Cucsa.242000 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.242000
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionCSL zinc finger domain-containing protein
Locationscaffold02047 : 1846748 .. 1849406 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCACCGTTGACAACTTCGGTGCCGGTTTTTCTTCTTCGGCAGAAGTTTCCATTTCGACCATGGCGATTTCCTATCTCTCACCGGCGTCCGCCGTGCTGATTCTCTTGGTTACGGCGGTGGTTGTCGAAGCTAGCGACAACAACCGAGTTTTCTCACCTTGCACTGACACAACTGTTGAAAATTCCGACGGCTTCACCTTAGGGTTTGCTTTTGCGACGGAGCAGAAGTTTTTCTTCAACAAAACATTGCAGTTGTCTCCTTGCGATAGCAGGCTTGGTCTTACGAATGGAAATTCTCTGATCTCTGTGTTTAGACCTAAGGTTGATGAGATCTCCCTCCTCACCATCAACACTTCTCGCTCTGTGTCCTCCTTCGATCCGGTTAGTTCTTCAAACTCTGCGTTCTTTGTTGATGTTGAATTTTTGGGTTTTCTGTTTTCTATTCGTTTGAAGATGAAACTAGTTTTACTTAGGATTTGTGCGAGTATTTGTCTAATGCAACGATCAATCTGTTTTGTGGGATAAGAGTGATAGGCTTTGTTAACTCTCCAACTAGGGCTTAGGAGGCAAAAAGAGCAGATCCTTATGAAATCACTTCGCCTACTTTGATTGCCTGATGCTAGTTCGATTTGATTTGGGATTTTTCGGTGTGTTATTTGATCATTGAGGGAAATTAGTAATCAATCTCCGTTTTTTGATAGTCTGCACGATTCAGTTTTATTGAGAAACTCAAATCTCAAACTTTAATAGGGAAAAAAGAAGGAACTTAGTTGGTGTTTGAGAGAGTAGAACCATATTAGAAGGAAGAAATTTATATCTCTGCTAGTTTGATTTCTATTGCTCACATAATTATGAATTTCTTTCTACTAGTTTATCTACGTTACCATCCTAGTTTTGGGTTCTTGTTACAAGTAAAGGAAACTGGGAAATTGAAGTTGGAACCTCTTGGTTCTTGGGACATACAAGTGTCAATCGAGCTAAGCTCTTGATGACATTTTGAGTTCTTATTACCAATCATGGACTCATGATTTCTTTTTCTCTTCTTTCATTATCAGTCTTCAAATGGCTATATGGTTGCATTTGCTGGTCGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTTGCAGATCAACAGCATATCGTAACCAGCTTTACTCTGGTAAGTTTATCTATTTATGGCATAGAAAGTATGCAATGATGATTTGATCCAGCTGTAAACAGGAAGCATGATCTTATAAAACTTAGGAGATCATGAGTTTGATCCATGGTGGTTAAGATTTAATATTCTGTGAGTTTTCCTGTCCAAATGTTGTAGGGTTAGACTAGTAATCTCGTGAGATTAGTCCAAATTCGTGTAAGCTGTTCAGACACTTACAAATATAATATATATATGTATAAATAAATAAAGACATAGAACGTATGGTATGGAATAGAATAACGTAACCTAAAGACCAGAGACACAATACTACACTAACTTGGTGGTATGTTTATTCAGAATTCAATGGATATATGGCAGAGGGTCGCATTGTAACAAATTTACTTTTATGTGAATGTGGTTGCCATAATATGGCAGTTTCCATACTTTTCGTTGTTAATCTCATTTATCCAACTGTGTAAAACTAATCGTGACATTATGACAGCATCCTTGGGTGAGAAGGGTAGGAGTTAGTGTTAGAGATGTGAGTGGGTAGGCTTGATAAAACATGATATGTTCAACATTTTCAAAACAGGATTTTAATTGTTTAGGGTCCCTCCGGAAACAAAAGATTAGATGAAAATAAGGTTGTATATATGTTTTTAGATGTGTGTTAGTGTTTGATAGCATATTTAGAAATTAGATTTTAAGTTAAGTAATTGTTCAAAATGTGTTTGATAAGCTATTTATAAACCATAAAACTACTTTACAATATTTGGTCAAGTATAAACTGTTAATTATTAGAATTTGTGACATGTTTTATTTTAAAATTTTCTATAATTATTATTTTGTAATATCCTGTAATTTATAATACGTTTGTTCTTTTAATTTTAAAAAATAGAAACTAGATCGCCTACCAAACATTTCTTCAACAAATCTAAAATTGTAAAACATAATCTAGACTGACTTCCAAACAGCTCCTCCGAGATTAAATAATCCATTGTTTTTTCTTGTGGATAGGTGCTTGAGTTTGAAAAAGGAAGGCTGCAAAACTTGTTCTGGAAAAGGGATGGTTGTGCTCGATGTTCAAACAATAGCACCTTTGTTTGCATCCACAATCAGGATTGCGCAATCAGAACAAACAGCTGCAAAAATAATGGTGGTTCCGTCGATTGTAGTCTCGCGATTCAGTTAGCATTCTCCGGCACGGATAAGCACCTTTCTGTCTTCAACTCTTGGTATGAAGTGTCGAGACTTCGTCAGTACTCACTCTTCAATCTGTATTCGAACCTCAAAGATTCTCTCACAAGTCAGTATAACAAGATTTTCTAATAGACCATATTTCTGTTGATGTATATTGTCATGATTTCCATCATTGTATGTTATAATTCAGTTTGTGCAACAAATTCGTTTGAAATCTTCTACATTTCTCATTAACTAAATGTGTTACAATAGGTTTGGGACGGCTAGTGTTTTGTATGTATTTTGTATACTATATCATAGTGTTCAATTTCTTCTCTTT

mRNA sequence

CATCACCGTTGACAACTTCGGTGCCGGTTTTTCTTCTTCGGCAGAAGTTTCCATTTCGACCATGGCGATTTCCTATCTCTCACCGGCGTCCGCCGTGCTGATTCTCTTGGTTACGGCGGTGGTTGTCGAAGCTAGCGACAACAACCGAGTTTTCTCACCTTGCACTGACACAACTGTTGAAAATTCCGACGGCTTCACCTTAGGGTTTGCTTTTGCGACGGAGCAGAAGTTTTTCTTCAACAAAACATTGCAGTTGTCTCCTTGCGATAGCAGGCTTGGTCTTACGAATGGAAATTCTCTGATCTCTGTGTTTAGACCTAAGGTTGATGAGATCTCCCTCCTCACCATCAACACTTCTCGCTCTGTGTCCTCCTTCGATCCGTCTTCAAATGGCTATATGGTTGCATTTGCTGGTCGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTTGCAGATCAACAGCATATCGTAACCAGCTTTACTCTGGTGCTTGAGTTTGAAAAAGGAAGGCTGCAAAACTTGTTCTGGAAAAGGGATGGTTGTGCTCGATGTTCAAACAATAGCACCTTTGTTTGCATCCACAATCAGGATTGCGCAATCAGAACAAACAGCTGCAAAAATAATGGTGGTTCCGTCGATTGTAGTCTCGCGATTCAGTTAGCATTCTCCGGCACGGATAAGCACCTTTCTGTCTTCAACTCTTGGTATGAAGTGTCGAGACTTCGTCAGTACTCACTCTTCAATCTGTATTCGAACCTCAAAGATTCTCTCACAAGTCAGTATAACAAGATTTTCTAATAGACCATATTTCTGTTGATGTATATTGTCATGATTTCCATCATTGTATGTTATAATTCAGTTTGTGCAACAAATTCGTTTGAAATCTTCTACATTTCTCATTAACTAAATGTGTTACAATAGGTTTGGGACGGCTAGTGTTTTGTATGTATTTTGTATACTATATCATAGTGTTCAATTTCTTCTCTTT

Coding sequence (CDS)

ATGGCGATTTCCTATCTCTCACCGGCGTCCGCCGTGCTGATTCTCTTGGTTACGGCGGTGGTTGTCGAAGCTAGCGACAACAACCGAGTTTTCTCACCTTGCACTGACACAACTGTTGAAAATTCCGACGGCTTCACCTTAGGGTTTGCTTTTGCGACGGAGCAGAAGTTTTTCTTCAACAAAACATTGCAGTTGTCTCCTTGCGATAGCAGGCTTGGTCTTACGAATGGAAATTCTCTGATCTCTGTGTTTAGACCTAAGGTTGATGAGATCTCCCTCCTCACCATCAACACTTCTCGCTCTGTGTCCTCCTTCGATCCGTCTTCAAATGGCTATATGGTTGCATTTGCTGGTCGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTTGCAGATCAACAGCATATCGTAACCAGCTTTACTCTGGTGCTTGAGTTTGAAAAAGGAAGGCTGCAAAACTTGTTCTGGAAAAGGGATGGTTGTGCTCGATGTTCAAACAATAGCACCTTTGTTTGCATCCACAATCAGGATTGCGCAATCAGAACAAACAGCTGCAAAAATAATGGTGGTTCCGTCGATTGTAGTCTCGCGATTCAGTTAGCATTCTCCGGCACGGATAAGCACCTTTCTGTCTTCAACTCTTGGTATGAAGTGTCGAGACTTCGTCAGTACTCACTCTTCAATCTGTATTCGAACCTCAAAGATTCTCTCACAAGTCAGTATAACAAGATTTTCTAA

Protein sequence

MAISYLSPASAVLILLVTAVVVEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFNKTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRKYAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAIRTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF*
Homology
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BLAST of Cucsa.242000 vs. TrEMBL
Match: A0A0A0LGU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782730 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 1.3e-135
Identity = 243/245 (99.18%), Postives = 244/245 (99.59%), Query Frame = 1 

Query: 1   MAISYLSPASAVLILLVTAVVVEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60
           MAISYLSPAS VLILLVTAVV+EASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN
Sbjct: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120
           KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180
           YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

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BLAST of Cucsa.242000 vs. TrEMBL
Match: V7BL67_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G267000g PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.3e-90
Identity = 165/239 (69.04%), Postives = 199/239 (83.26%), Query Frame = 1 

Query: 9   ASAVLILLVTAVVVEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFNK--TLQLS 68
           A+ V+++LV A   +A DNNRVFSPCTDT V+ SDGFT G  FA + KFF N   ++QLS
Sbjct: 9   AAIVVVVLVAAFPADAGDNNRVFSPCTDTQVQRSDGFTFGIVFAPKDKFFLNNNSSVQLS 68

Query: 69  PCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRKYAARSP 128
           PCD+RL L+N N  ISVFRPKVDEISLLT+N+S    SF   + GYMVAFAGRKYAARSP
Sbjct: 69  PCDTRLSLSNSNYQISVFRPKVDEISLLTVNSS----SFTADTYGYMVAFAGRKYAARSP 128

Query: 129 PIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAIRTNSCK 188
           P FVA+  + VTSFTLVLEF+KGRLQNL+WKRDGCA+CS+NS  VC++NQDCA++T+SCK
Sbjct: 129 PAFVANGTYTVTSFTLVLEFKKGRLQNLYWKRDGCAKCSSNSKAVCLNNQDCALQTSSCK 188

Query: 189 NNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
           ++GG+VDCS+ IQLAFSGTDKHL+VFNSWYEV  LRQYSL+ LYSNL+DSLTSQY++ F
Sbjct: 189 SHGGTVDCSIGIQLAFSGTDKHLAVFNSWYEVKNLRQYSLYGLYSNLRDSLTSQYDQFF 243

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BLAST of Cucsa.242000 vs. TrEMBL
Match: A0A151RTP4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_032519 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.7e-90
Identity = 164/239 (68.62%), Postives = 200/239 (83.68%), Query Frame = 1 

Query: 9   ASAVLILLVTAVVVEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFNK--TLQLS 68
           A+ V+  L  A++ +A D+NRVFSPC+DT V+ SDGFT G AFA++ KFF+N   +LQLS
Sbjct: 9   AAIVVAALAAALLADAGDDNRVFSPCSDTHVQRSDGFTFGIAFASKDKFFYNNNNSLQLS 68

Query: 69  PCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRKYAARSP 128
           PCDSRL L+N NS ISVFRPKVDEISLLT+N+S    SF   + GYMVAFAGR+YAARSP
Sbjct: 69  PCDSRLSLSNSNSQISVFRPKVDEISLLTVNSS----SFTADTYGYMVAFAGRRYAARSP 128

Query: 129 PIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAIRTNSCK 188
           P FVA+  + VTSFTLVLEF+KGRLQNL+WKRDGC++CS NS  VC++NQDCA++T+SCK
Sbjct: 129 PAFVANSTYTVTSFTLVLEFKKGRLQNLYWKRDGCSKCSGNSKAVCLNNQDCALQTSSCK 188

Query: 189 NNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
           ++GG+VDCS+ IQLAFSGTDKHL+V NSWYEV  LRQYSL+ LYSNL+DSLTSQY+K F
Sbjct: 189 SHGGTVDCSIGIQLAFSGTDKHLAVLNSWYEVKNLRQYSLYGLYSNLRDSLTSQYDKFF 243

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BLAST of Cucsa.242000 vs. TrEMBL
Match: A0A061EVR7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_023045 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 3.8e-90
Identity = 170/243 (69.96%), Postives = 200/243 (82.30%), Query Frame = 1 

Query: 8   PASAVLILLVTA----VVVEASDN-NRVFSPCTDTTVENSDGFTLGFAFATEQKFFFNKT 67
           PA+  L+LL+TA    ++VE+SD+ N  ++PC+DT ++ SDGFT G AFA+ Q FFFN +
Sbjct: 4   PAAYFLLLLMTAATAPLLVESSDDTNHAYTPCSDTKIQLSDGFTFGIAFASRQSFFFNSS 63

Query: 68  LQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSS-NGYMVAFAGRKY 127
           LQLSPCD RL L+N NS +++FRPKVDEISLLTINTS    SF P S  GYMVAFAGRKY
Sbjct: 64  LQLSPCDRRLSLSNSNSRVALFRPKVDEISLLTINTS----SFSPDSVGGYMVAFAGRKY 123

Query: 128 AARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAIR 187
           AARS P FVA+  + VTSFTLVLEF+KGRLQNL+WKRDGCA+CS  S FVC++ QDCAI 
Sbjct: 124 AARSLPAFVANNTYTVTSFTLVLEFKKGRLQNLYWKRDGCAQCSGKSNFVCLNKQDCAIS 183

Query: 188 TNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQY 245
           TN+CKN+GGSVDCSL IQLAFSGTDKHLSV NSWYEV  LRQYSL+ LYSNL+DSL+SQY
Sbjct: 184 TNNCKNHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLSSQY 242

[Close]
BLAST of Cucsa.242000 vs. TrEMBL
Match: A0A103XGX2_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007413 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 3.8e-90
Identity = 169/238 (71.01%), Postives = 191/238 (80.25%), Query Frame = 1 

Query: 11  AVLILLVTAV--VVEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFNKTLQLSPC 70
           AV++ L T +  V  +SDNN VFSPC D +VE SDGFT G AFA    FFFN ++QLSPC
Sbjct: 12  AVVVTLSTKLYLVESSSDNNHVFSPCADASVERSDGFTFGIAFAARTAFFFNNSVQLSPC 71

Query: 71  DSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSS-NGYMVAFAGRKYAARSPP 130
           D RL L++ NS +S+FRPKVDEISLLT+N+S    SF P S  GYMVAFAGRKYAARS P
Sbjct: 72  DRRLSLSSSNSQLSIFRPKVDEISLLTVNSS----SFSPDSYGGYMVAFAGRKYAARSIP 131

Query: 131 IFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAIRTNSCKN 190
            FVA+  +IVTSFTLVLEF+KGRLQNL+WKRDGC+ CS  S FVC++NQDCAIRT+SCKN
Sbjct: 132 AFVANSTYIVTSFTLVLEFQKGRLQNLYWKRDGCSSCSGKSNFVCLNNQDCAIRTSSCKN 191

Query: 191 NGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
            GG+VDCSL IQLAFSGTDKH SVFNSWYEV  LRQYSLF LY NLKDSLTSQYN  F
Sbjct: 192 RGGNVDCSLGIQLAFSGTDKHESVFNSWYEVKNLRQYSLFGLYKNLKDSLTSQYNSFF 245

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BLAST of Cucsa.242000 vs. TAIR10
Match: AT3G11800.1 (AT3G11800.1 unknown protein)

HSP 1 Score: 308.9 bits (790), Expect = 2.8e-84
Identity = 148/233 (63.52%), Postives = 183/233 (78.54%), Query Frame = 1 

Query: 16  LVTAVVVEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFF---NKTLQLSPCDSRL 75
           ++T+ + EA DNN+V+SPC+D+TV   DGFT G AFA +  FF    +K++Q SPCD R 
Sbjct: 14  VLTSSLTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRH 73

Query: 76  GLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRKYAARSPPIFVAD 135
              NGNS ++VFRPKVDEI+LLTINTS S S    +S GYMVAFAG KYAARS PI VAD
Sbjct: 74  LSLNGNSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVAD 133

Query: 136 QQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAIRTNSCKNNGGSV 195
             HIVTSFTLVLEF+KGRL+N+FWK+DGC++CS +S FVC++ ++CAI+  +CKN GG V
Sbjct: 134 SNHIVTSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQV 193

Query: 196 DCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
           DCSL IQLAFSGTDKH +  NSWYEV+ L+QYSL+ LYSNLKDSLT+ +  IF
Sbjct: 194 DCSLGIQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPFKNIF 246

[Close]
BLAST of Cucsa.242000 vs. TAIR10
Match: AT3G44150.1 (AT3G44150.1 unknown protein)

HSP 1 Score: 306.6 bits (784), Expect = 1.4e-83
Identity = 151/247 (61.13%), Postives = 182/247 (73.68%), Query Frame = 1 

Query: 9   ASAVLILLVTAVVV----------EASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFF 68
           +S  L LLV + V+           + + N ++SPC+DT ++ SDGFT G AF++   FF
Sbjct: 3   SSKTLTLLVFSAVILTVALGGDSGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFF 62

Query: 69  FNKTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAG 128
            N+T+ LSPCD RL L   NS  SVFRPK+DEISLL+INTS   + F  +  GYMVAFAG
Sbjct: 63  INQTVLLSPCDRRLSLAAMNSQFSVFRPKIDEISLLSINTS---AFFPDNYGGYMVAFAG 122

Query: 129 RKYAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDC 188
           RKYAARS P F+A+   IVTSFTLV+EF+KGRLQNL+WKRDGCA C  N  FVC++ QDC
Sbjct: 123 RKYAARSIPAFIANSTFIVTSFTLVMEFQKGRLQNLYWKRDGCASCKGNQNFVCLNKQDC 182

Query: 189 AIRTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLT 246
           AIRT SCK  GG+VDCSL IQLAFSGTDKHL+V NSWYEV  L+QYSL+ LYSNLK SLT
Sbjct: 183 AIRTPSCKGRGGAVDCSLGIQLAFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLT 242

[Close]
BLAST of Cucsa.242000 vs. TAIR10
Match: AT2G15910.1 (AT2G15910.1 CSL zinc finger domain-containing protein)

HSP 1 Score: 238.8 bits (608), Expect = 3.5e-63
Identity = 123/242 (50.83%), Postives = 175/242 (72.31%), Query Frame = 1 

Query: 12  VLILLVTAVV---VEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFNKTLQLSPC 71
           ++I+++  +V   V A+DNN V+SPC+DT +   DGFT+G A ++++ FF ++ +QLSPC
Sbjct: 127 MMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQ-VQLSPC 186

Query: 72  DSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPS-SNGYMVAFAGRKYAARSPP 131
           D+RLGL    + +++FRPKVDEISLL+I+TS+    F+PS + G+MV FAG KYAARS P
Sbjct: 187 DTRLGLAAKMAQLALFRPKVDEISLLSIDTSK----FNPSEAGGFMVGFAGSKYAARSYP 246

Query: 132 IFVADQQHIVTSFTLV---------LEFEKGRLQNLFWKRDGCARC--SNNSTFVCIHNQ 191
           + VAD  + +T+FTLV         LEF+KG LQNLFWK  GC  C  + +S+ VC++  
Sbjct: 247 VKVADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGT 306

Query: 192 DCAIRTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDS 239
           DCA+ T+ CK NGG  +C++ IQ+AFSGTD++L   N+WYEV+ LRQYSL +LY+N  DS
Sbjct: 307 DCAVPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDS 363

[Close]
BLAST of Cucsa.242000 vs. TAIR10
Match: AT3G48630.1 (AT3G48630.1 unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 7.7e-10
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 1 

Query: 112 YMVAFAGRKYAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAR 164
           Y V   G +  +   P F+A+   IVTSFT V+EF+KGRLQNL+WKRD CA+
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK 53

[Close]
BLAST of Cucsa.242000 vs. NCBI nr
Match: gi|449437484|ref|XP_004136522.1| (PREDICTED: uncharacterized protein LOC101209667 [Cucumis sativus])

HSP 1 Score: 490.3 bits (1261), Expect = 1.9e-135
Identity = 243/245 (99.18%), Postives = 244/245 (99.59%), Query Frame = 1 

Query: 1   MAISYLSPASAVLILLVTAVVVEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60
           MAISYLSPAS VLILLVTAVV+EASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN
Sbjct: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120
           KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180
           YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]
BLAST of Cucsa.242000 vs. NCBI nr
Match: gi|659084531|ref|XP_008442938.1| (PREDICTED: uncharacterized protein LOC103486692 [Cucumis melo])

HSP 1 Score: 480.3 bits (1235), Expect = 2.0e-132
Identity = 237/245 (96.73%), Postives = 242/245 (98.78%), Query Frame = 1 

Query: 1   MAISYLSPASAVLILLVTAVVVEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60
           MAISY SPASAVLILLVTAV+VEA DNNRVFSPCTDTTVE SDGFTLGFAFAT+QKFFFN
Sbjct: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120
           KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLT+NTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180
           YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]
BLAST of Cucsa.242000 vs. NCBI nr
Match: gi|743878329|ref|XP_011035616.1| (PREDICTED: uncharacterized protein LOC105133355 isoform X2 [Populus euphratica])

HSP 1 Score: 340.9 bits (873), Expect = 1.9e-90
Identity = 170/243 (69.96%), Postives = 194/243 (79.84%), Query Frame = 1 

Query: 6   LSPASAVLILLVTAVV--VEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFNKTL 65
           L P    L+ + ++ +  V++ + N V+SPC DTTV+ SDGFT   AF++   FFFN TL
Sbjct: 8   LKPLLLFLVTITSSTILPVQSDNTNHVYSPCADTTVQVSDGFTFSIAFSSRTAFFFNSTL 67

Query: 66  QLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSS-NGYMVAFAGRKYA 125
           QLSPCDSRL LT+ NS ISVFRPKVDEISLLTINTS    SF P +  GYMVAFAGRKYA
Sbjct: 68  QLSPCDSRLSLTSQNSQISVFRPKVDEISLLTINTS----SFSPQNYGGYMVAFAGRKYA 127

Query: 126 ARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAIRT 185
           ARS P FVA+  + VTSFTLVLEF+KGRLQNL+WKRDGCA+CS NS FVC++NQDCAIRT
Sbjct: 128 ARSLPAFVANSTYTVTSFTLVLEFKKGRLQNLYWKRDGCAKCSGNSKFVCLNNQDCAIRT 187

Query: 186 NSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYN 245
           +SCK NGGSVDCSL IQLAFSGTDKH S  NSWYEV  LRQYSL+ LYSNL+DSLTSQYN
Sbjct: 188 SSCKKNGGSVDCSLGIQLAFSGTDKHFSALNSWYEVENLRQYSLYGLYSNLRDSLTSQYN 246

[Close]
BLAST of Cucsa.242000 vs. NCBI nr
Match: gi|593690356|ref|XP_007145779.1| (hypothetical protein PHAVU_007G267000g [Phaseolus vulgaris])

HSP 1 Score: 340.9 bits (873), Expect = 1.9e-90
Identity = 165/239 (69.04%), Postives = 199/239 (83.26%), Query Frame = 1 

Query: 9   ASAVLILLVTAVVVEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFNK--TLQLS 68
           A+ V+++LV A   +A DNNRVFSPCTDT V+ SDGFT G  FA + KFF N   ++QLS
Sbjct: 9   AAIVVVVLVAAFPADAGDNNRVFSPCTDTQVQRSDGFTFGIVFAPKDKFFLNNNSSVQLS 68

Query: 69  PCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRKYAARSP 128
           PCD+RL L+N N  ISVFRPKVDEISLLT+N+S    SF   + GYMVAFAGRKYAARSP
Sbjct: 69  PCDTRLSLSNSNYQISVFRPKVDEISLLTVNSS----SFTADTYGYMVAFAGRKYAARSP 128

Query: 129 PIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAIRTNSCK 188
           P FVA+  + VTSFTLVLEF+KGRLQNL+WKRDGCA+CS+NS  VC++NQDCA++T+SCK
Sbjct: 129 PAFVANGTYTVTSFTLVLEFKKGRLQNLYWKRDGCAKCSSNSKAVCLNNQDCALQTSSCK 188

Query: 189 NNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
           ++GG+VDCS+ IQLAFSGTDKHL+VFNSWYEV  LRQYSL+ LYSNL+DSLTSQY++ F
Sbjct: 189 SHGGTVDCSIGIQLAFSGTDKHLAVFNSWYEVKNLRQYSLYGLYSNLRDSLTSQYDQFF 243

[Close]
BLAST of Cucsa.242000 vs. NCBI nr
Match: gi|743906053|ref|XP_011046438.1| (PREDICTED: uncharacterized protein LOC105141047 [Populus euphratica])

HSP 1 Score: 340.9 bits (873), Expect = 1.9e-90
Identity = 170/243 (69.96%), Postives = 193/243 (79.42%), Query Frame = 1 

Query: 6   LSPASAVLILLVTAVV--VEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFNKTL 65
           L P    L+ + ++ +  V++ + N V+SPC DTTV+ SDGFT   AF++   FFFN TL
Sbjct: 8   LKPLLLFLVTITSSTILPVQSDNTNHVYSPCADTTVQVSDGFTFSIAFSSRNAFFFNSTL 67

Query: 66  QLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSS-NGYMVAFAGRKYA 125
           QLSPCDSRL LT+ NS ISVFRPKVDEISLLTINTS    SF P    GYMVAFAGRKYA
Sbjct: 68  QLSPCDSRLSLTSQNSQISVFRPKVDEISLLTINTS----SFSPGDYGGYMVAFAGRKYA 127

Query: 126 ARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAIRT 185
           ARS P FVA+  + VTSFTLVLEF+KGRLQNL+WKRDGCA+CS NS FVC++NQDCAIRT
Sbjct: 128 ARSLPAFVANSTYTVTSFTLVLEFKKGRLQNLYWKRDGCAKCSGNSKFVCLNNQDCAIRT 187

Query: 186 NSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYN 245
           +SCK NGGSVDCSL IQLAFSGTDKH S  NSWYEV  LRQYSL+ LYSNL+DSLTSQYN
Sbjct: 188 SSCKKNGGSVDCSLGIQLAFSGTDKHFSALNSWYEVENLRQYSLYGLYSNLRDSLTSQYN 246

The following BLAST results are available for this feature:
BLAST of Cucsa.242000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGU1_CUCSA1.3e-13599.18Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782730 PE=4 SV=1[more]
V7BL67_PHAVU1.3e-9069.04Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G267000g PE=4 SV=1[more]
A0A151RTP4_CAJCA1.7e-9068.62Uncharacterized protein OS=Cajanus cajan GN=KK1_032519 PE=4 SV=1[more]
A0A061EVR7_THECC3.8e-9069.96Uncharacterized protein OS=Theobroma cacao GN=TCM_023045 PE=4 SV=1[more]
A0A103XGX2_CYNCS3.8e-9071.01Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007413 PE=4 ... [more]
BLAST of Cucsa.242000 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G11800.12.8e-8463.52 unknown protein[more]
AT3G44150.11.4e-8361.13 unknown protein[more]
AT2G15910.13.5e-6350.83 CSL zinc finger domain-containing protein[more]
AT3G48630.17.7e-1053.85 unknown protein[more]
BLAST of Cucsa.242000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437484|ref|XP_004136522.1|1.9e-13599.18PREDICTED: uncharacterized protein LOC101209667 [Cucumis sativus][more]
gi|659084531|ref|XP_008442938.1|2.0e-13296.73PREDICTED: uncharacterized protein LOC103486692 [Cucumis melo][more]
gi|743878329|ref|XP_011035616.1|1.9e-9069.96PREDICTED: uncharacterized protein LOC105133355 isoform X2 [Populus euphratica][more]
gi|593690356|ref|XP_007145779.1|1.9e-9069.04hypothetical protein PHAVU_007G267000g [Phaseolus vulgaris][more]
gi|743906053|ref|XP_011046438.1|1.9e-9069.96PREDICTED: uncharacterized protein LOC105141047 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.242000.1Cucsa.242000.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21454FAMILY NOT NAMEDcoord: 12..245
score: 3.9E
NoneNo IPR availablePANTHERPTHR21454:SF3SUBFAMILY NOT NAMEDcoord: 12..245
score: 3.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.242000Cla008615Watermelon (97103) v1cgywmB458
Cucsa.242000Cla017610Watermelon (97103) v1cgywmB456
Cucsa.242000Csa3G782730Cucumber (Chinese Long) v2cgycuB344
Cucsa.242000Csa6G426900Cucumber (Chinese Long) v2cgycuB347
Cucsa.242000MELO3C014523Melon (DHL92) v3.5.1cgymeB414
Cucsa.242000MELO3C009553Melon (DHL92) v3.5.1cgymeB412
Cucsa.242000ClCG10G018190Watermelon (Charleston Gray)cgywcgB426
Cucsa.242000ClCG02G022470Watermelon (Charleston Gray)cgywcgB428
Cucsa.242000CSPI06G23460Wild cucumber (PI 183967)cgycpiB363
Cucsa.242000CSPI03G35760Wild cucumber (PI 183967)cgycpiB360
Cucsa.242000CmaCh20G001430Cucurbita maxima (Rimu)cgycmaB0678
Cucsa.242000CmaCh14G003680Cucurbita maxima (Rimu)cgycmaB0674
Cucsa.242000CmaCh06G005340Cucurbita maxima (Rimu)cgycmaB0681
Cucsa.242000CmoCh06G005360Cucurbita moschata (Rifu)cgycmoB0681
Cucsa.242000CmoCh14G003680Cucurbita moschata (Rifu)cgycmoB0675
Cucsa.242000Lsi03G018070Bottle gourd (USVL1VR-Ls)cgylsiB402
Cucsa.242000Lsi10G011330Bottle gourd (USVL1VR-Ls)cgylsiB395
Cucsa.242000Cp4.1LG16g08270Cucurbita pepo (Zucchini)cgycpeB0640
Cucsa.242000Cp4.1LG03g00330Cucurbita pepo (Zucchini)cgycpeB0644
Cucsa.242000Cp4.1LG08g09590Cucurbita pepo (Zucchini)cgycpeB0650
Cucsa.242000MELO3C009553.2Melon (DHL92) v3.6.1cgymedB408
Cucsa.242000MELO3C014523.2Melon (DHL92) v3.6.1cgymedB409
Cucsa.242000CsaV3_3G038120Cucumber (Chinese Long) v3cgycucB363
Cucsa.242000CsaV3_6G038610Cucumber (Chinese Long) v3cgycucB366
Cucsa.242000Cla97C10G201160Watermelon (97103) v2cgywmbB425
Cucsa.242000Cla97C02G048550Watermelon (97103) v2cgywmbB427
Cucsa.242000Bhi10G000151Wax gourdcgywgoB487
Cucsa.242000Bhi11G002037Wax gourdcgywgoB480
Cucsa.242000Carg16225Silver-seed gourdcarcgyB0758
Cucsa.242000Carg18405Silver-seed gourdcarcgyB0481
Cucsa.242000Carg03616Silver-seed gourdcarcgyB0294
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.242000Cucumber (Chinese Long) v3cgycucB365
Cucsa.242000Wax gourdcgywgoB489
Cucsa.242000Cucumber (Gy14) v1cgycgyB027
Cucsa.242000Cucurbita maxima (Rimu)cgycmaB0683
Cucsa.242000Cucurbita maxima (Rimu)cgycmaB0680
Cucsa.242000Cucurbita moschata (Rifu)cgycmoB0680
Cucsa.242000Cucurbita moschata (Rifu)cgycmoB0683
Cucsa.242000Melon (DHL92) v3.5.1cgymeB415
Cucsa.242000Cucurbita pepo (Zucchini)cgycpeB0643
Cucsa.242000Bottle gourd (USVL1VR-Ls)cgylsiB398
Cucsa.242000Melon (DHL92) v3.6.1cgymedB410
Cucsa.242000Silver-seed gourdcarcgyB0282
Cucsa.242000Silver-seed gourdcarcgyB0923