Csa4G247410 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G247410
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionDbj|BAA92731.1; contains IPR009606 (Protein of unknown function DUF1218)
LocationChr4 : 10261148 .. 10262912 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATGAAGTCTAAGATTTCACAAGTCAAGAGAGAAAATCATGAATTTTCCACCACTAACCTCCAACATTCATTCCTTTATTTCCAAAACCATGATTTAAACACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCCGTCTTCTTCTTCTTCAACCCGCCATGGAAAGCCCCTCTTCTTCTAGCTTTGTAATAAGCTTTTCCGTTGTTGCCATCCTCACACTCGCCTCTTTCGCATCATGTATGGCGGCTGAATTCAACAGGACGAAAGTAAGTTTCTTTCAGCTTTATTTATTTATCCTTTTTTTCATTTGTAACTCTTATTAATTAGAATTTCTTGAAAAAATTGGAATCTGTTGTAGAAAGAGGACCTGAAATTGAATGCAAAATTATGCTTTCTGCCTGAAAGTGAAGCATTCAAATTGGGAATTGGAGGTTTGCTTTGTTTAATAATGGCTCAGATCATTGGAACTACCTTAATCTGCCATAGCTATTGGCCTAAAGAGCATAGAAAAAGCTGCAGTGTCAAAAAACCTCTGCTTTCCATCGCCCTTCTCATCTCTTGGTCAGTAAATTATTTCTTCATACTATTCTTCTCTATCTATTTATCACTGCGTGGCGTGAAAAAATTTCATAATATATATTATTGTTAATTCAACATACATACCTTAGTAAACTTTATTTATTTGGTCTAATTTTTAAGAATGACTAGTAGAACTATTAGGTAGAAAATTGTTTAATAATTTTTAACTTTGTGTGAGGCATGAGTTTTCAAAAGTTGGTTCTAGAGTTTAAGAGTGATATTTTTAATTTTAAAAATTTAGTGCTTTTAAAATTTAATCAAACATGCTTAATTTTTATTATGTTATTTATTGCAAAAATGAAGATTTTTTTGAATTGGCACTAAAAAAACAATGCATTAAAACAACGTGGCCAGCTTTGAGGTGGTTCGGATTCCTATACACATAGGATCCATGATCTAGTAAATTACAAAATAACATTTATTATTATTACTACTAATAAATATATTTTTAGTACAATGAAAAAAAAAATCAGTGATTTAAAAAACTTATCCTGTGACTAATAACGATTCTTTTGATGGTGGTTAAAAGTAAATCCTAAAGTTCATATAATTTAATCATTTTAAGCAAAAGGAATCTTTCAACTTCCACCCAATTTCCTTTCTAAAAGGCTGTCTCTTTTTTAAAATAGTATAATATAATATAATAACTTTCCAAATTATTATGTTATTATTATCAACAAAAATAGAAAAAAATTCAAACATCATACACAATAATACTTACACTTAAAAGTGTACCACTCTACTCATGTTAGTGTATCGAGATCATTTTCTCACACTTTATTTCATTTGAACATTGGGATGGAAAGTGATGAGAGTAAGTAAGCAAATTTGAAAAAGAATAGAGAGAAAGAAATGAAATTAATAATAAAGAGAATAAAAGAGAATTTAAAAGGGTAAATGAAATAGCAGGGTTAGTTTCGTAATAGCGGTGATAATGGTGAGTGGAGCAACAAGCATGAGCAGGAGACAAGAGTACGCGAAGGGATGGGTGGAGGGAGAATGCTATTTGGTCAAAGACGGAATCTTTGTATCCGCCGCCGTATTGGTTCTCATTAACGGAGGCTCCACCATCGCCTCCGCGGCCATTGGGATGAGGAGGTGGAGGACCAACCATGTTATTAAACCACCCAATCAAATACATGCTCAGATTGGCTAACAAAAACAATATTACACACCTCA

mRNA sequence

ATGAAGATGAAGTCTAAGATTTCACAAGTCAAGAGAGAAAATCATGAATTTTCCACCACTAACCTCCAACATTCATTCCTTTATTTCCAAAACCATGATTTAAACACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCCGTCTTCTTCTTCTTCAACCCGCCATGGAAAGCCCCTCTTCTTCTAGCTTTGTAATAAGCTTTTCCGTTGTTGCCATCCTCACACTCGCCTCTTTCGCATCATGTATGGCGGCTGAATTCAACAGGACGAAAAAAGAGGACCTGAAATTGAATGCAAAATTATGCTTTCTGCCTGAAAGTGAAGCATTCAAATTGGGAATTGGAGGTTTGCTTTGTTTAATAATGGCTCAGATCATTGGAACTACCTTAATCTGCCATAGCTATTGGCCTAAAGAGCATAGAAAAAGCTGCAGTGTCAAAAAACCTCTGCTTTCCATCGCCCTTCTCATCTCTTGGGTTAGTTTCGTAATAGCGGTGATAATGGTGAGTGGAGCAACAAGCATGAGCAGGAGACAAGAGTACGCGAAGGGATGGGTGGAGGGAGAATGCTATTTGGTCAAAGACGGAATCTTTGTATCCGCCGCCGTATTGGTTCTCATTAACGGAGGCTCCACCATCGCCTCCGCGGCCATTGGGATGAGGAGGTGGAGGACCAACCATGTTATTAAACCACCCAATCAAATACATGCTCAGATTGGCTAA

Coding sequence (CDS)

ATGAAGATGAAGTCTAAGATTTCACAAGTCAAGAGAGAAAATCATGAATTTTCCACCACTAACCTCCAACATTCATTCCTTTATTTCCAAAACCATGATTTAAACACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCCGTCTTCTTCTTCTTCAACCCGCCATGGAAAGCCCCTCTTCTTCTAGCTTTGTAATAAGCTTTTCCGTTGTTGCCATCCTCACACTCGCCTCTTTCGCATCATGTATGGCGGCTGAATTCAACAGGACGAAAAAAGAGGACCTGAAATTGAATGCAAAATTATGCTTTCTGCCTGAAAGTGAAGCATTCAAATTGGGAATTGGAGGTTTGCTTTGTTTAATAATGGCTCAGATCATTGGAACTACCTTAATCTGCCATAGCTATTGGCCTAAAGAGCATAGAAAAAGCTGCAGTGTCAAAAAACCTCTGCTTTCCATCGCCCTTCTCATCTCTTGGGTTAGTTTCGTAATAGCGGTGATAATGGTGAGTGGAGCAACAAGCATGAGCAGGAGACAAGAGTACGCGAAGGGATGGGTGGAGGGAGAATGCTATTTGGTCAAAGACGGAATCTTTGTATCCGCCGCCGTATTGGTTCTCATTAACGGAGGCTCCACCATCGCCTCCGCGGCCATTGGGATGAGGAGGTGGAGGACCAACCATGTTATTAAACCACCCAATCAAATACATGCTCAGATTGGCTAA

Protein sequence

MKMKSKISQVKRENHEFSTTNLQHSFLYFQNHDLNTSSSSSSSSSSFRLLLLQPAMESPSSSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIGGLLCLIMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMVSGATSMSRRQEYAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQIHAQIG*
Homology
[Close]
BLAST of Csa4G247410 vs. TrEMBL
Match: A0A0A0L099_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G247410 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 4.8e-130
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1 

Query: 1   MKMKSKISQVKRENHEFSTTNLQHSFLYFQNHDLNTSSSSSSSSSSFRLLLLQPAMESPS 60
           MKMKSKISQVKRENHEFSTTNLQHSFLYFQNHDLNTSSSSSSSSSSFRLLLLQPAMESPS
Sbjct: 1   MKMKSKISQVKRENHEFSTTNLQHSFLYFQNHDLNTSSSSSSSSSSFRLLLLQPAMESPS 60

Query: 61  SSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIGGLLCL 120
           SSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIGGLLCL
Sbjct: 61  SSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIGGLLCL 120

Query: 121 IMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMVSGATSMSRRQE 180
           IMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMVSGATSMSRRQE
Sbjct: 121 IMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMVSGATSMSRRQE 180

Query: 181 YAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQIHAQIG 240
           YAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQIHAQIG
Sbjct: 181 YAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQIHAQIG 240

[Close]
BLAST of Csa4G247410 vs. TrEMBL
Match: A0A068UFA9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024403001 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 7.1e-41
Identity = 83/179 (46.37%), Postives = 124/179 (69.27%), Query Frame = 1 

Query: 61  SSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIGGLLCL 120
           S + ++  S++ IL L SF+ C AAEF R+KKEDL+ N KLC+L  SE F LG+  L+ L
Sbjct: 7   SYAVILLLSLIIILGLISFSLCFAAEFKRSKKEDLRFNGKLCYLAGSEGFDLGVAALVFL 66

Query: 121 IMAQIIGTTLICHSYWPKEHRKSCSVKKP-LLSIALLISWVSFVIAVIMVSGATSMSRRQ 180
            +AQIIG  L+C  +W + H + C  K+P ++ I+L++SW+SF + VI++  A SMS+ Q
Sbjct: 67  FIAQIIGNLLVCCKFWSRSHERGCKTKQPKIVIISLVLSWISFGVTVILLGAAASMSKSQ 126

Query: 181 EYAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQIHAQ 239
            Y +GW++GECY+VKDGIF+ +A+L+LI  G+TI+S  I +RR +     K   ++HAQ
Sbjct: 127 PYGEGWLDGECYVVKDGIFLGSAILILITLGTTISSIIITIRRRQAE---KEGRKVHAQ 182

[Close]
BLAST of Csa4G247410 vs. TrEMBL
Match: V4T3Z0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012886mg PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.3e-38
Identity = 81/177 (45.76%), Postives = 120/177 (67.80%), Query Frame = 1 

Query: 64  FVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIGGLLCLIMA 123
           FV    ++  L L SF SC+ AE  + K++DLKL+ KLC+LPES A +LGI  L+CL +A
Sbjct: 10  FVFVLCIIISLDLVSFISCLIAEAKKAKRKDLKLDGKLCYLPESHAHELGIAALICLGVA 69

Query: 124 QIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLI-SWVSFVIAVIMVSGATSMSRRQEYA 183
           Q+IG  LIC  +  ++ R +C  +K  ++ ALL+ SW+SF +AVI++  ATSMSR+Q Y 
Sbjct: 70  QVIGNLLICRIFCTRDKRNNCKTQKLRIATALLVLSWISFGVAVILLGAATSMSRKQPYG 129

Query: 184 KGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQIHAQI 240
           KGW++ ECYLVKDG+F  +  LVL++ GS +A+A +  +R      ++   ++HAQI
Sbjct: 130 KGWLDRECYLVKDGVFGGSGGLVLVSSGSIVAAAIVSSQR---KTQVEQRRRVHAQI 183

[Close]
BLAST of Csa4G247410 vs. TrEMBL
Match: A0A067FY76_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030101mg PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.3e-38
Identity = 81/177 (45.76%), Postives = 120/177 (67.80%), Query Frame = 1 

Query: 64  FVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIGGLLCLIMA 123
           FV    ++  L L SF SC+ AE  + K++DLKL+ KLC+LPES A +LGI  L+CL +A
Sbjct: 10  FVFVLCIIISLDLVSFISCLIAEAKKAKRKDLKLDGKLCYLPESHAHELGIAALICLGVA 69

Query: 124 QIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLI-SWVSFVIAVIMVSGATSMSRRQEYA 183
           Q+IG  LIC  +  ++ R +C  +K  ++ ALL+ SW+SF +AVI++  ATSMSR+Q Y 
Sbjct: 70  QVIGNLLICRIFCTRDKRNNCKTQKLRIATALLVLSWISFGVAVILLGAATSMSRKQPYG 129

Query: 184 KGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQIHAQI 240
           KGW++ ECYLVKDG+F  +  LVL++ GS +A+A +  +R      ++   ++HAQI
Sbjct: 130 KGWLDRECYLVKDGVFGGSGGLVLVSSGSIVAAAIVSSQR---KTQVEQRRRVHAQI 183

[Close]
BLAST of Csa4G247410 vs. TrEMBL
Match: A0A0K9RDW3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_082570 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-37
Identity = 79/170 (46.47%), Postives = 115/170 (67.65%), Query Frame = 1 

Query: 56  MESPSSSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIG 115
           ME     ++ ++   V  L + +F  C+ AEF ++K ED+K++ KLC LPE+EAF LG  
Sbjct: 1   MEKTQLFTYTLTLCTVLSLAVLAFVFCILAEFKKSKVEDVKVDGKLCELPENEAFWLGTA 60

Query: 116 GLLCLIMAQIIGTTLICHSYWP--KEHRKSCSVKKPLLSIALLI-SWVSFVIAVIMVSGA 175
            L+C  +AQIIG ++    YW   KE R  C  K+P ++I LLI SW++F I++ ++S A
Sbjct: 61  ALICFTIAQIIGNSIFFVGYWSDSKERRSCCQFKRPTVAIILLIISWINFGISITLISTA 120

Query: 176 TSMSRRQEYAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRR 223
           TSM+RRQ Y KGW+ GECY+VKDGIFV A++L+L+  G T+ASA   +R+
Sbjct: 121 TSMNRRQSYGKGWLNGECYIVKDGIFVGASILILVTLGCTLASAVATLRK 170

[Close]
BLAST of Csa4G247410 vs. TAIR10
Match: AT4G19370.1 (AT4G19370.1 Protein of unknown function (DUF1218))

HSP 1 Score: 122.9 bits (307), Expect = 2.8e-28
Identity = 67/173 (38.73%), Postives = 106/173 (61.27%), Query Frame = 1 

Query: 68  FSVVAILTLASFASCMAAEFNRTKKEDLKLNAKL-CFLPESEAFKLGIGGLLCLIMAQII 127
           +SVV  L L SF +C AAEF RT+KED++ + +  C++P S AF LG   +LC  +AQI+
Sbjct: 7   YSVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIV 66

Query: 128 GTTLICHSYWPKEHRKSCS--VKKPLLSIALLISWVSFVIAVIMVSGATSMSRRQEYAKG 187
           G  ++  ++  +  R+         L ++ LL+SW +FV+ V+++S A SMSR Q Y +G
Sbjct: 67  GNIVVFRNHRTRTKREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAYGEG 126

Query: 188 WVEGECYLVKDGIFVSAAVLVLIN-GGSTIASAAIGMRRWR--TNHVIKPPNQ 235
           W++ +CYLVKDG+F ++  L ++  G  TI++  I +++ +     VIK  NQ
Sbjct: 127 WLDEDCYLVKDGVFAASGCLAILGLGALTISATRIKVKKQQQLVQVVIKDQNQ 179

[Close]
BLAST of Csa4G247410 vs. TAIR10
Match: AT1G31720.1 (AT1G31720.1 Protein of unknown function (DUF1218))

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-25
Identity = 58/164 (35.37%), Postives = 91/164 (55.49%), Query Frame = 1 

Query: 68  FSVVAILTLASFASCMAAEFNRTKK----------EDLKLNAKLCFLPESEAFKLGIGGL 127
           F  + +  LA+F  C++AEF + K           +DLK + + C+LPE+ AF LGI  L
Sbjct: 19  FMFIFLFGLAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRAFGLGIAAL 78

Query: 128 LCLIMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMVSGATSMSR 187
           +C+ +AQI+G  +IC  +   +  ++         I LL SWV+F +AV ++S   SM+R
Sbjct: 79  VCVSVAQIVGNVVICRGFTKTDKTRTTI----FCIILLLFSWVNFAVAVTLISVGASMNR 138

Query: 188 RQEYAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMR 222
            Q Y KGW+  ECYLVKDG+F ++  L +    + + + A  ++
Sbjct: 139 EQIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGAFAFKVK 178

[Close]
BLAST of Csa4G247410 vs. NCBI nr
Match: gi|778692678|ref|XP_004150759.2| (PREDICTED: uncharacterized protein LOC101207283 [Cucumis sativus])

HSP 1 Score: 471.9 bits (1213), Expect = 6.9e-130
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1 

Query: 1   MKMKSKISQVKRENHEFSTTNLQHSFLYFQNHDLNTSSSSSSSSSSFRLLLLQPAMESPS 60
           MKMKSKISQVKRENHEFSTTNLQHSFLYFQNHDLNTSSSSSSSSSSFRLLLLQPAMESPS
Sbjct: 1   MKMKSKISQVKRENHEFSTTNLQHSFLYFQNHDLNTSSSSSSSSSSFRLLLLQPAMESPS 60

Query: 61  SSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIGGLLCL 120
           SSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIGGLLCL
Sbjct: 61  SSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIGGLLCL 120

Query: 121 IMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMVSGATSMSRRQE 180
           IMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMVSGATSMSRRQE
Sbjct: 121 IMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMVSGATSMSRRQE 180

Query: 181 YAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQIHAQIG 240
           YAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQIHAQIG
Sbjct: 181 YAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQIHAQIG 240

[Close]
BLAST of Csa4G247410 vs. NCBI nr
Match: gi|659087031|ref|XP_008444240.1| (PREDICTED: uncharacterized protein LOC103487629 [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 1.6e-86
Identity = 166/185 (89.73%), Postives = 174/185 (94.05%), Query Frame = 1 

Query: 56  MESPSSSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIG 115
           ME PSSSSFVISFS+VAILTLASFASC+AAEFNRTKKEDLKLN K CFLPESEAFKLGIG
Sbjct: 1   MEKPSSSSFVISFSIVAILTLASFASCLAAEFNRTKKEDLKLNGKFCFLPESEAFKLGIG 60

Query: 116 GLLCLIMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMVSGATSM 175
           GL+CLIMAQIIG+TLI HSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIM+SGATSM
Sbjct: 61  GLVCLIMAQIIGSTLIYHSYWPKEHRKSCSVKKPLLSIALLISWVSFVIAVIMMSGATSM 120

Query: 176 SRRQEYAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQI 235
           SRRQEYA+GWVEGECYLVKDGIFV AA+LVLINGGSTI SAAIG R  R NHV+K PNQI
Sbjct: 121 SRRQEYARGWVEGECYLVKDGIFVGAALLVLINGGSTIGSAAIGRR--RRNHVVKAPNQI 180

Query: 236 HAQIG 241
           HAQIG
Sbjct: 181 HAQIG 183

[Close]
BLAST of Csa4G247410 vs. NCBI nr
Match: gi|661889251|emb|CDP07220.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 175.6 bits (444), Expect = 1.0e-40
Identity = 83/179 (46.37%), Postives = 124/179 (69.27%), Query Frame = 1 

Query: 61  SSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIGGLLCL 120
           S + ++  S++ IL L SF+ C AAEF R+KKEDL+ N KLC+L  SE F LG+  L+ L
Sbjct: 7   SYAVILLLSLIIILGLISFSLCFAAEFKRSKKEDLRFNGKLCYLAGSEGFDLGVAALVFL 66

Query: 121 IMAQIIGTTLICHSYWPKEHRKSCSVKKP-LLSIALLISWVSFVIAVIMVSGATSMSRRQ 180
            +AQIIG  L+C  +W + H + C  K+P ++ I+L++SW+SF + VI++  A SMS+ Q
Sbjct: 67  FIAQIIGNLLVCCKFWSRSHERGCKTKQPKIVIISLVLSWISFGVTVILLGAAASMSKSQ 126

Query: 181 EYAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQIHAQ 239
            Y +GW++GECY+VKDGIF+ +A+L+LI  G+TI+S  I +RR +     K   ++HAQ
Sbjct: 127 PYGEGWLDGECYVVKDGIFLGSAILILITLGTTISSIIITIRRRQAE---KEGRKVHAQ 182

[Close]
BLAST of Csa4G247410 vs. NCBI nr
Match: gi|747070688|ref|XP_011082176.1| (PREDICTED: uncharacterized protein LOC105165002 [Sesamum indicum])

HSP 1 Score: 170.2 bits (430), Expect = 4.3e-39
Identity = 89/185 (48.11%), Postives = 123/185 (66.49%), Query Frame = 1 

Query: 56  MESPSSSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIG 115
           ME     SF    S++    L SFA C+AAEF ++KK+DL+L+ KLC+LPES AF+LGI 
Sbjct: 1   MERLHRYSFAFFSSIIITSALVSFALCLAAEFKKSKKDDLRLDGKLCYLPESAAFELGIA 60

Query: 116 GLLCLIMAQIIGTTLICHSYWPKEHRKSCSVKKPLLSIALLI-SWVSFVIAVIMVSGATS 175
            ++ L ++Q+IG   IC      E    C ++KP  S +LLI SW+SF IAVI++SGATS
Sbjct: 61  AVISLCISQVIGIFFICRKLGSAEQDSGCKLRKPTASYSLLIFSWISFGIAVILMSGATS 120

Query: 176 MSRRQEYAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWRTNHVIKPPNQ 235
           MSR Q + +GW++GECYLVKDGI+V +AVL L+  GS + SAAI M   +     +   +
Sbjct: 121 MSRGQPFGEGWLDGECYLVKDGIYVGSAVLGLLALGSNLGSAAITMMPRKA----EENRR 180

Query: 236 IHAQI 240
           +HAQ+
Sbjct: 181 VHAQV 181

[Close]
BLAST of Csa4G247410 vs. NCBI nr
Match: gi|848873539|ref|XP_012837327.1| (PREDICTED: uncharacterized protein LOC105957897 [Erythranthe guttata])

HSP 1 Score: 167.9 bits (424), Expect = 2.1e-38
Identity = 78/171 (45.61%), Postives = 121/171 (70.76%), Query Frame = 1 

Query: 56  MESPSSSSFVISFSVVAILTLASFASCMAAEFNRTKKEDLKLNAKLCFLPESEAFKLGIG 115
           ME  +  SF I FS++   +L SFA C+ AEF ++KK DL+L+ K C+LP S AF+LGI 
Sbjct: 1   MEKLNKYSFAIFFSIIIASSLVSFALCLVAEFKKSKKNDLRLDGKWCYLPRSAAFELGIA 60

Query: 116 GLLCLIMAQIIGTTLICHSYWPKEHR-KSCSVKKPLLSIALLI-SWVSFVIAVIMVSGAT 175
            L+CL + Q++G+  IC  +   + + +SC V+KP +  +LL+ SWVSF IAVI++S  T
Sbjct: 61  ALICLSITQVVGSLFICRKFRSTDSQSRSCKVRKPTVPCSLLVFSWVSFGIAVIIISTGT 120

Query: 176 SMSRRQEYAKGWVEGECYLVKDGIFVSAAVLVLINGGSTIASAAIGMRRWR 225
           SMS+ Q + +GW++GECYLV+DG+++ +A+L ++  GS++ SA + +RR R
Sbjct: 121 SMSQSQPFGQGWLDGECYLVRDGVYIGSAILAMLANGSSLGSAIVTIRRKR 171

The following BLAST results are available for this feature:
BLAST of Csa4G247410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L099_CUCSA4.8e-130100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G247410 PE=4 SV=1[more]
A0A068UFA9_COFCA7.1e-4146.37Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024403001 PE=4 SV=1[more]
V4T3Z0_9ROSI4.3e-3845.76Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012886mg PE=4 SV=1[more]
A0A067FY76_CITSI4.3e-3845.76Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030101mg PE=4 SV=1[more]
A0A0K9RDW3_SPIOL1.6e-3746.47Uncharacterized protein OS=Spinacia oleracea GN=SOVF_082570 PE=4 SV=1[more]
BLAST of Csa4G247410 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G19370.12.8e-2838.73 Protein of unknown function (DUF1218)[more]
AT1G31720.11.7e-2535.37 Protein of unknown function (DUF1218)[more]
BLAST of Csa4G247410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778692678|ref|XP_004150759.2|6.9e-130100.00PREDICTED: uncharacterized protein LOC101207283 [Cucumis sativus][more]
gi|659087031|ref|XP_008444240.1|1.6e-8689.73PREDICTED: uncharacterized protein LOC103487629 [Cucumis melo][more]
gi|661889251|emb|CDP07220.1|1.0e-4046.37unnamed protein product [Coffea canephora][more]
gi|747070688|ref|XP_011082176.1|4.3e-3948.11PREDICTED: uncharacterized protein LOC105165002 [Sesamum indicum][more]
gi|848873539|ref|XP_012837327.1|2.1e-3845.61PREDICTED: uncharacterized protein LOC105957897 [Erythranthe guttata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009606DUF1218
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006810 transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005215 transporter activity
molecular_function GO:0022857 transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G247410.1Csa4G247410.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009606Protein of unknown function DUF1218PFAMPF06749DUF1218coord: 118..207
score: 3.6
NoneNo IPR availablePANTHERPTHR31769FAMILY NOT NAMEDcoord: 52..239
score: 4.8
NoneNo IPR availablePANTHERPTHR31769:SF6SUBFAMILY NOT NAMEDcoord: 52..239
score: 4.8