Carg03616 (gene) Silver-seed gourd

Overview
NameCarg03616
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCSL zinc finger protein
LocationCucurbita_argyrosperma_scaffold_006 : 1015115 .. 1017268 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTGTTAACCCGACGAGGGAATCTCTTTCTGCTTCCCAATGAAGTTTGACTCCGACGATCCCCGTTGAAAGCTTCTGTGGCGGTTTTTCTTTGGCAGAAATTTCCATTTCCAAGCTTTAGTTTCCAATTCGACCATGGCGATTTCCGATCTATCACCGTTGTCCTTCGTGCTGCTTCTGTTGGTGACGGCGGTGGTTGTCGAAGCTAGGGACAACAACCGAGTTTTCTCACCTTGTATTGACACGACTGTTGAGAAGTCCGACGGGTTCACCTTAGGGCTTGCTTTTGCGACGGAGCAGAAGTTCGTCTTCAATAAAACATTGAAGTTGTCTCCTTGTGACAGCAGGCTCGCTCTTACGAATGGAAATGCTCTGATCTCTGTGTTTAGACCTAAGGTTGATGAGATCTCCCTCCTCACCGTCAACACTACTCCGTCTGTGTCCTCCTTCAATCCGGTTAGTTTTTCGAACTCTATGTTCTTTGTTGATGTCGAATCTATGGATTTTCTGTTTTCTCTTCGTTTGAGATTGAAAGTAGTTCTAATTAGGTTTTGTGCGTGAATTTGTCTAATTATCGGTAGTTTTTGTGGGATTGGAGTAATAGGTTTGTAAGAGGGAGGCATACAGAACAGATCCTTATGGAATCACTTTGCTTACTTAGAATGCGTGATGCTAGCCGATTTGATATGGGATTTTTTGGTTTGTTAATTGTTCTTTTGAGGGAAATCAGTAATCAATCATTTGATTGACATTCTGCACGATCCAATTTGAACAAGAAACTCAAATGTTGATCTCTATATGGAAAAAGGAAGAACTTCACTGAAGATGGTATCAAGATGTTTTACTCTTTGGTTGATGTTTGACAGAGTAGATATTCCCCTTCCCTCTTCCGCTTTAAGATGATATCATACTTATTAATCTTTGCTAGCTCGATTTTAATTGCTCACATAAATCTAACATTTTACTTCAATATTCTAGTTGTCCGTTCACTCCAGTCGTGGACTCATGATTTTGTTTTCTTTTCATTCAGTCTTCACATGGCTATATGGTTGCATTTGCTGGTCGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTCTCAGATGGACAACATATCGTAACCAGCTTTACTCTGGTAAGTTTATGACATAGAAAGTAGGAAGTAAACTAAAGGCACAAGACATGGACACAATACTACACTGACTTGGTGATATATTTATAAGAATTCAATGGACATATGTAACAAATTACCTTTGCTGTGAAATGTAAGAGATAGCAATTGAAAAACTATGGAATAAGGTCGTCATAATATGACAATCTTCAATATTTTGTAGTTTTTTTTATGTGAATGGGTAGGCTTTGTTGAGGATTGTTGGGAGGGAGTCCAATATTGGGTAATTAAGAGGATGATCATGCGTTAATAAGTAAGGAACACTATCTCCATTGGTATGAGACCTTTTGGGGAAACCAAAAGCAAAGCCATGAAAGTTTATGCTGAAAGTAGACAATATCATACTATTGTGGAGAGTCGTGGTTCCTAACCGACTTCATTTATATAGCAAGTCATGTGAGTTTTAATCTTTGAGTAGTGTCTGTGCATACTAACTTATGACAGTCCATTGGGTAACAAATCCATCAATTTTTCTCGGTGTATAGGTGCTCGAGTTTGAGAAAGGCAGGCTGCAAAACTTGTTCTGGAAAAGAGATGGTTGTGCTCGATGTTCAAACAACCATACCTTTGTTTGCATCAACAATCAGGATTGTGCAATCAGAACAAACAACTGCAAAAATAGTGGTCCTGTCGATTGCAGCCTTGCGATACAGTTAGCGTTCTCTGGCACAGATAAGCACCTTTCTGTCTTCAACTCTTGGTATGAAGTGTCGAGACTTCGGCAATACTCACTCGTCGATCTATATTCGAACCTCAAAGATTCTCTCACAAGTCAGTATAACAAGATCTTCCAATAAAGCATATTTTTGTTAATGTATATTTCATTTCCATCCTTGTAACTTGGTTTGTGCTACGAATTCCTTTCAAATCTTGTGCATTTTTCGTCAATTAAATGTGTGACAATAGGGGCGGTACTAGTGTTGTATGTATCACGAACTCCTGGTTAAATGTAATACAAAATCATAGCGTTGAATTGCTTCTCT

mRNA sequence

TATTGTTAACCCGACGAGGGAATCTCTTTCTGCTTCCCAATGAAGTTTGACTCCGACGATCCCCGTTGAAAGCTTCTGTGGCGGTTTTTCTTTGGCAGAAATTTCCATTTCCAAGCTTTAGTTTCCAATTCGACCATGGCGATTTCCGATCTATCACCGTTGTCCTTCGTGCTGCTTCTGTTGGTGACGGCGGTGGTTGTCGAAGCTAGGGACAACAACCGAGTTTTCTCACCTTGTATTGACACGACTGTTGAGAAGTCCGACGGGTTCACCTTAGGGCTTGCTTTTGCGACGGAGCAGAAGTTCGTCTTCAATAAAACATTGAAGTTGTCTCCTTGTGACAGCAGGCTCGCTCTTACGAATGGAAATGCTCTGATCTCTGTGTTTAGACCTAAGGTTGATGAGATCTCCCTCCTCACCGTCAACACTACTCCGTCTGTGTCCTCCTTCAATCCGTCTTCACATGGCTATATGGTTGCATTTGCTGGTCGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTCTCAGATGGACAACATATCGTAACCAGCTTTACTCTGGTGCTCGAGTTTGAGAAAGGCAGGCTGCAAAACTTGTTCTGGAAAAGAGATGGTTGTGCTCGATGTTCAAACAACCATACCTTTGTTTGCATCAACAATCAGGATTGTGCAATCAGAACAAACAACTGCAAAAATAGTGGTCCTGTCGATTGCAGCCTTGCGATACAGTTAGCGTTCTCTGGCACAGATAAGCACCTTTCTGTCTTCAACTCTTGGTATGAAGTGTCGAGACTTCGGCAATACTCACTCGTCGATCTATATTCGAACCTCAAAGATTCTCTCACAAGTCAGTATAACAAGATCTTCCAATAAAGCATATTTTTGTTAATGTATATTTCATTTCCATCCTTGTAACTTGGTTTGTGCTACGAATTCCTTTCAAATCTTGTGCATTTTTCGTCAATTAAATGTGTGACAATAGGGGCGGTACTAGTGTTGTATGTATCACGAACTCCTGGTTAAATGTAATACAAAATCATAGCGTTGAATTGCTTCTCT

Coding sequence (CDS)

ATGGCGATTTCCGATCTATCACCGTTGTCCTTCGTGCTGCTTCTGTTGGTGACGGCGGTGGTTGTCGAAGCTAGGGACAACAACCGAGTTTTCTCACCTTGTATTGACACGACTGTTGAGAAGTCCGACGGGTTCACCTTAGGGCTTGCTTTTGCGACGGAGCAGAAGTTCGTCTTCAATAAAACATTGAAGTTGTCTCCTTGTGACAGCAGGCTCGCTCTTACGAATGGAAATGCTCTGATCTCTGTGTTTAGACCTAAGGTTGATGAGATCTCCCTCCTCACCGTCAACACTACTCCGTCTGTGTCCTCCTTCAATCCGTCTTCACATGGCTATATGGTTGCATTTGCTGGTCGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTCTCAGATGGACAACATATCGTAACCAGCTTTACTCTGGTGCTCGAGTTTGAGAAAGGCAGGCTGCAAAACTTGTTCTGGAAAAGAGATGGTTGTGCTCGATGTTCAAACAACCATACCTTTGTTTGCATCAACAATCAGGATTGTGCAATCAGAACAAACAACTGCAAAAATAGTGGTCCTGTCGATTGCAGCCTTGCGATACAGTTAGCGTTCTCTGGCACAGATAAGCACCTTTCTGTCTTCAACTCTTGGTATGAAGTGTCGAGACTTCGGCAATACTCACTCGTCGATCTATATTCGAACCTCAAAGATTCTCTCACAAGTCAGTATAACAAGATCTTCCAATAA

Protein sequence

MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFNKTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRKYAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAIRTNNCKNSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQYNKIFQ
Homology
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BLAST of Carg03616 vs. NCBI nr
Match: XP_022935582.1 (uncharacterized protein LOC111442414 [Cucurbita moschata])

HSP 1 Score: 491.1 bits (1263), Expect = 2.2e-135
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0 

Query: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60
           MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN
Sbjct: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60

Query: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRK 120
           KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRK
Sbjct: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRK 120

Query: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180
           YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI
Sbjct: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180

Query: 181 RTNNCKNSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQY 240
           RTNNCKNSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQY
Sbjct: 181 RTNNCKNSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQY 240

Query: 241 NKIFQ 246
           NKIFQ
Sbjct: 241 NKIFQ 245

[Close]
BLAST of Carg03616 vs. NCBI nr
Match: XP_022983083.1 (uncharacterized protein LOC111481736 [Cucurbita maxima])

HSP 1 Score: 486.1 bits (1250), Expect = 7.0e-134
Identity = 242/245 (98.78%), Postives = 245/245 (100.00%), Query Frame = 0 

Query: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60
           MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN
Sbjct: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60

Query: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRK 120
           KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVS+FNPSS+GYMVAFAGRK
Sbjct: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSTFNPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180
           YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI
Sbjct: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180

Query: 181 RTNNCKNSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQY 240
           RTNNCKNSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVS+LRQYSLVDLYSNLKDSLTSQY
Sbjct: 181 RTNNCKNSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSKLRQYSLVDLYSNLKDSLTSQY 240

Query: 241 NKIFQ 246
           NKIFQ
Sbjct: 241 NKIFQ 245

[Close]
BLAST of Carg03616 vs. NCBI nr
Match: XP_023528901.1 (uncharacterized protein LOC111791684 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 485.7 bits (1249), Expect = 9.1e-134
Identity = 242/245 (98.78%), Postives = 244/245 (99.59%), Query Frame = 0 

Query: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60
           MAISDLSPLSFVLLLLVT VVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN
Sbjct: 1   MAISDLSPLSFVLLLLVTVVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60

Query: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRK 120
           KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSS+GYMVAFAGRK
Sbjct: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180
           YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI
Sbjct: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180

Query: 181 RTNNCKNSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQY 240
           RTNNCKNSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVS+LRQYSLVDLYSNLKDSLTSQY
Sbjct: 181 RTNNCKNSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSKLRQYSLVDLYSNLKDSLTSQY 240

Query: 241 NKIFQ 246
           NKIFQ
Sbjct: 241 NKIFQ 245

[Close]
BLAST of Carg03616 vs. NCBI nr
Match: XP_023538924.1 (uncharacterized protein LOC111799707 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.3 bits (1118), Expect = 1.4e-118
Identity = 219/246 (89.02%), Postives = 230/246 (93.50%), Query Frame = 0 

Query: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60
           MAI DLS  S VLLLL+TA  VEARD+NRVFSPC DTTVEKSDGFTLGLAFAT QKFVFN
Sbjct: 1   MAIYDLSRASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATHQKFVFN 60

Query: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRK 120
           KTL LSPCDSRLALTNGN+LISVFRP VDEISLLTVNTTPSVS+FNPSS+GYMVAFAGRK
Sbjct: 61  KTLNLSPCDSRLALTNGNSLISVFRPMVDEISLLTVNTTPSVSNFNPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180
           YAARSPPIFV+D QH VTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCINNQDCAI
Sbjct: 121 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180

Query: 181 RTNNCK-NSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQ 240
           RT+NCK   GPVDCSLAIQLAFSGTDKHLSVFNSWYEVS+LRQYSL +LYSNLKDSLTSQ
Sbjct: 181 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSKLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIFQ 246
           YNKIFQ
Sbjct: 241 YNKIFQ 246

[Close]
BLAST of Carg03616 vs. NCBI nr
Match: XP_022939140.1 (uncharacterized protein LOC111445105 [Cucurbita moschata])

HSP 1 Score: 434.1 bits (1115), Expect = 3.1e-118
Identity = 218/246 (88.62%), Postives = 230/246 (93.50%), Query Frame = 0 

Query: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60
           MAI DLS  S VLLLL+TA  VEARD+NRVFSPC DTTVEKSDGFTLGLAFAT+QKFVFN
Sbjct: 1   MAIYDLSTASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFN 60

Query: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRK 120
           KTL LSPCDSRLALTNGN+LIS+FRP VDEISLLTVNTTPSVS+FNPSS+ YMVAFAGRK
Sbjct: 61  KTLNLSPCDSRLALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSSNSYMVAFAGRK 120

Query: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180
           YAARSPPIFV+D QH VTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCINNQDCAI
Sbjct: 121 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180

Query: 181 RTNNCK-NSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQ 240
           RT+NCK   GPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSL +LYSNLKDSLTSQ
Sbjct: 181 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIFQ 246
           YNKIFQ
Sbjct: 241 YNKIFQ 246

[Close]
BLAST of Carg03616 vs. TAIR10
Match: AT3G11800.1 (unknown protein)

HSP 1 Score: 293.9 bits (751), Expect = 9.2e-80
Identity = 145/234 (61.97%), Postives = 182/234 (77.78%), Query Frame = 0 

Query: 16  LVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVF---NKTLKLSPCDSRL 75
           ++T+ + EA DNN+V+SPC D+TV   DGFT G+AFA +  F     +K+++ SPCD R 
Sbjct: 14  VLTSSLTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRH 73

Query: 76  ALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNP-SSHGYMVAFAGRKYAARSPPIFVS 135
              NGN+ ++VFRPKVDEI+LLT+NT+ S SSF P +S GYMVAFAG KYAARS PI V+
Sbjct: 74  LSLNGNSEVAVFRPKVDEITLLTINTSSS-SSFRPDASKGYMVAFAGAKYAARSLPIMVA 133

Query: 136 DGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAIRTNNCKN-SGP 195
           D  HIVTSFTLVLEF+KGRL+N+FWK+DGC++CS +  FVC+N ++CAI+  NCKN  G 
Sbjct: 134 DSNHIVTSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQ 193

Query: 196 VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQYNKIF 245
           VDCSL IQLAFSGTDKH +  NSWYEV+ L+QYSL  LYSNLKDSLT+ +  IF
Sbjct: 194 VDCSLGIQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPFKNIF 246

[Close]
BLAST of Carg03616 vs. TAIR10
Match: AT3G44150.1 (unknown protein)

HSP 1 Score: 292.4 bits (747), Expect = 2.7e-79
Identity = 141/221 (63.80%), Postives = 172/221 (77.83%), Query Frame = 0 

Query: 26  DNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFNKTLKLSPCDSRLALTNGNALISVFR 85
           + N ++SPC DT +++SDGFT G+AF++   F  N+T+ LSPCD RL+L   N+  SVFR
Sbjct: 30  NTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPCDRRLSLAAMNSQFSVFR 89

Query: 86  PKVDEISLLTVNTTPSVSSFNPSSH-GYMVAFAGRKYAARSPPIFVSDGQHIVTSFTLVL 145
           PK+DEISLL++NT    S+F P ++ GYMVAFAGRKYAARS P F+++   IVTSFTLV+
Sbjct: 90  PKIDEISLLSINT----SAFFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVM 149

Query: 146 EFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAIRTNNCK-NSGPVDCSLAIQLAFSG 205
           EF+KGRLQNL+WKRDGCA C  N  FVC+N QDCAIRT +CK   G VDCSL IQLAFSG
Sbjct: 150 EFQKGRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSCKGRGGAVDCSLGIQLAFSG 209

Query: 206 TDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQYNKIF 245
           TDKHL+V NSWYEV  L+QYSL  LYSNLK SLT+Q+N  F
Sbjct: 210 TDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFNNFF 246

[Close]
BLAST of Carg03616 vs. TAIR10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein)

HSP 1 Score: 232.3 bits (591), Expect = 3.3e-61
Identity = 121/229 (52.84%), Postives = 162/229 (70.74%), Query Frame = 0 

Query: 22  VEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFNKTLKLSPCDSRLALTNGNALI 81
           V A DNN V+SPC DT + K DGFT+G+A ++++ F F   ++LSPCD+RL L    A +
Sbjct: 140 VGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAF-FLDQVQLSPCDTRLGLAAKMAQL 199

Query: 82  SVFRPKVDEISLLTVNTTPSVSSFNPS-SHGYMVAFAGRKYAARSPPIFVSDGQHIVTSF 141
           ++FRPKVDEISLL+++T    S FNPS + G+MV FAG KYAARS P+ V+DG + +T+F
Sbjct: 200 ALFRPKVDEISLLSIDT----SKFNPSEAGGFMVGFAGSKYAARSYPVKVADGSNTITAF 259

Query: 142 T---------LVLEFEKGRLQNLFWKRDGCARC--SNNHTFVCINNQDCAIRTNNCK-NS 201
           T         LVLEF+KG LQNLFWK  GC  C  + + + VC+N  DCA+ T+ CK N 
Sbjct: 260 TLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCAVPTSKCKANG 319

Query: 202 GPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLT 238
           G  +C++ IQ+AFSGTD++L   N+WYEV+ LRQYSL DLY+N  DSL+
Sbjct: 320 GQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLS 363

[Close]
BLAST of Carg03616 vs. TAIR10
Match: AT3G48630.1 (unknown protein)

HSP 1 Score: 62.4 bits (150), Expect = 4.5e-10
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0 

Query: 112 YMVAFAGRKYAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCAR 164
           Y V   G +  +   P F+++   IVTSFT V+EF+KGRLQNL+WKRD CA+
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK 53

[Close]
BLAST of Carg03616 vs. TrEMBL
Match: tr|A0A0A0LGU1|A0A0A0LGU1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782730 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.8e-117
Identity = 217/245 (88.57%), Postives = 230/245 (93.88%), Query Frame = 0 

Query: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60
           MAIS LSP S VL+LLVTAVV+EA DNNRVFSPC DTTVE SDGFTLG AFATEQKF FN
Sbjct: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60

Query: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRK 120
           KTL+LSPCDSRL LTNGN+LISVFRPKVDEISLLT+NT+ SVSSF+PSS+GYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180
           YAARSPPIFV+D QHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNN TFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180

Query: 181 RTNNCKNS-GPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQ 240
           RTN+CKN+ G VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSL +LYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 245
           YNKIF
Sbjct: 241 YNKIF 245

[Close]
BLAST of Carg03616 vs. TrEMBL
Match: tr|A0A1S3B6Y8|A0A1S3B6Y8_CUCME (uncharacterized protein LOC103486692 OS=Cucumis melo OX=3656 GN=LOC103486692 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 7.4e-116
Identity = 215/245 (87.76%), Postives = 230/245 (93.88%), Query Frame = 0 

Query: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60
           MAIS  SP S VL+LLVTAV+VEA DNNRVFSPC DTTVE SDGFTLG AFAT+QKF FN
Sbjct: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60

Query: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRK 120
           KTL+LSPCDSRL LTNGN+LISVFRPKVDEISLLTVNT+ SVSSF+PSS+GYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180
           YAARSPPIFV+D QHIVTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180

Query: 181 RTNNCKNS-GPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQ 240
           RTN+CKN+ G VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSL +LYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 245
           YNKIF
Sbjct: 241 YNKIF 245

[Close]
BLAST of Carg03616 vs. TrEMBL
Match: tr|A0A2I4FY72|A0A2I4FY72_9ROSI (uncharacterized protein LOC109003077 OS=Juglans regia OX=51240 GN=LOC109003077 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.1e-86
Identity = 162/234 (69.23%), Postives = 192/234 (82.05%), Query Frame = 0 

Query: 12  VLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFNKTLKLSPCDSR 71
           ++ + + A+ V A DNNRV+SPC+DTTV +SDGFT  +AFA    F +N TL+LSPCDSR
Sbjct: 8   MMAVALLALSVGASDNNRVYSPCLDTTVARSDGFTFAIAFAARNSFFYNNTLQLSPCDSR 67

Query: 72  LALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRKYAARSPPIFVS 131
           L L++ N+ I++FRPKVDEISLLTVN+    SSF P S+GYMVAFAGRKYAARS P FV+
Sbjct: 68  LGLSS-NSQIALFRPKVDEISLLTVNS----SSFTPDSYGYMVAFAGRKYAARSTPAFVA 127

Query: 132 DGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAIRTNNCK-NSGP 191
           +  + VTSFTLVLEF+KGRLQNL+WKRDGCA+CS N  FVC+NNQDCAI+T++CK + G 
Sbjct: 128 NSSYTVTSFTLVLEFQKGRLQNLYWKRDGCAKCSGNSNFVCLNNQDCAIKTSSCKIHGGT 187

Query: 192 VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQYNKIF 245
           VDCSL IQLAFSGTDKHLS  NSWYEV  LRQYSL  LYSNLKDSLTSQY+KIF
Sbjct: 188 VDCSLGIQLAFSGTDKHLSALNSWYEVENLRQYSLYGLYSNLKDSLTSQYDKIF 236

[Close]
BLAST of Carg03616 vs. TrEMBL
Match: tr|A0A2N9IT14|A0A2N9IT14_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55560 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 3.6e-86
Identity = 160/222 (72.07%), Postives = 182/222 (81.98%), Query Frame = 0 

Query: 24   ARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFNKTLKLSPCDSRLALTNGNALISV 83
            A DNN VFSPC+DTTV +SDGFTLG+AFA    F  N TL+LSPCD+RL L++ N+ I++
Sbjct: 1246 ASDNNGVFSPCLDTTVARSDGFTLGIAFALRTSFFINTTLQLSPCDTRLRLSSSNSQIAL 1305

Query: 84   FRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRKYAARSPPIFVSDGQHIVTSFTLV 143
            FRPKVDEISLLTVN+    SSFNP + G+MVAFAGRKYAARSPP FV++    VTSFTLV
Sbjct: 1306 FRPKVDEISLLTVNS----SSFNPDTLGFMVAFAGRKYAARSPPAFVANSTFTVTSFTLV 1365

Query: 144  LEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAIRTNNCKN-SGPVDCSLAIQLAFS 203
            LEF+KGRLQNL+WKRDGC  CS N  FVC+NNQDCAI+TNNCKN  G VDCSL IQLAFS
Sbjct: 1366 LEFQKGRLQNLYWKRDGCNGCSGNTNFVCLNNQDCAIKTNNCKNHGGTVDCSLGIQLAFS 1425

Query: 204  GTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQYNKIF 245
            GTDKHLS  NSWYEV+ LRQYSL  +YSNLKDSLTSQY+  F
Sbjct: 1426 GTDKHLSALNSWYEVANLRQYSLYGVYSNLKDSLTSQYSNFF 1463

[Close]
BLAST of Carg03616 vs. TrEMBL
Match: tr|A0A2I4H4U4|A0A2I4H4U4_9ROSI (uncharacterized protein LOC109013515 OS=Juglans regia OX=51240 GN=LOC109013515 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.0e-85
Identity = 161/234 (68.80%), Postives = 191/234 (81.62%), Query Frame = 0 

Query: 12  VLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFNKTLKLSPCDSR 71
           + ++ + AV V A DNNR+ SPC DTTV +SDGFT  +AFA+   F++N TL+LSPCDSR
Sbjct: 9   ITMMAMAAVFVGASDNNRIHSPCSDTTVARSDGFTFAIAFASRNSFLYNSTLQLSPCDSR 68

Query: 72  LALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRKYAARSPPIFVS 131
           L L++  + I++FRPKVDEISLLTVN+    SSF P S+GYMVAFAGRKYAARS P FV+
Sbjct: 69  LHLSS-KSQIALFRPKVDEISLLTVNS----SSFTPDSYGYMVAFAGRKYAARSVPTFVA 128

Query: 132 DGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAIRTNNCKNSG-P 191
           +  + VTSFTLVLEF+KGRLQNL+WKRDGC++CS N  FVC+NNQ CAI+T++CKN G  
Sbjct: 129 NSSYTVTSFTLVLEFQKGRLQNLYWKRDGCSKCSGNSNFVCLNNQHCAIKTSSCKNHGST 188

Query: 192 VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQYNKIF 245
           VDCSL IQLAFSGTDKHLS  NSWYEV +LRQYSL  LYSNLKDSLTSQYNKIF
Sbjct: 189 VDCSLGIQLAFSGTDKHLSALNSWYEVEKLRQYSLYGLYSNLKDSLTSQYNKIF 237

The following BLAST results are available for this feature:
BLAST of Carg03616 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022935582.12.2e-135100.00uncharacterized protein LOC111442414 [Cucurbita moschata][more]
XP_022983083.17.0e-13498.78uncharacterized protein LOC111481736 [Cucurbita maxima][more]
XP_023528901.19.1e-13498.78uncharacterized protein LOC111791684 [Cucurbita pepo subsp. pepo][more]
XP_023538924.11.4e-11889.02uncharacterized protein LOC111799707 [Cucurbita pepo subsp. pepo][more]
XP_022939140.13.1e-11888.62uncharacterized protein LOC111445105 [Cucurbita moschata][more]
BLAST of Carg03616 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G11800.19.2e-8061.97unknown protein[more]
AT3G44150.12.7e-7963.80unknown protein[more]
AT2G15910.13.3e-6152.84CSL zinc finger domain-containing protein[more]
AT3G48630.14.5e-1051.92unknown protein[more]
BLAST of Carg03616 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg03616 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LGU1|A0A0A0LGU1_CUCSA1.8e-11788.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782730 PE=4 SV=1[more]
tr|A0A1S3B6Y8|A0A1S3B6Y8_CUCME7.4e-11687.76uncharacterized protein LOC103486692 OS=Cucumis melo OX=3656 GN=LOC103486692 PE=... [more]
tr|A0A2I4FY72|A0A2I4FY72_9ROSI2.1e-8669.23uncharacterized protein LOC109003077 OS=Juglans regia OX=51240 GN=LOC109003077 P... [more]
tr|A0A2N9IT14|A0A2N9IT14_FAGSY3.6e-8672.07Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55560 PE=4 SV=1[more]
tr|A0A2I4H4U4|A0A2I4H4U4_9ROSI1.0e-8568.80uncharacterized protein LOC109013515 OS=Juglans regia OX=51240 GN=LOC109013515 P... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03616-RACarg03616-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21454FAMILY NOT NAMEDcoord: 10..244
NoneNo IPR availablePANTHERPTHR21454:SF20SUBFAMILY NOT NAMEDcoord: 10..244

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg03616Cla008615Watermelon (97103) v1carwmB0239
Carg03616Cla017610Watermelon (97103) v1carwmB0237
Carg03616Csa3G782730Cucumber (Chinese Long) v2carcuB0276
Carg03616Csa6G426900Cucumber (Chinese Long) v2carcuB0280
Carg03616MELO3C014523Melon (DHL92) v3.5.1carmeB0252
Carg03616MELO3C009553Melon (DHL92) v3.5.1carmeB0251
Carg03616ClCG02G022470Watermelon (Charleston Gray)carwcgB0241
Carg03616ClCG10G018190Watermelon (Charleston Gray)carwcgB0240
Carg03616CSPI03G35760Wild cucumber (PI 183967)carcpiB0280
Carg03616CSPI06G23460Wild cucumber (PI 183967)carcpiB0284
Carg03616Cucsa.242000Cucumber (Gy14) v1carcgyB0294
Carg03616CmaCh14G003680Cucurbita maxima (Rimu)carcmaB0343
Carg03616CmaCh20G001430Cucurbita maxima (Rimu)carcmaB0345
Carg03616CmaCh06G005340Cucurbita maxima (Rimu)carcmaB0350
Carg03616CmoCh14G003680Cucurbita moschata (Rifu)carcmoB0347
Carg03616CmoCh06G005360Cucurbita moschata (Rifu)carcmoB0351
Carg03616Lsi10G011330Bottle gourd (USVL1VR-Ls)carlsiB222
Carg03616Lsi03G018070Bottle gourd (USVL1VR-Ls)carlsiB225
Carg03616Cp4.1LG16g08270Cucurbita pepo (Zucchini)carcpeB0350
Carg03616Cp4.1LG03g00330Cucurbita pepo (Zucchini)carcpeB0353
Carg03616Cp4.1LG08g09590Cucurbita pepo (Zucchini)carcpeB0354
Carg03616CsGy6G022770Cucumber (Gy14) v2carcgybB0267
Carg03616CsGy3G033230Cucumber (Gy14) v2carcgybB0263
Carg03616MELO3C009553.2Melon (DHL92) v3.6.1carmedB0261
Carg03616MELO3C014523.2Melon (DHL92) v3.6.1carmedB0262
Carg03616CsaV3_3G038120Cucumber (Chinese Long) v3carcucB0279
Carg03616CsaV3_6G038610Cucumber (Chinese Long) v3carcucB0282
Carg03616Cla97C10G201160Watermelon (97103) v2carwmbB0254
Carg03616Cla97C02G048550Watermelon (97103) v2carwmbB0255
Carg03616Bhi11G002037Wax gourdcarwgoB0321
Carg03616Bhi10G000151Wax gourdcarwgoB0328
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg03616Carg18405Silver-seed gourdcarcarB289
Carg03616Carg16225Silver-seed gourdcarcarB291
The following block(s) are covering this gene:
GeneOrganismBlock
Carg03616Cucurbita pepo (Zucchini)carcpeB0348
Carg03616Cucurbita pepo (Zucchini)carcpeB0351
Carg03616Cucumber (Chinese Long) v2carcuB0278
Carg03616Cucumber (Chinese Long) v3carcucB0280
Carg03616Bottle gourd (USVL1VR-Ls)carlsiB223
Carg03616Melon (DHL92) v3.5.1carmeB0253
Carg03616Melon (DHL92) v3.6.1carmedB0263
Carg03616Wax gourdcarwgoB0330
Carg03616Silver-seed gourdcarcarB276
Carg03616Silver-seed gourdcarcarB292
Carg03616Silver-seed gourdcarcarB294
Carg03616Cucumber (Gy14) v2carcgybB0266
Carg03616Cucumber (Gy14) v1carcgyB0291
Carg03616Cucurbita maxima (Rimu)carcmaB0347
Carg03616Cucurbita maxima (Rimu)carcmaB0351
Carg03616Cucurbita moschata (Rifu)carcmoB0348
Carg03616Cucurbita moschata (Rifu)carcmoB0349
Carg03616Cucurbita moschata (Rifu)carcmoB0352