CmoCh06G005360 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G005360
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCSL zinc finger domain-containing protein
LocationCmo_Chr06 : 2589922 .. 2592169 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCCACTTTCAATTTCCAGTCCAAACATGGCGATTTACGATCTCTCAACGGCATCCGCCGTACTGCTTCTCCTAATGACGGCGGCGGCCGTTGAAGCTAGGGACAGCAACCGAGTTTTCTCTCCTTGCGCCGACACGACTGTTGAGAAGTCCGACGGTTTCACCTTAGGGCTTGCTTTTGCGACGCAGCAGAAGTTCGTGTTTAACAAAACGTTGAATTTGTCTCCTTGTGACAGTAGGCTTGCTCTTACGAATGGAAATTCTCTGATCTCTATGTTTAGACCTATGGTTGATGAGATCTCCCTCCTCACCGTCAATACTACTCCCTCCGTGTCCAATTTCAATCCGGTTAGTTCTTCGAATTCTTTGTTCTTTTTCCTCTTTTGATGTCAAATTTATCGGTTGGTTCTGTTTGATCTTCGTTTGAAGTTGATACGAGCGCTAGTATTAGATTTTGTGCGTGAGTTTGTCGAATCGGATGGTTATTAGGTTTTGTGAAATTGAGGTAATAGGTTTTGTATGACTCTCAAATCAAACATGGGTTTGGTTTCTAAACCCTACTCCTAAGCACGAAACAGGGGGGCAAACAGAACAGATCATTTTGAAATCACTTCACGTGCTTTAATTGTATGATTCAAGCTCGATTTGATTTGGGATTTTTTTGGTATATGAATTGTTTCTTTGAGGATATTATAATCAATAGCTATTGGTTGGCATTCTGCATTACTCAATGTTGACAAGAAACTCCAATGTTGATGTTTGGTTGGAAAAATAAGGAATTTCACTGAAGATGGTATTAAGGCGTTCTACTCTCAGTTCGTGTTTGAGAGAGTAGATAGTCGCCCTCCCTCTTCCGCCTTAAGATGATGCCTTCCTAATGCTTGGGCTGCTTTGTTTCCATAGAAGGAAGAGATTAATTGTATGCGCTTGTTTGATTTCTATTGCTCACGTAGATCTAAAATCTTTTCTATTAGTTTATTTACTACAAATGCTAGTGTTCTGTTCTTACCAGTGGTGGACTCACTATTCCTTTTCAATTTCATCCATTACCAGTCTTCCAATAGCTATATGGTTGCATTTGCTGGACGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTCGCTGATGAACAACATGCCGTGACTAGCTTTACTCTGGTAAGTTCATGGCATAGGAAGTAGAAAGTAAACTAAAGACACAAGACATGGATATAATAGAACACTGACTTTCTGATATGTTGTTTTTAAGAATATGACATCCCAAGATGAGGCCTTGTTGGCCAAGGTTCGTGGTGTCCGAGTGTTGCCTATGATAGGGGGGTTCATGTAACTAATAATCGTTCGATAAACATTCAAAATACTTTTGTATTTTCACACTCTTCTATTCAATGGTTGCAAAATTATTTGCCACCTTACAACAACTTCCTCCAATAATTTCTTGTAATGAGAAGGGGAGAGGATTAGACTAGTTCTGTGAGATTACACATCGGATGGGGAAGAGAACGAAACATTCTTTATAAGGGTGTGGAAAACTCTCCCTAATAAAAGCGTTTTAAAAACTTTGAGGGGAAGCCCGAAAGTGAAAGCCCAAATAGAACAATATCCGTTAGCGGTGTGACTTCTAATCCTAGAGAAGTGTTTGGACAATCCATTGTGCTCTTTATGATTATTTTCACATTGGCATCAATTCCATCAAATGTTCTCGTGTACAGGTGCTCGAGTTCGAGAAGGGCAGGCTGCAAAACCTGTTCTGGAAAAGGGACGGTTGTGCTCAATGCTCAAACAACAACACCTTTGTATGCATCAACAATCAGGATTGTGCAATCAGAACAAGCAACTGCAAATATCGTGGCGGTCCTGTCGATTGCAGTCTTGCTATACAACTAGCATTCTCGGGCACCGATAAGCACCTTTCGGTTTTCAACTCTTGGTATGAAGTCTCAAGACTTCGCCAGTACTCGCTCTTCAATCTGTATTCAAATCTCAAAGATTCTCTCACTAGTCAGTACAACAAGATCTTCCAATAGAGCATAGCACATATATTTTGGTTAATGCATATTCCCATACATGTATGTTGTAATTCAGTTTAAGCATCAAATTCCTTTCATATCTTAAATGATTCCCCATACGCAGGGCTACCTTATATGTATACTAAAGAGTATTTCGGATACACAGTCGATCGGACTCTAATACTTATATAATTATAAGTTTGCACACGTGTGAAACCTTCGTTTTTTGAATCGATAAA

mRNA sequence

TTTCCACTTTCAATTTCCAGTCCAAACATGGCGATTTACGATCTCTCAACGGCATCCGCCGTACTGCTTCTCCTAATGACGGCGGCGGCCGTTGAAGCTAGGGACAGCAACCGAGTTTTCTCTCCTTGCGCCGACACGACTGTTGAGAAGTCCGACGGTTTCACCTTAGGGCTTGCTTTTGCGACGCAGCAGAAGTTCGTGTTTAACAAAACGTTGAATTTGTCTCCTTGTGACAGTAGGCTTGCTCTTACGAATGGAAATTCTCTGATCTCTATGTTTAGACCTATGGTTGATGAGATCTCCCTCCTCACCGTCAATACTACTCCCTCCGTGTCCAATTTCAATCCGTCTTCCAATAGCTATATGGTTGCATTTGCTGGACGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTCGCTGATGAACAACATGCCGTGACTAGCTTTACTCTGGTGCTCGAGTTCGAGAAGGGCAGGCTGCAAAACCTGTTCTGGAAAAGGGACGGTTGTGCTCAATGCTCAAACAACAACACCTTTGTATGCATCAACAATCAGGATTGTGCAATCAGAACAAGCAACTGCAAATATCGTGGCGGTCCTGTCGATTGCAGTCTTGCTATACAACTAGCATTCTCGGGCACCGATAAGCACCTTTCGGTTTTCAACTCTTGGTATGAAGTCTCAAGACTTCGCCAGTACTCGCTCTTCAATCTGTATTCAAATCTCAAAGATTCTCTCACTAGTCAGTACAACAAGATCTTCCAATAGAGCATAGCACATATATTTTGGTTAATGCATATTCCCATACATGTATGTTGTAATTCAGTTTAAGCATCAAATTCCTTTCATATCTTAAATGATTCCCCATACGCAGGGCTACCTTATATGTATACTAAAGAGTATTTCGGATACACAGTCGATCGGACTCTAATACTTATATAATTATAAGTTTGCACACGTGTGAAACCTTCGTTTTTTGAATCGATAAA

Coding sequence (CDS)

ATGGCGATTTACGATCTCTCAACGGCATCCGCCGTACTGCTTCTCCTAATGACGGCGGCGGCCGTTGAAGCTAGGGACAGCAACCGAGTTTTCTCTCCTTGCGCCGACACGACTGTTGAGAAGTCCGACGGTTTCACCTTAGGGCTTGCTTTTGCGACGCAGCAGAAGTTCGTGTTTAACAAAACGTTGAATTTGTCTCCTTGTGACAGTAGGCTTGCTCTTACGAATGGAAATTCTCTGATCTCTATGTTTAGACCTATGGTTGATGAGATCTCCCTCCTCACCGTCAATACTACTCCCTCCGTGTCCAATTTCAATCCGTCTTCCAATAGCTATATGGTTGCATTTGCTGGACGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTCGCTGATGAACAACATGCCGTGACTAGCTTTACTCTGGTGCTCGAGTTCGAGAAGGGCAGGCTGCAAAACCTGTTCTGGAAAAGGGACGGTTGTGCTCAATGCTCAAACAACAACACCTTTGTATGCATCAACAATCAGGATTGTGCAATCAGAACAAGCAACTGCAAATATCGTGGCGGTCCTGTCGATTGCAGTCTTGCTATACAACTAGCATTCTCGGGCACCGATAAGCACCTTTCGGTTTTCAACTCTTGGTATGAAGTCTCAAGACTTCGCCAGTACTCGCTCTTCAATCTGTATTCAAATCTCAAAGATTCTCTCACTAGTCAGTACAACAAGATCTTCCAATAG
Homology
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BLAST of CmoCh06G005360 vs. TrEMBL
Match: A0A0A0LGU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782730 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 2.2e-114
Identity = 209/245 (85.31%), Postives = 225/245 (91.84%), Query Frame = 1 

Query: 1   MAIYDLSTASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFN 60
           MAI  LS AS VL+LL+TA  +EA D+NRVFSPC DTTVE SDGFTLG AFAT+QKF FN
Sbjct: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60

Query: 61  KTLNLSPCDSRLALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSSNSYMVAFAGRK 120
           KTL LSPCDSRL LTNGNSLIS+FRP VDEISLLT+NT+ SVS+F+PSSN YMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180
           YAARSPPIFVAD+QH VTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180

Query: 181 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RT++CK  GG VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]
BLAST of CmoCh06G005360 vs. TrEMBL
Match: A0A061EVR7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_023045 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.7e-85
Identity = 162/242 (66.94%), Postives = 192/242 (79.34%), Query Frame = 1 

Query: 9   ASAVLLLLMTAAAV-----EARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFNKTL 68
           A+  LLLLMTAA        + D+N  ++PC+DT ++ SDGFT G+AFA++Q F FN +L
Sbjct: 5   AAYFLLLLMTAATAPLLVESSDDTNHAYTPCSDTKIQLSDGFTFGIAFASRQSFFFNSSL 64

Query: 69  NLSPCDSRLALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSS-NSYMVAFAGRKYA 128
            LSPCD RL+L+N NS +++FRP VDEISLLT+NT    S+F+P S   YMVAFAGRKYA
Sbjct: 65  QLSPCDRRLSLSNSNSRVALFRPKVDEISLLTINT----SSFSPDSVGGYMVAFAGRKYA 124

Query: 129 ARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAIRT 188
           ARS P FVA+  + VTSFTLVLEF+KGRLQNL+WKRDGCAQCS  + FVC+N QDCAI T
Sbjct: 125 ARSLPAFVANNTYTVTSFTLVLEFKKGRLQNLYWKRDGCAQCSGKSNFVCLNKQDCAIST 184

Query: 189 SNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYN 245
           +NCK  GG VDCSL IQLAFSGTDKHLSV NSWYEV  LRQYSL+ LYSNL+DSL+SQYN
Sbjct: 185 NNCKNHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLSSQYN 242

[Close]
BLAST of CmoCh06G005360 vs. TrEMBL
Match: A0A151RTP4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_032519 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 4.8e-85
Identity = 159/239 (66.53%), Postives = 193/239 (80.75%), Query Frame = 1 

Query: 9   ASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFNK--TLNLS 68
           A+ V+  L  A   +A D NRVFSPC+DT V++SDGFT G+AFA++ KF +N   +L LS
Sbjct: 9   AAIVVAALAAALLADAGDDNRVFSPCSDTHVQRSDGFTFGIAFASKDKFFYNNNNSLQLS 68

Query: 69  PCDSRLALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSSNSYMVAFAGRKYAARSP 128
           PCDSRL+L+N NS IS+FRP VDEISLLTVN+    S+F   +  YMVAFAGR+YAARSP
Sbjct: 69  PCDSRLSLSNSNSQISVFRPKVDEISLLTVNS----SSFTADTYGYMVAFAGRRYAARSP 128

Query: 129 PIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAIRTSNCK 188
           P FVA+  + VTSFTLVLEF+KGRLQNL+WKRDGC++CS N+  VC+NNQDCA++TS+CK
Sbjct: 129 PAFVANSTYTVTSFTLVLEFKKGRLQNLYWKRDGCSKCSGNSKAVCLNNQDCALQTSSCK 188

Query: 189 YRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
             GG VDCS+ IQLAFSGTDKHL+V NSWYEV  LRQYSL+ LYSNL+DSLTSQY+K F
Sbjct: 189 SHGGTVDCSIGIQLAFSGTDKHLAVLNSWYEVKNLRQYSLYGLYSNLRDSLTSQYDKFF 243

[Close]
BLAST of CmoCh06G005360 vs. TrEMBL
Match: A0A059A245_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01919 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 8.2e-85
Identity = 163/243 (67.08%), Postives = 193/243 (79.42%), Query Frame = 1 

Query: 9   ASAVLLLLMTA-----AAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFNKTL 68
           ASA+L L   A     AAV + D+N  +S CADTTV++SDGF+  +AFA +  F FN T 
Sbjct: 9   ASALLALAAAASPSWLAAVRSSDTNGAYSTCADTTVQRSDGFSFAIAFAARTAFFFNSTQ 68

Query: 69  NLSPCDSRLALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNP-SSNSYMVAFAGRKYA 128
            LSPCDSRL+L++  S I++FRP VDEISLLT+NT    S+F+P +S  YMVAFAGRKYA
Sbjct: 69  QLSPCDSRLSLSSSGSQIAVFRPKVDEISLLTINT----SSFSPDTSGGYMVAFAGRKYA 128

Query: 129 ARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAIRT 188
           ARS P FVA+  + VTSFTLVLEF+KGRLQNL+WKRDGC+ CS N+ FVC+NNQDCA++T
Sbjct: 129 ARSLPAFVANSTYTVTSFTLVLEFQKGRLQNLYWKRDGCSSCSGNSNFVCLNNQDCALKT 188

Query: 189 SNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYN 246
           S+CK RGG VDCSL IQLAFSGTDKH  V NSWYEV +LRQYSL+ LYSNLKDSLTSQYN
Sbjct: 189 SDCKNRGGSVDCSLGIQLAFSGTDKHFKVLNSWYEVEKLRQYSLYGLYSNLKDSLTSQYN 247

[Close]
BLAST of CmoCh06G005360 vs. TrEMBL
Match: A0A0B0MGL0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_37453 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 8.2e-85
Identity = 158/233 (67.81%), Postives = 185/233 (79.40%), Query Frame = 1 

Query: 14  LLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFNKTLNLSPCDSRLA 73
           LLLM  A   + D N  ++PC+DTTV+ SDGFT G+AF ++Q F F+ +  LSPCD RL+
Sbjct: 11  LLLMMTAVESSDDMNNAYTPCSDTTVQLSDGFTFGIAFGSRQSFFFDSSFQLSPCDRRLS 70

Query: 74  LTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSS-NSYMVAFAGRKYAARSPPIFVAD 133
           L+N NS +++FRP VDEISLLT+N    VS+F+P S   YMVAF+GRKYAARS P FVA+
Sbjct: 71  LSNSNSPVALFRPKVDEISLLTIN----VSSFSPDSVGGYMVAFSGRKYAARSLPAFVAN 130

Query: 134 EQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAIRTSNCKYRGGPV 193
             + VTSFTLVLEF+KGRLQNLFWKRDGCAQCS N+ FVC+N Q+CAI TS+CK  GG V
Sbjct: 131 SSYTVTSFTLVLEFKKGRLQNLFWKRDGCAQCSGNSNFVCLNKQNCAINTSSCKNHGGSV 190

Query: 194 DCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
           DCSL IQLAFSGTDKHLS  NSWYE   LRQYSLF LYSNL+DSLTSQYNKIF
Sbjct: 191 DCSLGIQLAFSGTDKHLSALNSWYEAENLRQYSLFGLYSNLRDSLTSQYNKIF 239

[Close]
BLAST of CmoCh06G005360 vs. TAIR10
Match: AT3G44150.1 (AT3G44150.1 unknown protein)

HSP 1 Score: 292.4 bits (747), Expect = 2.7e-79
Identity = 140/237 (59.07%), Postives = 181/237 (76.37%), Query Frame = 1 

Query: 9   ASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFNKTLNLSPC 68
           ++ +L + +   +  + ++N ++SPC+DT +++SDGFT G+AF+++  F  N+T+ LSPC
Sbjct: 13  SAVILTVALGGDSGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPC 72

Query: 69  DSRLALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSSNSYMVAFAGRKYAARSPPI 128
           D RL+L   NS  S+FRP +DEISLL++NT+   + F  +   YMVAFAGRKYAARS P 
Sbjct: 73  DRRLSLAAMNSQFSVFRPKIDEISLLSINTS---AFFPDNYGGYMVAFAGRKYAARSIPA 132

Query: 129 FVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAIRTSNCKYR 188
           F+A+    VTSFTLV+EF+KGRLQNL+WKRDGCA C  N  FVC+N QDCAIRT +CK R
Sbjct: 133 FIANSTFIVTSFTLVMEFQKGRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSCKGR 192

Query: 189 GGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
           GG VDCSL IQLAFSGTDKHL+V NSWYEV  L+QYSL+ LYSNLK SLT+Q+N  F
Sbjct: 193 GGAVDCSLGIQLAFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFNNFF 246

[Close]
BLAST of CmoCh06G005360 vs. TAIR10
Match: AT3G11800.1 (AT3G11800.1 unknown protein)

HSP 1 Score: 290.4 bits (742), Expect = 1.0e-78
Identity = 141/234 (60.26%), Postives = 182/234 (77.78%), Query Frame = 1 

Query: 16  LMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVF---NKTLNLSPCDSRL 75
           ++T++  EA D+N+V+SPC+D+TV   DGFT G+AFA +  F     +K++  SPCD R 
Sbjct: 14  VLTSSLTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRH 73

Query: 76  ALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNP-SSNSYMVAFAGRKYAARSPPIFVA 135
              NGNS +++FRP VDEI+LLT+NT+ S S+F P +S  YMVAFAG KYAARS PI VA
Sbjct: 74  LSLNGNSEVAVFRPKVDEITLLTINTSSS-SSFRPDASKGYMVAFAGAKYAARSLPIMVA 133

Query: 136 DEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAIRTSNCKYRGGP 195
           D  H VTSFTLVLEF+KGRL+N+FWK+DGC++CS ++ FVC+N ++CAI+  NCK +GG 
Sbjct: 134 DSNHIVTSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQ 193

Query: 196 VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
           VDCSL IQLAFSGTDKH +  NSWYEV+ L+QYSL+ LYSNLKDSLT+ +  IF
Sbjct: 194 VDCSLGIQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPFKNIF 246

[Close]
BLAST of CmoCh06G005360 vs. TAIR10
Match: AT2G15910.1 (AT2G15910.1 CSL zinc finger domain-containing protein)

HSP 1 Score: 225.3 bits (573), Expect = 4.0e-59
Identity = 117/239 (48.95%), Postives = 167/239 (69.87%), Query Frame = 1 

Query: 12  VLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFNKTLNLSPCDSR 71
           +++++M    V A D+N V+SPC+DT + K DGFT+G+A ++++ F  ++ + LSPCD+R
Sbjct: 130 MMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQ-VQLSPCDTR 189

Query: 72  LALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPS-SNSYMVAFAGRKYAARSPPIFV 131
           L L    + +++FRP VDEISLL+++T    S FNPS +  +MV FAG KYAARS P+ V
Sbjct: 190 LGLAAKMAQLALFRPKVDEISLLSIDT----SKFNPSEAGGFMVGFAGSKYAARSYPVKV 249

Query: 132 ADEQHAVTSFTLV---------LEFEKGRLQNLFWKRDGCAQC--SNNNTFVCINNQDCA 191
           AD  + +T+FTLV         LEF+KG LQNLFWK  GC  C  + +++ VC+N  DCA
Sbjct: 250 ADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCA 309

Query: 192 IRTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLT 239
           + TS CK  GG  +C++ IQ+AFSGTD++L   N+WYEV+ LRQYSL +LY+N  DSL+
Sbjct: 310 VPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLS 363

[Close]
BLAST of CmoCh06G005360 vs. TAIR10
Match: AT3G48630.1 (AT3G48630.1 unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09
Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 1 

Query: 112 YMVAFAGRKYAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQ 164
           Y V   G +  +   P F+A+    VTSFT V+EF+KGRLQNL+WKRD CA+
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK 53

[Close]
BLAST of CmoCh06G005360 vs. NCBI nr
Match: gi|659084531|ref|XP_008442938.1| (PREDICTED: uncharacterized protein LOC103486692 [Cucumis melo])

HSP 1 Score: 422.9 bits (1086), Expect = 3.7e-115
Identity = 214/245 (87.35%), Postives = 225/245 (91.84%), Query Frame = 1 

Query: 1   MAIYDLSTASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFN 60
           MAI   S ASAVL+LL+TA  VEA D+NRVFSPC DTTVE SDGFTLG AFATQQKF FN
Sbjct: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60

Query: 61  KTLNLSPCDSRLALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSSNSYMVAFAGRK 120
           KTL LSPCDSRL LTNGNSLIS+FRP VDEISLLTVNT+ SVS+F+PSSN YMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180
           YAARSPPIFVAD+QH VTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180

Query: 181 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RT++CK  GG VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]
BLAST of CmoCh06G005360 vs. NCBI nr
Match: gi|449437484|ref|XP_004136522.1| (PREDICTED: uncharacterized protein LOC101209667 [Cucumis sativus])

HSP 1 Score: 419.9 bits (1078), Expect = 3.2e-114
Identity = 209/245 (85.31%), Postives = 225/245 (91.84%), Query Frame = 1 

Query: 1   MAIYDLSTASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFN 60
           MAI  LS AS VL+LL+TA  +EA D+NRVFSPC DTTVE SDGFTLG AFAT+QKF FN
Sbjct: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60

Query: 61  KTLNLSPCDSRLALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSSNSYMVAFAGRK 120
           KTL LSPCDSRL LTNGNSLIS+FRP VDEISLLT+NT+ SVS+F+PSSN YMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180
           YAARSPPIFVAD+QH VTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180

Query: 181 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RT++CK  GG VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]
BLAST of CmoCh06G005360 vs. NCBI nr
Match: gi|743878329|ref|XP_011035616.1| (PREDICTED: uncharacterized protein LOC105133355 isoform X2 [Populus euphratica])

HSP 1 Score: 322.8 bits (826), Expect = 5.3e-85
Identity = 161/235 (68.51%), Postives = 189/235 (80.43%), Query Frame = 1 

Query: 12  VLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFNKTLNLSPCDSR 71
           V +   T   V++ ++N V+SPCADTTV+ SDGFT  +AF+++  F FN TL LSPCDSR
Sbjct: 16  VTITSSTILPVQSDNTNHVYSPCADTTVQVSDGFTFSIAFSSRTAFFFNSTLQLSPCDSR 75

Query: 72  LALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSS-NSYMVAFAGRKYAARSPPIFV 131
           L+LT+ NS IS+FRP VDEISLLT+NT    S+F+P +   YMVAFAGRKYAARS P FV
Sbjct: 76  LSLTSQNSQISVFRPKVDEISLLTINT----SSFSPQNYGGYMVAFAGRKYAARSLPAFV 135

Query: 132 ADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAIRTSNCKYRGG 191
           A+  + VTSFTLVLEF+KGRLQNL+WKRDGCA+CS N+ FVC+NNQDCAIRTS+CK  GG
Sbjct: 136 ANSTYTVTSFTLVLEFKKGRLQNLYWKRDGCAKCSGNSKFVCLNNQDCAIRTSSCKKNGG 195

Query: 192 PVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
            VDCSL IQLAFSGTDKH S  NSWYEV  LRQYSL+ LYSNL+DSLTSQYN IF
Sbjct: 196 SVDCSLGIQLAFSGTDKHFSALNSWYEVENLRQYSLYGLYSNLRDSLTSQYNSIF 246

[Close]
BLAST of CmoCh06G005360 vs. NCBI nr
Match: gi|590633066|ref|XP_007028015.1| (Uncharacterized protein TCM_023045 [Theobroma cacao])

HSP 1 Score: 322.8 bits (826), Expect = 5.3e-85
Identity = 162/242 (66.94%), Postives = 192/242 (79.34%), Query Frame = 1 

Query: 9   ASAVLLLLMTAAAV-----EARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFNKTL 68
           A+  LLLLMTAA        + D+N  ++PC+DT ++ SDGFT G+AFA++Q F FN +L
Sbjct: 5   AAYFLLLLMTAATAPLLVESSDDTNHAYTPCSDTKIQLSDGFTFGIAFASRQSFFFNSSL 64

Query: 69  NLSPCDSRLALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSS-NSYMVAFAGRKYA 128
            LSPCD RL+L+N NS +++FRP VDEISLLT+NT    S+F+P S   YMVAFAGRKYA
Sbjct: 65  QLSPCDRRLSLSNSNSRVALFRPKVDEISLLTINT----SSFSPDSVGGYMVAFAGRKYA 124

Query: 129 ARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAIRT 188
           ARS P FVA+  + VTSFTLVLEF+KGRLQNL+WKRDGCAQCS  + FVC+N QDCAI T
Sbjct: 125 ARSLPAFVANNTYTVTSFTLVLEFKKGRLQNLYWKRDGCAQCSGKSNFVCLNKQDCAIST 184

Query: 189 SNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYN 245
           +NCK  GG VDCSL IQLAFSGTDKHLSV NSWYEV  LRQYSL+ LYSNL+DSL+SQYN
Sbjct: 185 NNCKNHGGSVDCSLGIQLAFSGTDKHLSVLNSWYEVENLRQYSLYGLYSNLRDSLSSQYN 242

[Close]
BLAST of CmoCh06G005360 vs. NCBI nr
Match: gi|743906053|ref|XP_011046438.1| (PREDICTED: uncharacterized protein LOC105141047 [Populus euphratica])

HSP 1 Score: 322.8 bits (826), Expect = 5.3e-85
Identity = 161/235 (68.51%), Postives = 188/235 (80.00%), Query Frame = 1 

Query: 12  VLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFNKTLNLSPCDSR 71
           V +   T   V++ ++N V+SPCADTTV+ SDGFT  +AF+++  F FN TL LSPCDSR
Sbjct: 16  VTITSSTILPVQSDNTNHVYSPCADTTVQVSDGFTFSIAFSSRNAFFFNSTLQLSPCDSR 75

Query: 72  LALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSS-NSYMVAFAGRKYAARSPPIFV 131
           L+LT+ NS IS+FRP VDEISLLT+NT    S+F+P     YMVAFAGRKYAARS P FV
Sbjct: 76  LSLTSQNSQISVFRPKVDEISLLTINT----SSFSPGDYGGYMVAFAGRKYAARSLPAFV 135

Query: 132 ADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAIRTSNCKYRGG 191
           A+  + VTSFTLVLEF+KGRLQNL+WKRDGCA+CS N+ FVC+NNQDCAIRTS+CK  GG
Sbjct: 136 ANSTYTVTSFTLVLEFKKGRLQNLYWKRDGCAKCSGNSKFVCLNNQDCAIRTSSCKKNGG 195

Query: 192 PVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
            VDCSL IQLAFSGTDKH S  NSWYEV  LRQYSL+ LYSNL+DSLTSQYN IF
Sbjct: 196 SVDCSLGIQLAFSGTDKHFSALNSWYEVENLRQYSLYGLYSNLRDSLTSQYNSIF 246

The following BLAST results are available for this feature:
BLAST of CmoCh06G005360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh06G005360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGU1_CUCSA2.2e-11485.31Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782730 PE=4 SV=1[more]
A0A061EVR7_THECC3.7e-8566.94Uncharacterized protein OS=Theobroma cacao GN=TCM_023045 PE=4 SV=1[more]
A0A151RTP4_CAJCA4.8e-8566.53Uncharacterized protein OS=Cajanus cajan GN=KK1_032519 PE=4 SV=1[more]
A0A059A245_EUCGR8.2e-8567.08Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01919 PE=4 SV=1[more]
A0A0B0MGL0_GOSAR8.2e-8567.81Uncharacterized protein OS=Gossypium arboreum GN=F383_37453 PE=4 SV=1[more]
BLAST of CmoCh06G005360 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G44150.12.7e-7959.07 unknown protein[more]
AT3G11800.11.0e-7860.26 unknown protein[more]
AT2G15910.14.0e-5948.95 CSL zinc finger domain-containing protein[more]
AT3G48630.11.7e-0951.92 unknown protein[more]
BLAST of CmoCh06G005360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659084531|ref|XP_008442938.1|3.7e-11587.35PREDICTED: uncharacterized protein LOC103486692 [Cucumis melo][more]
gi|449437484|ref|XP_004136522.1|3.2e-11485.31PREDICTED: uncharacterized protein LOC101209667 [Cucumis sativus][more]
gi|743878329|ref|XP_011035616.1|5.3e-8568.51PREDICTED: uncharacterized protein LOC105133355 isoform X2 [Populus euphratica][more]
gi|590633066|ref|XP_007028015.1|5.3e-8566.94Uncharacterized protein TCM_023045 [Theobroma cacao][more]
gi|743906053|ref|XP_011046438.1|5.3e-8568.51PREDICTED: uncharacterized protein LOC105141047 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G005360.1CmoCh06G005360.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21454FAMILY NOT NAMEDcoord: 12..246
score: 5.7E
NoneNo IPR availablePANTHERPTHR21454:SF3SUBFAMILY NOT NAMEDcoord: 12..246
score: 5.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh06G005360Cucsa.242000Cucumber (Gy14) v1cgycmoB0681
CmoCh06G005360CmaCh14G003680Cucurbita maxima (Rimu)cmacmoB268
CmoCh06G005360CmaCh20G001430Cucurbita maxima (Rimu)cmacmoB570
CmoCh06G005360CmaCh06G005340Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G005360Cla008615Watermelon (97103) v1cmowmB799
CmoCh06G005360Cla017610Watermelon (97103) v1cmowmB782
CmoCh06G005360Csa3G782730Cucumber (Chinese Long) v2cmocuB808
CmoCh06G005360Csa6G426900Cucumber (Chinese Long) v2cmocuB832
CmoCh06G005360MELO3C009553Melon (DHL92) v3.5.1cmomeB747
CmoCh06G005360MELO3C014523Melon (DHL92) v3.5.1cmomeB754
CmoCh06G005360ClCG10G018190Watermelon (Charleston Gray)cmowcgB729
CmoCh06G005360ClCG02G022470Watermelon (Charleston Gray)cmowcgB739
CmoCh06G005360CSPI06G23460Wild cucumber (PI 183967)cmocpiB842
CmoCh06G005360CSPI03G35760Wild cucumber (PI 183967)cmocpiB816
CmoCh06G005360Lsi03G018070Bottle gourd (USVL1VR-Ls)cmolsiB747
CmoCh06G005360Lsi10G011330Bottle gourd (USVL1VR-Ls)cmolsiB737
CmoCh06G005360Cp4.1LG16g08270Cucurbita pepo (Zucchini)cmocpeB774
CmoCh06G005360Cp4.1LG03g00330Cucurbita pepo (Zucchini)cmocpeB783
CmoCh06G005360Cp4.1LG08g09590Cucurbita pepo (Zucchini)cmocpeB797
CmoCh06G005360MELO3C009553.2Melon (DHL92) v3.6.1cmomedB849
CmoCh06G005360MELO3C014523.2Melon (DHL92) v3.6.1cmomedB856
CmoCh06G005360CsaV3_6G038610Cucumber (Chinese Long) v3cmocucB0982
CmoCh06G005360CsaV3_3G038120Cucumber (Chinese Long) v3cmocucB0954
CmoCh06G005360Cla97C02G048550Watermelon (97103) v2cmowmbB827
CmoCh06G005360Cla97C10G201160Watermelon (97103) v2cmowmbB818
CmoCh06G005360Bhi10G000151Wax gourdcmowgoB1025
CmoCh06G005360Bhi11G002037Wax gourdcmowgoB0974
CmoCh06G005360CsGy6G022770Cucumber (Gy14) v2cgybcmoB837
CmoCh06G005360CsGy3G033230Cucumber (Gy14) v2cgybcmoB402
CmoCh06G005360Carg16225Silver-seed gourdcarcmoB0933
CmoCh06G005360Carg18405Silver-seed gourdcarcmoB0562
CmoCh06G005360Carg03616Silver-seed gourdcarcmoB0351
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh06G005360CmoCh14G003680Cucurbita moschata (Rifu)cmocmoB222
CmoCh06G005360CmoCh20G001590Cucurbita moschata (Rifu)cmocmoB423
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G005360Silver-seed gourdcarcmoB1239