CmoCh09G007510 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh09G007510
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transmembrane protein, putative
Location	Cmo_Chr09 : 3794935 .. 3796919 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTCCAATTGAGATTTTATTATCTTCTTCCAATTTTTTGTTGGAAAATTCTCTCTTTCTCTCTCTCCCTCTCTCTCTCTCCCCCTTCCCTCGTATTTGACCAGTGATGAAGATGAAAAACGAGAGATTTGATTCGAAAAAAGTCTCGACTTTCACAAGTCAAGAGAGAAAATGATGAATTTTCCACCACTAACCTCCAAGGGTCTTGTCCCGTGATTTAAACTCCCACTGCTTCTTCGATCTTCTGGCCGCCATGGAAAAGCCTCCTTCCAGTTTCGTGATAAGCTTTTCCATTGTCGCCGTCCTCACCCTCGCCTCCTTTGCATCATGTATGGCTGCTGAATTCAACAGAACAAAAGTAAGTTTCTTTCAATTTCTTTCCCATTTACAATATTAATTCTTCGTACAAATTAAAGCTTCCTCGAACATCATAATCGGAATCTATTGTAGAAAAAGGACCTGAAGTTGAACGGTAGATTCTGCTTCCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTCGCAGGTATTGTCTGTTTAATAATGGCTCATATCATCGGAAACACCATAATCTGCCACACCTATTGGCCAAAAGAGCACAGAAAGAGTTGCAGTGTCAAAAGGCCTCTGCTTTCAACCACCCTTCTCATTTCTTGGTAAGTAATTGTTTTTTCACAATAATCTTCTTCTTTCTTTCCTTTTTTTTCTGTATTTCTCAGTTCATTTGGGGAAATTTTGGTAGTAACAGTAACCCTTTTTGGTATTTATTGTTACTGTGCCCAAATTTTTAGACAACTTTCAGAAAAAAAAGTTAGAGAAATTCAATTAATGAATTATAAAAGGAATAGCAGAGCTGGTCATCGGAGGGAGAGAGGAAACTAAAAAGATAATATGCTAAAGGAACGTGGCCAGCTTTGAGGTGTTTCGGATTCCTATACATGGGATCCATGATCTAATTAATTACTAGACAACAATATTATTATTAATAAAACAATTATAGTACGAGAGAATTATTTCAAGAATAAAGTAATATTTTCAAAAAAGAAAGGCATACAGTAATTTTAAAACTTACCTTACAACCATAACCATTCTTTAAATAGTGGTAAAAGTAAAACGAAAAGAAGTCTTTTCGTTCAGCCTTTTATGTTTTAATATTTTCAATGTGTCCTTCCATGAATGTCAAAATTAATTAATGTAAGCTTATAAGAAAAACGATTCTTAGCAAGTTGCATACATATAAATTAAAGCACTTAAAAGAATCTTAGAAAAAGGGATTATAAATTTTCTTCTCTCAGCTAGTATAATTTTTCTAATAATTCTTTCCTAAGTTTCAACTCAACCTATCTTATATAAGTTTATAATCAACCAATTTCAACTATCTAACTGAAAACTGAAAAATGTAACGAACATTGAAGAATAAATTAAAAAAAGTTCTAATATGGAATAAATTTAAAACGCCCTTCAATATTAAAGCATATATTTAGGTAAAAAAATTAATAAACAGAGGCTAAAATGGTAAATAAAATGAAATACCAGGGTCAGCTTCGGAATTGCGGTGGCGATGATGATGGGAGCAACCAGCATGAGCAGGAGACAGGAGTATGGGAAGGGGTGGGTGGAAGGAGAATGCTATTTGGTCAAAGACGGAGTATTTGTTGGCGCGGCCCTCTTGGTTCTCATTAATGGAGGGTCCACCATAGGTTCGGCTGCCATTGGAAGGAGGCGGCGCGCTAAAGGGCCCAATCAAGTACATGCACAAATTAGATAACAAGACTGGTTATACATCATCAAAATATTTCCCTTCTTTTTTCTTTTTTGCATTTATTGTATGATGAATAATGAAAATGCCTCATATTCCCACTTATAGTTCTTAATTTATTTTTCTTGTCCTAATTTGTATAGTACCCCCAGAAACAAATAATTCATGGCTTGAAATCTCCATCCCAAAATTAAAATGTACCATTATCCATATATTAATAATATCCTAT

mRNA sequence

TCGTCCAATTGAGATTTTATTATCTTCTTCCAATTTTTTGTTGGAAAATTCTCTCTTTCTCTCTCTCCCTCTCTCTCTCTCCCCCTTCCCTCGTATTTGACCAGTGATGAAGATGAAAAACGAGAGATTTGATTCGAAAAAAGTCTCGACTTTCACAAGTCAAGAGAGAAAATGATGAATTTTCCACCACTAACCTCCAAGGGTCTTGTCCCGTGATTTAAACTCCCACTGCTTCTTCGATCTTCTGGCCGCCATGGAAAAGCCTCCTTCCAGTTTCGTGATAAGCTTTTCCATTGTCGCCGTCCTCACCCTCGCCTCCTTTGCATCATGTATGGCTGCTGAATTCAACAGAACAAAAAAAAAGGACCTGAAGTTGAACGGTAGATTCTGCTTCCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTCGCAGGTATTGTCTGTTTAATAATGGCTCATATCATCGGAAACACCATAATCTGCCACACCTATTGGCCAAAAGAGCACAGAAAGAGTTGCAGTGTCAAAAGGCCTCTGCTTTCAACCACCCTTCTCATTTCTTGGGTCAGCTTCGGAATTGCGGTGGCGATGATGATGGGAGCAACCAGCATGAGCAGGAGACAGGAGTATGGGAAGGGGTGGGTGGAAGGAGAATGCTATTTGGTCAAAGACGGAGTATTTGTTGGCGCGGCCCTCTTGGTTCTCATTAATGGAGGGTCCACCATAGGTTCGGCTGCCATTGGAAGGAGGCGGCGCGCTAAAGGGCCCAATCAAGTACATGCACAAATTAGATAACAAGACTGGTTATACATCATCAAAATATTTCCCTTCTTTTTTCTTTTTTGCATTTATTGTATGATGAATAATGAAAATGCCTCATATTCCCACTTATAGTTCTTAATTTATTTTTCTTGTCCTAATTTGTATAGTACCCCCAGAAACAAATAATTCATGGCTTGAAATCTCCATCCCAAAATTAAAATGTACCATTATCCATATATTAATAATATCCTAT

Coding sequence (CDS)

ATGGAAAAGCCTCCTTCCAGTTTCGTGATAAGCTTTTCCATTGTCGCCGTCCTCACCCTCGCCTCCTTTGCATCATGTATGGCTGCTGAATTCAACAGAACAAAAAAAAAGGACCTGAAGTTGAACGGTAGATTCTGCTTCCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTCGCAGGTATTGTCTGTTTAATAATGGCTCATATCATCGGAAACACCATAATCTGCCACACCTATTGGCCAAAAGAGCACAGAAAGAGTTGCAGTGTCAAAAGGCCTCTGCTTTCAACCACCCTTCTCATTTCTTGGGTCAGCTTCGGAATTGCGGTGGCGATGATGATGGGAGCAACCAGCATGAGCAGGAGACAGGAGTATGGGAAGGGGTGGGTGGAAGGAGAATGCTATTTGGTCAAAGACGGAGTATTTGTTGGCGCGGCCCTCTTGGTTCTCATTAATGGAGGGTCCACCATAGGTTCGGCTGCCATTGGAAGGAGGCGGCGCGCTAAAGGGCCCAATCAAGTACATGCACAAATTAGATAA

Homology

[Close]

BLAST of CmoCh09G007510 vs. TrEMBL
Match: A0A0A0L099_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G247410 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.8e-74
Identity = 145/184 (78.80%), Postives = 159/184 (86.41%), Query Frame = 1


Query: 1   MEKPPSS-FVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVA 60
           ME P SS FVISFS+VA+LTLASFASCMAAEFNRTKK+DLKLN + CFLPESEAFKLG+ 
Sbjct: 56  MESPSSSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIG 115

Query: 61  GIVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLISWVSFGIAVAMMMGATSM 120
           G++CLIMA IIG T+ICH+YWPKEHRKSCSVK+PLLS  LLISWVSF IAV M+ GATSM
Sbjct: 116 GLLCLIMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMVSGATSM 175

Query: 121 SRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRRR-----RAKGPNQV 179
           SRRQEY KGWVEGECYLVKDG+FV AA+LVLINGGSTI SAAIG RR       K PNQ+
Sbjct: 176 SRRQEYAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQI 235

[Close]

BLAST of CmoCh09G007510 vs. TrEMBL
Match: D7TFD2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00640 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-42
Identity = 89/179 (49.72%), Postives = 131/179 (73.18%), Query Frame = 1


Query: 1   MEKPPSSFVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAG 60
           MEK   + ++  SI+A L L +F  C+AAEF R+KKKD+KLNG+ C+L ES AF+LGVA 
Sbjct: 1   MEKHRFASLLIPSIIAFLGLMAFGLCVAAEFKRSKKKDVKLNGKLCYLAESGAFQLGVAA 60

Query: 61  IVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLL-ISWVSFGIAVAMMMGATSM 120
           ++CL +AHI+GN +IC      E   S   K P +++TLL +SW+SFG+A+ +M  ATSM
Sbjct: 61  LICLFIAHILGNMVICRRICSGEKSSSGKAKTPWITSTLLVVSWISFGVALILMGTATSM 120

Query: 121 SRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAI-GRRRRAKGPNQVHAQ 178
           +RRQ Y +GW++G+CY+VKDGV+VG+A+LV++  GST+GS  + GR+ + +   ++HAQ
Sbjct: 121 NRRQPYRRGWLDGKCYIVKDGVYVGSAVLVMLTIGSTLGSVIMTGRKSQVEQGRRIHAQ 179

[Close]

BLAST of CmoCh09G007510 vs. TrEMBL
Match: A0A068UFA9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024403001 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.9e-41
Identity = 85/182 (46.70%), Postives = 127/182 (69.78%), Query Frame = 1


Query: 1   MEKPPSSF--VISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGV 60
           ME+   S+  ++  S++ +L L SF+ C AAEF R+KK+DL+ NG+ C+L  SE F LGV
Sbjct: 1   MERHHCSYAVILLLSLIIILGLISFSLCFAAEFKRSKKEDLRFNGKLCYLAGSEGFDLGV 60

Query: 61  AGIVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRP-LLSTTLLISWVSFGIAVAMMMGAT 120
           A +V L +A IIGN ++C  +W + H + C  K+P ++  +L++SW+SFG+ V ++  A 
Sbjct: 61  AALVFLFIAQIIGNLLVCCKFWSRSHERGCKTKQPKIVIISLVLSWISFGVTVILLGAAA 120

Query: 121 SMSRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRRRR--AKGPNQVH 178
           SMS+ Q YG+GW++GECY+VKDG+F+G+A+L+LI  G+TI S  I  RRR   K   +VH
Sbjct: 121 SMSKSQPYGEGWLDGECYVVKDGIFLGSAILILITLGTTISSIIITIRRRQAEKEGRKVH 180

[Close]

BLAST of CmoCh09G007510 vs. TrEMBL
Match: V4T3Z0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012886mg PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.7e-39
Identity = 82/174 (47.13%), Postives = 122/174 (70.11%), Query Frame = 1


Query: 8   FVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAGIVCLIMA 67
           FV    I+  L L SF SC+ AE  + K+KDLKL+G+ C+LPES A +LG+A ++CL +A
Sbjct: 10  FVFVLCIIISLDLVSFISCLIAEAKKAKRKDLKLDGKLCYLPESHAHELGIAALICLGVA 69

Query: 68  HIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLI-SWVSFGIAVAMMMGATSMSRRQEYG 127
            +IGN +IC  +  ++ R +C  ++  ++T LL+ SW+SFG+AV ++  ATSMSR+Q YG
Sbjct: 70  QVIGNLLICRIFCTRDKRNNCKTQKLRIATALLVLSWISFGVAVILLGAATSMSRKQPYG 129

Query: 128 KGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIG--RRRRAKGPNQVHAQI 179
           KGW++ ECYLVKDGVF G+  LVL++ GS + +A +   R+ + +   +VHAQI
Sbjct: 130 KGWLDRECYLVKDGVFGGSGGLVLVSSGSIVAAAIVSSQRKTQVEQRRRVHAQI 183

[Close]

BLAST of CmoCh09G007510 vs. TrEMBL
Match: A0A067FY76_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030101mg PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.7e-39
Identity = 82/174 (47.13%), Postives = 122/174 (70.11%), Query Frame = 1


Query: 8   FVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAGIVCLIMA 67
           FV    I+  L L SF SC+ AE  + K+KDLKL+G+ C+LPES A +LG+A ++CL +A
Sbjct: 10  FVFVLCIIISLDLVSFISCLIAEAKKAKRKDLKLDGKLCYLPESHAHELGIAALICLGVA 69

Query: 68  HIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLI-SWVSFGIAVAMMMGATSMSRRQEYG 127
            +IGN +IC  +  ++ R +C  ++  ++T LL+ SW+SFG+AV ++  ATSMSR+Q YG
Sbjct: 70  QVIGNLLICRIFCTRDKRNNCKTQKLRIATALLVLSWISFGVAVILLGAATSMSRKQPYG 129

Query: 128 KGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIG--RRRRAKGPNQVHAQI 179
           KGW++ ECYLVKDGVF G+  LVL++ GS + +A +   R+ + +   +VHAQI
Sbjct: 130 KGWLDRECYLVKDGVFGGSGGLVLVSSGSIVAAAIVSSQRKTQVEQRRRVHAQI 183

[Close]

BLAST of CmoCh09G007510 vs. TAIR10
Match: AT1G31720.1 (AT1G31720.1 Protein of unknown function (DUF1218))

HSP 1 Score: 118.6 bits (296), Expect = 3.9e-27
Identity = 64/167 (38.32%), Postives = 95/167 (56.89%), Query Frame = 1


Query: 5   PSSFVISFSIVAVLTLASFASCMAAEFNRTKK----------KDLKLNGRFCFLPESEAF 64
           P SF+  F  + +  LA+F  C++AEF + K           KDLK +G  C+LPE+ AF
Sbjct: 13  PKSFLF-FMFIFLFGLAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRAF 72

Query: 65  KLGVAGIVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLISWVSFGIAVAMMM 124
            LG+A +VC+ +A I+GN +IC  +   +  ++           LL SWV+F +AV ++ 
Sbjct: 73  GLGIAALVCVSVAQIVGNVVICRGFTKTDKTRTTI----FCIILLLFSWVNFAVAVTLIS 132

Query: 125 GATSMSRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAA 162
              SM+R Q YGKGW+  ECYLVKDGVF  +  L +    + +G+ A
Sbjct: 133 VGASMNREQIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGAFA 174

[Close]

BLAST of CmoCh09G007510 vs. TAIR10
Match: AT4G19370.1 (AT4G19370.1 Protein of unknown function (DUF1218))

HSP 1 Score: 114.4 bits (285), Expect = 7.3e-26
Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 1


Query: 12  FSIVAVLTLASFASCMAAEFNRTKKKDLKLNG-RFCFLPESEAFKLGVAGIVCLIMAHII 71
           +S+V  L L SF +C AAEF RT+K+D++ +  R C++P S AF LG A ++C  +A I+
Sbjct: 7   YSVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIV 66

Query: 72  GNTIICHTYWPKEHRKSCSVKRPLLSTT--LLISWVSFGIAVAMMMGATSMSRRQEYGKG 131
           GN ++   +  +  R+       L   T  LL+SW +F + V ++  A SMSR Q YG+G
Sbjct: 67  GNIVVFRNHRTRTKREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAYGEG 126

Query: 132 WVEGECYLVKDGVFVGAALLVLINGGSTIGSA 161
           W++ +CYLVKDGVF  +  L ++  G+   SA
Sbjct: 127 WLDEDCYLVKDGVFAASGCLAILGLGALTISA 158

[Close]

BLAST of CmoCh09G007510 vs. NCBI nr
Match: gi|659087031|ref|XP_008444240.1| (PREDICTED: uncharacterized protein LOC103487629 [Cucumis melo])

HSP 1 Score: 302.8 bits (774), Expect = 4.1e-79
Identity = 153/182 (84.07%), Postives = 166/182 (91.21%), Query Frame = 1


Query: 1   MEKPPSS-FVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVA 60
           MEKP SS FVISFSIVA+LTLASFASC+AAEFNRTKK+DLKLNG+FCFLPESEAFKLG+ 
Sbjct: 1   MEKPSSSSFVISFSIVAILTLASFASCLAAEFNRTKKEDLKLNGKFCFLPESEAFKLGIG 60

Query: 61  GIVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLISWVSFGIAVAMMMGATSM 120
           G+VCLIMA IIG+T+I H+YWPKEHRKSCSVK+PLLS  LLISWVSF IAV MM GATSM
Sbjct: 61  GLVCLIMAQIIGSTLIYHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMMSGATSM 120

Query: 121 SRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRRRR---AKGPNQVHA 179
           SRRQEY +GWVEGECYLVKDG+FVGAALLVLINGGSTIGSAAIGRRRR    K PNQ+HA
Sbjct: 121 SRRQEYARGWVEGECYLVKDGIFVGAALLVLINGGSTIGSAAIGRRRRNHVVKAPNQIHA 180

[Close]

BLAST of CmoCh09G007510 vs. NCBI nr
Match: gi|778692678|ref|XP_004150759.2| (PREDICTED: uncharacterized protein LOC101207283 [Cucumis sativus])

HSP 1 Score: 286.2 bits (731), Expect = 4.0e-74
Identity = 145/184 (78.80%), Postives = 159/184 (86.41%), Query Frame = 1


Query: 1   MEKPPSS-FVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVA 60
           ME P SS FVISFS+VA+LTLASFASCMAAEFNRTKK+DLKLN + CFLPESEAFKLG+ 
Sbjct: 56  MESPSSSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIG 115

Query: 61  GIVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLISWVSFGIAVAMMMGATSM 120
           G++CLIMA IIG T+ICH+YWPKEHRKSCSVK+PLLS  LLISWVSF IAV M+ GATSM
Sbjct: 116 GLLCLIMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMVSGATSM 175

Query: 121 SRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRRR-----RAKGPNQV 179
           SRRQEY KGWVEGECYLVKDG+FV AA+LVLINGGSTI SAAIG RR       K PNQ+
Sbjct: 176 SRRQEYAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQI 235

[Close]

BLAST of CmoCh09G007510 vs. NCBI nr
Match: gi|225427623|ref|XP_002269579.1| (PREDICTED: uncharacterized protein LOC100266552 isoform X1 [Vitis vinifera])

HSP 1 Score: 180.3 bits (456), Expect = 3.1e-42
Identity = 89/179 (49.72%), Postives = 131/179 (73.18%), Query Frame = 1


Query: 1   MEKPPSSFVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAG 60
           MEK   + ++  SI+A L L +F  C+AAEF R+KKKD+KLNG+ C+L ES AF+LGVA 
Sbjct: 1   MEKHRFASLLIPSIIAFLGLMAFGLCVAAEFKRSKKKDVKLNGKLCYLAESGAFQLGVAA 60

Query: 61  IVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLL-ISWVSFGIAVAMMMGATSM 120
           ++CL +AHI+GN +IC      E   S   K P +++TLL +SW+SFG+A+ +M  ATSM
Sbjct: 61  LICLFIAHILGNMVICRRICSGEKSSSGKAKTPWITSTLLVVSWISFGVALILMGTATSM 120

Query: 121 SRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAI-GRRRRAKGPNQVHAQ 178
           +RRQ Y +GW++G+CY+VKDGV+VG+A+LV++  GST+GS  + GR+ + +   ++HAQ
Sbjct: 121 NRRQPYRRGWLDGKCYIVKDGVYVGSAVLVMLTIGSTLGSVIMTGRKSQVEQGRRIHAQ 179

[Close]

BLAST of CmoCh09G007510 vs. NCBI nr
Match: gi|661889251|emb|CDP07220.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 175.3 bits (443), Expect = 9.9e-41
Identity = 85/182 (46.70%), Postives = 127/182 (69.78%), Query Frame = 1


Query: 1   MEKPPSSF--VISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGV 60
           ME+   S+  ++  S++ +L L SF+ C AAEF R+KK+DL+ NG+ C+L  SE F LGV
Sbjct: 1   MERHHCSYAVILLLSLIIILGLISFSLCFAAEFKRSKKEDLRFNGKLCYLAGSEGFDLGV 60

Query: 61  AGIVCLIMAHIIGNTIICHTYWPKEHRKSCSVKRP-LLSTTLLISWVSFGIAVAMMMGAT 120
           A +V L +A IIGN ++C  +W + H + C  K+P ++  +L++SW+SFG+ V ++  A 
Sbjct: 61  AALVFLFIAQIIGNLLVCCKFWSRSHERGCKTKQPKIVIISLVLSWISFGVTVILLGAAA 120

Query: 121 SMSRRQEYGKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRRRR--AKGPNQVH 178
           SMS+ Q YG+GW++GECY+VKDG+F+G+A+L+LI  G+TI S  I  RRR   K   +VH
Sbjct: 121 SMSKSQPYGEGWLDGECYVVKDGIFLGSAILILITLGTTISSIIITIRRRQAEKEGRKVH 180

[Close]

BLAST of CmoCh09G007510 vs. NCBI nr
Match: gi|747070688|ref|XP_011082176.1| (PREDICTED: uncharacterized protein LOC105165002 [Sesamum indicum])

HSP 1 Score: 174.1 bits (440), Expect = 2.2e-40
Identity = 88/174 (50.57%), Postives = 123/174 (70.69%), Query Frame = 1


Query: 7   SFVISFSIVAVLTLASFASCMAAEFNRTKKKDLKLNGRFCFLPESEAFKLGVAGIVCLIM 66
           SF    SI+    L SFA C+AAEF ++KK DL+L+G+ C+LPES AF+LG+A ++ L +
Sbjct: 8   SFAFFSSIIITSALVSFALCLAAEFKKSKKDDLRLDGKLCYLPESAAFELGIAAVISLCI 67

Query: 67  AHIIGNTIICHTYWPKEHRKSCSVKRPLLSTTLLI-SWVSFGIAVAMMMGATSMSRRQEY 126
           + +IG   IC      E    C +++P  S +LLI SW+SFGIAV +M GATSMSR Q +
Sbjct: 68  SQVIGIFFICRKLGSAEQDSGCKLRKPTASYSLLIFSWISFGIAVILMSGATSMSRGQPF 127

Query: 127 GKGWVEGECYLVKDGVFVGAALLVLINGGSTIGSAAIGRR-RRAKGPNQVHAQI 179
           G+GW++GECYLVKDG++VG+A+L L+  GS +GSAAI    R+A+   +VHAQ+
Sbjct: 128 GEGWLDGECYLVKDGIYVGSAVLGLLALGSNLGSAAITMMPRKAEENRRVHAQV 181

The following BLAST results are available for this feature:

BLAST of CmoCh09G007510 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh09G007510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L099_CUCSA	2.8e-74	78.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G247410 PE=4 SV=1	[more]
D7TFD2_VITVI	2.1e-42	49.72	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00640 PE=4 SV=...	[more]
A0A068UFA9_COFCA	6.9e-41	46.70	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024403001 PE=4 SV=1	[more]
V4T3Z0_9ROSI	1.7e-39	47.13	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012886mg PE=4 SV=1	[more]
A0A067FY76_CITSI	1.7e-39	47.13	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030101mg PE=4 SV=1	[more]

BLAST of CmoCh09G007510 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31720.1	3.9e-27	38.32	Protein of unknown function (DUF1218)	[more]
AT4G19370.1	7.3e-26	40.13	Protein of unknown function (DUF1218)	[more]

BLAST of CmoCh09G007510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659087031\|ref\|XP_008444240.1\|	4.1e-79	84.07	PREDICTED: uncharacterized protein LOC103487629 [Cucumis melo]	[more]
gi\|778692678\|ref\|XP_004150759.2\|	4.0e-74	78.80	PREDICTED: uncharacterized protein LOC101207283 [Cucumis sativus]	[more]
gi\|225427623\|ref\|XP_002269579.1\|	3.1e-42	49.72	PREDICTED: uncharacterized protein LOC100266552 isoform X1 [Vitis vinifera]	[more]
gi\|661889251\|emb\|CDP07220.1\|	9.9e-41	46.70	unnamed protein product [Coffea canephora]	[more]
gi\|747070688\|ref\|XP_011082176.1\|	2.2e-40	50.57	PREDICTED: uncharacterized protein LOC105165002 [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001851	ABC_transp_permease
IPR009606	DUF1218

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
biological_process	GO:0008150	biological_process
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0022857	transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G007510.1	CmoCh09G007510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001851	ABC transporter, permease	PFAM	PF02653	BPD_transp_2	coord: 9..173 score: 1.
IPR009606	Protein of unknown function DUF1218	PFAM	PF06749	DUF1218	coord: 61..151 score: 3.5
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 1..178 score: 1.0
None	No IPR available	PANTHER	PTHR31769:SF6	SUBFAMILY NOT NAMED	coord: 1..178 score: 1.0
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..26 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh09G007510	CmaCh01G013550	Cucurbita maxima (Rimu)	cmacmoB432
CmoCh09G007510	Csa4G247410	Cucumber (Chinese Long) v2	cmocuB014
CmoCh09G007510	ClCG11G016110	Watermelon (Charleston Gray)	cmowcgB009
CmoCh09G007510	CSPI04G12260	Wild cucumber (PI 183967)	cmocpiB014
CmoCh09G007510	Lsi04G018480	Bottle gourd (USVL1VR-Ls)	cmolsiB013
CmoCh09G007510	Cp4.1LG06g05870	Cucurbita pepo (Zucchini)	cmocpeB034
CmoCh09G007510	Bhi09G002288	Wax gourd	cmowgoB0031
CmoCh09G007510	CsGy4G011350	Cucumber (Gy14) v2	cgybcmoB436
CmoCh09G007510	Carg00300	Silver-seed gourd	carcmoB0906
CmoCh09G007510	Carg20076	Silver-seed gourd	carcmoB1399

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh09G007510	CmoCh01G014090	Cucurbita moschata (Rifu)	cmocmoB013

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh09G007510	Cucumber (Chinese Long) v3	cmocucB0018
CmoCh09G007510	Watermelon (97103) v2	cmowmbB009
CmoCh09G007510	Watermelon (97103) v2	cmowmbB032
CmoCh09G007510	Cucurbita moschata (Rifu)	cmocmoB008
CmoCh09G007510	Cucurbita maxima (Rimu)	cmacmoB027
CmoCh09G007510	Melon (DHL92) v3.5.1	cmomeB025
CmoCh09G007510	Watermelon (97103) v1	cmowmB030
CmoCh09G007510	Cucurbita pepo (Zucchini)	cmocpeB010
CmoCh09G007510	Cucurbita pepo (Zucchini)	cmocpeB029
CmoCh09G007510	Bottle gourd (USVL1VR-Ls)	cmolsiB029
CmoCh09G007510	Cucumber (Gy14) v2	cgybcmoB684
CmoCh09G007510	Melon (DHL92) v3.6.1	cmomedB025