGTTTAGACAATTTAAGGTCTCTATTCTGTGTAAAGTCTGCAAACAGTGATTGAAACTTTAAAATCAGCATTTTCCAGACCAAAACTTTACAGACCATTTTGTTCCATGTGCCAAGTTTGTCTGCATTTTTTTTGACTTGTGTTTGAATCCACAGGTAATTTGAGAAACTTGGGGTTTTCATTTCATCTTTGAATTAAATTCTAGTTCCCTGTTCAATATATAATTGTAGATTGCTGTGATGGAAGTGATGAATATGATGGTAATATCTTTTGCCCGAACACGTGTGTCATGGGGGGAAATGCAGCGTACAAGAACAGTTATTATATTTCGACTTCTCGAGATGTGGATGTAATCAACAGAAAAGTAAAGGAGGAAATCACCAAGGAGGACTTGTTCCATAGGCTAATTGGTAGGATTTTTGTTTAAGTAATTACGAAACAGATTTCGAAGTACTCGACTGATTGTTGCAACTTATAATTCCAGGTTTGAAGCTAGTAATAATCCTACAGGTAGCTCTCACATGTTTTGCAGTCCTCATTTGGGCAAACCGATGTCGTGCGAAATCTAAGAGAAGACGACACCGCTGAAGCAAGCGTGGCTATCGTCATTCTGCTCTGCTTTAATCCTAAGTACGTCTCCCATTAGAGCATATGGCTTAGTGTTCAATATCCATTAGGTCTCCTGGCGTCTGTTATCAGCATGATTTCATGATCTTGTTTCTTTCAGGTACTCTCAAACCTCAACCCGCTGGATAAAGAACTCCTGCTCTACCTTCACCCTTCACCGCAGAGCCATGGTCCATTGGTTGGCTAGGGCTAAGCTATATTATATATAAAGATCCATCTTAAGCCAACTTAGCCATGACCTAAAACATCCTGCTTCCATCATAGCAGCACAATAACACAAAGGATTAGCAACTCTGTCTGCATCAATTTTGTTACAATTAGGTTAGTTGATTGACTCGTTAGTAAAGTTGATGGTTTCTTCCACTCGAACCAGGTTCGAATCCCCCCCCTGCAATGTACCATATCAAAAGAGAAACAATTCTGTTACAATGTTTGTCTTACATGACTTTCAATATCGCCCTGTCGAAGTTGCAGCCTTTGATTCGATATCGAACCAAATGAAAGTAGTGTAAAAGTAAAATCAGGGGTAGGTGAAAGAGATAGTAGCAAATCC

mRNA sequence

TAAAGAAAATTACATAAAATATAACTTAGGTAGTCAATAGTAGAATGAAGAGGAACTGCGCTCAGTTTGTGAAGTCTCCGAACTTTTGATCAATTTCAGCTCCTCCGATTGCCCTGAAGCTTATGATTTCGTTACCGCAGGCAAAATTTTGACAGAAATGGAAGCAGGTCATTCTCCAAAGTCCATGAGCTTCGTTTTGCTGCTTTCATTCTGTTTCTTCTTCGCTTCTGTTCGCTCTGTTCCATCACTTATCGGAGTGCACCCCCTTGATGAGAAATATTATTCATCGGAGGTCATAAAATGCAAGGATGGGTCTCGATCTTTTACTATTGATCGTCTCAACGACGATTTCTGTGACTGCGTTGATGGGACCGATGAGCCTGGTGCTTTCTTAGTTCTTACTGGATTTTAATAATTAATGTTATGCCTTTCTAAGGATTTCCGATGCATAATTTGTTTCGAACATCTAATATCGATTTTCGAGTGGTTGAATTGATTGAGAAGTTCTGGTTTATGGAATGGAGAAGAAAATTTCTTACCGAAGACCTTCAATTTGAAATGGCTGTTGAAATTAGGTATTTAACTAAGACAACAATTAATAGCCATTGTAATCTGTCTTAAATGGGAACTTGGTAAAGTTTAATGTTCTATTGCATATCCTAGAAGATCATGACTTGTTTTTCTTTCTGAATTTTCACCGGCATGTTGAGAATTGGAATGTCGATACCGTATCTATTTTTTCCTGTATCATTAGAAAGTAGGATAGGTTCTGCATTAGAATGATACTGAACTTATAAGCAATAAATCCGAATTCCGGGATGGCCAATTGTTCATGTGAACAAAAGGAAAACAAACCTTTCCCAATAGGCAAGAAGAGACCACACTCACACAAATACTGTGCAAGGATCAGCCAATTGTCTCATGGATTTGACATTTGCAGGAACTTCTGCCTGTGCAAGAGGGAAGTTCTATTGCAGGAACATGGGAAGTACACCACGGTTCCTATTTTCTTCCCGCGTCAACGATCATATTTGTGATTGCTGTGATGGAAGTGATGAATATGATGGTAATATCTTTTGCCCGAACACGTGTGTCATGGGGGGAAATGCAGCGTACAAGAACAGTTATTATATTTCGACTTCTCGAGATGTGGATGTAATCAACAGAAAAGTAAAGGAGGAAATCACCAAGGAGGACTTGTTCCATAGGCTAATTGGTTTGAAGCTAGTAATAATCCTACAGGTAGCTCTCACATGTTTTGCAGTCCTCATTTGGGCAAACCGATGTCGTGCGAAATCTAAGAGAAGACGACACCGCTGAAGCAAGCGTGGCTATCGTCATTCTGCTCTGCTTTAATCCTAAGTACTCTCAAACCTCAACCCGCTGGATAAAGAACTCCTGCTCTACCTTCACCCTTCACCGCAGAGCCATGGTCCATTGGTTGGCTAGGGCTAAGCTATATTATATATAAAGATCCATCTTAAGCCAACTTAGCCATGACCTAAAACATCCTGCTTCCATCATAGCAGCACAATAACACAAAGGATTAGCAACTCTGTCTGCATCAATTTTGTTACAATTAGGTTAGTTGATTGACTCGTTAGTAAAGTTGATGGTTTCTTCCACTCGAACCAGGTTCGAATCCCCCCCCTGCAATGTACCATATCAAAAGAGAAACAATTCTGTTACAATGTTTGTCTTACATGACTTTCAATATCGCCCTGTCGAAGTTGCAGCCTTTGATTCGATATCGAACCAAATGAAAGTAGTGTAAAAGTAAAATCAGGGGTAGGTGAAAGAGATAGTAGCAAATCC

Coding sequence (CDS)

ATGGATTTGACATTTGCAGGAACTTCTGCCTGTGCAAGAGGGAAGTTCTATTGCAGGAACATGGGAAGTACACCACGGTTCCTATTTTCTTCCCGCGTCAACGATCATATTTGTGATTGCTGTGATGGAAGTGATGAATATGATGGTAATATCTTTTGCCCGAACACGTGTGTCATGGGGGGAAATGCAGCGTACAAGAACAGTTATTATATTTCGACTTCTCGAGATGTGGATGTAATCAACAGAAAAGTAAAGGAGGAAATCACCAAGGAGGACTTGTTCCATAGGCTAATTGGTTTGAAGCTAGTAATAATCCTACAGGTAGCTCTCACATGTTTTGCAGTCCTCATTTGGGCAAACCGATGTCGTGCGAAATCTAAGAGAAGACGACACCGCTGA

Protein sequence

MDLTFAGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRCRAKSKRRRHR

Homology

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BLAST of Carg04182 vs. NCBI nr
Match: XP_008455476.1 (PREDICTED: glucosidase 2 subunit beta isoform X2 [Cucumis melo])

HSP 1 Score: 223.8 bits (569), Expect = 3.5e-55
Identity = 107/126 (84.92%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYK 66
           GTSACARGKFYCRNMGSTPRF+FSSRVNDHICDCCDGSDEY+GNIFCPNTCVMGGN  YK
Sbjct: 37  GTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGN-MYK 96

Query: 67  NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRCRAKS 126
           ++  +ST+RDVD++ RKVKEEITKEDLF +L GLKLVIILQVALT FA+LIWANRCR KS
Sbjct: 97  SNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANRCRVKS 156

Query: 127 KRRRHR 133
           KRRRHR
Sbjct: 157 KRRRHR 161

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BLAST of Carg04182 vs. NCBI nr
Match: XP_022952390.1 (glucosidase 2 subunit beta [Cucurbita moschata])

HSP 1 Score: 213.8 bits (543), Expect = 3.6e-52
Identity = 108/126 (85.71%), Postives = 108/126 (85.71%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYK 66
           GTSACARGKFYCRNMGSTPRFLF                  DGNIFCPNTCVMGGNAAYK
Sbjct: 76  GTSACARGKFYCRNMGSTPRFLFXXXXXXXXXXXXXXXXXXDGNIFCPNTCVMGGNAAYK 135

Query: 67  NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRCRAKS 126
           NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRCRAKS
Sbjct: 136 NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRCRAKS 195

Query: 127 KRRRHR 133
           KRRRHR
Sbjct: 196 KRRRHR 201

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BLAST of Carg04182 vs. NCBI nr
Match: XP_023554618.1 (glucosidase 2 subunit beta [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.2 bits (539), Expect = 1.0e-51
Identity = 107/126 (84.92%), Postives = 108/126 (85.71%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYK 66
           GTSACARGKFYCRNMGSTPRFLF                  DGNIFCPNTCVMGGNAAYK
Sbjct: 76  GTSACARGKFYCRNMGSTPRFLFXXXXXXXXXXXXXXXXXXDGNIFCPNTCVMGGNAAYK 135

Query: 67  NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRCRAKS 126
           NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRC+AKS
Sbjct: 136 NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRCQAKS 195

Query: 127 KRRRHR 133
           KRRRHR
Sbjct: 196 KRRRHR 201

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BLAST of Carg04182 vs. NCBI nr
Match: XP_022969237.1 (glucosidase 2 subunit beta [Cucurbita maxima])

HSP 1 Score: 200.7 bits (509), Expect = 3.2e-48
Identity = 102/124 (82.26%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYK 66
           GTSACARGKFYCRNMGSTPRFLF                  DGNIFCPNTCVMGGNAAYK
Sbjct: 114 GTSACARGKFYCRNMGSTPRFLFXXXXXXXXXXXXXXXXXXDGNIFCPNTCVMGGNAAYK 173

Query: 67  NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRCRAKS 126
           NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVAL  FAV+IWANRCR KS
Sbjct: 174 NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALISFAVIIWANRCRVKS 233

Query: 127 KRRR 131
           KRRR
Sbjct: 234 KRRR 237

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BLAST of Carg04182 vs. NCBI nr
Match: XP_022136263.1 (glucosidase 2 subunit beta [Momordica charantia])

HSP 1 Score: 186.8 bits (473), Expect = 4.7e-44
Identity = 91/126 (72.22%), Postives = 103/126 (81.75%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYK 66
           GTSACARGKFYCRNMGSTP+F+FSS                DGNIFCPNTCVMGGN AYK
Sbjct: 76  GTSACARGKFYCRNMGSTPQFIFSSXXXXXXXXXXXXXXXXDGNIFCPNTCVMGGNIAYK 135

Query: 67  NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRCRAKS 126
           ++ YIST++DV ++NRKVKEEITKEDLF +L+GLKLVI+LQVALT FAV IW NRCRA+S
Sbjct: 136 SNNYISTTQDVHIVNRKVKEEITKEDLFQKLMGLKLVIVLQVALTSFAVFIWVNRCRARS 195

Query: 127 KRRRHR 133
           KRRRHR
Sbjct: 196 KRRRHR 201

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BLAST of Carg04182 vs. TAIR10
Match: AT2G42390.1 (protein kinase C substrate, heavy chain-related)

HSP 1 Score: 80.5 bits (197), Expect = 8.6e-16
Identity = 50/134 (37.31%), Postives = 70/134 (52.24%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYK 66
           GTSAC  GKFYCRN+GS+P+F+                     +I CPNTC+MGGN    
Sbjct: 70  GTSACPNGKFYCRNIGSSPKFVXXXXXXXXXXXXXXXXXXXXXSIHCPNTCIMGGNV--- 129

Query: 67  NSYYISTSRDVDVINRKV------KEEIT---KEDLFHRLIGLKLVIILQVALTCFAVLI 126
            +Y      ++  I+ ++      KE  T    +D+   L G+KLV  LQ+    F V++
Sbjct: 130 -NYIYKPRANLKSIHLQLGSTPHPKEFYTIGNLQDMVKNLQGMKLVFALQMVFIGFLVIL 189

Query: 127 WANRCRAKSKRRRH 132
           W  R RA+SKRRR+
Sbjct: 190 WMLRSRARSKRRRY 199

[Close]

BLAST of Carg04182 vs. TAIR10
Match: AT5G56360.1 (calmodulin-binding protein)

HSP 1 Score: 57.8 bits (138), Expect = 6.0e-09
Identity = 28/61 (45.90%), Postives = 32/61 (52.46%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYK 66
           GTSAC  GKFYCRN G +P  LFS                YDG++ C NTC   G AA +
Sbjct: 83  GTSACPTGKFYCRNAGHSPVILFSXXXXXXXXXXXXXXXXYDGHVSCQNTCWEAGKAARE 142

Query: 67  N 68
           N
Sbjct: 143 N 143

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BLAST of Carg04182 vs. Swiss-Prot
Match: sp|P0CT24|GLU2B_USTMA (Glucosidase 2 subunit beta OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=UMAG_12045 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-13
Identity = 47/107 (43.93%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICD--CCDGSDEYDGNIFCPNTCVMGGNAA 66
           GTSAC    FYC N G  P ++ SSRV+D ICD  CCDGSDE DG I CPN C   G   
Sbjct: 80  GTSACPNSSFYCHNTGHMPAYIRSSRVDDGICDPECCDGSDESDGKIRCPNRCEKVGKEY 139

Query: 67  YKNSYYISTSR--DVDVINRKVKEEITKEDLFHRLIGLKLVIILQVA 110
            K    +   R     V ++ + E   +++L H  I  KL I +QVA
Sbjct: 140 RKKLAELDNLRRAGAKVRDKYIAEGRKQKELLHAEIA-KLEIEVQVA 185

[Close]

BLAST of Carg04182 vs. Swiss-Prot
Match: sp|Q9FM96|PSL4_ARATH (Glucosidase 2 subunit beta OS=Arabidopsis thaliana OX=3702 GN=PSL4 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07
Identity = 28/61 (45.90%), Postives = 32/61 (52.46%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYK 66
           GTSAC  GKFYCRN G +P  LFS                YDG++ C NTC   G AA +
Sbjct: 83  GTSACPTGKFYCRNAGHSPVILFSXXXXXXXXXXXXXXXXYDGHVSCQNTCWEAGKAARE 142

Query: 67  N 68
           N
Sbjct: 143 N 143

[Close]

BLAST of Carg04182 vs. Swiss-Prot
Match: sp|A2WNF5|GLU2B_ORYSI (Glucosidase 2 subunit beta OS=Oryza sativa subsp. indica OX=39946 GN=OsI_01383 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.9e-04
Identity = 23/58 (39.66%), Postives = 27/58 (46.55%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAA 65
           GTSAC  GKFYC+N G +P  +FS                   N+ C NTC   G AA
Sbjct: 72  GTSACPEGKFYCQNAGHSPITIFSXXXXXXXXXXXXXXXXXXXNVTCKNTCWEAGKAA 129

[Close]

BLAST of Carg04182 vs. Swiss-Prot
Match: sp|Q5NBP9|GLU2B_ORYSJ (Glucosidase 2 subunit beta OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0276800 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.9e-04
Identity = 23/58 (39.66%), Postives = 27/58 (46.55%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAA 65
           GTSAC  GKFYC+N G +P  +FS                   N+ C NTC   G AA
Sbjct: 72  GTSACPEGKFYCQNAGHSPITIFSXXXXXXXXXXXXXXXXXXXNVTCKNTCWEAGKAA 129

[Close]

BLAST of Carg04182 vs. Swiss-Prot
Match: sp|Q04924|GLU2B_YEAST (Glucosidase 2 subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GTB1 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.2e-04
Identity = 19/31 (61.29%), Postives = 21/31 (67.74%), Query Frame = 0


Query: 16  FYCRNMGSTPRFLFSSRVNDHICDCCDGSDE 47
           FYC N G  PR++  S V D ICDCCD SDE
Sbjct: 102 FYCDNKGFIPRYIRKSEVADGICDCCDCSDE 132

[Close]

BLAST of Carg04182 vs. TrEMBL
Match: tr|A0A1S3C149|A0A1S3C149_CUCME (glucosidase 2 subunit beta isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495629 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.3e-55
Identity = 107/126 (84.92%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYK 66
           GTSACARGKFYCRNMGSTPRF+FSSRVNDHICDCCDGSDEY+GNIFCPNTCVMGGN  YK
Sbjct: 37  GTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGN-MYK 96

Query: 67  NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRCRAKS 126
           ++  +ST+RDVD++ RKVKEEITKEDLF +L GLKLVIILQVALT FA+LIWANRCR KS
Sbjct: 97  SNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANRCRVKS 156

Query: 127 KRRRHR 133
           KRRRHR
Sbjct: 157 KRRRHR 161

[Close]

BLAST of Carg04182 vs. TrEMBL
Match: tr|A0A1S4E0C8|A0A1S4E0C8_CUCME (glucosidase 2 subunit beta isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495629 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.1e-41
Identity = 90/126 (71.43%), Postives = 100/126 (79.37%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYK 66
           GTSACARGKFYCRNMGSTPRF+F                 Y+GNIFCPNTCVMGGN  YK
Sbjct: 75  GTSACARGKFYCRNMGSTPRFIFXXXXXXXXXXXXXXXXXYEGNIFCPNTCVMGGN-MYK 134

Query: 67  NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRCRAKS 126
           ++  +ST+RDVD++ RKVKEEITKEDLF +L GLKLVIILQVALT FA+LIWANRCR KS
Sbjct: 135 SNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANRCRVKS 194

Query: 127 KRRRHR 133
           KRRRHR
Sbjct: 195 KRRRHR 199

[Close]

BLAST of Carg04182 vs. TrEMBL
Match: tr|A0A0A0K1G3|A0A0A0K1G3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041350 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.1e-41
Identity = 91/126 (72.22%), Postives = 99/126 (78.57%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYK 66
           GTSACARGKFYCRNMGSTPRF+F                 Y+GNIFCPNTCVMGGN  YK
Sbjct: 75  GTSACARGKFYCRNMGSTPRFIFXXXXXXXXXXXXXXXXXYEGNIFCPNTCVMGGN-MYK 134

Query: 67  NSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRCRAKS 126
           +   IST+RDVD++ RKVKEEITKEDLF +L GLKLVIILQVALT FA+LIWANRCR KS
Sbjct: 135 SKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSFAILIWANRCRVKS 194

Query: 127 KRRRHR 133
           KRRRHR
Sbjct: 195 KRRRHR 199

[Close]

BLAST of Carg04182 vs. TrEMBL
Match: tr|A0A2U1PJZ4|A0A2U1PJZ4_ARTAN (Protein kinase C substrate, heavy chain-related protein OS=Artemisia annua OX=35608 GN=CTI12_AA144370 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.4e-31
Identity = 74/127 (58.27%), Postives = 88/127 (69.29%), Query Frame = 0


Query: 7   GTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYK 66
           GTSAC  GKFYCRN GS+PRFLFSSRVND ICDCCDGSDEYDG+I CPNTCVMGG+  Y+
Sbjct: 27  GTSACPTGKFYCRNAGSSPRFLFSSRVNDQICDCCDGSDEYDGSIICPNTCVMGGHTEYR 86

Query: 67  NSYYISTSRDVDVINRKVKE-EITKEDLFHRLIGLKLVIILQVALTCFAVLIWANRCRAK 126
              Y S       +  K K+  +  ED   ++ GLK+VII+QV+L  F V +   R RAK
Sbjct: 87  RVNYGSKVNKFGSVGTKQKKIPLNGEDTVQKIQGLKVVIIVQVSLIAFVVFLCLCRRRAK 146

Query: 127 SKRRRHR 133
           S+RR  R
Sbjct: 147 SRRRNSR 153

[Close]

BLAST of Carg04182 vs. TrEMBL
Match: tr|A0A2K1WRW8|A0A2K1WRW8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G092100v3 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.2e-26
Identity = 63/102 (61.76%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 6   AGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAY 65
           AGTSAC  GKFYCRN GSTP+F+FSSRVND ICDCCDGSDEY   I CPNTCVMGG+  Y
Sbjct: 25  AGTSACPSGKFYCRNAGSTPKFIFSSRVNDQICDCCDGSDEYGSGINCPNTCVMGGDLEY 84

Query: 66  KNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQ 108
           K   YIS    +D+  ++ K  +  E+LF +  GLK++IILQ
Sbjct: 85  KAGNYIS---HIDM--KESKRGLILEELFQKARGLKVIIILQ 121

The following BLAST results are available for this feature:

BLAST of Carg04182 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455476.1	3.5e-55	84.92	PREDICTED: glucosidase 2 subunit beta isoform X2 [Cucumis melo]	[more]
XP_022952390.1	3.6e-52	85.71	glucosidase 2 subunit beta [Cucurbita moschata]	[more]
XP_023554618.1	1.0e-51	84.92	glucosidase 2 subunit beta [Cucurbita pepo subsp. pepo]	[more]
XP_022969237.1	3.2e-48	82.26	glucosidase 2 subunit beta [Cucurbita maxima]	[more]
XP_022136263.1	4.7e-44	72.22	glucosidase 2 subunit beta [Momordica charantia]	[more]

BLAST of Carg04182 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42390.1	8.6e-16	37.31	protein kinase C substrate, heavy chain-related	[more]
AT5G56360.1	6.0e-09	45.90	calmodulin-binding protein	[more]

BLAST of Carg04182 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0CT24\|GLU2B_USTMA	2.2e-13	43.93	Glucosidase 2 subunit beta OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631...	[more]
sp\|Q9FM96\|PSL4_ARATH	1.1e-07	45.90	Glucosidase 2 subunit beta OS=Arabidopsis thaliana OX=3702 GN=PSL4 PE=2 SV=1	[more]
sp\|A2WNF5\|GLU2B_ORYSI	1.9e-04	39.66	Glucosidase 2 subunit beta OS=Oryza sativa subsp. indica OX=39946 GN=OsI_01383 P...	[more]
sp\|Q5NBP9\|GLU2B_ORYSJ	1.9e-04	39.66	Glucosidase 2 subunit beta OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0276...	[more]
sp\|Q04924\|GLU2B_YEAST	4.2e-04	61.29	Glucosidase 2 subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S28...	[more]

BLAST of Carg04182 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C149\|A0A1S3C149_CUCME	2.3e-55	84.92	glucosidase 2 subunit beta isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495629 PE...	[more]
tr\|A0A1S4E0C8\|A0A1S4E0C8_CUCME	1.1e-41	71.43	glucosidase 2 subunit beta isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495629 PE...	[more]
tr\|A0A0A0K1G3\|A0A0A0K1G3_CUCSA	1.1e-41	72.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041350 PE=4 SV=1	[more]
tr\|A0A2U1PJZ4\|A0A2U1PJZ4_ARTAN	1.4e-31	58.27	Protein kinase C substrate, heavy chain-related protein OS=Artemisia annua OX=35...	[more]
tr\|A0A2K1WRW8\|A0A2K1WRW8_POPTR	2.2e-26	61.76	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G092100v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006491	N-glycan processing

Vocabulary: **INTERPRO**
Term	Definition
IPR026874	Glucosidase_2_bsu
IPR028146	PRKCSH_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006491	N-glycan processing
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04182-RA	Carg04182-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028146	Glucosidase II beta subunit, N-terminal	PFAM	PF12999	PRKCSH-like	coord: 7..60 e-value: 1.9E-17 score: 63.6
None	No IPR available	PANTHER	PTHR12630	N-LINKED OLIGOSACCHARIDE PROCESSING	coord: 7..65
IPR026874	Glucosidase 2 subunit beta	PANTHER	PTHR12630:SF10	GLUCOSIDASE 2 SUBUNIT BETA	coord: 7..65

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04182	Cla015628	Watermelon (97103) v1	carwmB0194
Carg04182	Csa7G041350	Cucumber (Chinese Long) v2	carcuB0228
Carg04182	MELO3C018846	Melon (DHL92) v3.5.1	carmeB0199
Carg04182	ClCG02G002220	Watermelon (Charleston Gray)	carwcgB0194
Carg04182	CSPI07G03400	Wild cucumber (PI 183967)	carcpiB0235
Carg04182	CmaCh19G009020	Cucurbita maxima (Rimu)	carcmaB0279
Carg04182	Lsi11G014200	Bottle gourd (USVL1VR-Ls)	carlsiB174
Carg04182	Cp4.1LG15g07190	Cucurbita pepo (Zucchini)	carcpeB0281
Carg04182	CsGy7G003060	Cucumber (Gy14) v2	carcgybB0217
Carg04182	MELO3C018846.2	Melon (DHL92) v3.6.1	carmedB0204
Carg04182	CsaV3_7G003280	Cucumber (Chinese Long) v3	carcucB0232
Carg04182	Cla97C02G028620	Watermelon (97103) v2	carwmbB0202
Carg04182	Bhi05G001212	Wax gourd	carwgoB0251

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04182	Silver-seed gourd	carcarB236
Carg04182	Cucumber (Gy14) v2	carcgybB0209
Carg04182	Cucumber (Gy14) v1	carcgyB0242
Carg04182	Cucurbita maxima (Rimu)	carcmaB0271
Carg04182	Cucurbita maxima (Rimu)	carcmaB0275
Carg04182	Cucurbita moschata (Rifu)	carcmoB0276
Carg04182	Cucurbita moschata (Rifu)	carcmoB0282
Carg04182	Cucurbita moschata (Rifu)	carcmoB0286
Carg04182	Cucurbita moschata (Rifu)	carcmoB0287
Carg04182	Cucurbita pepo (Zucchini)	carcpeB0282
Carg04182	Cucurbita pepo (Zucchini)	carcpeB0285
Carg04182	Cucurbita pepo (Zucchini)	carcpeB0286
Carg04182	Cucurbita pepo (Zucchini)	carcpeB0288
Carg04182	Wild cucumber (PI 183967)	carcpiB0227
Carg04182	Cucumber (Chinese Long) v3	carcucB0224
Carg04182	Bottle gourd (USVL1VR-Ls)	carlsiB173
Carg04182	Melon (DHL92) v3.5.1	carmeB0206
Carg04182	Melon (DHL92) v3.6.1	carmedB0211
Carg04182	Watermelon (Charleston Gray)	carwcgB0191
Carg04182	Watermelon (97103) v1	carwmB0188
Carg04182	Watermelon (97103) v2	carwmbB0200
Carg04182	Wax gourd	carwgoB0244