Cucsa.161310 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.161310
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Dehydration responsive element binding transcription factor
Location	scaffold01144 : 1224101 .. 1224796 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAGTAGTAAAGAACAGAGCCCTTCTTCAGAAACAGAGTCTTCTTCTTCTTCTTCTTCAGATTCAAACAAAAAACCCAAGCGAATCAATTCCAATTCCAATTCCAATTCCAATTCCAAACTCGCAGTTTACAGAGGAGTTCGAATGAGAAATTGGGGGAAATGGGTATCGGAAATTCGAGAACCAAGAAAGAAATCCCGCATTTGGTTAGGTACTTTCCCCAGTCCTGAAATGGCTGCTCGAGCTCATGATGTTGCTGCTCTAAGCATCAAAGGAAATTCCGCCATTCTTAATTTCCCTGATCTTGTTCATCTTCTTCCTCGTCCTGTTTCTCTTGCGCCTCGTGATGTTCAAGCTGCTGCTGCTAAAGCTGCCCACATGCATAATCTTTCATCTAATGCTAATACTAACAACCACAATACTAATTCTAATTCCTCCTCTGCCTTTTCCGATGAACTTAGTGAGATTGTTGAGTTGCCGGCTCTGGGAACGAGTTACGACGAGGGTGTTGGTGTTGGTGGGGAGTTTGTGTTTGTTGAGTCGGAATTGGAATCGGCGGCTTGGCTTTACCCGCCGCCGTGGGTGCAGAGCTTAGAGGAGGATTATGATGATGGAGATGGAGATGGAGATTGTGGTAAGTTGGGAATGGGATTTGTTTCCAATGGATTTAAAGGGTTTTTGTTTGATTATTGA

mRNA sequence

ATGAGTAGTAGTAAAGAACAGAGCCCTTCTTCAGAAACAGAGtcttcttcttcttcttcttcAGATTCAAACAAAAAACCCAAGCGAATCAATTCCAATTCCAATTCCAATTCCAATTCCAAACTCGCAGTTTACAGAGGAGTTCGAATGAGAAATTGGGGGAAATGGGTATCGGAAATTCGAGAACCAAGAAAGAAATCCCGCATTTGGTTAGGTACTTTCCCCAGTCCTGAAATGGCTGCTCGAGCTCATGATGTTGCTGCTCTAAGCATCAAAGGAAATTCCGCCATTCTTAATTTCCCTGATCTTGTTCATCTTCTTCCTCGTCCTGTTTCTCTTGCGCCTCGTGATGTTCAAGCTGCTGCTGCTAAAGCTGCCCACATGCATAATCTTTCATCTAATGCTAATACTAACAACCACAATACTAATTCTAATTCCTCCTCTGCCTTTTCCGATGAACTTAGTGAGATTGTTGAGTTGCCGGCTCTGGGAACGAGTTACGACGAGGGTGTTGGTGTTGGTGGGGAGTTTGTGTTTGTTGAGTCGGAATTGGAATCGGCGGCTTGGCTTTACCCGCCGCCGTGGGTGCAGAGCTTAGAGGAGGATTATGATGATGGAGATGGAGATGGAGATTGTGGTAAGTTGGGAATGGGATTTGTTTCCAATGGATTTAAAGGGTTTTTGTTTGATTATTGA

Coding sequence (CDS)

ATGAGTAGTAGTAAAGAACAGAGCCCTTCTTCAGAAACAGAGTCTTCTTCTTCTTCTTCTTCAGATTCAAACAAAAAACCCAAGCGAATCAATTCCAATTCCAATTCCAATTCCAATTCCAAACTCGCAGTTTACAGAGGAGTTCGAATGAGAAATTGGGGGAAATGGGTATCGGAAATTCGAGAACCAAGAAAGAAATCCCGCATTTGGTTAGGTACTTTCCCCAGTCCTGAAATGGCTGCTCGAGCTCATGATGTTGCTGCTCTAAGCATCAAAGGAAATTCCGCCATTCTTAATTTCCCTGATCTTGTTCATCTTCTTCCTCGTCCTGTTTCTCTTGCGCCTCGTGATGTTCAAGCTGCTGCTGCTAAAGCTGCCCACATGCATAATCTTTCATCTAATGCTAATACTAACAACCACAATACTAATTCTAATTCCTCCTCTGCCTTTTCCGATGAACTTAGTGAGATTGTTGAGTTGCCGGCTCTGGGAACGAGTTACGACGAGGGTGTTGGTGTTGGTGGGGAGTTTGTGTTTGTTGAGTCGGAATTGGAATCGGCGGCTTGGCTTTACCCGCCGCCGTGGGTGCAGAGCTTAGAGGAGGATTATGATGATGGAGATGGAGATGGAGATTGTGGTAAGTTGGGAATGGGATTTGTTTCCAATGGATTTAAAGGGTTTTTGTTTGATTATTGA

Protein sequence

MSSSKEQSPSSETESSSSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAAAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYDEGVGVGGEFVFVESELESAAWLYPPPWVQSLEEDYDDGDGDGDCGKLGMGFVSNGFKGFLFDY*

Homology

[Close]

BLAST of Cucsa.161310 vs. Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 9.1e-55
Identity = 119/214 (55.61%), Postives = 147/214 (68.69%), Query Frame = 1


Query: 9   PSSETESSS--SSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEIREPRKK 68
           P+SE++S S  S +  S KK KR         + K  VYRGVRMRNWGKWVSEIREPRKK
Sbjct: 19  PNSESDSVSDKSKAEQSEKKTKR------GRDSGKHPVYRGVRMRNWGKWVSEIREPRKK 78

Query: 69  SRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAAAAKAA 128
           SRIWLGTFP+PEMAARAHDVAALSIKG +AILNFP+L    PRPVSL+PRD+Q AA KAA
Sbjct: 79  SRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAA 138

Query: 129 HMHNLSSNANTNNHNTNSNSSSAF-------------SDELSEIVELPALGTSYD-EGVG 188
           HM   +S +++ + +++ +S+S+              S+EL EIVELP+LG SYD +   
Sbjct: 139 HMEPTTSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSAN 198

Query: 189 VGGEFVFVESELESAAWLYPPPWVQSLEEDYDDG 207
           +G EFVF +S       LYPPPW QS E++Y  G
Sbjct: 199 LGNEFVFYDS---VDYCLYPPPWGQSSEDNYGHG 223

[Close]

BLAST of Cucsa.161310 vs. Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.1e-51
Identity = 113/220 (51.36%), Postives = 140/220 (63.64%), Query Frame = 1


Query: 4   SKEQSPSSETESSSSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEIREP 63
           + E + S E  +    + +  KKP +         + K  VYRGVR RNWGKWVSEIREP
Sbjct: 3   ASESTKSWEASAVRQENEEEKKKPVK--------DSGKHPVYRGVRKRNWGKWVSEIREP 62

Query: 64  RKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAAAA 123
           RKKSRIWLGTFPSPEMAARAHDVAALSIKG SAILNFPDL    PRP SL+PRD+Q AA 
Sbjct: 63  RKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAAL 122

Query: 124 KAAHMH-----------NLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYDEGVG 183
           KAAHM              SS+ ++++  +  +SS+  S+EL EIVELP+LG+SYD    
Sbjct: 123 KAAHMETSQSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQ 182

Query: 184 VGGEFVFVESELESAAWLYPPPWVQ--------SLEEDYD 205
           +G EF+F +S   +  W YPP W +        SL +D+D
Sbjct: 183 LGNEFIFSDS---ADLWPYPPQWSEGDYQMIPASLSQDWD 211

[Close]

BLAST of Cucsa.161310 vs. Swiss-Prot
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF043 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.6e-44
Identity = 112/222 (50.45%), Postives = 137/222 (61.71%), Query Frame = 1


Query: 17  SSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPS 76
           + SSSD  KK            N+K  VYRGVRMR+WGKWVSEIREPRKKSRIWLGTFP+
Sbjct: 2   ADSSSDKEKK-----------ENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPT 61

Query: 77  PEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAAAAKAAHM-------- 136
            EMA RAHDVAA+SIKG SAILNFP+L  LLPRPVSL+PRDV+AAA KAA M        
Sbjct: 62  AEMAMRAHDVAAMSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFR 121

Query: 137 -----------HNLSSNANTNNHNTNSNSS---------SAFSDELSEIVELPALGTSYD 196
                      + +S ++ +N   + S+SS         S  SD+L EIV+LP+LGTS +
Sbjct: 122 SDTETSETTTSNKMSESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLN 181

Query: 197 EGVGVGGEFVFVESELESAAWLYPPPWVQSLEED---YDDGD 208
           E      EFV  +S LE    +Y P W+   EE+   Y++ D
Sbjct: 182 E----SNEFVIFDS-LEDL--VYMPRWLSGTEEEVFTYNNND 205

[Close]

BLAST of Cucsa.161310 vs. Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.3e-42
Identity = 108/223 (48.43%), Postives = 136/223 (60.99%), Query Frame = 1


Query: 3   SSKEQSPSSETESSSSSSSDSNKK--PKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEI 62
           S K+ SP  E E       DS++    KR+ S+           YRGVRMR WGKWVSEI
Sbjct: 8   SVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPG---------YRGVRMRTWGKWVSEI 67

Query: 63  REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA 122
           REPRKKSRIWLGTF +PEMAARAHD AAL+IKG SA+LNFP+L   LPRP S +PRDVQA
Sbjct: 68  REPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQA 127

Query: 123 AAAKAAHMHNLSSNA------------------NTNNHNTNSNSS--------SAFSDEL 182
           AAA AA M    S++                  ++++++T ++SS        ++ ++EL
Sbjct: 128 AAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEEL 187

Query: 183 SEIVELPALGTSYDEGVGVGGEFVFVESELESAAWLYPP--PW 196
           SEIVELP+L TSYDE +    EFV+V+S        YPP  PW
Sbjct: 188 SEIVELPSLETSYDESL---SEFVYVDS-------AYPPSSPW 211

[Close]

BLAST of Cucsa.161310 vs. Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.6e-41
Identity = 100/216 (46.30%), Postives = 128/216 (59.26%), Query Frame = 1


Query: 22  DSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAA 81
           DS+      +S        +  VYRG RMR+WGKWVSEIREPRKKSRIWLGTFP+ EMAA
Sbjct: 3   DSHGSDTECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAA 62

Query: 82  RAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAAAAKAAHM------------- 141
           RAHDVAALSIKG+SAILNFP+L   LPRPVSL+ +D+QAAAA+AA M             
Sbjct: 63  RAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDS 122

Query: 142 ---------------HNLSSNANTNNHNTNSNSSSAFSDELSEIVELPAL--GTSYDEGV 201
                           + SS+A++++ +++S+SSS  S EL +IVELP+L     YD   
Sbjct: 123 TPLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVELPSLENNVKYD--- 182

Query: 202 GVGGEFVFVESELESAAWLYPPPWVQSLEEDYDDGD 208
                   +   LE    +  PPW+ + E D+  GD
Sbjct: 183 ------CALYDSLEGLVSM--PPWLDATENDFRYGD 207

[Close]

BLAST of Cucsa.161310 vs. TrEMBL
Match: A0A0A0LPS6_CUCSA (DREB-like protein OS=Cucumis sativus GN=Csa_2G374590 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 6.7e-129
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1


Query: 1   MSSSKEQSPSSETESSSSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEI 60
           MSSSKEQSPSSETESSSSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEI
Sbjct: 1   MSSSKEQSPSSETESSSSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEI 60

Query: 61  REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA 120
           REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA
Sbjct: 61  REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA 120

Query: 121 AAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYDEGVGVGGEFVFV 180
           AAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYDEGVGVGGEFVFV
Sbjct: 121 AAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYDEGVGVGGEFVFV 180

Query: 181 ESELESAAWLYPPPWVQSLEEDYDDGDGDGDCGKLGMGFVSNGFKGFLFDY 232
           ESELESAAWLYPPPWVQSLEEDYDDGDGDGDCGKLGMGFVSNGFKGFLFDY
Sbjct: 181 ESELESAAWLYPPPWVQSLEEDYDDGDGDGDCGKLGMGFVSNGFKGFLFDY 231

[Close]

BLAST of Cucsa.161310 vs. TrEMBL
Match: Q75UJ6_CUCME (DREB-like protein OS=Cucumis melo GN=CMe-DREB1 PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 5.1e-121
Identity = 222/231 (96.10%), Postives = 224/231 (96.97%), Query Frame = 1


Query: 1   MSSSKEQSPSSETESSSSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEI 60
           MSSSKEQSPS ETESSSSSSSDSNKKPKRINSNS+SNS  K AVYRGVRMRNWGKWVSEI
Sbjct: 1   MSSSKEQSPSPETESSSSSSSDSNKKPKRINSNSSSNS--KHAVYRGVRMRNWGKWVSEI 60

Query: 61  REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA 120
           REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA
Sbjct: 61  REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA 120

Query: 121 AAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYDEGVGVGGEFVFV 180
           AAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYD GVGVGGEFVFV
Sbjct: 121 AAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYDGGVGVGGEFVFV 180

Query: 181 ESELESAAWLYPPPWVQSLEEDYDDGDGDGDCGKLGMGFVSNGFKGFLFDY 232
           ESELESAAWLY PPWVQSL+EDYDD DGDGDCGKLGMGFVSNGFKGFLFDY
Sbjct: 181 ESELESAAWLYQPPWVQSLQEDYDDIDGDGDCGKLGMGFVSNGFKGFLFDY 229

[Close]

BLAST of Cucsa.161310 vs. TrEMBL
Match: D5L133_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D49 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.1e-58
Identity = 143/264 (54.17%), Postives = 173/264 (65.53%), Query Frame = 1


Query: 4   SKEQSPSSETESSSSSSSDS----------NKKPKRINSNSNSNSN-------------S 63
           S +Q  SSETES+S+SS+ +          N+ P++ +S  +  ++             S
Sbjct: 2   SADQPQSSETESNSNSSTSASPPSSPSSLQNQNPQKPSSPIHQETDLPTKNNAKRVRDSS 61

Query: 64  KLAVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNF 123
           K  VYRGVRMRNWGKWVSEIREPRKKSRIWLGTFP+PEMAARAHDVAALSIKGNSAILNF
Sbjct: 62  KHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNF 121

Query: 124 PDLVHLLPRPVSLAPRDVQAAAAKAAHMHNLSSNANTNNHNTNSNSSSAF---------- 183
           P+L + LPRPVSLAPRDVQAAA KAA MH   S  + +    +S+SSS+           
Sbjct: 122 PELSNSLPRPVSLAPRDVQAAATKAAQMHQFDSIRSMSPSILSSSSSSSLSSLVSAIDNL 181

Query: 184 ---SDELSEIVELPALGTSYDEGVGVGGEFVFVESELESAAWLYPPPWVQSLEEDYDDGD 232
              SDELSEIVELP+L  SY E   +  EFVFVESE +   W+YPPPW+Q +EE      
Sbjct: 182 STESDELSEIVELPSL--SY-ESTELRSEFVFVESEDQ---WVYPPPWLQRVEE------ 241

[Close]

BLAST of Cucsa.161310 vs. TrEMBL
Match: A0A067KPE2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07721 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.4e-57
Identity = 130/227 (57.27%), Postives = 153/227 (67.40%), Query Frame = 1


Query: 2   SSSKEQSPSSETESSSSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEIR 61
           SSS    P+S + S +  + D+    K+I    +SN   K  VYRGVRMRNWGKWVSEIR
Sbjct: 12  SSSSSSPPASPSSSKTQQTLDAESPTKKIKRIRDSN---KHPVYRGVRMRNWGKWVSEIR 71

Query: 62  EPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAA 121
           EPRKKSRIWLGTFP+PEMAARAHDVAALSIKGNSAILNFP+L + LPRP SLAPRDVQAA
Sbjct: 72  EPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELANSLPRPASLAPRDVQAA 131

Query: 122 AAKAAHMHNLSSNA-------NTNNHNTNSNSSSAFS---------------DELSEIVE 181
           AAKAA M      A        T++ + + +S+SA S               +ELSEIVE
Sbjct: 132 AAKAAQMDQFDQKAFDSATTTTTSSSSPSMSSASASSLSSLVSAMDLSTGSEEELSEIVE 191

Query: 182 LPALGTSYDEGVGVGGEFVFVESELESAAWLYPPPWVQSLEEDYDDG 207
           LP+LGTSY E   +  +FVFV+S      W+YPPPWVQSLE+ Y DG
Sbjct: 192 LPSLGTSY-EWTELSSDFVFVDS---VDGWVYPPPWVQSLEDSYGDG 231

[Close]

BLAST of Cucsa.161310 vs. TrEMBL
Match: W6FFW1_9ROSA (Dehydration responsive element binding transcription factor OS=Morus notabilis GN=DREB4D PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.4e-57
Identity = 138/268 (51.49%), Postives = 166/268 (61.94%), Query Frame = 1


Query: 1   MSSSKEQSPSSETESSSSSSSDSNKKPKRI-------------NSNSNSNS--------- 60
           MS++ E + SS   S+S+S+S S + P  +             +  +N NS         
Sbjct: 1   MSTTSETTESSSNSSTSTSTSSSPQSPSSVCPTPPPPPPPPPPSDEANKNSKICKRMRSD 60

Query: 61  NSKLAVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAIL 120
           +SK  VYRGVRMRNWGKWVSEIREP+KKSRIWLGTFP+PEMAARAHDVAALSIKG+SAIL
Sbjct: 61  SSKHPVYRGVRMRNWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAALSIKGSSAIL 120

Query: 121 NFPDLVHLLPRPVSLAPRDVQAAAAKAAHMHNLSSNANTNNHNTNSNSSSA--------- 180
           NFP L   LPRP SLAPRDVQAAAAKAA MH L  +       T ++SSSA         
Sbjct: 121 NFPHLAGSLPRPASLAPRDVQAAAAKAAQMHKLDGSQTAATAVTTTSSSSALLSASSSAT 180

Query: 181 -----FSDELSEIVELPALGTSYDEGVGVGGEFVFVESELESAAWLYPPPWVQSLEEDYD 232
                 S+ELSEIVELP+LGTSY E   +G EFVFV+SE     W+YPPPW+QS+ +   
Sbjct: 181 TTSFVLSEELSEIVELPSLGTSY-ESAELGTEFVFVDSE---DGWVYPPPWLQSVRDH-- 240

[Close]

BLAST of Cucsa.161310 vs. TAIR10
Match: AT5G11590.1 (AT5G11590.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 214.9 bits (546), Expect = 5.1e-56
Identity = 119/214 (55.61%), Postives = 147/214 (68.69%), Query Frame = 1


Query: 9   PSSETESSS--SSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEIREPRKK 68
           P+SE++S S  S +  S KK KR         + K  VYRGVRMRNWGKWVSEIREPRKK
Sbjct: 19  PNSESDSVSDKSKAEQSEKKTKR------GRDSGKHPVYRGVRMRNWGKWVSEIREPRKK 78

Query: 69  SRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAAAAKAA 128
           SRIWLGTFP+PEMAARAHDVAALSIKG +AILNFP+L    PRPVSL+PRD+Q AA KAA
Sbjct: 79  SRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAA 138

Query: 129 HMHNLSSNANTNNHNTNSNSSSAF-------------SDELSEIVELPALGTSYD-EGVG 188
           HM   +S +++ + +++ +S+S+              S+EL EIVELP+LG SYD +   
Sbjct: 139 HMEPTTSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSAN 198

Query: 189 VGGEFVFVESELESAAWLYPPPWVQSLEEDYDDG 207
           +G EFVF +S       LYPPPW QS E++Y  G
Sbjct: 199 LGNEFVFYDS---VDYCLYPPPWGQSSEDNYGHG 223

[Close]

BLAST of Cucsa.161310 vs. TAIR10
Match: AT5G25810.1 (AT5G25810.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 202.2 bits (513), Expect = 3.5e-52
Identity = 113/220 (51.36%), Postives = 140/220 (63.64%), Query Frame = 1


Query: 4   SKEQSPSSETESSSSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEIREP 63
           + E + S E  +    + +  KKP +         + K  VYRGVR RNWGKWVSEIREP
Sbjct: 3   ASESTKSWEASAVRQENEEEKKKPVK--------DSGKHPVYRGVRKRNWGKWVSEIREP 62

Query: 64  RKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAAAA 123
           RKKSRIWLGTFPSPEMAARAHDVAALSIKG SAILNFPDL    PRP SL+PRD+Q AA 
Sbjct: 63  RKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAAL 122

Query: 124 KAAHMH-----------NLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYDEGVG 183
           KAAHM              SS+ ++++  +  +SS+  S+EL EIVELP+LG+SYD    
Sbjct: 123 KAAHMETSQSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQ 182

Query: 184 VGGEFVFVESELESAAWLYPPPWVQ--------SLEEDYD 205
           +G EF+F +S   +  W YPP W +        SL +D+D
Sbjct: 183 LGNEFIFSDS---ADLWPYPPQWSEGDYQMIPASLSQDWD 211

[Close]

BLAST of Cucsa.161310 vs. TAIR10
Match: AT4G32800.1 (AT4G32800.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 179.1 bits (453), Expect = 3.1e-45
Identity = 112/222 (50.45%), Postives = 137/222 (61.71%), Query Frame = 1


Query: 17  SSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPS 76
           + SSSD  KK            N+K  VYRGVRMR+WGKWVSEIREPRKKSRIWLGTFP+
Sbjct: 2   ADSSSDKEKK-----------ENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPT 61

Query: 77  PEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAAAAKAAHM-------- 136
            EMA RAHDVAA+SIKG SAILNFP+L  LLPRPVSL+PRDV+AAA KAA M        
Sbjct: 62  AEMAMRAHDVAAMSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFR 121

Query: 137 -----------HNLSSNANTNNHNTNSNSS---------SAFSDELSEIVELPALGTSYD 196
                      + +S ++ +N   + S+SS         S  SD+L EIV+LP+LGTS +
Sbjct: 122 SDTETSETTTSNKMSESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLN 181

Query: 197 EGVGVGGEFVFVESELESAAWLYPPPWVQSLEED---YDDGD 208
           E      EFV  +S LE    +Y P W+   EE+   Y++ D
Sbjct: 182 E----SNEFVIFDS-LEDL--VYMPRWLSGTEEEVFTYNNND 205

[Close]

BLAST of Cucsa.161310 vs. TAIR10
Match: AT1G77200.1 (AT1G77200.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 173.7 bits (439), Expect = 1.3e-43
Identity = 108/223 (48.43%), Postives = 136/223 (60.99%), Query Frame = 1


Query: 3   SSKEQSPSSETESSSSSSSDSNKK--PKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEI 62
           S K+ SP  E E       DS++    KR+ S+           YRGVRMR WGKWVSEI
Sbjct: 8   SVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPG---------YRGVRMRTWGKWVSEI 67

Query: 63  REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA 122
           REPRKKSRIWLGTF +PEMAARAHD AAL+IKG SA+LNFP+L   LPRP S +PRDVQA
Sbjct: 68  REPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQA 127

Query: 123 AAAKAAHMHNLSSNA------------------NTNNHNTNSNSS--------SAFSDEL 182
           AAA AA M    S++                  ++++++T ++SS        ++ ++EL
Sbjct: 128 AAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEEL 187

Query: 183 SEIVELPALGTSYDEGVGVGGEFVFVESELESAAWLYPP--PW 196
           SEIVELP+L TSYDE +    EFV+V+S        YPP  PW
Sbjct: 188 SEIVELPSLETSYDESL---SEFVYVDS-------AYPPSSPW 211

[Close]

BLAST of Cucsa.161310 vs. TAIR10
Match: AT2G25820.1 (AT2G25820.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-42
Identity = 100/216 (46.30%), Postives = 128/216 (59.26%), Query Frame = 1


Query: 22  DSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAA 81
           DS+      +S        +  VYRG RMR+WGKWVSEIREPRKKSRIWLGTFP+ EMAA
Sbjct: 3   DSHGSDTECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAA 62

Query: 82  RAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAAAAKAAHM------------- 141
           RAHDVAALSIKG+SAILNFP+L   LPRPVSL+ +D+QAAAA+AA M             
Sbjct: 63  RAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDS 122

Query: 142 ---------------HNLSSNANTNNHNTNSNSSSAFSDELSEIVELPAL--GTSYDEGV 201
                           + SS+A++++ +++S+SSS  S EL +IVELP+L     YD   
Sbjct: 123 TPLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVELPSLENNVKYD--- 182

Query: 202 GVGGEFVFVESELESAAWLYPPPWVQSLEEDYDDGD 208
                   +   LE    +  PPW+ + E D+  GD
Sbjct: 183 ------CALYDSLEGLVSM--PPWLDATENDFRYGD 207

[Close]

BLAST of Cucsa.161310 vs. NCBI nr
Match: gi|778672054|ref|XP_004150289.2| (PREDICTED: ethylene-responsive transcription factor TINY-like [Cucumis sativus])

HSP 1 Score: 468.0 bits (1203), Expect = 9.6e-129
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1


Query: 1   MSSSKEQSPSSETESSSSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEI 60
           MSSSKEQSPSSETESSSSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEI
Sbjct: 1   MSSSKEQSPSSETESSSSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEI 60

Query: 61  REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA 120
           REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA
Sbjct: 61  REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA 120

Query: 121 AAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYDEGVGVGGEFVFV 180
           AAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYDEGVGVGGEFVFV
Sbjct: 121 AAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYDEGVGVGGEFVFV 180

Query: 181 ESELESAAWLYPPPWVQSLEEDYDDGDGDGDCGKLGMGFVSNGFKGFLFDY 232
           ESELESAAWLYPPPWVQSLEEDYDDGDGDGDCGKLGMGFVSNGFKGFLFDY
Sbjct: 181 ESELESAAWLYPPPWVQSLEEDYDDGDGDGDCGKLGMGFVSNGFKGFLFDY 231

[Close]

BLAST of Cucsa.161310 vs. NCBI nr
Match: gi|985482321|ref|NP_001306241.1| (ethylene-responsive transcription factor TINY-like [Cucumis melo])

HSP 1 Score: 441.8 bits (1135), Expect = 7.3e-121
Identity = 222/231 (96.10%), Postives = 224/231 (96.97%), Query Frame = 1


Query: 1   MSSSKEQSPSSETESSSSSSSDSNKKPKRINSNSNSNSNSKLAVYRGVRMRNWGKWVSEI 60
           MSSSKEQSPS ETESSSSSSSDSNKKPKRINSNS+SNS  K AVYRGVRMRNWGKWVSEI
Sbjct: 1   MSSSKEQSPSPETESSSSSSSDSNKKPKRINSNSSSNS--KHAVYRGVRMRNWGKWVSEI 60

Query: 61  REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA 120
           REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA
Sbjct: 61  REPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQA 120

Query: 121 AAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYDEGVGVGGEFVFV 180
           AAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYD GVGVGGEFVFV
Sbjct: 121 AAAKAAHMHNLSSNANTNNHNTNSNSSSAFSDELSEIVELPALGTSYDGGVGVGGEFVFV 180

Query: 181 ESELESAAWLYPPPWVQSLEEDYDDGDGDGDCGKLGMGFVSNGFKGFLFDY 232
           ESELESAAWLY PPWVQSL+EDYDD DGDGDCGKLGMGFVSNGFKGFLFDY
Sbjct: 181 ESELESAAWLYQPPWVQSLQEDYDDIDGDGDCGKLGMGFVSNGFKGFLFDY 229

[Close]

BLAST of Cucsa.161310 vs. NCBI nr
Match: gi|470109809|ref|XP_004291182.1| (PREDICTED: dehydration-responsive element-binding protein 3-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 241.5 bits (615), Expect = 1.5e-60
Identity = 141/250 (56.40%), Postives = 166/250 (66.40%), Query Frame = 1


Query: 2   SSSKEQSPSSETESSSSSSSDSNKKPKRINSNSNSNSNSKLA--------VYRGVRMRNW 61
           SSS   SP S   SS   + D+  +   +   +N++  SK A        VYRGVRMRNW
Sbjct: 15  SSSTSSSPPSSPASSRPLNPDNKPESLELQPKNNNDKKSKRARVDSSKHPVYRGVRMRNW 74

Query: 62  GKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSL 121
           GKWVSEIREPRKKSRIWLGTFP+PEMAARAHDVAALSIKGNSAILNFP+L+  LPRP SL
Sbjct: 75  GKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELIDSLPRPASL 134

Query: 122 APRDVQAAAAKAAHMHNLSSNANTNNHNTNSNSS-----------SAFSDELSEIVELPA 181
           APRDVQAAA+KAA MH   S  N +  +T+S+SS           S  S+ELSEIVELP+
Sbjct: 135 APRDVQAAASKAAQMHQFDS-TNPSLSSTSSSSSLSSLVSAIDNLSTESEELSEIVELPS 194

Query: 182 LGTSYDEGVGVGGEFVFVESELESAAWLYPPPWVQSLEEDYDDGD-GDGDCGKLGMGFVS 232
           LGTSY E   +  EFVFV+S  +   W+YPPPW+Q +      GD G   CG LG    S
Sbjct: 195 LGTSY-ESYELRSEFVFVDSADDE--WVYPPPWLQQM------GDCGVYVCGGLGSSANS 254

[Close]

BLAST of Cucsa.161310 vs. NCBI nr
Match: gi|1009135794|ref|XP_015885179.1| (PREDICTED: dehydration-responsive element-binding protein 3-like [Ziziphus jujuba])

HSP 1 Score: 234.2 bits (596), Expect = 2.3e-58
Identity = 132/230 (57.39%), Postives = 155/230 (67.39%), Query Frame = 1


Query: 7   QSPSSETESSSSSSSDSNKKPKRINSNSNSN-------------------------SNSK 66
           ++ SSETESSSS+SS S+  P   ++ S S                           +SK
Sbjct: 4   EAQSSETESSSSNSSSSSSPPSPSSAGSGSTHSLSNIKSQQSSHDEEPNKKIKRIRDSSK 63

Query: 67  LAVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFP 126
             VYRGVRMRNWGKWVSEIREPRKKSRIWLGTFP+PEMAARAHDVAALSIKGNSAILNFP
Sbjct: 64  HPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFP 123

Query: 127 DLVHLLPRPVSLAPRDVQAAAAKAAHMHNLSSNANTNNHNTNSNSSS-----------AF 186
            LV LLPRPVSL+PRD+QAAA KAA MH   S  + ++   +S+SSS             
Sbjct: 124 HLVDLLPRPVSLSPRDIQAAATKAAQMHKFDSPPSLSSSTLSSSSSSLSSLVSAIDLGTE 183

Query: 187 SDELSEIVELPALGTSYDEGVGVGGEFVFVESELESAAWLYPPPWVQSLE 201
           SDELSEIV+LP+LGTSY E   +  EFVFV+SE     W+YPPPW+Q++E
Sbjct: 184 SDELSEIVKLPSLGTSY-ESSELSNEFVFVDSE---DGWVYPPPWMQNVE 229

[Close]

BLAST of Cucsa.161310 vs. NCBI nr
Match: gi|806638515|ref|NP_001292812.1| (ethylene-responsive transcription factor TINY-like [Malus domestica])

HSP 1 Score: 233.8 bits (595), Expect = 3.0e-58
Identity = 143/264 (54.17%), Postives = 173/264 (65.53%), Query Frame = 1


Query: 4   SKEQSPSSETESSSSSSSDS----------NKKPKRINSNSNSNSN-------------S 63
           S +Q  SSETES+S+SS+ +          N+ P++ +S  +  ++             S
Sbjct: 2   SADQPQSSETESNSNSSTSASPPSSPSSLQNQNPQKPSSPIHQETDLPTKNNAKRVRDSS 61

Query: 64  KLAVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNF 123
           K  VYRGVRMRNWGKWVSEIREPRKKSRIWLGTFP+PEMAARAHDVAALSIKGNSAILNF
Sbjct: 62  KHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNF 121

Query: 124 PDLVHLLPRPVSLAPRDVQAAAAKAAHMHNLSSNANTNNHNTNSNSSSAF---------- 183
           P+L + LPRPVSLAPRDVQAAA KAA MH   S  + +    +S+SSS+           
Sbjct: 122 PELSNSLPRPVSLAPRDVQAAATKAAQMHQFDSIRSMSPSILSSSSSSSLSSLVSAIDNL 181

Query: 184 ---SDELSEIVELPALGTSYDEGVGVGGEFVFVESELESAAWLYPPPWVQSLEEDYDDGD 232
              SDELSEIVELP+L  SY E   +  EFVFVESE +   W+YPPPW+Q +EE      
Sbjct: 182 STESDELSEIVELPSL--SY-ESTELRSEFVFVESEDQ---WVYPPPWLQRVEE------ 241

The following BLAST results are available for this feature:

BLAST of Cucsa.161310 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DREB3_ARATH	9.1e-55	55.61	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB...	[more]
TINY_ARATH	6.1e-51	51.36	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE...	[more]
ERF43_ARATH	5.6e-44	50.45	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF04...	[more]
ERF37_ARATH	2.3e-42	48.43	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF03...	[more]
ERF42_ARATH	2.6e-41	46.30	Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF04...	[more]

BLAST of Cucsa.161310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPS6_CUCSA	6.7e-129	100.00	DREB-like protein OS=Cucumis sativus GN=Csa_2G374590 PE=4 SV=1	[more]
Q75UJ6_CUCME	5.1e-121	96.10	DREB-like protein OS=Cucumis melo GN=CMe-DREB1 PE=2 SV=1	[more]
D5L133_MALDO	2.1e-58	54.17	AP2 domain class transcription factor OS=Malus domestica GN=AP2D49 PE=2 SV=1	[more]
A0A067KPE2_JATCU	1.4e-57	57.27	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07721 PE=4 SV=1	[more]
W6FFW1_9ROSA	1.4e-57	51.49	Dehydration responsive element binding transcription factor OS=Morus notabilis G...	[more]

BLAST of Cucsa.161310 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11590.1	5.1e-56	55.61	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	3.5e-52	51.36	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	3.1e-45	50.45	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	1.3e-43	48.43	Integrase-type DNA-binding superfamily protein	[more]
AT2G25820.1	1.5e-42	46.30	Integrase-type DNA-binding superfamily protein	[more]

BLAST of Cucsa.161310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778672054\|ref\|XP_004150289.2\|	9.6e-129	100.00	PREDICTED: ethylene-responsive transcription factor TINY-like [Cucumis sativus]	[more]
gi\|985482321\|ref\|NP_001306241.1\|	7.3e-121	96.10	ethylene-responsive transcription factor TINY-like [Cucumis melo]	[more]
gi\|470109809\|ref\|XP_004291182.1\|	1.5e-60	56.40	PREDICTED: dehydration-responsive element-binding protein 3-like [Fragaria vesca...	[more]
gi\|1009135794\|ref\|XP_015885179.1\|	2.3e-58	57.39	PREDICTED: dehydration-responsive element-binding protein 3-like [Ziziphus jujub...	[more]
gi\|806638515\|ref\|NP_001292812.1\|	3.0e-58	54.17	ethylene-responsive transcription factor TINY-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.161310.1	Cucsa.161310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 67..83 score: 8.8E-10coord: 45..56 score: 8.8
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 44..102 score: 3.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 44..93 score: 2.8
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 44..107 score: 9.2
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 44..101 score: 23
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 44..102 score: 1.9
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 1..212 score: 3.1
None	No IPR available	PANTHER	PTHR31985:SF5	SUBFAMILY NOT NAMED	coord: 1..212 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.161310	Cla022212	Watermelon (97103) v1	cgywmB289
Cucsa.161310	Cla023112	Watermelon (97103) v1	cgywmB298
Cucsa.161310	Csa2G374590	Cucumber (Chinese Long) v2	cgycuB233
Cucsa.161310	MELO3C011143	Melon (DHL92) v3.5.1	cgymeB276
Cucsa.161310	MELO3C003463	Melon (DHL92) v3.5.1	cgymeB282
Cucsa.161310	ClCG08G012250	Watermelon (Charleston Gray)	cgywcgB282
Cucsa.161310	CSPI02G22270	Wild cucumber (PI 183967)	cgycpiB239
Cucsa.161310	CmaCh12G002530	Cucurbita maxima (Rimu)	cgycmaB0447
Cucsa.161310	CmaCh05G005940	Cucurbita maxima (Rimu)	cgycmaB0460
Cucsa.161310	CmoCh05G006190	Cucurbita moschata (Rifu)	cgycmoB0461
Cucsa.161310	CmoCh12G002060	Cucurbita moschata (Rifu)	cgycmoB0448
Cucsa.161310	Lsi04G023310	Bottle gourd (USVL1VR-Ls)	cgylsiB263
Cucsa.161310	Lsi08G010860	Bottle gourd (USVL1VR-Ls)	cgylsiB267
Cucsa.161310	MELO3C011143.2	Melon (DHL92) v3.6.1	cgymedB273
Cucsa.161310	CsaV3_3G048560	Cucumber (Chinese Long) v3	cgycucB251
Cucsa.161310	CsaV3_2G030880	Cucumber (Chinese Long) v3	cgycucB247
Cucsa.161310	Cla97C11G221160	Watermelon (97103) v2	cgywmbB274
Cucsa.161310	Cla97C08G155430	Watermelon (97103) v2	cgywmbB282
Cucsa.161310	Bhi04G000696	Wax gourd	cgywgoB317
Cucsa.161310	Carg03844	Silver-seed gourd	carcgyB1091
Cucsa.161310	Carg08281	Silver-seed gourd	carcgyB0066

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cucsa.161310	Cucsa.312570	Cucumber (Gy14) v1	cgycgyB101

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.161310	Cucurbita pepo (Zucchini)	cgycpeB0428
Cucsa.161310	Cucurbita pepo (Zucchini)	cgycpeB0444