CSPI06G19130 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G19130
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RWP-RK domain protein
Location	Chr6 : 17342940 .. 17343835 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGCAATTTCTACTACAGTATTGTCTGAAGCAAATATTAGAAGATTACAATATGATTCCAGATCCAATGTCCAATTTCTACGATGCCCTTTGTGTTGGAATTGATTGGTTTGAAAATCTCAATACTGATGGTTTCTTTCAACTCTCTCCTGATAATTCTGGTTCGTTTTCTTTTTTTCCTTCCAAATTTTAATTAAAATGTTCAACTCCATTCATCACACCTTTCCATTTTTTCTTCTTCTAATTTTGTGTTTTGCTTCGTTTATTGTTTTTGAAGAAGATGATGAAATGGAACAACCCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCGGAAGAGCAGCCTCCAAGACGACGACCCTCCCTTGCTGCACAGGTTTCGATTCCATTTTACTGTTGTTCTTTTTTACTTTTAATTTATCTAGTACAAAATGGAAAACTAACAGTTCTTTAAACATAATATTCAAATATAAAGAATTGAAAGTTGGTGATTCATTCAAATGTAATTTGTCTGCGCAGCGACAAAGAACGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTTCCAATATCAGAAGCTTCAAAAAAACTGAATGTGTGCAATACTGTATTGAAGAAAATATGCCGTCGGAGCGGTCTTAGCCGGTGGCCTTACAGAAAGGTGTGTGTGTTCTTCTTTATTAATTGTTCGACTACTCTGATTTTCACAGTAAAATGACTTGATAACTTATTTTGAACGACATAGATACGTAGTTACGAGAGACGAATAGCTGCACTGAGAGCCACCATGAATTCAAGCTACGGAGATACGAGAGTTCGAGCTGAAGCCGAGATTGAAAGGGTTCAAAAAGAACTTACTGATTTTTGTGCTCGAATCAGGATTTGA

mRNA sequence

ATGATTCCAGATCCAATGTCCAATTTCTACGATGCCCTTTGTGTTGGAATTGATTGGTTTGAAAATCTCAATACTGATGGTTTCTTTCAACTCTCTCCTGATAATTCTGAAGATGATGAAATGGAACAACCCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCGGAAGAGCAGCCTCCAAGACGACGACCCTCCCTTGCTGCACAGCGACAAAGAACGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTTCCAATATCAGAAGCTTCAAAAAAACTGAATGTGTGCAATACTGTATTGAAGAAAATATGCCGTCGGAGCGGTCTTAGCCGGTGGCCTTACAGAAAGATACGTAGTTACGAGAGACGAATAGCTGCACTGAGAGCCACCATGAATTCAAGCTACGGAGATACGAGAGTTCGAGCTGAAGCCGAGATTGAAAGGGTTCAAAAAGAACTTACTGATTTTTGTGCTCGAATCAGGATTTGA

Coding sequence (CDS)

ATGATTCCAGATCCAATGTCCAATTTCTACGATGCCCTTTGTGTTGGAATTGATTGGTTTGAAAATCTCAATACTGATGGTTTCTTTCAACTCTCTCCTGATAATTCTGAAGATGATGAAATGGAACAACCCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCGGAAGAGCAGCCTCCAAGACGACGACCCTCCCTTGCTGCACAGCGACAAAGAACGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTTCCAATATCAGAAGCTTCAAAAAAACTGAATGTGTGCAATACTGTATTGAAGAAAATATGCCGTCGGAGCGGTCTTAGCCGGTGGCCTTACAGAAAGATACGTAGTTACGAGAGACGAATAGCTGCACTGAGAGCCACCATGAATTCAAGCTACGGAGATACGAGAGTTCGAGCTGAAGCCGAGATTGAAAGGGTTCAAAAAGAACTTACTGATTTTTGTGCTCGAATCAGGATTTGA

Homology

[Close]

BLAST of CSPI06G19130 vs. Swiss-Prot
Match: RKD1_ARATH (Protein RKD1 OS=Arabidopsis thaliana GN=RKD1 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.7e-07
Identity = 23/72 (31.94%), Postives = 46/72 (63.89%), Query Frame = 1


Query: 85  YLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRV 144
           Y ++PI++A+++LN+  T+LKK CR  G+ RWP+RK+ S ++ I+ ++        +   
Sbjct: 136 YFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKELEKMEGEENED 195

Query: 145 RAEAEIERVQKE 157
           +    +E+++KE
Sbjct: 196 KLRNALEKLEKE 207

[Close]

BLAST of CSPI06G19130 vs. Swiss-Prot
Match: NLP7_ARATH (Protein NLP7 OS=Arabidopsis thaliana GN=NLP7 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 8.7e-07
Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 1


Query: 84  EYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG 141
           +Y    + +A+K L VC T +K+ICR+ G+SRWP RKI+   R I  L+  + S  G
Sbjct: 599 QYFTGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKIKKVNRSITKLKRVIESVQG 655

[Close]

BLAST of CSPI06G19130 vs. Swiss-Prot
Match: NLP9_ARATH (Protein NLP9 OS=Arabidopsis thaliana GN=NLP9 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06
Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 1


Query: 77  MTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMN 136
           +++N + +Y    + +A+K L VC T LK+ICR+ G+ RWP RKI    R +  ++  ++
Sbjct: 536 VSLNVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGIMRWPSRKINKVNRSLRKIQTVLD 595

Query: 137 SSYG 141
           S  G
Sbjct: 596 SVQG 599

[Close]

BLAST of CSPI06G19130 vs. Swiss-Prot
Match: NLP4_ARATH (Protein NLP4 OS=Arabidopsis thaliana GN=NLP4 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.3e-06
Identity = 25/78 (32.05%), Postives = 47/78 (60.26%), Query Frame = 1


Query: 66  SLAAQRQRTGR---MTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIR 125
           S+ A+++RT     +T++ + +Y    + +A+K + VC T LK+ICR+ G+ RWP RKI+
Sbjct: 545 SMMAEKKRTKADKTITLDVLRQYFAGSLKDAAKNIGVCPTTLKRICRQHGIQRWPSRKIK 604

Query: 126 SYERRIAALRATMNSSYG 141
                +  ++  ++S  G
Sbjct: 605 KVGHSLQKIQRVIDSVQG 622

[Close]

BLAST of CSPI06G19130 vs. Swiss-Prot
Match: NLP2_ORYSJ (Protein NLP2 OS=Oryza sativa subsp. japonica GN=NLP2 PE=2 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 7.4e-06
Identity = 32/92 (34.78%), Postives = 46/92 (50.00%), Query Frame = 1


Query: 53  PEQPEEQPPRRRPSLAAQRQRTGRMTVNDVW-EYLHLPISEASKKLNVCNTVLKKICRRS 112
           PE  E+  P        +R    +    DV  +Y    + +A+K L VC T LK+ICR  
Sbjct: 543 PELAEQVQPSSIGHAEKKRSTAEKNISLDVLRKYFSGSLKDAAKSLGVCPTTLKRICRHH 602

Query: 113 GLSRWPYRKIRSYERRIAALRATMNSSYGDTR 144
           G+SRWP RKI    R +  ++  +NS +G  R
Sbjct: 603 GISRWPSRKINKVNRSLKKIQTVINSVHGVDR 634

[Close]

BLAST of CSPI06G19130 vs. TrEMBL
Match: A0A0A0KGT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G362990 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.7e-89
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1


Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP
Sbjct: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
           PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK
Sbjct: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 167
           IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
Sbjct: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 166

[Close]

BLAST of CSPI06G19130 vs. TrEMBL
Match: A0A0A0L2U8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646380 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-35
Identity = 90/176 (51.14%), Postives = 118/176 (67.05%), Query Frame = 1


Query: 2   IPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNS-----------EDDEMEQPTPDCQN 61
           +P+P+S+FYD LC+G+DW ++        L P +S           E+ E +Q   + Q+
Sbjct: 8   LPEPLSDFYDILCIGLDWNDD-EAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQS 67

Query: 62  EPPEQPEEQPPRRRPS--LAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKIC 121
            PP  PE    RR P   LA QRQR GRMTVND+ EYLHLPISEA+KK+N+C TV+KKIC
Sbjct: 68  HPP--PEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKIC 127

Query: 122 RRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARI 165
           RRSGL RWPYRK++SY+R++ AL   + S    TR RAEAE+ER+++EL  FCA I
Sbjct: 128 RRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGI 180

[Close]

BLAST of CSPI06G19130 vs. TrEMBL
Match: F8WLA7_CITUN (Putative uncharacterized protein ORF40 OS=Citrus unshiu GN=ORF40 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-31
Identity = 73/162 (45.06%), Postives = 109/162 (67.28%), Query Frame = 1


Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           M+PDP+S+FY+A+CVG+   +NL TD + Q    NS ++EM Q  PD +NE         
Sbjct: 198 MLPDPLSDFYEAVCVGLVLDDNLTTDDYSQPPMTNSGENEMHQ--PDMENEAER------ 257

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
              R SL+AQR+RTG++T+ D+  Y HLPI EA++++ +C TV+KKICRR GL RWP+RK
Sbjct: 258 -TTRTSLSAQRERTGKLTLRDLMIYFHLPIEEAARRMKLCPTVVKKICRRDGLHRWPHRK 317

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCA 163
           I+S +RR++     + S+  + R  A+ EI+R+Q+E+   CA
Sbjct: 318 IKSIQRRMSVASGRLRSNDAEERANAQIEIQRLQEEMAAACA 350

[Close]

BLAST of CSPI06G19130 vs. TrEMBL
Match: A0A067G1W6_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041600mg PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.8e-25
Identity = 62/162 (38.27%), Postives = 95/162 (58.64%), Query Frame = 1


Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           M+PDP+S+FY+A+CVG+   +NL TD +                              QP
Sbjct: 27  MLPDPLSDFYEAVCVGLVLDDNLTTDDY-----------------------------SQP 86

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
           P      + QR+RTG++T+ D+  Y HLPI EA++++ +C TV+KKICRR GL RWP+RK
Sbjct: 87  PMTN---SVQRERTGKLTLRDLMIYFHLPIEEAARRMKLCPTVVKKICRRDGLHRWPHRK 146

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCA 163
           I+S +RR++     + S+  + R  A+ EI+R+Q+E+   CA
Sbjct: 147 IKSIQRRMSVASGRLRSNDAEERANAQIEIQRLQEEMAAACA 156

[Close]

BLAST of CSPI06G19130 vs. TrEMBL
Match: V7ATG7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G080800g PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24
Identity = 68/179 (37.99%), Postives = 103/179 (57.54%), Query Frame = 1


Query: 2   IPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNS---EDDEMEQPTPDCQNEPPEQPEE 61
           + DP+S++YD +C G+DW E+ N DG   LSP NS   E D   +P P+ + EP   PE 
Sbjct: 366 LDDPLSSYYDTICTGLDWVEHYN-DGDDDLSPPNSTEPESDSEPEPEPEPEPEPETIPES 425

Query: 62  QP-------------PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLK 121
            P             P+ + ++A QR+R  +MT+ND+  + HL I +A+ KL+V ++V+K
Sbjct: 426 DPVPEPHNGEASTTKPKPKRNMAVQRKRVPKMTMNDLSPFFHLTIRDAADKLDVSDSVVK 485

Query: 122 KICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARI 165
           KI R   L RWP RK++S  + +  LR  +NS Y  T  R   EI+R+Q+E+   C  +
Sbjct: 486 KISRLGNLKRWPQRKLQSLAKDVRVLRKALNSPYEGTSKRVRQEIQRLQREMVAVCGGV 543

[Close]

BLAST of CSPI06G19130 vs. TAIR10
Match: AT1G18790.1 (AT1G18790.1 RWP-RK domain-containing protein)

HSP 1 Score: 55.1 bits (131), Expect = 4.9e-08
Identity = 23/72 (31.94%), Postives = 46/72 (63.89%), Query Frame = 1


Query: 85  YLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRV 144
           Y ++PI++A+++LN+  T+LKK CR  G+ RWP+RK+ S ++ I+ ++        +   
Sbjct: 136 YFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKELEKMEGEENED 195

Query: 145 RAEAEIERVQKE 157
           +    +E+++KE
Sbjct: 196 KLRNALEKLEKE 207

[Close]

BLAST of CSPI06G19130 vs. TAIR10
Match: AT4G24020.1 (AT4G24020.1 NIN like protein 7)

HSP 1 Score: 55.1 bits (131), Expect = 4.9e-08
Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 1


Query: 84  EYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG 141
           +Y    + +A+K L VC T +K+ICR+ G+SRWP RKI+   R I  L+  + S  G
Sbjct: 599 QYFTGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKIKKVNRSITKLKRVIESVQG 655

[Close]

BLAST of CSPI06G19130 vs. TAIR10
Match: AT3G59580.1 (AT3G59580.1 Plant regulator RWP-RK family protein)

HSP 1 Score: 54.7 bits (130), Expect = 6.4e-08
Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 1


Query: 77  MTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMN 136
           +++N + +Y    + +A+K L VC T LK+ICR+ G+ RWP RKI    R +  ++  ++
Sbjct: 536 VSLNVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGIMRWPSRKINKVNRSLRKIQTVLD 595

Query: 137 SSYG 141
           S  G
Sbjct: 596 SVQG 599

[Close]

BLAST of CSPI06G19130 vs. TAIR10
Match: AT1G20640.1 (AT1G20640.1 Plant regulator RWP-RK family protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.4e-07
Identity = 25/78 (32.05%), Postives = 47/78 (60.26%), Query Frame = 1


Query: 66  SLAAQRQRTGR---MTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIR 125
           S+ A+++RT     +T++ + +Y    + +A+K + VC T LK+ICR+ G+ RWP RKI+
Sbjct: 545 SMMAEKKRTKADKTITLDVLRQYFAGSLKDAAKNIGVCPTTLKRICRQHGIQRWPSRKIK 604

Query: 126 SYERRIAALRATMNSSYG 141
                +  ++  ++S  G
Sbjct: 605 KVGHSLQKIQRVIDSVQG 622

[Close]

BLAST of CSPI06G19130 vs. TAIR10
Match: AT2G17150.1 (AT2G17150.1 Plant regulator RWP-RK family protein)

HSP 1 Score: 51.6 bits (122), Expect = 5.4e-07
Identity = 25/78 (32.05%), Postives = 42/78 (53.85%), Query Frame = 1


Query: 63  RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIR 122
           RRP    + +    + +  + +Y    + +A+K + VC T LK+ICR+ G+ RWP RKI+
Sbjct: 595 RRPGEKKRAKTEKTIGLEVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGIMRWPSRKIK 654

Query: 123 SYERRIAALRATMNSSYG 141
                +  L+  M+S  G
Sbjct: 655 KVGHSLKKLQLVMDSVQG 672

[Close]

BLAST of CSPI06G19130 vs. NCBI nr
Match: gi|778722257|ref|XP_011658444.1| (PREDICTED: protein RKD2-like [Cucumis sativus])

HSP 1 Score: 336.7 bits (862), Expect = 2.4e-89
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1


Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP
Sbjct: 195 MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 254

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
           PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK
Sbjct: 255 PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 314

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 167
           IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
Sbjct: 315 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 360

[Close]

BLAST of CSPI06G19130 vs. NCBI nr
Match: gi|700192388|gb|KGN47592.1| (hypothetical protein Csa_6G362990 [Cucumis sativus])

HSP 1 Score: 336.7 bits (862), Expect = 2.4e-89
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1


Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP
Sbjct: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
           PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK
Sbjct: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 167
           IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
Sbjct: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 166

[Close]

BLAST of CSPI06G19130 vs. NCBI nr
Match: gi|659089471|ref|XP_008445526.1| (PREDICTED: protein RKD2-like isoform X1 [Cucumis melo])

HSP 1 Score: 323.6 bits (828), Expect = 2.1e-85
Identity = 162/166 (97.59%), Postives = 163/166 (98.19%), Query Frame = 1


Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSED+EMEQ TPDCQNEPPEQPEEQP
Sbjct: 206 MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDEEMEQTTPDCQNEPPEQPEEQP 265

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
           P RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK
Sbjct: 266 P-RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 325

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 167
           IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKEL DFCARIRI
Sbjct: 326 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFCARIRI 370

[Close]

BLAST of CSPI06G19130 vs. NCBI nr
Match: gi|659089473|ref|XP_008445527.1| (PREDICTED: uncharacterized protein LOC103488516 isoform X2 [Cucumis melo])

HSP 1 Score: 317.4 bits (812), Expect = 1.5e-83
Identity = 161/166 (96.99%), Postives = 162/166 (97.59%), Query Frame = 1


Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNS D+EMEQ TPDCQNEPPEQPEEQP
Sbjct: 206 MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNS-DEEMEQTTPDCQNEPPEQPEEQP 265

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
           P RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK
Sbjct: 266 P-RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 325

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 167
           IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKEL DFCARIRI
Sbjct: 326 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFCARIRI 369

[Close]

BLAST of CSPI06G19130 vs. NCBI nr
Match: gi|778697847|ref|XP_004141337.2| (PREDICTED: uncharacterized protein LOC101213670 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-35
Identity = 90/176 (51.14%), Postives = 118/176 (67.05%), Query Frame = 1


Query: 2   IPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNS-----------EDDEMEQPTPDCQN 61
           +P+P+S+FYD LC+G+DW ++        L P +S           E+ E +Q   + Q+
Sbjct: 215 LPEPLSDFYDILCIGLDWNDD-EAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQS 274

Query: 62  EPPEQPEEQPPRRRPS--LAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKIC 121
            PP  PE    RR P   LA QRQR GRMTVND+ EYLHLPISEA+KK+N+C TV+KKIC
Sbjct: 275 HPP--PEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKIC 334

Query: 122 RRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARI 165
           RRSGL RWPYRK++SY+R++ AL   + S    TR RAEAE+ER+++EL  FCA I
Sbjct: 335 RRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGI 387

The following BLAST results are available for this feature:

BLAST of CSPI06G19130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RKD1_ARATH	8.7e-07	31.94	Protein RKD1 OS=Arabidopsis thaliana GN=RKD1 PE=3 SV=1	[more]
NLP7_ARATH	8.7e-07	42.11	Protein NLP7 OS=Arabidopsis thaliana GN=NLP7 PE=1 SV=2	[more]
NLP9_ARATH	1.1e-06	35.94	Protein NLP9 OS=Arabidopsis thaliana GN=NLP9 PE=2 SV=1	[more]
NLP4_ARATH	4.3e-06	32.05	Protein NLP4 OS=Arabidopsis thaliana GN=NLP4 PE=2 SV=1	[more]
NLP2_ORYSJ	7.4e-06	34.78	Protein NLP2 OS=Oryza sativa subsp. japonica GN=NLP2 PE=2 SV=2	[more]

BLAST of CSPI06G19130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGT8_CUCSA	1.7e-89	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G362990 PE=4 SV=1	[more]
A0A0A0L2U8_CUCSA	1.1e-35	51.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646380 PE=4 SV=1	[more]
F8WLA7_CITUN	2.1e-31	45.06	Putative uncharacterized protein ORF40 OS=Citrus unshiu GN=ORF40 PE=4 SV=1	[more]
A0A067G1W6_CITSI	3.8e-25	38.27	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041600mg PE=4 S...	[more]
V7ATG7_PHAVU	1.1e-24	37.99	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G080800g PE=4 SV=1	[more]

BLAST of CSPI06G19130 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18790.1	4.9e-08	31.94	RWP-RK domain-containing protein	[more]
AT4G24020.1	4.9e-08	42.11	NIN like protein 7	[more]
AT3G59580.1	6.4e-08	35.94	Plant regulator RWP-RK family protein	[more]
AT1G20640.1	2.4e-07	32.05	Plant regulator RWP-RK family protein	[more]
AT2G17150.1	5.4e-07	32.05	Plant regulator RWP-RK family protein	[more]

BLAST of CSPI06G19130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722257\|ref\|XP_011658444.1\|	2.4e-89	100.00	PREDICTED: protein RKD2-like [Cucumis sativus]	[more]
gi\|700192388\|gb\|KGN47592.1\|	2.4e-89	100.00	hypothetical protein Csa_6G362990 [Cucumis sativus]	[more]
gi\|659089471\|ref\|XP_008445526.1\|	2.1e-85	97.59	PREDICTED: protein RKD2-like isoform X1 [Cucumis melo]	[more]
gi\|659089473\|ref\|XP_008445527.1\|	1.5e-83	96.99	PREDICTED: uncharacterized protein LOC103488516 isoform X2 [Cucumis melo]	[more]
gi\|778697847\|ref\|XP_004141337.2\|	1.5e-35	51.14	PREDICTED: uncharacterized protein LOC101213670 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003035	RWP-RK_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G19130.1	CSPI06G19130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 77..123 score: 3.6
IPR003035	RWP-RK domain	PROFILE	PS51519	RWP_RK	coord: 64..144 score: 17
None	No IPR available	unknown	Coil	Coil	coord: 143..166 scor
None	No IPR available	PANTHER	PTHR32002	FAMILY NOT NAMED	coord: 1..159 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G19130	Csa6G362990	Cucumber (Chinese Long) v2	cpicuB313
CSPI06G19130	MELO3C011480	Melon (DHL92) v3.5.1	cpimeB464
CSPI06G19130	Lsi08G008400	Bottle gourd (USVL1VR-Ls)	cpilsiB478
CSPI06G19130	Bhi04G001179	Wax gourd	cpiwgoB592
CSPI06G19130	CsGy6G018570	Cucumber (Gy14) v2	cgybcpiB287

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G19130	Cucurbita pepo (Zucchini)	cpecpiB117
CSPI06G19130	Cucurbita pepo (Zucchini)	cpecpiB844
CSPI06G19130	Melon (DHL92) v3.6.1	cpimedB456
CSPI06G19130	Silver-seed gourd	carcpiB0163
CSPI06G19130	Cucumber (Chinese Long) v3	cpicucB363
CSPI06G19130	Watermelon (97103) v2	cpiwmbB513
CSPI06G19130	Cucumber (Gy14) v1	cgycpiB042
CSPI06G19130	Cucurbita maxima (Rimu)	cmacpiB198
CSPI06G19130	Cucurbita maxima (Rimu)	cmacpiB816
CSPI06G19130	Cucurbita moschata (Rifu)	cmocpiB183
CSPI06G19130	Cucurbita moschata (Rifu)	cmocpiB800
CSPI06G19130	Watermelon (Charleston Gray)	cpiwcgB522
CSPI06G19130	Watermelon (97103) v1	cpiwmB471