Carg03933 (gene) Silver-seed gourd

Overview
NameCarg03933
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionATP synthase subunit b', chloroplastic
LocationCucurbita_argyrosperma_scaffold_011 : 855797 .. 856456 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAATGTAATAATGGCCTCCTCCAAACCCCTCTCCCCGCCCCCTTCCATCGCCTCCACCAAAACCCCCAAATTCTCCATTCCCAAAACCCTAACCCTAACCCTAACCCCCACGATTCTCAAAAACCCCCAATTCGTCTCCCTCTCCACCACCACTCTCAAATCCCTCTCCCTCATCGCCGCCACATCGCTCTCCTTCGCGCCTCCTTCCCTCGCCGAAGAGATCGAAAAGGCCGCGCTCTTCGATTTCAACCTCACTCTTCCGATCATGATGGCGCAATTCCTCCTCCTCATGGTCGGTCTCGACAAACTCTACTTCTCTCCACTCGGCAAATTCATGGACGAAAGAGACGCCGCCATTAAAGAGAAGCTCAACAGCGTTAAAGACACATCCGAGGAGGTGAAGCAGTTGGATGAACAAGCCGCAGCGGTGATGAGGGCGGCCAGAGCGGAGATTTCAGCGGCGCTTAACAAGATGAAGAAGGAAACTCAGGCAGAAGTGGAGGAGAAACTGGCGGAGGGAAGGAAGAAAATCGATGCGGAGTTGCAGGAGGCATTGGCGAGCTTGGAGAATCAGAAGGTGGAGACCATTAAATCCCTGGATGCTCAAATTGCAGCTCTTAGCGACGAAATCGTCAAGAAGGTTCTTCCCGTTTAG

mRNA sequence

ATGGCGAATGTAATAATGGCCTCCTCCAAACCCCTCTCCCCGCCCCCTTCCATCGCCTCCACCAAAACCCCCAAATTCTCCATTCCCAAAACCCTAACCCTAACCCTAACCCCCACGATTCTCAAAAACCCCCAATTCGTCTCCCTCTCCACCACCACTCTCAAATCCCTCTCCCTCATCGCCGCCACATCGCTCTCCTTCGCGCCTCCTTCCCTCGCCGAAGAGATCGAAAAGGCCGCGCTCTTCGATTTCAACCTCACTCTTCCGATCATGATGGCGCAATTCCTCCTCCTCATGGTCGGTCTCGACAAACTCTACTTCTCTCCACTCGGCAAATTCATGGACGAAAGAGACGCCGCCATTAAAGAGAAGCTCAACAGCGTTAAAGACACATCCGAGGAGGTGAAGCAGTTGGATGAACAAGCCGCAGCGGTGATGAGGGCGGCCAGAGCGGAGATTTCAGCGGCGCTTAACAAGATGAAGAAGGAAACTCAGGCAGAAGTGGAGGAGAAACTGGCGGAGGGAAGGAAGAAAATCGATGCGGAGTTGCAGGAGGCATTGGCGAGCTTGGAGAATCAGAAGGTGGAGACCATTAAATCCCTGGATGCTCAAATTGCAGCTCTTAGCGACGAAATCGTCAAGAAGGTTCTTCCCGTTTAG

Coding sequence (CDS)

ATGGCGAATGTAATAATGGCCTCCTCCAAACCCCTCTCCCCGCCCCCTTCCATCGCCTCCACCAAAACCCCCAAATTCTCCATTCCCAAAACCCTAACCCTAACCCTAACCCCCACGATTCTCAAAAACCCCCAATTCGTCTCCCTCTCCACCACCACTCTCAAATCCCTCTCCCTCATCGCCGCCACATCGCTCTCCTTCGCGCCTCCTTCCCTCGCCGAAGAGATCGAAAAGGCCGCGCTCTTCGATTTCAACCTCACTCTTCCGATCATGATGGCGCAATTCCTCCTCCTCATGGTCGGTCTCGACAAACTCTACTTCTCTCCACTCGGCAAATTCATGGACGAAAGAGACGCCGCCATTAAAGAGAAGCTCAACAGCGTTAAAGACACATCCGAGGAGGTGAAGCAGTTGGATGAACAAGCCGCAGCGGTGATGAGGGCGGCCAGAGCGGAGATTTCAGCGGCGCTTAACAAGATGAAGAAGGAAACTCAGGCAGAAGTGGAGGAGAAACTGGCGGAGGGAAGGAAGAAAATCGATGCGGAGTTGCAGGAGGCATTGGCGAGCTTGGAGAATCAGAAGGTGGAGACCATTAAATCCCTGGATGCTCAAATTGCAGCTCTTAGCGACGAAATCGTCAAGAAGGTTCTTCCCGTTTAG

Protein sequence

MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSLIAATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAAIKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKKIDAELQEALASLENQKVETIKSLDAQIAALSDEIVKKVLPV
Homology
[Close]
BLAST of Carg03933 vs. NCBI nr
Match: XP_022951454.1 (ATP synthase subunit b', chloroplastic [Cucurbita moschata])

HSP 1 Score: 308.5 bits (789), Expect = 1.8e-80
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSLI 60
           MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSLI
Sbjct: 1   MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSLI 60

Query: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120
           AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA
Sbjct: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120

Query: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXX 180
           IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV 220
           XXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV
Sbjct: 181 XXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV 219

[Close]
BLAST of Carg03933 vs. NCBI nr
Match: XP_023538440.1 (ATP synthase subunit b', chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.0 bits (785), Expect = 5.2e-80
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSLI 60
           MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNP+FVSLSTTTLKSLSLI
Sbjct: 1   MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPKFVSLSTTTLKSLSLI 60

Query: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120
           AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA
Sbjct: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120

Query: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXX 180
           IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV 220
           XXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV
Sbjct: 181 XXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV 219

[Close]
BLAST of Carg03933 vs. NCBI nr
Match: XP_023002493.1 (ATP synthase subunit b', chloroplastic [Cucurbita maxima])

HSP 1 Score: 302.8 bits (774), Expect = 9.8e-79
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0 

Query: 1   MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSLI 60
           MANVIMASSKPLS PPSIASTKTPKFSIPKTLTLTLTPTILKNPQF+SLST+TLKSLSLI
Sbjct: 1   MANVIMASSKPLSAPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFLSLSTSTLKSLSLI 60

Query: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120
           AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA
Sbjct: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120

Query: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXX 180
           IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV 220
           XXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV
Sbjct: 181 XXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV 219

[Close]
BLAST of Carg03933 vs. NCBI nr
Match: XP_004138722.1 (PREDICTED: ATP synthase subunit b', chloroplastic [Cucumis sativus] >KGN62960.1 hypothetical protein Csa_2G381850 [Cucumis sativus])

HSP 1 Score: 263.1 bits (671), Expect = 8.6e-67
Identity = 193/219 (88.13%), Postives = 197/219 (89.95%), Query Frame = 0 

Query: 1   MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSLI 60
           MANVIMASSKP SPP SI S KTPKFSIPK  TLTL P  LK PQ +SLST+TLKSLSL 
Sbjct: 1   MANVIMASSKPPSPPLSI-SNKTPKFSIPK--TLTLIPQFLKKPQSISLSTSTLKSLSLF 60

Query: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120
           AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERD A
Sbjct: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDTA 120

Query: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXX 180
           IKEKLNSVKDTSEEVKQLD+QAAAVMRAARAEIS  L   XXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IKEKLNSVKDTSEEVKQLDDQAAAVMRAARAEISAALTKMXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV 220
           XXXXXXXXXX   K ETIKSLDAQIAALSD+IVKKVLPV
Sbjct: 181 XXXXXXXXXXENQKAETIKSLDAQIAALSDDIVKKVLPV 216

[Close]
BLAST of Carg03933 vs. NCBI nr
Match: XP_008445233.1 (PREDICTED: ATP synthase subunit b', chloroplastic [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 4.4e-63
Identity = 192/219 (87.67%), Postives = 196/219 (89.50%), Query Frame = 0 

Query: 1   MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSLI 60
           MANVIMASSKPLSPP SI S KTPKFSIPK  TLTL P  LKNPQ +SLST+TLKSLSL 
Sbjct: 1   MANVIMASSKPLSPPLSI-SNKTPKFSIPK--TLTLIPQFLKNPQSISLSTSTLKSLSLF 60

Query: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120
           AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDK+YFSPLGKFMDERDAA
Sbjct: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAA 120

Query: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXX 180
           IKEKL+SVKDTSE VKQLDEQAAAVMRAARAEIS  LN XXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IKEKLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV 220
           XXXXXXXXXXXXX         AQIAALSDEIVKKVLPV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXAQIAALSDEIVKKVLPV 216

[Close]
BLAST of Carg03933 vs. TAIR10
Match: AT4G32260.1 (ATPase, F0 complex, subunit B/B', bacterial/chloroplast)

HSP 1 Score: 145.6 bits (366), Expect = 3.6e-35
Identity = 96/156 (61.54%), Postives = 115/156 (73.72%), Query Frame = 0 

Query: 2   ANVIMASSKPLSPPPSIASTKTP-KFSIPKTLTLTLTPTILKN-----PQFVSLSTTTLK 61
           AN IMASSKPL    S++S + P +  IPK   L   P  L +      + +SLS+ T K
Sbjct: 3   ANSIMASSKPLI---SLSSNQQPNRVQIPKFAKLPQIPKSLTSSTDLRSKALSLSSATAK 62

Query: 62  SLSLIAATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMD 121
           SL+LIAA    FAPPS+AE +EKA LFDFNLTLPI++ +FL LM  LDK+Y+SPLG FMD
Sbjct: 63  SLALIAA----FAPPSMAEAMEKAQLFDFNLTLPIIVVEFLFLMFALDKVYYSPLGNFMD 122

Query: 122 ERDAAIKEKLNSVKDTSEEVKQLDEQAAAVMRAARA 152
           +RDA+IKEKL SVKDTS EVK+LDEQAAAVMRAARA
Sbjct: 123 QRDASIKEKLASVKDTSTEVKELDEQAAAVMRAARA 151

[Close]
BLAST of Carg03933 vs. Swiss-Prot
Match: sp|P31853|ATPX_SPIOL (ATP synthase subunit b', chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPG PE=1 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 3.4e-30
Identity = 140/223 (62.78%), Postives = 163/223 (73.09%), Query Frame = 0 

Query: 1   MANVIMA-SSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSL 60
           MAN+++A SSK L            KF + KT  L L+P  L  P    L+ + LKS ++
Sbjct: 1   MANMLVASSSKTLPXXXXXXXXXXXKFPLLKTPLLKLSPPQL--PPLKHLNLSVLKSAAI 60

Query: 61  IAA-TSLSF--APPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDE 120
            A   +LSF    PSLAEEIEKA+LFDFNLTLPI+MA+FL LM  LDK+Y++PLG FMD+
Sbjct: 61  TATPLTLSFLLPYPSLAEEIEKASLFDFNLTLPIIMAEFLFLMFALDKIYYTPLGDFMDK 120

Query: 121 RDAAIKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXX 180
           RDA+IKE+L+ VKDTS EVKQL+EQA AVMRAARAE  XX  XXXXXXXXXXXXXXXXXX
Sbjct: 121 RDASIKEQLSGVKDTSSEVKQLEEQANAVMRAARAEXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV 220
           XXXXXXXXXXXXXXXXX           I+ALSD+IVKKVLPV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXISALSDDIVKKVLPV 221

[Close]
BLAST of Carg03933 vs. Swiss-Prot
Match: sp|A8J785|ATPX_CHLRE (ATP synthase subunit b', chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=ATPG PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.9e-18
Identity = 58/163 (35.58%), Postives = 88/163 (53.99%), Query Frame = 0 

Query: 56  SLSLIAATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMD 115
           +LS I A +L   P +     E   +FDFNLTLP+M  +FLLLMV L+K +F+P+GK +D
Sbjct: 46  ALSAIVANALMAMPAA----AEAGKIFDFNLTLPVMAGEFLLLMVFLEKTWFTPVGKVLD 105

Query: 116 ERDAAIKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXX 175
           ERD  I+ KL SVKD + +V +L  +A  ++++AR+++S  +N                 
Sbjct: 106 ERDNLIRSKLGSVKDNTGDVDKLVLEAETILKSARSDVSAMINTKKAAKQSELDKTYNEA 165

Query: 176 XXXXXXXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLP 219
                                 +KSLDAQ+  +S E++K+VLP
Sbjct: 166 KAKITAEVESSIAGLEQESASMLKSLDAQVDKISAEVLKRVLP 204

[Close]
BLAST of Carg03933 vs. Swiss-Prot
Match: sp|Q112Z3|ATPX_TRIEI (ATP synthase subunit b' OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=atpG PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.0e-08
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 0 

Query: 71  SLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAAIKEKLNSVKD 130
           ++ E  EK  LFD N TLP+M  QFLLL   LDK+++ PLGK +D R   I+E     K+
Sbjct: 9   AVEEVAEKGGLFDINATLPLMAIQFLLLAFVLDKIFYKPLGKAIDSRADYIRENQVKAKE 68

Query: 131 TSEEVKQLDEQ 142
              + KQL EQ
Sbjct: 69  RLAKAKQLAEQ 79

[Close]
BLAST of Carg03933 vs. Swiss-Prot
Match: sp|P51245|ATPX_PORPU (ATP synthase subunit b', chloroplastic OS=Porphyra purpurea OX=2787 GN=atpG PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.2e-07
Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 0 

Query: 67  FAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAAIKEKLN 126
           + P  LAEEIE   LFDFN TLP+M  QFL+LM+ L+ +++ P+ K +DERD  I+  L 
Sbjct: 3   YLPLLLAEEIE-GGLFDFNGTLPLMALQFLILMLLLNTIFYKPVTKILDERDEYIRTTLT 62

Query: 127 SVKD----TSEEVKQLDEQAAAVMRAARAEIS 155
           +         E   + +E  +   R A+A+I+
Sbjct: 63  TASSMLVKADELAAKYEEDLSKARRDAQAKIA 93

[Close]
BLAST of Carg03933 vs. Swiss-Prot
Match: sp|P48085|ATPX_CYAPA (ATP synthase B' chain, cyanelle OS=Cyanophora paradoxa OX=2762 GN=atpG PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 8.9e-07
Identity = 43/152 (28.29%), Postives = 67/152 (44.08%), Query Frame = 0 

Query: 72  LAEEIEKA----ALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAAIKEKLNS 131
           LA E E A     LFDF+ TLP+MM Q L+LM+ L+ +++ PL K +DER   I+   N 
Sbjct: 8   LAIETEAAKPEGGLFDFDATLPVMMVQLLVLMLILNAVFYKPLIKILDERKEYIQSNFNE 67

Query: 132 VKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 191
            +    +  +L  Q    +  AR   S   N                             
Sbjct: 68  AEKCLAQAAELTTQYETKITDARQNASKLTNTTRSEIQRFVSEKLEEAQKKADSELASAT 127

Query: 192 XXXXXXKVETIKSLDAQIAALSDEIVKKVLPV 220
                 K E +KSL++++  LS +I++K+L +
Sbjct: 128 NKLELQKDEALKSLESEVQTLSTKILEKLLGI 159

[Close]
BLAST of Carg03933 vs. TrEMBL
Match: tr|A0A0A0LM10|A0A0A0LM10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381850 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 5.7e-67
Identity = 193/219 (88.13%), Postives = 197/219 (89.95%), Query Frame = 0 

Query: 1   MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSLI 60
           MANVIMASSKP SPP SI S KTPKFSIPK  TLTL P  LK PQ +SLST+TLKSLSL 
Sbjct: 1   MANVIMASSKPPSPPLSI-SNKTPKFSIPK--TLTLIPQFLKKPQSISLSTSTLKSLSLF 60

Query: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120
           AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERD A
Sbjct: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDTA 120

Query: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXX 180
           IKEKLNSVKDTSEEVKQLD+QAAAVMRAARAEIS  L   XXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IKEKLNSVKDTSEEVKQLDDQAAAVMRAARAEISAALTKMXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV 220
           XXXXXXXXXX   K ETIKSLDAQIAALSD+IVKKVLPV
Sbjct: 181 XXXXXXXXXXENQKAETIKSLDAQIAALSDDIVKKVLPV 216

[Close]
BLAST of Carg03933 vs. TrEMBL
Match: tr|A0A1S3BD20|A0A1S3BD20_CUCME (ATP synthase subunit b', chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488320 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.9e-63
Identity = 192/219 (87.67%), Postives = 196/219 (89.50%), Query Frame = 0 

Query: 1   MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSLI 60
           MANVIMASSKPLSPP SI S KTPKFSIPK  TLTL P  LKNPQ +SLST+TLKSLSL 
Sbjct: 1   MANVIMASSKPLSPPLSI-SNKTPKFSIPK--TLTLIPQFLKNPQSISLSTSTLKSLSLF 60

Query: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120
           AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDK+YFSPLGKFMDERDAA
Sbjct: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAA 120

Query: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXXX 180
           IKEKL+SVKDTSE VKQLDEQAAAVMRAARAEIS  LN XXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IKEKLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV 220
           XXXXXXXXXXXXX         AQIAALSDEIVKKVLPV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXAQIAALSDEIVKKVLPV 216

[Close]
BLAST of Carg03933 vs. TrEMBL
Match: tr|A0A067KBI4|A0A067KBI4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07152 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.6e-48
Identity = 167/220 (75.91%), Postives = 177/220 (80.45%), Query Frame = 0 

Query: 1   MANVIMASSKPLSPPPS-IASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSL 60
           MA +IMASSKPL P  S I +T  PK  IP+       P + K  Q  SLS++TLKSLSL
Sbjct: 1   MAAMIMASSKPLIPLSSAIPTTTRPKIQIPQLSLPVKLPKVTKT-QLASLSSSTLKSLSL 60

Query: 61  IAATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDA 120
           +AATS +FAPPSLAEEIEKAALFDFNLTLPIMM QFLLLMVGLDK+YFSPLGKFMDERDA
Sbjct: 61  LAATSFTFAPPSLAEEIEKAALFDFNLTLPIMMVQFLLLMVGLDKIYFSPLGKFMDERDA 120

Query: 121 AIKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLNXXXXXXXXXXXXXXXXXXXXX 180
           AIKEKLNSVKDTSEEVKQL+EQAAAVMRAARAEIS  LN XXXXXXXXXXXXXXXXXXXX
Sbjct: 121 AIKEKLNSVKDTSEEVKQLEEQAAAVMRAARAEISAALNKXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXKVETIKSLDAQIAALSDEIVKKVLPV 220
           XXXXXXXXXXXXXX               SDEIVKKVLPV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDEIVKKVLPV 219

[Close]
BLAST of Carg03933 vs. TrEMBL
Match: tr|A0A2C9UCX5|A0A2C9UCX5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G122700 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.7e-45
Identity = 117/160 (73.12%), Postives = 132/160 (82.50%), Query Frame = 0 

Query: 1   MANVIMASSKPLSP-PPSIASTKTPKFSIPK-TLTLTLTPTILKNPQFVSLSTTTLKSLS 60
           MA VIMASSKP+ P   S+ +T  P+  IP+ +L + + P I K  Q   LS++TLKSLS
Sbjct: 43  MAAVIMASSKPIIPLSSSLPTTTRPRLQIPQLSLPIKILPKITKT-QLARLSSSTLKSLS 102

Query: 61  LIAATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERD 120
           L+AATS +FAPPSLAEEIEKAALFDF+LTLPIMM QFL+LMV LDKLYFSPLGKFMDERD
Sbjct: 103 LLAATSFTFAPPSLAEEIEKAALFDFDLTLPIMMVQFLILMVTLDKLYFSPLGKFMDERD 162

Query: 121 AAIKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLN 159
           AAIKEKL SVKDTS EVKQL+EQAAAVMRAARAEIS  LN
Sbjct: 163 AAIKEKLGSVKDTSTEVKQLEEQAAAVMRAARAEISAALN 201

[Close]
BLAST of Carg03933 vs. TrEMBL
Match: tr|A0A2C9W5S7|A0A2C9W5S7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G013900 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.4e-44
Identity = 116/158 (73.42%), Postives = 129/158 (81.65%), Query Frame = 0 

Query: 1   MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSLI 60
           MA  IMASSKPL    S  +T+ PK  IP+ ++L +    +   Q  SLS++TLKSLSLI
Sbjct: 1   MATAIMASSKPLISTTSTTTTR-PKLHIPQ-ISLPIKLPKINKTQLHSLSSSTLKSLSLI 60

Query: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120
           AATS +FAPPSLAEEIEKAALFDF+LTLPIMM QFL+LMV LDKLYFSPLGKFMDERDAA
Sbjct: 61  AATSFTFAPPSLAEEIEKAALFDFDLTLPIMMVQFLILMVTLDKLYFSPLGKFMDERDAA 120

Query: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISXXLN 159
           IKEKL SVKDTS EVKQL+EQAAAVMRAARAEIS  LN
Sbjct: 121 IKEKLGSVKDTSAEVKQLEEQAAAVMRAARAEISAALN 156

The following BLAST results are available for this feature:
BLAST of Carg03933 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951454.11.8e-80100.00ATP synthase subunit b', chloroplastic [Cucurbita moschata][more]
XP_023538440.15.2e-8099.54ATP synthase subunit b', chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_023002493.19.8e-7998.63ATP synthase subunit b', chloroplastic [Cucurbita maxima][more]
XP_004138722.18.6e-6788.13PREDICTED: ATP synthase subunit b', chloroplastic [Cucumis sativus] >KGN62960.1 ... [more]
XP_008445233.14.4e-6387.67PREDICTED: ATP synthase subunit b', chloroplastic [Cucumis melo][more]
BLAST of Carg03933 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G32260.13.6e-3561.54ATPase, F0 complex, subunit B/B', bacterial/chloroplast[more]
BLAST of Carg03933 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P31853|ATPX_SPIOL3.4e-3062.78ATP synthase subunit b', chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPG PE=1... [more]
sp|A8J785|ATPX_CHLRE2.9e-1835.58ATP synthase subunit b', chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=A... [more]
sp|Q112Z3|ATPX_TRIEI8.0e-0846.48ATP synthase subunit b' OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN... [more]
sp|P51245|ATPX_PORPU5.2e-0739.13ATP synthase subunit b', chloroplastic OS=Porphyra purpurea OX=2787 GN=atpG PE=3... [more]
sp|P48085|ATPX_CYAPA8.9e-0728.29ATP synthase B' chain, cyanelle OS=Cyanophora paradoxa OX=2762 GN=atpG PE=3 SV=1[more]
BLAST of Carg03933 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LM10|A0A0A0LM10_CUCSA5.7e-6788.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381850 PE=3 SV=1[more]
tr|A0A1S3BD20|A0A1S3BD20_CUCME2.9e-6387.67ATP synthase subunit b', chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488320 P... [more]
tr|A0A067KBI4|A0A067KBI4_JATCU2.6e-4875.91Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07152 PE=3 SV=1[more]
tr|A0A2C9UCX5|A0A2C9UCX5_MANES2.7e-4573.13Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G122700 PE=3 SV=... [more]
tr|A0A2C9W5S7|A0A2C9W5S7_MANES1.4e-4473.42Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G013900 PE=3 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0045263proton-transporting ATP synthase complex, coupling factor F(o)
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR034679ATP_synth_b'
IPR002146ATP_synth_b/b'su_bac/chlpt
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03933-RACarg03933-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR33445FAMILY NOT NAMEDcoord: 60..218
IPR002146ATP synthase, F0 complex, subunit b/b', bacterial/chloroplastPFAMPF00430ATP-synt_Bcoord: 87..217
e-value: 2.1E-14
score: 53.6
IPR002146ATP synthase, F0 complex, subunit b/b', bacterial/chloroplastHAMAPMF_01398ATP_synth_b_bprimecoord: 82..219
score: 10.223
IPR034679ATP synthase, F0 complex, subunit b'HAMAPMF_01399ATP_synth_bprimecoord: 81..218
score: 19.927

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg03933Cla022333Watermelon (97103) v1carwmB0978
Carg03933Csa2G381850Cucumber (Chinese Long) v2carcuB0987
Carg03933MELO3C011269Melon (DHL92) v3.5.1carmeB0955
Carg03933ClCG08G013430Watermelon (Charleston Gray)carwcgB0958
Carg03933CSPI02G23620Wild cucumber (PI 183967)carcpiB1010
Carg03933Cucsa.162520Cucumber (Gy14) v1carcgyB1091
Carg03933CmoCh12G002930Cucurbita moschata (Rifu)carcmoB1310
Carg03933Lsi08G012120Bottle gourd (USVL1VR-Ls)carlsiB898
Carg03933Cp4.1LG07g02970Cucurbita pepo (Zucchini)carcpeB1368
Carg03933CsGy2G023380Cucumber (Gy14) v2carcgybB0960
Carg03933MELO3C011269.2Melon (DHL92) v3.6.1carmedB0961
Carg03933CsaV3_2G032160Cucumber (Chinese Long) v3carcucB1015
Carg03933Cla97C08G156800Watermelon (97103) v2carwmbB1034
Carg03933Bhi04G000775Wax gourdcarwgoB1145
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg03933Silver-seed gourdcarcarB168
Carg03933Silver-seed gourdcarcarB239
Carg03933Silver-seed gourdcarcarB558
Carg03933Silver-seed gourdcarcarB572
Carg03933Cucurbita maxima (Rimu)carcmaB1349
Carg03933Cucurbita maxima (Rimu)carcmaB1353
Carg03933Cucurbita maxima (Rimu)carcmaB1357
Carg03933Cucurbita moschata (Rifu)carcmoB1313
Carg03933Cucurbita moschata (Rifu)carcmoB1315
Carg03933Cucurbita moschata (Rifu)carcmoB1319
Carg03933Cucurbita pepo (Zucchini)carcpeB1352
Carg03933Cucurbita pepo (Zucchini)carcpeB1356
Carg03933Cucurbita pepo (Zucchini)carcpeB1363
Carg03933Cucurbita pepo (Zucchini)carcpeB1364
Carg03933Bottle gourd (USVL1VR-Ls)carlsiB893
Carg03933Watermelon (Charleston Gray)carwcgB0957
Carg03933Watermelon (Charleston Gray)carwcgB0951
Carg03933Watermelon (Charleston Gray)carwcgB0955
Carg03933Watermelon (97103) v1carwmB0980
Carg03933Watermelon (97103) v2carwmbB1033