Cp4.1LG15g07190 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g07190
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGlucosidase 2 subunit beta
LocationCp4.1LG15 : 7661579 .. 7664175 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTTTTTTTTTTCTAAAGAAAATTACATAAAATATAATTTAGGTAGTGAATAGTAAGGATGAAGAGGAACTGCGCTCAGTTAGTGAAGTCTCCGAACTTTTGATCAATTTCAGCTCCTCCGATTGCCCTGAAGCTTATGATTTCGTTACCGCAGGCAAAATTTTGACAGAAATGGAAGCAGGTCATTCTCCAAAGTCCATGAGCTTCGTTTTGCTGCTTTCATTCTGTTTCTTCTTCGCTTCTGTTCGCTCTGTTCCATCACTTATCGGAGTGCACCCCCTTGGTAATCTTATCTTCTCTCTTTCTTTCTTTGACTGTGTGCTTGATCGTCTCACTGGATCTGGTTCTGCGAAGCTTAAAATTGAAATTTCTAGTGCTATTTCGCCCCTCATCCATCTAACTGCCCCTTTTGGGGTGTACCCATATTGTCAATTGATGTTAAATTGGTGCCCATTCGGTAAAATTTTCTGAATTGAAATGTGTATTCGATTGCAGATGAGAAATATTATTCATCGGAGGTCATAAAATGCAAGGATGGGTCTCGATCTTTTACTATTGATCGTCTCAACGACGATTTCTGTGACTGCGTTGATGGGACCGATGAGCCTGGTGCTTTCTTAGTTCTTACTGGATTTTAATAATTAATGTTATGCCTTTCTAAGGATTTCGGATGCATAATTTGTTTCGAACATCTAATATCGATTTTCGAGTGGTCGAATTGATTGAGAAGTTCTGGTTTGTGGAATGGAGAAGAAAATTTCTTACTGAAGAACTTCAATTTGAAATGGCTGTTGAAATTAGGCATTTAACTAAGGCAACAATTAATAGCCATTGTAATCTGTCTTAAATGGGAACTTGGTAAAGTTTAATGTTCTATTGCATAAACTATTGAAAAAGACCTACCATGATTATCTTAGAAGATCATGACTTGTTTTTCTTTCTGAATTTTCACCGGCATTTTGAGAATTGGAATGTTGATACCATATCTATTTTTTCCTGTATCATTAGAAAGTAGGATAGGTTCTGCATTAGAATGATACTGAACTTATAAGCAATAAATCCGAATTCCGGGATGGCCAATTGGTCATGTGAACAAAAGGAAAACAAACCTTCCCCAATAGGCAAGAAGAGACCACACACACACAAATACAGTGCAAGGATCAACCAATTATCTCATGGATTTGACCTTTGCAGGAACTTCTGCCTGTGCAAGAGGGAAGTTCTATTGCAGGAACATGGGAAGTACGCCACGGTTCCTATTTTCTTCCCGCGTCAACGATCATATTTGTGGTAACTATCTCTGAAATCTTTTGTTTTTCTTCTTCTTTTATGCATGTGATTCTATTGAAGTTTGGTCAAAAGAAGACAGGTGAGTCAATGAAACACCACAAATTTGTTGATGTAGATTTTAGTACAACCTTCCTGTGATGGTATGTGTAATGCAATGAGTACAAGTCATGTGCTAATTGTGCTGATTATTTGTTCTTCCTGCTTTATGTTTAGACAATTTGAGGTCTCTATTCTGTGTAAAGTCTGCAAACAGTGGTTGAACCTTTAAAATCAGCATTTTCCAGACCAAAACTTTACAGACCATTTTGTTCCATGTGCAAAGTTTCATTTCATCTTTGAATTAAATTCTAGTTCCCTTTTCAATATATAATTGTAGATTGCTGTGATGGAAGTGATGAATATGATGGTAATATCTTTTGCCCGAACACGTGTGTCATGGGGGGAAATGCAGCGTACAAGAACAGTTATTATATTTCGACTTCTCGAGATGTGGATGTAATCAACAGAAAAGTAAAGGAGGAAATCACCAAGGAGGACTTGTTCCATAGGCTAATTGGTAGGATTTTTGTAATTACGAAACAGATTTTGAAGTACTCGACTGATTGTTGCAACTTATAATTCCAGGTTTGAAGCTAGTAATAATCCTACAGGTAGCTCTCACATGTTTTGCAGTCCTCATTTGGGCAAACCGATGTCAAGCGAAATCTAAGAGAAGACGACACCGCTGAAGCAAGCGTGGCTATCGTCATTCTGCTCTGCTTTAATCCTAAGTACGTCTCCCATTAGAGCATATGGCTTAGTGTTCAATATCCATTAGGTCTCCTGGCGTCTGTTATGAGCATGATTTCATGATCTTGTTTCTTTCAGGTACTCACAAACCTCAACCCGCTGGATAAAGAACTCCTGCTCTACCTTCACCCTTCACCGCAGAGCCATGGTCCATTGGTTGGCTAGGGCTAAGCTATATCATATATAAAGATCCATCTTAAGCCAACTTAGCCATAACCTAAACATCCTGCTTATCCATCACAGCAGCACAATAACACAAAGGATTAGCAACTCTGTCTGCATCAATTTTGTTACACTTAGGTTAGTTGGTTGACTCATTAGTAAAGTTGATGGTTTCTTCCACTCGATCCGAGGTTCAAACCCCCCCCCTGCAATGTATCATATCAAAAAAGAAACAATTCTGTTACAATGTTTGTCTTACATGACGTTCAATATCGCCCTGTCGAAGTTGCAGCCTTTGATTCGATATCGAACCAAATGAAAGTAGTGTAAAAGTAAAATCAGGGGTAGGTGA

mRNA sequence

TTTTTTTTTTTTTTTTCTAAAGAAAATTACATAAAATATAATTTAGGTAGTGAATAGTAAGGATGAAGAGGAACTGCGCTCAGTTAGTGAAGTCTCCGAACTTTTGATCAATTTCAGCTCCTCCGATTGCCCTGAAGCTTATGATTTCGTTACCGCAGGCAAAATTTTGACAGAAATGGAAGCAGGTCATTCTCCAAAGTCCATGAGCTTCGTTTTGCTGCTTTCATTCTGTTTCTTCTTCGCTTCTGTTCGCTCTGTTCCATCACTTATCGGAGTGCACCCCCTTGATGAGAAATATTATTCATCGGAGGTCATAAAATGCAAGGATGGGTCTCGATCTTTTACTATTGATCGTCTCAACGACGATTTCTGTGACTGCGTTGATGGGACCGATGAGCCTGGAACTTCTGCCTGTGCAAGAGGGAAGTTCTATTGCAGGAACATGGGAAGTACGCCACGGTTCCTATTTTCTTCCCGCGTCAACGATCATATTTGTGATTGCTGTGATGGAAGTGATGAATATGATGGTAATATCTTTTGCCCGAACACGTGTGTCATGGGGGGAAATGCAGCGTACAAGAACAGTTATTATATTTCGACTTCTCGAGATGTGGATGTAATCAACAGAAAAGTAAAGGAGGAAATCACCAAGGAGGACTTGTTCCATAGGCTAATTGGTTTGAAGCTAGTAATAATCCTACAGGTACTCACAAACCTCAACCCGCTGGATAAAGAACTCCTGCTCTACCTTCACCCTTCACCGCAGAGCCATGGTCCATTGGTTGGCTAGGGCTAAGCTATATCATATATAAAGATCCATCTTAAGCCAACTTAGCCATAACCTAAACATCCTGCTTATCCATCACAGCAGCACAATAACACAAAGGATTAGCAACTCTGTCTGCATCAATTTTGTTACACTTAGGTTAGTTGGTTGACTCATTAGTAAAGTTGATGGTTTCTTCCACTCGATCCGAGGTTCAAACCCCCCCCCTGCAATGTATCATATCAAAAAAGAAACAATTCTGTTACAATGTTTGTCTTACATGACGTTCAATATCGCCCTGTCGAAGTTGCAGCCTTTGATTCGATATCGAACCAAATGAAAGTAGTGTAAAAGTAAAATCAGGGGTAGGTGA

Coding sequence (CDS)

ATGGAAGCAGGTCATTCTCCAAAGTCCATGAGCTTCGTTTTGCTGCTTTCATTCTGTTTCTTCTTCGCTTCTGTTCGCTCTGTTCCATCACTTATCGGAGTGCACCCCCTTGATGAGAAATATTATTCATCGGAGGTCATAAAATGCAAGGATGGGTCTCGATCTTTTACTATTGATCGTCTCAACGACGATTTCTGTGACTGCGTTGATGGGACCGATGAGCCTGGAACTTCTGCCTGTGCAAGAGGGAAGTTCTATTGCAGGAACATGGGAAGTACGCCACGGTTCCTATTTTCTTCCCGCGTCAACGATCATATTTGTGATTGCTGTGATGGAAGTGATGAATATGATGGTAATATCTTTTGCCCGAACACGTGTGTCATGGGGGGAAATGCAGCGTACAAGAACAGTTATTATATTTCGACTTCTCGAGATGTGGATGTAATCAACAGAAAAGTAAAGGAGGAAATCACCAAGGAGGACTTGTTCCATAGGCTAATTGGTTTGAAGCTAGTAATAATCCTACAGGTACTCACAAACCTCAACCCGCTGGATAAAGAACTCCTGCTCTACCTTCACCCTTCACCGCAGAGCCATGGTCCATTGGTTGGCTAG

Protein sequence

MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVLTNLNPLDKELLLYLHPSPQSHGPLVG
Homology
[Close]
BLAST of Cp4.1LG15g07190 vs. Swiss-Prot
Match: PSL4_ARATH (Glucosidase 2 subunit beta OS=Arabidopsis thaliana GN=PSL4 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.6e-41
Identity = 81/128 (63.28%), Postives = 93/128 (72.66%), Query Frame = 1 

Query: 10  MSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYY-SSEVIKCKDGSRSFTIDRLNDDFCDC 69
           +SF+LLL+     +S       +G+ P DEKYY SS  IKCKDGS+ FT  +LNDDFCDC
Sbjct: 16  LSFLLLLASAIRSSSSPPNDPFLGISPQDEKYYKSSSEIKCKDGSKKFTKAQLNDDFCDC 75

Query: 70  VDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVM 129
            DGTDEPGTSAC  GKFYCRN G +P  LFSSRVND ICDCCDGSDEYDG++ C NTC  
Sbjct: 76  SDGTDEPGTSACPTGKFYCRNAGHSPVILFSSRVNDGICDCCDGSDEYDGHVSCQNTCWE 135

Query: 130 GGNAAYKN 137
            G AA +N
Sbjct: 136 AGKAAREN 143

[Close]
BLAST of Cp4.1LG15g07190 vs. Swiss-Prot
Match: GLU2B_ORYSJ (Glucosidase 2 subunit beta OS=Oryza sativa subsp. japonica GN=Os01g0276800 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.6e-37
Identity = 72/121 (59.50%), Postives = 84/121 (69.42%), Query Frame = 1 

Query: 13  VLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCVDGT 72
           +LLL      A+ R     +G+ P DE Y+   VI+C+DGS  F  D+LNDDFCDC DGT
Sbjct: 9   LLLLRISASAAASRPPLDTLGIPPQDEAYFRGGVIRCRDGSGRFARDKLNDDFCDCPDGT 68

Query: 73  DEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNA 132
           DEPGTSAC  GKFYC+N G +P  +FSSRVND ICDCCDGSDEYD N+ C NTC   G A
Sbjct: 69  DEPGTSACPEGKFYCQNAGHSPITIFSSRVNDGICDCCDGSDEYDSNVTCKNTCWEAGKA 128

Query: 133 A 134
           A
Sbjct: 129 A 129

[Close]
BLAST of Cp4.1LG15g07190 vs. Swiss-Prot
Match: GLU2B_ORYSI (Glucosidase 2 subunit beta OS=Oryza sativa subsp. indica GN=OsI_01383 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.4e-37
Identity = 72/125 (57.60%), Postives = 86/125 (68.80%), Query Frame = 1 

Query: 9   SMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC 68
           ++  +LLL      A+ R     +G+ P DE Y+   VI+C+DGS  F  D+LNDDFCDC
Sbjct: 5   TLLLLLLLRISASAAASRPPLDTLGIPPQDEAYFRGGVIRCRDGSGRFARDKLNDDFCDC 64

Query: 69  VDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVM 128
            DGTDEPGTSAC  GKFYC+N G +P  +FSSRVND ICDCCDGSDEYD N+ C NTC  
Sbjct: 65  PDGTDEPGTSACPEGKFYCQNAGHSPITIFSSRVNDGICDCCDGSDEYDSNVTCKNTCWE 124

Query: 129 GGNAA 134
            G AA
Sbjct: 125 AGKAA 129

[Close]
BLAST of Cp4.1LG15g07190 vs. Swiss-Prot
Match: GLU2B_MOUSE (Glucosidase 2 subunit beta OS=Mus musculus GN=Prkcsh PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.0e-25
Identity = 46/86 (53.49%), Postives = 60/86 (69.77%), Query Frame = 1 

Query: 41  YYSSEVIKCKDGSRSFTIDRLNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSS 100
           Y  S+   C DG+ +   D++NDD+CDC DG+DEPGT+AC  G F+C N G  P ++ SS
Sbjct: 31  YEESKPFTCLDGTATIPFDQVNDDYCDCKDGSDEPGTAACPNGSFHCTNTGYKPLYILSS 90

Query: 101 RVNDHICDCCDGSDEYDGNIFCPNTC 127
           RVND +CDCCDG+DEY+    C NTC
Sbjct: 91  RVNDGVCDCCDGTDEYNSGTVCENTC 116

[Close]
BLAST of Cp4.1LG15g07190 vs. Swiss-Prot
Match: GLU2B_HUMAN (Glucosidase 2 subunit beta OS=Homo sapiens GN=PRKCSH PE=1 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 3.9e-25
Identity = 55/118 (46.61%), Postives = 73/118 (61.86%), Query Frame = 1 

Query: 10  MSFVLLLSFCFFFASVRSVP-SLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC 69
           +  +LLL  C+     R    SL   H  DE    S+   C DGS +   D++NDD+CDC
Sbjct: 3   LPLLLLLPMCWAVEVKRPRGVSLTNHHFYDE----SKPFTCLDGSATIPFDQVNDDYCDC 62

Query: 70  VDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTC 127
            DG+DEPGT+AC  G F+C N G  P ++ S+RVND +CDCCDG+DEY+  + C NTC
Sbjct: 63  KDGSDEPGTAACPNGSFHCTNTGYKPLYIPSNRVNDGVCDCCDGTDEYNSGVICENTC 116

[Close]
BLAST of Cp4.1LG15g07190 vs. TrEMBL
Match: A0A0A0K1G3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G041350 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 7.8e-81
Identity = 148/172 (86.05%), Postives = 156/172 (90.70%), Query Frame = 1 

Query: 6   SPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDF 65
           SPKS SF  LLS C FF SVRS PS IGVHPLDEKYYSSEVIKCKDGSRSFTIDRLND+F
Sbjct: 5   SPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDNF 64

Query: 66  CDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNT 125
           CDCVDGTDEPGTSACARGKFYCRNMGSTPRF+FSSRVNDHICDCCDGSDEY+GNIFCPNT
Sbjct: 65  CDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNT 124

Query: 126 CVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 178
           CVMGGN  YK+   IST+RDVD++ RKVKEEITKEDLF +L GLKLVIILQV
Sbjct: 125 CVMGGN-MYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQV 175

[Close]
BLAST of Cp4.1LG15g07190 vs. TrEMBL
Match: K4CXY7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.9e-58
Identity = 111/178 (62.36%), Postives = 134/178 (75.28%), Query Frame = 1 

Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSL-IGVHPLDEKYYSSEVIKCKDGSRSFTID 60
           ME     +  S +LLLSF FFF    S   L IG+HPLDEKYY+S+VIKCKDGS SFTID
Sbjct: 1   METTTLTQLTSLLLLLSFFFFFHVSNSSTDLPIGIHPLDEKYYASDVIKCKDGSNSFTID 60

Query: 61  RLNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGN 120
           RLNDDFCDC+DGTDEPGT+AC  GKFYCRN+GSTP+FLFSSRVND ICDCCDGSDEYD N
Sbjct: 61  RLNDDFCDCIDGTDEPGTAACPSGKFYCRNVGSTPKFLFSSRVNDDICDCCDGSDEYDSN 120

Query: 121 IFCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 178
           + CPNTCVMGG+ +Y+   Y S  + +D +  +   E+   D   RL GLK+++++QV
Sbjct: 121 VNCPNTCVMGGDFSYQTRRYRSRRKHLDRVGGRNANEVNMADSAQRLKGLKILVLVQV 178

[Close]
BLAST of Cp4.1LG15g07190 vs. TrEMBL
Match: V4W239_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016674mg PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.4e-58
Identity = 111/167 (66.47%), Postives = 129/167 (77.25%), Query Frame = 1 

Query: 11  SFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCVD 70
           + + L+S CF    V+   SL+GVHPLDEKY+S EVIKCKDGS+SFT DRLND+FCDC+D
Sbjct: 8   NLIPLISLCFLVVFVQCKSSLLGVHPLDEKYFSKEVIKCKDGSKSFTRDRLNDNFCDCID 67

Query: 71  GTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGG 130
           GTDEPGTSAC  GKFYC N+GSTP+F+FSSRVND ICDCCDGSDEYD +I CPNTCVMGG
Sbjct: 68  GTDEPGTSACPAGKFYCGNVGSTPQFIFSSRVNDRICDCCDGSDEYDSSIKCPNTCVMGG 127

Query: 131 NAAYKNSYYISTSRDVDVIN-RKVKEEITKEDLFHRLIGLKLVIILQ 177
           N  YK   YIST  D   I+ R  K  + KEDL  RL  +K+V+ILQ
Sbjct: 128 NIEYKAQSYISTINDAGSIDARGAKIPVNKEDLIERLKDVKMVVILQ 174

[Close]
BLAST of Cp4.1LG15g07190 vs. TrEMBL
Match: V4U799_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016674mg PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.4e-58
Identity = 111/167 (66.47%), Postives = 129/167 (77.25%), Query Frame = 1 

Query: 11  SFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCVD 70
           + + L+S CF    V+   SL+GVHPLDEKY+S EVIKCKDGS+SFT DRLND+FCDC+D
Sbjct: 8   NLIPLISLCFLVVFVQCKSSLLGVHPLDEKYFSKEVIKCKDGSKSFTRDRLNDNFCDCID 67

Query: 71  GTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGG 130
           GTDEPGTSAC  GKFYC N+GSTP+F+FSSRVND ICDCCDGSDEYD +I CPNTCVMGG
Sbjct: 68  GTDEPGTSACPAGKFYCGNVGSTPQFIFSSRVNDRICDCCDGSDEYDSSIKCPNTCVMGG 127

Query: 131 NAAYKNSYYISTSRDVDVIN-RKVKEEITKEDLFHRLIGLKLVIILQ 177
           N  YK   YIST  D   I+ R  K  + KEDL  RL  +K+V+ILQ
Sbjct: 128 NIEYKAQSYISTINDAGSIDARGAKIPVNKEDLIERLKDVKMVVILQ 174

[Close]
BLAST of Cp4.1LG15g07190 vs. TrEMBL
Match: M1APM4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400010561 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.4e-58
Identity = 110/177 (62.15%), Postives = 132/177 (74.58%), Query Frame = 1 

Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60
           ME     +  S +LLLSF FF  S  S    IG+HPLDEKYY+S+VIKCKDGS SFTIDR
Sbjct: 1   METTTLTQLTSLLLLLSFFFFHVSNSSTDLPIGIHPLDEKYYASDVIKCKDGSNSFTIDR 60

Query: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120
           LNDDFCDC+DGTDEPGT+AC  GKFYCRN+GSTP+FLFSSRVND ICDCCDGSDEYD + 
Sbjct: 61  LNDDFCDCIDGTDEPGTAACPSGKFYCRNVGSTPKFLFSSRVNDDICDCCDGSDEYDSDA 120

Query: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 178
            CPNTCVMGG+ +Y+   Y S  + +D I  +   E+   D   RL GLK+++++QV
Sbjct: 121 NCPNTCVMGGDFSYQTRRYRSRRKHLDRIGGRNANEVNMADSAQRLKGLKILVLVQV 177

[Close]
BLAST of Cp4.1LG15g07190 vs. TAIR10
Match: AT2G42390.1 (AT2G42390.1 protein kinase C substrate, heavy chain-related)

HSP 1 Score: 198.7 bits (504), Expect = 3.4e-51
Identity = 99/175 (56.57%), Postives = 124/175 (70.86%), Query Frame = 1 

Query: 13  VLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCVDGT 72
           VL  S      SV S   L+GVHPLDEKY+ S+VIKCKDGS+SFT DRLND+FCDC+DGT
Sbjct: 7   VLCSSLAVVVISVASTSPLVGVHPLDEKYFDSDVIKCKDGSKSFTRDRLNDNFCDCLDGT 66

Query: 73  DEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGGNA 132
           DEPGTSAC  GKFYCRN+GS+P+F++SSRVND ICDCCDGSDEY+ +I CPNTC+MGGN 
Sbjct: 67  DEPGTSACPNGKFYCRNIGSSPKFVYSSRVNDRICDCCDGSDEYESSIHCPNTCIMGGNV 126

Query: 133 AYKNSYYISTSRDVDVINRKV------KEEIT---KEDLFHRLIGLKLVIILQVL 179
               +Y      ++  I+ ++      KE  T    +D+   L G+KLV  LQ++
Sbjct: 127 ----NYIYKPRANLKSIHLQLGSTPHPKEFYTIGNLQDMVKNLQGMKLVFALQMV 177

[Close]
BLAST of Cp4.1LG15g07190 vs. TAIR10
Match: AT5G56360.1 (AT5G56360.1 calmodulin-binding protein)

HSP 1 Score: 168.3 bits (425), Expect = 4.9e-42
Identity = 81/128 (63.28%), Postives = 93/128 (72.66%), Query Frame = 1 

Query: 10  MSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYY-SSEVIKCKDGSRSFTIDRLNDDFCDC 69
           +SF+LLL+     +S       +G+ P DEKYY SS  IKCKDGS+ FT  +LNDDFCDC
Sbjct: 16  LSFLLLLASAIRSSSSPPNDPFLGISPQDEKYYKSSSEIKCKDGSKKFTKAQLNDDFCDC 75

Query: 70  VDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVM 129
            DGTDEPGTSAC  GKFYCRN G +P  LFSSRVND ICDCCDGSDEYDG++ C NTC  
Sbjct: 76  SDGTDEPGTSACPTGKFYCRNAGHSPVILFSSRVNDGICDCCDGSDEYDGHVSCQNTCWE 135

Query: 130 GGNAAYKN 137
            G AA +N
Sbjct: 136 AGKAAREN 143

[Close]
BLAST of Cp4.1LG15g07190 vs. NCBI nr
Match: gi|659110908|ref|XP_008455474.1| (PREDICTED: glucosidase 2 subunit beta isoform X1 [Cucumis melo])

HSP 1 Score: 310.8 bits (795), Expect = 1.7e-81
Identity = 150/177 (84.75%), Postives = 161/177 (90.96%), Query Frame = 1 

Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60
           MEA  SPKS SFV LLS C FF SVR+ PS +GVHPLDEKYYSSEVIKCKDGSRSFTIDR
Sbjct: 1   MEA-RSPKSTSFVSLLSICLFFTSVRAAPSFLGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60

Query: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120
           LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRF+FSSRVNDHICDCCDGSDEY+GNI
Sbjct: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNI 120

Query: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 178
           FCPNTCVMGGN  YK++  +ST+RDVD++ RKVKEEITKEDLF +L GLKLVIILQV
Sbjct: 121 FCPNTCVMGGN-MYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQV 175

[Close]
BLAST of Cp4.1LG15g07190 vs. NCBI nr
Match: gi|449453541|ref|XP_004144515.1| (PREDICTED: glucosidase 2 subunit beta [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 1.1e-80
Identity = 148/172 (86.05%), Postives = 156/172 (90.70%), Query Frame = 1 

Query: 6   SPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDF 65
           SPKS SF  LLS C FF SVRS PS IGVHPLDEKYYSSEVIKCKDGSRSFTIDRLND+F
Sbjct: 5   SPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDNF 64

Query: 66  CDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNT 125
           CDCVDGTDEPGTSACARGKFYCRNMGSTPRF+FSSRVNDHICDCCDGSDEY+GNIFCPNT
Sbjct: 65  CDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNT 124

Query: 126 CVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 178
           CVMGGN  YK+   IST+RDVD++ RKVKEEITKEDLF +L GLKLVIILQV
Sbjct: 125 CVMGGN-MYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQV 175

[Close]
BLAST of Cp4.1LG15g07190 vs. NCBI nr
Match: gi|970055126|ref|XP_015089213.1| (PREDICTED: glucosidase 2 subunit beta [Solanum pennellii])

HSP 1 Score: 235.7 bits (600), Expect = 7.0e-59
Identity = 110/177 (62.15%), Postives = 134/177 (75.71%), Query Frame = 1 

Query: 1   MEAGHSPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDR 60
           ME     +  S +LLLSF FF  S  S    IG+HPLDEKYY+S+VIKCKDGS+SFTIDR
Sbjct: 1   METTTLTQLTSLLLLLSFFFFHVSNSSTDFPIGIHPLDEKYYASDVIKCKDGSKSFTIDR 60

Query: 61  LNDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNI 120
           LNDDFCDC+DGTDEPGT+AC  GKFYCRN+GSTP+FLFSSRVND ICDCCDGSDEYD N+
Sbjct: 61  LNDDFCDCIDGTDEPGTAACPSGKFYCRNVGSTPKFLFSSRVNDDICDCCDGSDEYDSNV 120

Query: 121 FCPNTCVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQV 178
            CPNTCVMGG+ +Y+   Y S  + +D +  +   E+   D   RL GLK+++++QV
Sbjct: 121 NCPNTCVMGGDFSYQTRRYRSRRKHLDRVGGRNANEVIMADSAQRLKGLKILVLVQV 177

[Close]
BLAST of Cp4.1LG15g07190 vs. NCBI nr
Match: gi|568829492|ref|XP_006469056.1| (PREDICTED: glucosidase 2 subunit beta isoform X2 [Citrus sinensis])

HSP 1 Score: 235.0 bits (598), Expect = 1.2e-58
Identity = 111/168 (66.07%), Postives = 130/168 (77.38%), Query Frame = 1 

Query: 11  SFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCVD 70
           + + L+S CF    V+   SL+GVHPLDEKY+S EVIKCKDGS+SFT DRLND+FCDC+D
Sbjct: 8   NLIPLMSLCFLVVFVQCKSSLLGVHPLDEKYFSKEVIKCKDGSKSFTRDRLNDNFCDCID 67

Query: 71  GTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTCVMGG 130
           GTDEPGTSAC  GKFYC N+GSTPRF+FSSRVND ICDCCDGSDEYD +I CPNTCVMGG
Sbjct: 68  GTDEPGTSACPAGKFYCGNVGSTPRFIFSSRVNDRICDCCDGSDEYDSSIKCPNTCVMGG 127

Query: 131 NAAYKNSYYISTSRDVDVIN-RKVKEEITKEDLFHRLIGLKLVIILQV 178
           N  YK   YIST  D   I+ R  K  + KEDL  RL  +K+V++LQ+
Sbjct: 128 NIEYKAQSYISTINDAGSIDARGAKIPVNKEDLIERLKDVKMVVVLQL 175

[Close]
BLAST of Cp4.1LG15g07190 vs. NCBI nr
Match: gi|1009165873|ref|XP_015901278.1| (PREDICTED: glucosidase 2 subunit beta-like [Ziziphus jujuba])

HSP 1 Score: 234.2 bits (596), Expect = 2.0e-58
Identity = 114/172 (66.28%), Postives = 137/172 (79.65%), Query Frame = 1 

Query: 11  SFVLLLSFCFF--FASVRS--VPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFC 70
           + VLLLS CF   F+ VRS  VP L+G HPLDEKY++S+VIKCKDGSR FT DRLND+FC
Sbjct: 4   ALVLLLSICFLLPFSFVRSSSVPPLLGAHPLDEKYFASKVIKCKDGSRVFTRDRLNDNFC 63

Query: 71  DCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNTC 130
           DCVDGTDEPGTSAC  GKFYCRN+GSTP+F+FSSRVND  CDCCDGSDEYDG+I CP+TC
Sbjct: 64  DCVDGTDEPGTSACPAGKFYCRNLGSTPQFIFSSRVNDRFCDCCDGSDEYDGSINCPHTC 123

Query: 131 VMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVL 179
           +MGG+  Y++ + IS   D+  I  + K  I+ +DL  +L GLK+VIILQVL
Sbjct: 124 IMGGSVVYESHHGISRVSDLGNIYGETKNRISLDDLIEKLKGLKVVIILQVL 175

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g07190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSL4_ARATH8.6e-4163.28Glucosidase 2 subunit beta OS=Arabidopsis thaliana GN=PSL4 PE=2 SV=1[more]
GLU2B_ORYSJ2.6e-3759.50Glucosidase 2 subunit beta OS=Oryza sativa subsp. japonica GN=Os01g0276800 PE=2 ... [more]
GLU2B_ORYSI3.4e-3757.60Glucosidase 2 subunit beta OS=Oryza sativa subsp. indica GN=OsI_01383 PE=3 SV=1[more]
GLU2B_MOUSE3.0e-2553.49Glucosidase 2 subunit beta OS=Mus musculus GN=Prkcsh PE=1 SV=1[more]
GLU2B_HUMAN3.9e-2546.61Glucosidase 2 subunit beta OS=Homo sapiens GN=PRKCSH PE=1 SV=2[more]
BLAST of Cp4.1LG15g07190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1G3_CUCSA7.8e-8186.05Uncharacterized protein OS=Cucumis sativus GN=Csa_7G041350 PE=4 SV=1[more]
K4CXY7_SOLLC1.9e-5862.36Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
V4W239_9ROSI2.4e-5866.47Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016674mg PE=4 SV=1[more]
V4U799_9ROSI2.4e-5866.47Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016674mg PE=4 SV=1[more]
M1APM4_SOLTU5.4e-5862.15Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400010561 PE=4 SV=1[more]
BLAST of Cp4.1LG15g07190 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G42390.13.4e-5156.57 protein kinase C substrate, heavy chain-related[more]
AT5G56360.14.9e-4263.28 calmodulin-binding protein[more]
BLAST of Cp4.1LG15g07190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110908|ref|XP_008455474.1|1.7e-8184.75PREDICTED: glucosidase 2 subunit beta isoform X1 [Cucumis melo][more]
gi|449453541|ref|XP_004144515.1|1.1e-8086.05PREDICTED: glucosidase 2 subunit beta [Cucumis sativus][more]
gi|970055126|ref|XP_015089213.1|7.0e-5962.15PREDICTED: glucosidase 2 subunit beta [Solanum pennellii][more]
gi|568829492|ref|XP_006469056.1|1.2e-5866.07PREDICTED: glucosidase 2 subunit beta isoform X2 [Citrus sinensis][more]
gi|1009165873|ref|XP_015901278.1|2.0e-5866.28PREDICTED: glucosidase 2 subunit beta-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR028146PRKCSH_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006491 N-glycan processing
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g07190.1Cp4.1LG15g07190.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028146Glucosidase II beta subunit, N-terminalPFAMPF12999PRKCSH-likecoord: 24..129
score: 3.0
NoneNo IPR availablePANTHERPTHR12630N-LINKED OLIGOSACCHARIDE PROCESSINGcoord: 1..178
score: 4.5
NoneNo IPR availablePANTHERPTHR12630:SF9SUBFAMILY NOT NAMEDcoord: 1..178
score: 4.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g07190Cucsa.148850Cucumber (Gy14) v1cgycpeB0392
Cp4.1LG15g07190CmaCh19G009020Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g07190CmoCh19G009250Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g07190Cla015628Watermelon (97103) v1cpewmB268
Cp4.1LG15g07190Csa7G041350Cucumber (Chinese Long) v2cpecuB257
Cp4.1LG15g07190MELO3C018846Melon (DHL92) v3.5.1cpemeB223
Cp4.1LG15g07190ClCG02G002220Watermelon (Charleston Gray)cpewcgB233
Cp4.1LG15g07190CSPI07G03400Wild cucumber (PI 183967)cpecpiB257
Cp4.1LG15g07190Lsi11G014200Bottle gourd (USVL1VR-Ls)cpelsiB199
Cp4.1LG15g07190MELO3C018846.2Melon (DHL92) v3.6.1cpemedB261
Cp4.1LG15g07190CsaV3_7G003280Cucumber (Chinese Long) v3cpecucB0322
Cp4.1LG15g07190Bhi05G001212Wax gourdcpewgoB0326
Cp4.1LG15g07190CsGy7G003060Cucumber (Gy14) v2cgybcpeB910
Cp4.1LG15g07190Carg04182Silver-seed gourdcarcpeB0281
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g07190Wax gourdcpewgoB0336
Cp4.1LG15g07190Cucurbita pepo (Zucchini)cpecpeB255
Cp4.1LG15g07190Cucurbita pepo (Zucchini)cpecpeB267
Cp4.1LG15g07190Cucurbita pepo (Zucchini)cpecpeB275
Cp4.1LG15g07190Cucurbita maxima (Rimu)cmacpeB115
Cp4.1LG15g07190Cucurbita maxima (Rimu)cmacpeB559
Cp4.1LG15g07190Cucurbita maxima (Rimu)cmacpeB617
Cp4.1LG15g07190Cucurbita moschata (Rifu)cmocpeB093
Cp4.1LG15g07190Cucurbita moschata (Rifu)cmocpeB515
Cp4.1LG15g07190Wild cucumber (PI 183967)cpecpiB237
Cp4.1LG15g07190Cucumber (Chinese Long) v2cpecuB233
Cp4.1LG15g07190Bottle gourd (USVL1VR-Ls)cpelsiB194
Cp4.1LG15g07190Watermelon (97103) v1cpewmB267
Cp4.1LG15g07190Melon (DHL92) v3.5.1cpemeB214
Cp4.1LG15g07190Cucumber (Gy14) v2cgybcpeB187
Cp4.1LG15g07190Cucumber (Chinese Long) v3cpecucB0290