Carg03844 (gene) Silver-seed gourd

Overview
NameCarg03844
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionethylene-responsive transcription factor TINY-like
LocationCucurbita_argyrosperma_scaffold_011 : 374172 .. 374816 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTCTGACTCGAACGCTGTTCCAAAGAAAATCAAGCGCATCAGAAACCCAGAATCCAATTCCGATTCGAATTCCAGCAAGCACCCAGTTTACAGAGGCGTCCGGATGCGAAATTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGAAAGAAATCCCGCATTTGGTTAGGAACTTTCCCCAGCCCTGAAATGGCAGCTCGAGCCCACGACGTCGCCGCCTTAAGCATCAAAGGCAACTCCGCCATCCTTAATTTCCCCGACCTCGTCCACCTCCTCCCCCGCCCTGTCTCTCTCGCCCCTCGCGACATCCAAGCCGCCGCCACCCAAGCCGCCCACATGCACAATCTATCTCCTAACAACATTCCCACCACCACCACCACCACCGACGACGCTTCCGACGCCTCCGATGAACTCACCGAAATCGTCCAGCTTCCCTCTCTCGGCACCACCTACGACGGCGACTGCGGCGACTCCTTCGTTTTCCTTGACTACTCAACAGAGGATTCCGCCGCCTGGCTTTACCCACCGCCGTGGCTACCATCTCTCGAGGATTACGATGAAATTCAAAACGACGGTAAGATGGGAATGGGAATGGGATTCATTTCCACCAATTTCAAAGGATTATTGTGGGATTATTAA

mRNA sequence

ATGAGCTCTGACTCGAACGCTGTTCCAAAGAAAATCAAGCGCATCAGAAACCCAGAATCCAATTCCGATTCGAATTCCAGCAAGCACCCAGTTTACAGAGGCGTCCGGATGCGAAATTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGAAAGAAATCCCGCATTTGGTTAGGAACTTTCCCCAGCCCTGAAATGGCAGCTCGAGCCCACGACGTCGCCGCCTTAAGCATCAAAGGCAACTCCGCCATCCTTAATTTCCCCGACCTCGTCCACCTCCTCCCCCGCCCTGTCTCTCTCGCCCCTCGCGACATCCAAGCCGCCGCCACCCAAGCCGCCCACATGCACAATCTATCTCCTAACAACATTCCCACCACCACCACCACCACCGACGACGCTTCCGACGCCTCCGATGAACTCACCGAAATCGTCCAGCTTCCCTCTCTCGGCACCACCTACGACGGCGACTGCGGCGACTCCTTCGTTTTCCTTGACTACTCAACAGAGGATTCCGCCGCCTGGCTTTACCCACCGCCGTGGCTACCATCTCTCGAGGATTACGATGAAATTCAAAACGACGGTAAGATGGGAATGGGAATGGGATTCATTTCCACCAATTTCAAAGGATTATTGTGGGATTATTAA

Coding sequence (CDS)

ATGAGCTCTGACTCGAACGCTGTTCCAAAGAAAATCAAGCGCATCAGAAACCCAGAATCCAATTCCGATTCGAATTCCAGCAAGCACCCAGTTTACAGAGGCGTCCGGATGCGAAATTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGAAAGAAATCCCGCATTTGGTTAGGAACTTTCCCCAGCCCTGAAATGGCAGCTCGAGCCCACGACGTCGCCGCCTTAAGCATCAAAGGCAACTCCGCCATCCTTAATTTCCCCGACCTCGTCCACCTCCTCCCCCGCCCTGTCTCTCTCGCCCCTCGCGACATCCAAGCCGCCGCCACCCAAGCCGCCCACATGCACAATCTATCTCCTAACAACATTCCCACCACCACCACCACCACCGACGACGCTTCCGACGCCTCCGATGAACTCACCGAAATCGTCCAGCTTCCCTCTCTCGGCACCACCTACGACGGCGACTGCGGCGACTCCTTCGTTTTCCTTGACTACTCAACAGAGGATTCCGCCGCCTGGCTTTACCCACCGCCGTGGCTACCATCTCTCGAGGATTACGATGAAATTCAAAACGACGGTAAGATGGGAATGGGAATGGGATTCATTTCCACCAATTTCAAAGGATTATTGTGGGATTATTAA

Protein sequence

MSSDSNAVPKKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSPNNIPTTTTTTDDASDASDELTEIVQLPSLGTTYDGDCGDSFVFLDYSTEDSAAWLYPPPWLPSLEDYDEIQNDGKMGMGMGFISTNFKGLLWDY
Homology
[Close]
BLAST of Carg03844 vs. NCBI nr
Match: XP_022951619.1 (dehydration-responsive element-binding protein 3-like [Cucurbita moschata])

HSP 1 Score: 388.7 bits (997), Expect = 1.3e-104
Identity = 212/214 (99.07%), Postives = 212/214 (99.07%), Query Frame = 0 

Query: 1   MSSDSNAVPKKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 60
           MSSDSNAVPKKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT
Sbjct: 1   MSSDSNAVPKKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 60

Query: 61  FPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSP 120
           FPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSP
Sbjct: 61  FPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSP 120

Query: 121 NNIPTXXXXXXXXXXXXXXXXXXXXXXXXGTTYDGDCGDSFVFLDYSTEDSAAWLYPPPW 180
           NNIPT XXXXXXXXXXXXXXXXXXXXXX GTTYDGDCGDSFVFLDYSTEDSAAWLYPPPW
Sbjct: 121 NNIPTTXXXXXXXXXXXXXXXXXXXXXXLGTTYDGDCGDSFVFLDYSTEDSAAWLYPPPW 180

Query: 181 LPSLEDYDEIQNDGKMGMGMGFISTNFKGLLWDY 215
           LPSLEDYDEIQNDGKMGMGMGFISTNFKGLLWDY
Sbjct: 181 LPSLEDYDEIQNDGKMGMGMGFISTNFKGLLWDY 214

[Close]
BLAST of Carg03844 vs. NCBI nr
Match: XP_023536694.1 (dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386.7 bits (992), Expect = 5.0e-104
Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0 

Query: 1   MSSDSNAVPKKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 60
           MSSDSNAVPKKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT
Sbjct: 1   MSSDSNAVPKKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 60

Query: 61  FPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSP 120
           FPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSP
Sbjct: 61  FPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSP 120

Query: 121 NNIPTXXXXXXXXXXXXXXXXXXXXXXXXGTTYDGDCGDSFVFLDYSTEDSAAWLYPPPW 180
           NNIPTXXXXXXXXXXXXXXXXXXXXXXXXGT YDGDCGDSFVFLDYSTEDSAAWLYPPPW
Sbjct: 121 NNIPTXXXXXXXXXXXXXXXXXXXXXXXXGTAYDGDCGDSFVFLDYSTEDSAAWLYPPPW 180

Query: 181 LPSLEDYDEIQNDGKMGMGMGFISTNFKGLLWDY 215
           LPSLEDYDEIQNDGKMGMGMGFISTNFKGLLWDY
Sbjct: 181 LPSLEDYDEIQNDGKMGMGMGFISTNFKGLLWDY 214

[Close]
BLAST of Carg03844 vs. NCBI nr
Match: XP_023002497.1 (dehydration-responsive element-binding protein 3-like [Cucurbita maxima])

HSP 1 Score: 367.9 bits (943), Expect = 2.4e-98
Identity = 207/214 (96.73%), Postives = 208/214 (97.20%), Query Frame = 0 

Query: 1   MSSDSNAVPKKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 60
           MSSDSNAVPKKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT
Sbjct: 1   MSSDSNAVPKKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 60

Query: 61  FPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSP 120
           FPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRD+QAAA QAAHMHNLSP
Sbjct: 61  FPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAAAAQAAHMHNLSP 120

Query: 121 NNIPTXXXXXXXXXXXXXXXXXXXXXXXXGTTYDGDCGDSFVFLDYSTEDSAAWLYPPPW 180
           NNIPT XXXXXXXXXXXXXXXXXXXXXXX  TYDGDCGDSFVFLDYSTEDSAAWLYPPPW
Sbjct: 121 NNIPT-XXXXXXXXXXXXXXXXXXXXXXXXXTYDGDCGDSFVFLDYSTEDSAAWLYPPPW 180

Query: 181 LPSLEDYDEIQNDGKMGMGMGFISTNFKGLLWDY 215
           LPSLEDYDEIQNDGK  MGMGFISTNFKGLLWDY
Sbjct: 181 LPSLEDYDEIQNDGK--MGMGFISTNFKGLLWDY 211

[Close]
BLAST of Carg03844 vs. NCBI nr
Match: XP_022996592.1 (dehydration-responsive element-binding protein 3-like isoform X4 [Cucurbita maxima] >XP_022996593.1 dehydration-responsive element-binding protein 3-like isoform X5 [Cucurbita maxima])

HSP 1 Score: 222.6 bits (566), Expect = 1.3e-54
Identity = 135/206 (65.53%), Postives = 149/206 (72.33%), Query Frame = 0 

Query: 10  KKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAAR 69
           KK+KRIR      D+  SKHP+YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAAR
Sbjct: 17  KKLKRIR------DTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAAR 76

Query: 70  AHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSPNNIPTXXXX 129
           AHDVAALSIKG +AILNFPDLVHLLPRPVSLAPRD+QAAAT+AAHM+         XXXX
Sbjct: 77  AHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAATKAAHMNXXXXXXXXXXXXX 136

Query: 130 XXXXXXXXXXXXXXXXXXXXGTTYDGDCGDSFVFLDYSTE-DSAAWLYPPPWLPSLEDYD 189
           XXXXXXXXXXX         GT++DG  G   VF D   E +S  W+Y PPW+ SLED D
Sbjct: 137 XXXXXXXXXXXTEIVQLPSLGTSFDGGGGGELVFFDSGQELESGCWMYTPPWVQSLEDCD 196

Query: 190 EIQNDGKMGMGMGFISTNFKGLLWDY 215
              + GK           F+GLLWDY
Sbjct: 197 N-DDYGK-----------FEGLLWDY 204

[Close]
BLAST of Carg03844 vs. NCBI nr
Match: XP_022996594.1 (dehydration-responsive element-binding protein 3-like isoform X6 [Cucurbita maxima])

HSP 1 Score: 220.3 bits (560), Expect = 6.2e-54
Identity = 136/206 (66.02%), Postives = 149/206 (72.33%), Query Frame = 0 

Query: 10  KKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAAR 69
           KK+KRIR      D+  SKHP+YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAAR
Sbjct: 17  KKLKRIR------DTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAAR 76

Query: 70  AHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSPNNIPTXXXX 129
           AHDVAALSIKG +AILNFPDLVHLLPRPVSLAPRD+QAAAT+AAHM N        XXXX
Sbjct: 77  AHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAATKAAHM-NXXXXXXXXXXXX 136

Query: 130 XXXXXXXXXXXXXXXXXXXXGTTYDGDCGDSFVFLDYSTE-DSAAWLYPPPWLPSLEDYD 189
           XXXXXXXXXXX         GT++DG  G   VF D   E +S  W+Y PPW+ SLED D
Sbjct: 137 XXXXXXXXXXXTEIVQLPSLGTSFDGGGGGELVFFDSGQELESGCWMYTPPWVQSLEDCD 196

Query: 190 EIQNDGKMGMGMGFISTNFKGLLWDY 215
              + GK           F+GLLWDY
Sbjct: 197 N-DDYGK-----------FEGLLWDY 203

[Close]
BLAST of Carg03844 vs. TAIR10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 166.0 bits (419), Expect = 2.5e-41
Identity = 104/203 (51.23%), Postives = 122/203 (60.10%), Query Frame = 0 

Query: 2   SSDSNAVPKKIKRIRN-PESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 61
           +S+S++V  K K  ++  ++    +S KHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT
Sbjct: 20  NSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 79

Query: 62  FPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLS- 121
           FP+PEMAARAHDVAALSIKG +AILNFP+L    PRPVSL+PRDIQ AA +AAHM   + 
Sbjct: 80  FPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTS 139

Query: 122 -------------PNNIPTXXXXXXXXXXXXXXXXXXXXXXXXGTTYDGD---CGDSFVF 181
                              XXX                     G +YD D    G+ FVF
Sbjct: 140 FXXXXXXXXXXXXXXXXXXXXXVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEFVF 199

Query: 182 LDYSTEDSAAWLYPPPWLPSLED 187
             Y + D    LYPPPW  S ED
Sbjct: 200 --YDSVDYC--LYPPPWGQSSED 218

[Close]
BLAST of Carg03844 vs. TAIR10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 161.8 bits (408), Expect = 4.8e-40
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0 

Query: 25  NSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAI 84
           +S KHPVYRGVR RNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKG SAI
Sbjct: 29  DSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAI 88

Query: 85  LNFPDLVHLLPRPVSLAPRDIQAAATQAAHM 116
           LNFPDL    PRP SL+PRDIQ AA +AAHM
Sbjct: 89  LNFPDLAGSFPRPSSLSPRDIQVAALKAAHM 119

[Close]
BLAST of Carg03844 vs. TAIR10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 76/100 (76.00%), Postives = 88/100 (88.00%), Query Frame = 0 

Query: 19  ESNSD---SNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAA 78
           +S+SD     ++K PVYRGVRMR+WGKWVSEIREPRKKSRIWLGTFP+ EMA RAHDVAA
Sbjct: 3   DSSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAA 62

Query: 79  LSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHM 116
           +SIKG SAILNFP+L  LLPRPVSL+PRD++AAAT+AA M
Sbjct: 63  MSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM 102

[Close]
BLAST of Carg03844 vs. TAIR10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 145.2 bits (365), Expect = 4.6e-35
Identity = 70/85 (82.35%), Postives = 77/85 (90.59%), Query Frame = 0 

Query: 31  VYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDL 90
           VYRG RMR+WGKWVSEIREPRKKSRIWLGTFP+ EMAARAHDVAALSIKG+SAILNFP+L
Sbjct: 25  VYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPEL 84

Query: 91  VHLLPRPVSLAPRDIQAAATQAAHM 116
              LPRPVSL+ +DIQAAA +AA M
Sbjct: 85  ADFLPRPVSLSQQDIQAAAAEAALM 109

[Close]
BLAST of Carg03844 vs. TAIR10
Match: AT3G60490.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 144.8 bits (364), Expect = 6.0e-35
Identity = 70/88 (79.55%), Postives = 80/88 (90.91%), Query Frame = 0 

Query: 27  SKHPV-YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAIL 86
           +K+P  YRGVRMR+WGKWVSEIREPRKKSRIWLGT+P+ EMAARAHDVAAL+IKGNS  L
Sbjct: 65  NKNPTSYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFL 124

Query: 87  NFPDLVHLLPRPVSLAPRDIQAAATQAA 114
           NFP+L  LLPRPVS +P+DIQAAAT+AA
Sbjct: 125 NFPELSGLLPRPVSCSPKDIQAAATKAA 152

[Close]
BLAST of Carg03844 vs. Swiss-Prot
Match: sp|Q9LYD3|DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.6e-40
Identity = 104/203 (51.23%), Postives = 122/203 (60.10%), Query Frame = 0 

Query: 2   SSDSNAVPKKIKRIRN-PESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 61
           +S+S++V  K K  ++  ++    +S KHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT
Sbjct: 20  NSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 79

Query: 62  FPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLS- 121
           FP+PEMAARAHDVAALSIKG +AILNFP+L    PRPVSL+PRDIQ AA +AAHM   + 
Sbjct: 80  FPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTS 139

Query: 122 -------------PNNIPTXXXXXXXXXXXXXXXXXXXXXXXXGTTYDGD---CGDSFVF 181
                              XXX                     G +YD D    G+ FVF
Sbjct: 140 FXXXXXXXXXXXXXXXXXXXXXVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEFVF 199

Query: 182 LDYSTEDSAAWLYPPPWLPSLED 187
             Y + D    LYPPPW  S ED
Sbjct: 200 --YDSVDYC--LYPPPWGQSSED 218

[Close]
BLAST of Carg03844 vs. Swiss-Prot
Match: sp|Q39127|TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.6e-39
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0 

Query: 25  NSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAI 84
           +S KHPVYRGVR RNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKG SAI
Sbjct: 29  DSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAI 88

Query: 85  LNFPDLVHLLPRPVSLAPRDIQAAATQAAHM 116
           LNFPDL    PRP SL+PRDIQ AA +AAHM
Sbjct: 89  LNFPDLAGSFPRPSSLSPRDIQVAALKAAHM 119

[Close]
BLAST of Carg03844 vs. Swiss-Prot
Match: sp|Q9M080|ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-36
Identity = 76/100 (76.00%), Postives = 88/100 (88.00%), Query Frame = 0 

Query: 19  ESNSD---SNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAA 78
           +S+SD     ++K PVYRGVRMR+WGKWVSEIREPRKKSRIWLGTFP+ EMA RAHDVAA
Sbjct: 3   DSSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAA 62

Query: 79  LSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHM 116
           +SIKG SAILNFP+L  LLPRPVSL+PRD++AAAT+AA M
Sbjct: 63  MSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM 102

[Close]
BLAST of Carg03844 vs. Swiss-Prot
Match: sp|Q52QU1|ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.3e-34
Identity = 70/85 (82.35%), Postives = 77/85 (90.59%), Query Frame = 0 

Query: 31  VYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDL 90
           VYRG RMR+WGKWVSEIREPRKKSRIWLGTFP+ EMAARAHDVAALSIKG+SAILNFP+L
Sbjct: 25  VYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPEL 84

Query: 91  VHLLPRPVSLAPRDIQAAATQAAHM 116
              LPRPVSL+ +DIQAAA +AA M
Sbjct: 85  ADFLPRPVSLSQQDIQAAAAEAALM 109

[Close]
BLAST of Carg03844 vs. Swiss-Prot
Match: sp|Q9M210|ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 GN=ERF035 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-33
Identity = 70/88 (79.55%), Postives = 80/88 (90.91%), Query Frame = 0 

Query: 27  SKHPV-YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAIL 86
           +K+P  YRGVRMR+WGKWVSEIREPRKKSRIWLGT+P+ EMAARAHDVAAL+IKGNS  L
Sbjct: 65  NKNPTSYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFL 124

Query: 87  NFPDLVHLLPRPVSLAPRDIQAAATQAA 114
           NFP+L  LLPRPVS +P+DIQAAAT+AA
Sbjct: 125 NFPELSGLLPRPVSCSPKDIQAAATKAA 152

[Close]
BLAST of Carg03844 vs. TrEMBL
Match: tr|Q75UJ6|Q75UJ6_CUCME (DREB-like protein OS=Cucumis melo OX=3656 GN=CMe-DREB1 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.7e-52
Identity = 127/191 (66.49%), Postives = 137/191 (71.73%), Query Frame = 0 

Query: 29  HPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFP 88
           H VYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFP
Sbjct: 40  HAVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFP 99

Query: 89  DLVHLLPRPVSLAPRDIQA-AATQAAHMHNLSPNNIPTXXXXXXXXXXXXXXXXXXXXXX 148
           DLVHLLPRPVSLAPRD+QA                   XXXXXXXXXX            
Sbjct: 100 DLVHLLPRPVSLAPRDVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSDELSEIVELP 159

Query: 149 XXGTTYDG--DCGDSFVFLDYSTEDSAAWLYPPPWLPSL-EDYDEIQNDGKMG-MGMGFI 208
             GT+YDG    G  FVF++ S  +SAAWLY PPW+ SL EDYD+I  DG  G +GMGF+
Sbjct: 160 ALGTSYDGGVGVGGEFVFVE-SELESAAWLYQPPWVQSLQEDYDDIDGDGDCGKLGMGFV 219

Query: 209 STNFKGLLWDY 215
           S  FKG L+DY
Sbjct: 220 SNGFKGFLFDY 229

[Close]
BLAST of Carg03844 vs. TrEMBL
Match: tr|A0A0A0LPS6|A0A0A0LPS6_CUCSA (DREB-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G374590 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.1e-49
Identity = 123/189 (65.08%), Postives = 133/189 (70.37%), Query Frame = 0 

Query: 31  VYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDL 90
           VYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDL
Sbjct: 44  VYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDL 103

Query: 91  VHLLPRPVSLAPRDIQA-AATQAAHMHNLSPNNIPTXXXXXXXXXXXXXXXXXXXXXXXX 150
           VHLLPRPVSLAPRD+QA                   XXXXXXXXXX              
Sbjct: 104 VHLLPRPVSLAPRDVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSDELSEIVELPAL 163

Query: 151 GTTYDG--DCGDSFVFLDYSTEDSAAWLYPPPWLPSL-EDYDEIQNDGKMG-MGMGFIST 210
           GT+YD     G  FVF++ S  +SAAWLYPPPW+ SL EDYD+       G +GMGF+S 
Sbjct: 164 GTSYDEGVGVGGEFVFVE-SELESAAWLYPPPWVQSLEEDYDDXXXXXXCGKLGMGFVSN 223

Query: 211 NFKGLLWDY 215
            FKG L+DY
Sbjct: 224 GFKGFLFDY 231

[Close]
BLAST of Carg03844 vs. TrEMBL
Match: tr|A0A2P5FA36|A0A2P5FA36_9ROSA (AP2/ERF domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_096800 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.8e-48
Identity = 114/233 (48.93%), Postives = 139/233 (59.66%), Query Frame = 0 

Query: 1   MSSDSNAVPKKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 60
           +S+ +    K +KRIR        +SSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT
Sbjct: 52  VSAAAGESKKSVKRIR--------DSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 111

Query: 61  FPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNL-S 120
           FP+PEMAARAHDVAALSIKGNSAILNFP L   LPRP SL+PRD+QAAA +AA MH+L +
Sbjct: 112 FPTPEMAARAHDVAALSIKGNSAILNFPQLADSLPRPASLSPRDVQAAAAKAAQMHDLHA 171

Query: 121 PNN--------------IPTXXXXXXXXXXXXXXXXXXXXXXXXGTTYD-GDCGDSFVFL 180
           P++                                         GT+YD  +  +  VF+
Sbjct: 172 PSSQSXXXXXXXXXXXXXXXVSGMEISAEYQSEELSEIVELPRLGTSYDSAELANELVFV 231

Query: 181 DYSTEDSAAWLYPPPWLPSLEDYDEIQNDGKMGMGMGFIST---NFKGLLWDY 215
           D        W+YPPPWL  ++ +  +Q D     G G  +T   +F+GLLWDY
Sbjct: 232 D----SEEGWVYPPPWLQGVDSFGYLQRDSYELCGGGSAATVPESFQGLLWDY 272

[Close]
BLAST of Carg03844 vs. TrEMBL
Match: tr|W6FFW1|W6FFW1_9ROSA (Dehydration responsive element binding transcription factor OS=Morus notabilis OX=981085 GN=DREB4D PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.4e-46
Identity = 121/208 (58.17%), Postives = 138/208 (66.35%), Query Frame = 0 

Query: 24  SNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSA 83
           S+SSKHPVYRGVRMRNWGKWVSEIREP+KKSRIWLGTFP+PEMAARAHDVAALSIKG+SA
Sbjct: 59  SDSSKHPVYRGVRMRNWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAALSIKGSSA 118

Query: 84  ILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNLSPNN---------------IPTXXX 143
           ILNFP L   LPRP SLAPRD+QAAA +AA MH L  +                   XXX
Sbjct: 119 ILNFPHLAGSLPRPASLAPRDVQAAAAKAAQMHKLDGSQXXXXXXXXXXXXXXXXXXXXX 178

Query: 144 XXXXXXXXXXXXXXXXXXXXXGTTYD-GDCGDSFVFLDYSTEDSAAWLYPPPWLPSLEDY 203
           XXXXXXXX             GT+Y+  + G  FVF+D  +ED   W+YPPPWL S+ D+
Sbjct: 179 XXXXXXXXSEELSEIVELPSLGTSYESAELGTEFVFVD--SED--GWVYPPPWLQSVRDH 238

Query: 204 DEIQNDGKMGMGMGFISTNFKGLLW-DY 215
           +              IST F+GLLW DY
Sbjct: 239 E-------------LISTGFEGLLWSDY 249

[Close]
BLAST of Carg03844 vs. TrEMBL
Match: tr|A0A061GK29|A0A061GK29_THECC (Integrase-type DNA-binding superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_037194 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.2e-45
Identity = 134/226 (59.29%), Postives = 155/226 (68.58%), Query Frame = 0 

Query: 4   DSNAVPKKIKRIRNPESNSDSNSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPS 63
           DSN   KKIKR+R        +SSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFP+
Sbjct: 53  DSN---KKIKRMR--------DSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPT 112

Query: 64  PEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDIQAAATQAAHMHNL-SPNN 123
           PEMAARAHDVAALSIKGNSAILNFP+L + LPRPVSLAPRD+QAAA +AA M    SP+ 
Sbjct: 113 PEMAARAHDVAALSIKGNSAILNFPELANSLPRPVSLAPRDVQAAAAKAAQMDKFDSPSP 172

Query: 124 IPTXXXXXXXXXXXXXXXXXXXXXXXXG------------TTYDG-DCGDSFVFLDYSTE 183
             T XXXXXXXXXXXXXXXXXX                  T+YD  +  + FVF+D    
Sbjct: 173 FTTSXXXXXXXXXXXXXXXXXXLSSGSDELSQIVELPSLETSYDSVELKNEFVFVD---- 232

Query: 184 DSAAWLYPPPWLPSLEDYDEIQNDGKMGMGMGFISTNF-KGLLWDY 215
               W Y PPWL S++D   + +  ++G+    +   F +GLLWDY
Sbjct: 233 SVDGWFYTPPWLQSVDDCGYVCD--QLGVPESVLQNGFDEGLLWDY 261

The following BLAST results are available for this feature:
BLAST of Carg03844 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951619.11.3e-10499.07dehydration-responsive element-binding protein 3-like [Cucurbita moschata][more]
XP_023536694.15.0e-10499.53dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pep... [more]
XP_023002497.12.4e-9896.73dehydration-responsive element-binding protein 3-like [Cucurbita maxima][more]
XP_022996592.11.3e-5465.53dehydration-responsive element-binding protein 3-like isoform X4 [Cucurbita maxi... [more]
XP_022996594.16.2e-5466.02dehydration-responsive element-binding protein 3-like isoform X6 [Cucurbita maxi... [more]
BLAST of Carg03844 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G11590.12.5e-4151.23Integrase-type DNA-binding superfamily protein[more]
AT5G25810.14.8e-4085.71Integrase-type DNA-binding superfamily protein[more]
AT4G32800.11.3e-3776.00Integrase-type DNA-binding superfamily protein[more]
AT2G25820.14.6e-3582.35Integrase-type DNA-binding superfamily protein[more]
AT3G60490.16.0e-3579.55Integrase-type DNA-binding superfamily protein[more]
BLAST of Carg03844 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LYD3|DREB3_ARATH4.6e-4051.23Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702... [more]
sp|Q39127|TINY_ARATH8.6e-3985.71Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9M080|ERF43_ARATH2.3e-3676.00Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q52QU1|ERF42_ARATH8.3e-3482.35Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9M210|ERF35_ARATH1.1e-3379.55Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Carg03844 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|Q75UJ6|Q75UJ6_CUCME1.7e-5266.49DREB-like protein OS=Cucumis melo OX=3656 GN=CMe-DREB1 PE=2 SV=1[more]
tr|A0A0A0LPS6|A0A0A0LPS6_CUCSA3.1e-4965.08DREB-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G374590 PE=4 SV=1[more]
tr|A0A2P5FA36|A0A2P5FA36_9ROSA5.8e-4848.93AP2/ERF domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_096... [more]
tr|W6FFW1|W6FFW1_9ROSA5.4e-4658.17Dehydration responsive element binding transcription factor OS=Morus notabilis O... [more]
tr|A0A061GK29|A0A061GK29_THECC1.2e-4559.29Integrase-type DNA-binding superfamily protein OS=Theobroma cacao OX=3641 GN=TCM... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03844-RACarg03844-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 54..70
score: 61.71
coord: 32..43
score: 71.21
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 31..94
e-value: 9.2E-34
score: 128.2
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 30..80
e-value: 1.3E-12
score: 47.7
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 31..88
score: 23.209
IPR001471AP2/ERF domainCDDcd00018AP2coord: 32..90
e-value: 5.01214E-32
score: 111.595
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 31..90
e-value: 1.6E-28
score: 100.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..137
NoneNo IPR availablePANTHERPTHR31985:SF73SUBFAMILY NOT NAMEDcoord: 5..187
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 5..187
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 31..89