Carg00300 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00300
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Chitin synthase, putative (DUF1218)
Location	Cucurbita_argyrosperma_scaffold_001 : 1661082 .. 1663048 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAGCCACCATCCAGCTTCTTCGTGATAGGGTTTTCCATTGTTGCAACCCTCACCCTCGCCTCCTTCGCGTCATGTATGGCTGCTGAATTCAACAGAACAAGTGTAAGTTTCTTCTTTCACTTTCTTTCTCATTTACAGTATTGATTTTTCATACAAAAATTTCCTGAATCATCGAAATCGAAATATGTGGCAGAAAAAGGACCTGAAATTGAACGGCAGATTCTGCTTTCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTCGCAGGTTTGATCTGTTTAATAATGGCTCAAATCATTGGAAACACTATAATCTGCCATAGCTATTGGCCAAAGGAGAATAGAAAGAGTTGCAGTGTCAAAAGGCCTCTCCTTTCAACCACCCTTCTCATCTCTTGGTCAGTAATTATTTCTTCATATAAATCTTCATTTTTTTCTGTATTTTTTTCAGTTTATCTGGGGATTAAGAAAATGAAACTAACAATAGTAACAAAAAATAAATAAATAAAAACAAAAACAAAAACCTGAAAGTATAATTTTTTTTTTTTTTTTCTTTTTTGGCAATTTCCAAGTTGTGAAGATCCACATATGAATTTAAAAATGAATAGCAGTAACCTGAATTCAAGATCGTTTTGATTTTTTTTTTTTTTTGCAAGATCAAGTAAACTACAAAATAGCATTATTATTAATACTAAAATGATAATAATATATGAGAATTATTTGAAGGATAAAGTAATTTCCTTTGTTCCGGGCATATATTGTTAAGAAAAAACATATAGTACTTATTGTATCATTTAGTCTCCAATATTTTGGTGCTAAATCAATTTCAACATTCATCATCAACAAGAAGACCAAAAAATAATCCAAACATAAGAGAACACTCCTCAATTAAAGTATTTAATAGCTTTTTTTTTAAAATTTAACAGATTCACGAGTTTTAAAATTTGTGTTCAATAACTAATTAAAATAAAATAAAATAACAAAAAAAAAAATATTCATAGACCAACTAAACACAAAATTAAAAATTTAGATTCACCTCGTTTATAAAAACTAATATGGTATACAATAGATCAATTAACTTTTAAAAATTTTGATAGACATAAAATTGAAAATTTAGAATCTACTAGACATTTTAAAATTAGTAAACCTGTTAAACACAAAATTAAAAGCATTTTCTAAAGTTAAAAAAATTAAAGGACTAAACTATAATTTAACCTCTATTTACCAGGAAAATGAAATAAAGAAAAAATATCATTTTGATCCTTAAATTTTTTTTATTAGCTTCAATTTAGTCCCTAAATTTTAAAATATTATTTTACTTGGAGTTTAGTTGTAATTGAATCCTTAAGTTGTGAGATCCTACCTTTGTACCTTTTGAGTTAATAACTTATCGTTTACTTTTGGACTTTGGTATTTGGTATTGATTTAATTAATTAAATATTATGATGTATAATTTTTTTTAATTAATTGAAATAGTGATAATAATTAAACTAATTAATAAAAAATTAACATAAATTATCAAAAGTGATCAGTAATAAAAATTGAAGATAAGTATGTAAAACTTTGAAAGATAGGAACGAAATGAAAACCAAGCTCAAGAAAAAAAATATAAGATCAGATGAAATCTATAAAAAAAATAATAATAATAATAATAAAATAAAAAATAAAAAACTGAATGGCAAGAAATAATAAAAAAAAAAGGCTAAAATAGTAAATAAAATGAAATACCAGGGCCAGCTTTGGAATTGCGGTGGTAATGATGAGTGGAGCCATCAGCATGAGCAGCAGACAAGAGTATGGGAAGGGGTGGGTGGAAGGAGAATGCTATGTGGTGAAAGACCGAATATTTGTTGGCGCGGCCCTATTGATTCTCATTAATGGGGCCTCCACCATATTCTCCGCCGCCATTGCAAGGAAGAGCCACCCTAAAGGGCCCACTCAAATAAATTCACAAATTAGATAA

mRNA sequence

ATGGAAAAGCCACCATCCAGCTTCTTCGTGATAGGGTTTTCCATTGTTGCAACCCTCACCCTCGCCTCCTTCGCGTCATGTATGGCTGCTGAATTCAACAGAACAAGTAAAAAGGACCTGAAATTGAACGGCAGATTCTGCTTTCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTCGCAGCTATTGGCCAAAGGAGAATAGAAAGAGTTGCAGTGTCAAAAGGCCTCTCCTTTCAACCACCCTTCTCATCTCTTGGTCAGGCCAGCTTTGGAATTGCGGTGGTAATGATGAGTGGAGCCATCAGCATGAGCAGCAGACAAGAGTATGGGAAGGGGTGGGTGGAAGGAGAATGCTATGTGGTGAAAGACCGAATATTTGTTGGCGCGGCCCTATTGATTCTCATTAATGGGGCCTCCACCATATTCTCCGCCGCCATTGCAAGGAAGAGCCACCCTAAAGGGCCCACTCAAATAAATTCACAAATTAGATAA

Coding sequence (CDS)

ATGGAAAAGCCACCATCCAGCTTCTTCGTGATAGGGTTTTCCATTGTTGCAACCCTCACCCTCGCCTCCTTCGCGTCATGTATGGCTGCTGAATTCAACAGAACAAGTAAAAAGGACCTGAAATTGAACGGCAGATTCTGCTTTCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTCGCAGCTATTGGCCAAAGGAGAATAGAAAGAGTTGCAGTGTCAAAAGGCCTCTCCTTTCAACCACCCTTCTCATCTCTTGGTCAGGCCAGCTTTGGAATTGCGGTGGTAATGATGAGTGGAGCCATCAGCATGAGCAGCAGACAAGAGTATGGGAAGGGGTGGGTGGAAGGAGAATGCTATGTGGTGAAAGACCGAATATTTGTTGGCGCGGCCCTATTGATTCTCATTAATGGGGCCTCCACCATATTCTCCGCCGCCATTGCAAGGAAGAGCCACCCTAAAGGGCCCACTCAAATAAATTCACAAATTAGATAA

Protein sequence

MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVSKGLSFQPPFSSLGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR

Homology

[Close]

BLAST of Carg00300 vs. NCBI nr
Match: XP_022940987.1 (uncharacterized protein LOC111446405 [Cucurbita moschata] >XP_022940988.1 uncharacterized protein LOC111446405 [Cucurbita moschata])

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 137/180 (76.11%), Postives = 145/180 (80.56%), Query Frame = 0


Query: 1   MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVA 60
           MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVA
Sbjct: 1   MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVA 60

Query: 61  AIGQRRIERVAVS-------------KGLSFQPPFSS----LGQASFGIAVVMMSGAISM 120
            +    + ++  +             K  S + P  S    +  ASFGIAVVMMSGAISM
Sbjct: 61  GLICLIMAQIIGNTIICHSYWPKENRKSCSVKRPLLSTTLLISWASFGIAVVMMSGAISM 120

Query: 121 SSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR 164
           SSRQEYGKGWVEGECYVVKDRIFVGAALL+LINGASTI SAAI RKSHPKGPTQINSQIR
Sbjct: 121 SSRQEYGKGWVEGECYVVKDRIFVGAALLVLINGASTISSAAIGRKSHPKGPTQINSQIR 180

[Close]

BLAST of Carg00300 vs. NCBI nr
Match: XP_022937014.1 (uncharacterized protein LOC111443438 [Cucurbita moschata])

HSP 1 Score: 206.8 bits (525), Expect = 5.4e-50
Identity = 117/180 (65.00%), Postives = 129/180 (71.67%), Query Frame = 0


Query: 1   MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVA 60
           MEKPPSS FVI FSIVA LTLASFASCMAAEFNRT KKDLKLNGRFCFLPESEAFKLGVA
Sbjct: 1   MEKPPSS-FVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVA 60

Query: 61  AIGQRRIERVAVS-------------KGLSFQPPFSS----LGQASFGIAVVMMSGAISM 120
            I    +  +  +             K  S + P  S    +   SFGIAV MM GA SM
Sbjct: 61  GIVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLISWVSFGIAVAMMMGATSM 120

Query: 121 SSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR 164
           S RQEYGKGWVEGECY+VKD +FVGAALL+LING STI SAAI R+   KGP Q+++QIR
Sbjct: 121 SRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRRRRAKGPNQVHAQIR 179

[Close]

BLAST of Carg00300 vs. NCBI nr
Match: XP_023535227.1 (uncharacterized protein LOC111796718 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.9 bits (520), Expect = 2.1e-49
Identity = 116/179 (64.80%), Postives = 128/179 (71.51%), Query Frame = 0


Query: 1   MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVA 60
           MEKPPSS FVI FSIVA LTLASFASCMAAEFNRT KKDLKLNGRFCFLPESEAFKLGVA
Sbjct: 1   MEKPPSS-FVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVA 60

Query: 61  AIGQRRIERVAVS-------------KGLSFQPPFSS----LGQASFGIAVVMMSGAISM 120
            I    +  +  +             K  S + P  S    +   SFGIAV MM GA SM
Sbjct: 61  GIVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLISWVSFGIAVAMMMGATSM 120

Query: 121 SSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQI 163
           S RQEYGKGWVEGECY+VKD +FVGAALL+LING STI SAAI R+   KGP Q+++QI
Sbjct: 121 SRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRRRRAKGPNQVHAQI 178

[Close]

BLAST of Carg00300 vs. NCBI nr
Match: XP_022976861.1 (uncharacterized protein LOC111477105 [Cucurbita maxima])

HSP 1 Score: 202.6 bits (514), Expect = 1.0e-48
Identity = 114/179 (63.69%), Postives = 128/179 (71.51%), Query Frame = 0


Query: 1   MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVA 60
           ME PPSS FVI FSIVA LTLASFASCMAAEFNRT KKDLKLNGRFCFLPESEAFKLGVA
Sbjct: 1   MENPPSS-FVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVA 60

Query: 61  AIGQRRIERVAVS-------------KGLSFQPPFSS---LGQASFGIAVVMMSGAISMS 120
            I    +  +  +             K  S + P  +   +   SFGIAV M+ GA SMS
Sbjct: 61  GIVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLTTLLISWVSFGIAVAMIMGATSMS 120

Query: 121 SRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR 164
            RQEYGKGWVEGECY+VKD +FVGAALL+LING STI SAAI R+   KGP Q+++QIR
Sbjct: 121 RRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRRRRAKGPNQVHAQIR 178

[Close]

BLAST of Carg00300 vs. NCBI nr
Match: XP_022139149.1 (uncharacterized protein LOC111010123 isoform X1 [Momordica charantia])

HSP 1 Score: 200.7 bits (509), Expect = 3.9e-48
Identity = 115/179 (64.25%), Postives = 129/179 (72.07%), Query Frame = 0


Query: 1   MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVA 60
           MEK PS  F I FSIVA LTL SFASCMAAEFNRT KKDLKL+GRFCFLPESEAFKLGVA
Sbjct: 1   MEKHPSG-FAISFSIVAFLTLVSFASCMAAEFNRTKKKDLKLSGRFCFLPESEAFKLGVA 60

Query: 61  AIGQRRIERVAVS-------------KGLSFQPPFSS----LGQASFGIAVVMMSGAISM 120
           ++    + ++  +             K  S + P  S    +   SFGIAV MMSGA SM
Sbjct: 61  SLVCLVMAQIIGNTIICHSYWPKEKRKSCSVKRPLLSTTLLISWVSFGIAVAMMSGATSM 120

Query: 121 SSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQI 163
           S RQEYGKGWVEGECYVVKD IFVGAALL+LING STI SAAI R+SH  GP+QI++QI
Sbjct: 121 SRRQEYGKGWVEGECYVVKDGIFVGAALLVLINGGSTIGSAAIGRRSHVTGPSQIHAQI 178

[Close]

BLAST of Carg00300 vs. TAIR10
Match: AT4G19370.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 56/158 (35.44%), Postives = 86/158 (54.43%), Query Frame = 0


Query: 13  FSIVATLTLASFASCMAAEFNRTSKKDLKLN-GRFCFLPESEAFKLGVAAI--------- 72
           +S+V +L L SF +C AAEF RT K+D++ +  R C++P S AF LG AA+         
Sbjct: 7   YSVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIV 66

Query: 73  --------GQRRIERVAVSK--GLSFQPPFSSLGQASFGIAVVMMSGAISMSSRQEYGKG 132
                    + R +R    K   L+       L  ++F + V+++S AISMS  Q YG+G
Sbjct: 67  GNIVVFRNHRTRTKREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAYGEG 126

Query: 133 WVEGECYVVKDRIFVGAALLILIN-GASTIFSAAIARK 150
           W++ +CY+VKD +F  +  L ++  GA TI +  I  K
Sbjct: 127 WLDEDCYLVKDGVFAASGCLAILGLGALTISATRIKVK 164

[Close]

BLAST of Carg00300 vs. TAIR10
Match: AT1G31720.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14
Identity = 56/182 (30.77%), Postives = 86/182 (47.25%), Query Frame = 0


Query: 5   PSSFFVIGFSIVATLTLASFASCMAAEFNRTSK----------KDLKLNGRFCFLPESEA 64
           P SF  + F  +    LA+F  C++AEF +             KDLK +G  C+LPE+ A
Sbjct: 13  PKSF--LFFMFIFLFGLAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRA 72

Query: 65  FKLGVAAI----GQRRIERVAVSKGLS---------FQPPFSSLGQASFGIAVVMMSGAI 124
           F LG+AA+      + +  V + +G +         F          +F +AV ++S   
Sbjct: 73  FGLGIAALVCVSVAQIVGNVVICRGFTKTDKTRTTIFCIILLLFSWVNFAVAVTLISVGA 132

Query: 125 SMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARK------SHPKGP 158
           SM+  Q YGKGW+  ECY+VKD +F  +  L +   A+ + + A   K      +H K  
Sbjct: 133 SMNREQIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGAFAFKVKPSLQVENHDKRH 192

[Close]

BLAST of Carg00300 vs. TrEMBL
Match: tr|A0A1S3B9G0|A0A1S3B9G0_CUCME (uncharacterized protein LOC103487629 OS=Cucumis melo OX=3656 GN=LOC103487629 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 7.7e-45
Identity = 109/182 (59.89%), Postives = 126/182 (69.23%), Query Frame = 0


Query: 1   MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVA 60
           MEKP SS FVI FSIVA LTLASFASC+AAEFNRT K+DLKLNG+FCFLPESEAFKLG+ 
Sbjct: 1   MEKPSSSSFVISFSIVAILTLASFASCLAAEFNRTKKEDLKLNGKFCFLPESEAFKLGIG 60

Query: 61  AIGQRRIERVAVS-------------KGLSFQPPFSS----LGQASFGIAVVMMSGAISM 120
            +    + ++  S             K  S + P  S    +   SF IAV+MMSGA SM
Sbjct: 61  GLVCLIMAQIIGSTLIYHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMMSGATSM 120

Query: 121 SSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSH---PKGPTQINS 163
           S RQEY +GWVEGECY+VKD IFVGAALL+LING STI SAAI R+      K P QI++
Sbjct: 121 SRRQEYARGWVEGECYLVKDGIFVGAALLVLINGGSTIGSAAIGRRRRNHVVKAPNQIHA 180

[Close]

BLAST of Carg00300 vs. TrEMBL
Match: tr|A0A0A0L099|A0A0A0L099_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G247410 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.1e-38
Identity = 99/176 (56.25%), Postives = 118/176 (67.05%), Query Frame = 0


Query: 9   FVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIE 68
           FVI FS+VA LTLASFASCMAAEFNRT K+DLKLN + CFLPESEAFKLG+  +    + 
Sbjct: 64  FVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIGGLLCLIMA 123

Query: 69  RVAVS-------------KGLSFQPPFSS----LGQASFGIAVVMMSGAISMSSRQEYGK 128
           ++  +             K  S + P  S    +   SF IAV+M+SGA SMS RQEY K
Sbjct: 124 QIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMVSGATSMSRRQEYAK 183

Query: 129 GWVEGECYVVKDRIFVGAALLILINGASTIFSAAIA----RKSHP-KGPTQINSQI 163
           GWVEGECY+VKD IFV AA+L+LING STI SAAI     R +H  K P QI++QI
Sbjct: 184 GWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQIHAQI 239

[Close]

BLAST of Carg00300 vs. TrEMBL
Match: tr|A0A2R6Q3J7|A0A2R6Q3J7_ACTCH (Glutamate receptor 3.1 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc22639 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.9e-25
Identity = 65/160 (40.62%), Postives = 96/160 (60.00%), Query Frame = 0


Query: 8   FFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAI----G 67
           +F +  S+V  L + SFA C+A+EF RT +KDLKL+GR C+LP S AF LG+AA+     
Sbjct: 7   WFTLILSVVTALGIVSFALCIASEFKRTKRKDLKLDGRLCYLPGSRAFGLGIAALICLSA 66

Query: 68  QRRIERVAVSKGL--------------SFQPPFSSLGQASFGIAVVMMSGAISMSSRQEY 127
            + I    + K L              +    F  L   SFG+AV+++S A SM+ +Q Y
Sbjct: 67  AQIIGNFVICKSLCLRERRTSCKAKKTTIASTFLVLSWVSFGVAVILISVATSMNRKQPY 126

Query: 128 GKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARK 150
           G+GW++GECY+VKD ++ GA +L+L+   ST+ SA I  +
Sbjct: 127 GEGWLDGECYIVKDGVYGGAGMLVLVTAGSTLASAIITTR 166

[Close]

BLAST of Carg00300 vs. TrEMBL
Match: tr|A0A2I4FRH1|A0A2I4FRH1_9ROSI (uncharacterized protein LOC109001429 isoform X1 OS=Juglans regia OX=51240 GN=LOC109001429 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.4e-24
Identity = 72/159 (45.28%), Postives = 96/159 (60.38%), Query Frame = 0


Query: 9   FVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAI------ 68
           FV  FSI+ +L L SF SC+AAE  RT   DLKLNG+ C LP S AF  G+AA+      
Sbjct: 8   FVFIFSIILSLGLVSFLSCIAAELKRTKLVDLKLNGKLCSLPGSHAFGFGIAALLCLLVA 67

Query: 69  ---GQRRIERVAVSKGLSFQPPFSSLGQA---------SFGIAVVMMSGAISMSSRQEYG 128
              G   I R A S+         + G A         SFGIAV+++SGA+SMS RQ YG
Sbjct: 68  QIMGNLIICRNACSREKRGSCKARAPGIAKILLFISWMSFGIAVILISGAMSMSRRQPYG 127

Query: 129 KGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARK 150
           KGW++GECY+VK+  ++G+A+L+L+   ST+ SA  A +
Sbjct: 128 KGWLDGECYIVKEGTYIGSAILVLVTIGSTLGSAFTANR 166

[Close]

BLAST of Carg00300 vs. TrEMBL
Match: tr|A0A2P5D705|A0A2P5D705_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_091140 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.7e-23
Identity = 69/176 (39.20%), Postives = 100/176 (56.82%), Query Frame = 0


Query: 1   MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVA 60
           MEK    +  I + +V +L L S ASC+AAE  R   KDLKL+G  C+LPES AF LG+A
Sbjct: 1   MEKRQHGYLSILYILVTSLGLFSVASCVAAELKRAKIKDLKLDGGLCYLPESRAFGLGIA 60

Query: 61  AIGQRRIERVA-----------VSKGLSFQPPFSSL----GQASFGIAVVMMSGAISMSS 120
           A+    I ++             S   +  P  S+L       SFG+AV+++  A SMS 
Sbjct: 61  ALICLCIAQIVGNLVFWRSGEKTSSCKAKTPMISTLLLFISWISFGVAVILLGSATSMSR 120

Query: 121 RQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQ 162
           RQ YGKGW++GECY+VKD +F+G+A+L+L+     +  +A   K   +  TQ+  +
Sbjct: 121 RQPYGKGWLDGECYLVKDGVFIGSAILVLL-ALGAMLGSAFTTKRRRRRKTQVEQE 175

The following BLAST results are available for this feature:

BLAST of Carg00300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940987.1	2.1e-62	76.11	uncharacterized protein LOC111446405 [Cucurbita moschata] >XP_022940988.1 unchar...	[more]
XP_022937014.1	5.4e-50	65.00	uncharacterized protein LOC111443438 [Cucurbita moschata]	[more]
XP_023535227.1	2.1e-49	64.80	uncharacterized protein LOC111796718 [Cucurbita pepo subsp. pepo]	[more]
XP_022976861.1	1.0e-48	63.69	uncharacterized protein LOC111477105 [Cucurbita maxima]	[more]
XP_022139149.1	3.9e-48	64.25	uncharacterized protein LOC111010123 isoform X1 [Momordica charantia]	[more]

BLAST of Carg00300 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19370.1	1.6e-16	35.44	Protein of unknown function (DUF1218)	[more]
AT1G31720.1	1.5e-14	30.77	Protein of unknown function (DUF1218)	[more]

BLAST of Carg00300 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg00300 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B9G0\|A0A1S3B9G0_CUCME	7.7e-45	59.89	uncharacterized protein LOC103487629 OS=Cucumis melo OX=3656 GN=LOC103487629 PE=...	[more]
tr\|A0A0A0L099\|A0A0A0L099_CUCSA	4.1e-38	56.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G247410 PE=4 SV=1	[more]
tr\|A0A2R6Q3J7\|A0A2R6Q3J7_ACTCH	8.9e-25	40.63	Glutamate receptor 3.1 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=...	[more]
tr\|A0A2I4FRH1\|A0A2I4FRH1_9ROSI	3.4e-24	45.28	uncharacterized protein LOC109001429 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2P5D705\|A0A2P5D705_PARAD	1.7e-23	39.20	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_091140 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009606	DUF1218

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00300-RA	Carg00300-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Protein of unknown function DUF1218	PFAM	PF06749	DUF1218	coord: 89..136 e-value: 1.3E-6 score: 28.7
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 6..62 coord: 88..152
None	No IPR available	PANTHER	PTHR31769:SF6	SUBFAMILY NOT NAMED	coord: 6..62 coord: 88..152
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..27 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00300	Csa4G247410	Cucumber (Chinese Long) v2	carcuB0690
Carg00300	ClCG11G016110	Watermelon (Charleston Gray)	carwcgB0647
Carg00300	CSPI04G12260	Wild cucumber (PI 183967)	carcpiB0702
Carg00300	CmaCh01G013550	Cucurbita maxima (Rimu)	carcmaB0947
Carg00300	CmoCh09G007510	Cucurbita moschata (Rifu)	carcmoB0906
Carg00300	Lsi04G018480	Bottle gourd (USVL1VR-Ls)	carlsiB612
Carg00300	Cp4.1LG06g05870	Cucurbita pepo (Zucchini)	carcpeB0947
Carg00300	CsGy4G011350	Cucumber (Gy14) v2	carcgybB0665
Carg00300	MELO3C032605.2	Melon (DHL92) v3.6.1	carmedB0685
Carg00300	Bhi09G002288	Wax gourd	carwgoB0789

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00300	Carg20076	Silver-seed gourd	carcarB574

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00300	Cucurbita maxima (Rimu)	carcmaB0932
Carg00300	Cucurbita moschata (Rifu)	carcmoB0922
Carg00300	Cucurbita pepo (Zucchini)	carcpeB0943
Carg00300	Cucumber (Chinese Long) v3	carcucB0703
Carg00300	Melon (DHL92) v3.5.1	carmeB0673
Carg00300	Watermelon (97103) v1	carwmB0672
Carg00300	Watermelon (97103) v2	carwmbB0692