CSPI07G19760 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAGATTTCTCTTTTTTCCTACATGGTTTTTGCCTGAAAAGAAGAGGTTTCTCTCTTCTTTTTGGGGTTTTGGGTTTTTCTTTTTGTATATAAACTGAGTGATCGTTCATTCTATTAGTTGAATTTATTTGGGACATTTTGTTTTCTTGTTTTTGTGTATGATGATGAAGCTTAGAAAGAGAGCTTTAATGGAGGCTAATAATAATAATAGAGCTGGAGGAGAAATTAGAAAAGTCCATATTATTTACTTTCTTTCCCGTATGGGACACGTGGAGCAACCCCATCTCATCCGTGTTCATCATCTCGCCGGAGGAAGCGCCGGCGTTTATCTTCGAGGTCTGTGCTCTGGGATTTTTCTAATTTTCTTCATTCGTCTCCTTTCTTGCCATTGAATTATCATTGAAGTTAATGTTATAAATGTATAACATAATTTATGGGCCTTAATGTTTGAATTTAATTGTGATTTTAAATTAGCAGTGTATTAGAACACACGCTATTATTCTTAAATGTTATTTCTTAATCTCTAATTAAAATTTGTTTATTTGTTCAAGTACATCAATTGCAAAAATGAGGAAATAAGTTTTCAACTTAGAGTTCATACTATTATTGATATCTATAATCACTTATTATATCATTTTAGGATTTAAAATTTAAACAGGAGTTGTTTTAGTTCAATTATTGTTGCATGAGTGTGAATGGAAACATCTAACATTTTTAATAAATAAGTTATAATCTTCGAATTGATTTGTTTTCGGCTAATTTAACATCTAACTTATAAATCATAATTAATATGAAATGAATATTTTTCTTTTTTTGTGTGCGTGTGTGTGAAGATGTAAAGAGATGGCTTGGGGAATTGAGAGGAAAGGAAATGGCAGAAGCCTTCTCATGGTCTTACAAAAGGTAA ATGGAGGCTAATAATAATAATAGAGCTGGAGGAGAAATTAGAAAAGTCCATATTATTTACTTTCTTTCCCGTATGGGACACGTGGAGCAACCCCATCTCATCCGTGTTCATCATCTCGCCGGAGGAAGCGCCGGCGTTTATCTTCGAGATGTAAAGAGATGGCTTGGGGAATTGAGAGGAAAGGAAATGGCAGAAGCCTTCTCATGGTCTTACAAAAGGTAA ATGGAGGCTAATAATAATAATAGAGCTGGAGGAGAAATTAGAAAAGTCCATATTATTTACTTTCTTTCCCGTATGGGACACGTGGAGCAACCCCATCTCATCCGTGTTCATCATCTCGCCGGAGGAAGCGCCGGCGTTTATCTTCGAGATGTAAAGAGATGGCTTGGGGAATTGAGAGGAAAGGAAATGGCAGAAGCCTTCTCATGGTCTTACAAAAGGTAA
BLAST of CSPI07G19760 vs. Swiss-Prot
Match: UFC_ARATH (Protein UPSTREAM OF FLC OS=Arabidopsis thaliana GN=UFC PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 3.3e-06 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 1
BLAST of CSPI07G19760 vs. TrEMBL
Match: A0A0A0K8H4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430190 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 3.0e-35 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1
BLAST of CSPI07G19760 vs. TrEMBL
Match: A5ARD3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002153 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 5.1e-22 Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 1
BLAST of CSPI07G19760 vs. TrEMBL
Match: F6GZ24_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0320g00020 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 5.1e-22 Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 1
BLAST of CSPI07G19760 vs. TrEMBL
Match: A0A067D083_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g048680mg PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 6.6e-22 Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 1
BLAST of CSPI07G19760 vs. TrEMBL
Match: A0A068UGS6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024979001 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 3.3e-21 Identity = 48/68 (70.59%), Postives = 59/68 (86.76%), Query Frame = 1
BLAST of CSPI07G19760 vs. TAIR10
Match: AT1G05577.1 (AT1G05577.1 Domain of unknown function (DUF966)) HSP 1 Score: 93.2 bits (230), Expect = 7.2e-20 Identity = 41/68 (60.29%), Postives = 54/68 (79.41%), Query Frame = 1
BLAST of CSPI07G19760 vs. TAIR10
Match: AT2G28150.1 (AT2G28150.1 Domain of unknown function (DUF966)) HSP 1 Score: 57.4 bits (137), Expect = 4.4e-09 Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 1
BLAST of CSPI07G19760 vs. TAIR10
Match: AT5G59790.1 (AT5G59790.1 Domain of unknown function (DUF966)) HSP 1 Score: 57.0 bits (136), Expect = 5.7e-09 Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 1
BLAST of CSPI07G19760 vs. TAIR10
Match: AT5G10150.1 (AT5G10150.1 Domain of unknown function (DUF966)) HSP 1 Score: 52.0 bits (123), Expect = 1.8e-07 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 1
BLAST of CSPI07G19760 vs. TAIR10
Match: AT3G46110.1 (AT3G46110.1 Domain of unknown function (DUF966)) HSP 1 Score: 52.0 bits (123), Expect = 1.8e-07 Identity = 27/60 (45.00%), Postives = 36/60 (60.00%), Query Frame = 1
BLAST of CSPI07G19760 vs. NCBI nr
Match: gi|778728810|ref|XP_004136105.2| (PREDICTED: uncharacterized protein LOC101207468 [Cucumis sativus]) HSP 1 Score: 155.2 bits (391), Expect = 4.4e-35 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1
BLAST of CSPI07G19760 vs. NCBI nr
Match: gi|700189951|gb|KGN45184.1| (hypothetical protein Csa_7G430190 [Cucumis sativus]) HSP 1 Score: 155.2 bits (391), Expect = 4.4e-35 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1
BLAST of CSPI07G19760 vs. NCBI nr
Match: gi|659122595|ref|XP_008461227.1| (PREDICTED: uncharacterized protein LOC103499876 isoform X2 [Cucumis melo]) HSP 1 Score: 143.3 bits (360), Expect = 1.7e-31 Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 1
BLAST of CSPI07G19760 vs. NCBI nr
Match: gi|659122597|ref|XP_008461228.1| (PREDICTED: protein UPSTREAM OF FLC isoform X3 [Cucumis melo]) HSP 1 Score: 143.3 bits (360), Expect = 1.7e-31 Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 1
BLAST of CSPI07G19760 vs. NCBI nr
Match: gi|659122593|ref|XP_008461226.1| (PREDICTED: protein UPSTREAM OF FLC isoform X1 [Cucumis melo]) HSP 1 Score: 143.3 bits (360), Expect = 1.7e-31 Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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