MELO3C011480 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C011480
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	RWP-RK domain protein
Location	chr3 : 23481298 .. 23481921 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAAACCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCGGAGGAGCAGCCTCCAAGACGACCCTCCCTTGCTGCACAGGTTTCTTTTTATAATTTCTCTCACTGTAGAATATTTTACTATTTTCTTTTTACTTTAAGTTTCGTACAAAATTGAAAACTAACGATTCTTTAGACATAATATTCAAATATAAAGAATTGCAAGTTGGTGATTCATTAATGATTAAATGTAATTTGTCTGCAGCGACAAAGGACGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTACCAATATCAGAAGCTTCAAAAAAACTGAATGTGTGTAATACAGTATTGAAGAAAATATGCCGTCGGAGCGGTCTTAGCCGGTGGCCTTACAGAAAGGTGTTTGTGTGGTTTTGTTTATTAATTTCTGCTCTTATTTTCACACACACATCTATGACCAACGACTCATTTTGAACGACATAGATACGTAGTTATGAGAGGCGAATAGCAGCACTGAGAGCCACCATGAATTCAAGCTACGGAGATACGAGAGTTCGAGCCGAAGCCGAGATCGAAAGGGTTCAAAAAGAACTTGCTGATTTTTGTGCACGAATCAGGATTTGA

mRNA sequence

ATGGAACAAACCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCGGAGGAGCAGCCTCCAAGACGACCCTCCCTTGCTGCACAGCGACAAAGGACGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTACCAATATCAGAAGCTTCAAAAAAACTGAATGTGTGTAATACAGTATTGAAGAAAATATGCCGTCGGAGCGGTCTTAGCCGGTGGCCTTACAGAAAGATACGTAGTTATGAGAGGCGAATAGCAGCACTGAGAGCCACCATGAATTCAAGCTACGGAGATACGAGAGTTCGAGCCGAAGCCGAGATCGAAAGGGTTCAAAAAGAACTTGCTGATTTTTGTGCACGAATCAGGATTTGA

Coding sequence (CDS)

ATGGAACAAACCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCGGAGGAGCAGCCTCCAAGACGACCCTCCCTTGCTGCACAGCGACAAAGGACGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTACCAATATCAGAAGCTTCAAAAAAACTGAATGTGTGTAATACAGTATTGAAGAAAATATGCCGTCGGAGCGGTCTTAGCCGGTGGCCTTACAGAAAGATACGTAGTTATGAGAGGCGAATAGCAGCACTGAGAGCCACCATGAATTCAAGCTACGGAGATACGAGAGTTCGAGCCGAAGCCGAGATCGAAAGGGTTCAAAAAGAACTTGCTGATTTTTGTGCACGAATCAGGATTTGA

Protein sequence

MEQTTPDCQNEPPEQPEEQPPRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFCARIRI*

Homology

[Close]

BLAST of MELO3C011480 vs. Swiss-Prot
Match: NLP2_ORYSJ (Protein NLP2 OS=Oryza sativa subsp. japonica GN=NLP2 PE=2 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-08
Identity = 33/92 (35.87%), Postives = 48/92 (52.17%), Query Frame = 1


Query: 13  PEQPEEQPPRRPSLAAQRQRTGRMTVN-DVW-EYLHLPISEASKKLNVCNTVLKKICRRS 72
           PE  E+  P     A +++ T    ++ DV  +Y    + +A+K L VC T LK+ICR  
Sbjct: 543 PELAEQVQPSSIGHAEKKRSTAEKNISLDVLRKYFSGSLKDAAKSLGVCPTTLKRICRHH 602

Query: 73  GLSRWPYRKIRSYERRIAALRATMNSSYGDTR 103
           G+SRWP RKI    R +  ++  +NS +G  R
Sbjct: 603 GISRWPSRKINKVNRSLKKIQTVINSVHGVDR 634

[Close]

BLAST of MELO3C011480 vs. Swiss-Prot
Match: RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana GN=RKD3 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.5e-08
Identity = 28/79 (35.44%), Postives = 50/79 (63.29%), Query Frame = 1


Query: 43  EYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDT- 102
           +Y ++PI++A+K+LN+  T+LKK CR  G+ RWP+RK+ S    IA L+  + ++ G T 
Sbjct: 166 QYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTKGRTP 225

Query: 103 --RVRAEAEIERVQKELAD 119
             ++R   E+  ++K++ +
Sbjct: 226 KSKLRNALELLEMEKKMIE 244

[Close]

BLAST of MELO3C011480 vs. Swiss-Prot
Match: RKD1_ARATH (Protein RKD1 OS=Arabidopsis thaliana GN=RKD1 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-07
Identity = 23/72 (31.94%), Postives = 44/72 (61.11%), Query Frame = 1


Query: 44  YLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRV 103
           Y ++PI++A+++LN+  T+LKK CR  G+ RWP+RK+ S ++ I+ ++        +   
Sbjct: 136 YFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKELEKMEGEENED 195

Query: 104 RAEAEIERVQKE 116
           +    +E+++KE
Sbjct: 196 KLRNALEKLEKE 207

[Close]

BLAST of MELO3C011480 vs. Swiss-Prot
Match: NLP3_ORYSJ (Protein NLP3 OS=Oryza sativa subsp. japonica GN=NLP3 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.0e-07
Identity = 30/90 (33.33%), Postives = 43/90 (47.78%), Query Frame = 1


Query: 10  NEPPEQPEEQPPRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRR 69
           N+PPE+   +  +  SL   +Q            Y    +  A+K L VC T +K+ICR+
Sbjct: 585 NKPPERRRGKAEKTISLDVLQQ------------YFSGSLKNAAKSLGVCPTTMKRICRQ 644

Query: 70  SGLSRWPYRKIRSYERRIAALRATMNSSYG 100
            G+SRWP RKI    R ++ L+  + S  G
Sbjct: 645 HGISRWPSRKINKVNRSLSKLKQVIESVQG 662

[Close]

BLAST of MELO3C011480 vs. Swiss-Prot
Match: NLP7_ARATH (Protein NLP7 OS=Arabidopsis thaliana GN=NLP7 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 6.6e-07
Identity = 24/57 (42.11%), Postives = 33/57 (57.89%), Query Frame = 1


Query: 43  EYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG 100
           +Y    + +A+K L VC T +K+ICR+ G+SRWP RKI+   R I  L+  + S  G
Sbjct: 599 QYFTGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKIKKVNRSITKLKRVIESVQG 655

[Close]

BLAST of MELO3C011480 vs. TrEMBL
Match: A0A0A0KGT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G362990 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-63
Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 1


Query: 1   MEQTTPDCQNEPPEQPEEQPP-RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC 60
           MEQ TPDCQNEPPEQPEEQPP RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
Sbjct: 41  MEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC 100

Query: 61  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADF 120
           NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKEL DF
Sbjct: 101 NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDF 160

Query: 121 CARIRI 126
           CARIRI
Sbjct: 161 CARIRI 166

[Close]

BLAST of MELO3C011480 vs. TrEMBL
Match: A0A0A0L2U8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646380 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.5e-31
Identity = 72/124 (58.06%), Postives = 93/124 (75.00%), Query Frame = 1


Query: 2   EQTTPDCQNEPPEQP--EEQPPRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC 61
           +Q   + Q+ PP +     + P+ P LA QRQR GRMTVND+ EYLHLPISEA+KK+N+C
Sbjct: 58  QQIQMEKQSHPPPEVGGSRRVPQTP-LARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLC 117

Query: 62  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADF 121
            TV+KKICRRSGL RWPYRK++SY+R++ AL   + S    TR RAEAE+ER+++ELA F
Sbjct: 118 LTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQF 177

Query: 122 CARI 124
           CA I
Sbjct: 178 CAGI 180

[Close]

BLAST of MELO3C011480 vs. TrEMBL
Match: F8WLA7_CITUN (Putative uncharacterized protein ORF40 OS=Citrus unshiu GN=ORF40 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.8e-23
Identity = 51/112 (45.54%), Postives = 80/112 (71.43%), Query Frame = 1


Query: 10  NEPPEQPEEQPPRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRR 69
           ++P  + E +   R SL+AQR+RTG++T+ D+  Y HLPI EA++++ +C TV+KKICRR
Sbjct: 239 HQPDMENEAERTTRTSLSAQRERTGKLTLRDLMIYFHLPIEEAARRMKLCPTVVKKICRR 298

Query: 70  SGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFCA 122
            GL RWP+RKI+S +RR++     + S+  + R  A+ EI+R+Q+E+A  CA
Sbjct: 299 DGLHRWPHRKIKSIQRRMSVASGRLRSNDAEERANAQIEIQRLQEEMAAACA 350

[Close]

BLAST of MELO3C011480 vs. TrEMBL
Match: A0A087G7J5_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G169800 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 8.6e-22
Identity = 53/110 (48.18%), Postives = 79/110 (71.82%), Query Frame = 1


Query: 10  NEPPEQPEEQPPRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRR 69
           +EPP+  + +P R   L+AQR RTG++T++D+ +Y HLPI +A++ + VC TVLKK+CRR
Sbjct: 332 DEPPKPAKVRPRRNTPLSAQRLRTGKLTLDDLKKYFHLPIEKAAQTMEVCPTVLKKVCRR 391

Query: 70  SGLSRWPYRKIRSYERRIAALRA-TMNSSYGDTRVRAEAEIERVQKELAD 119
            GL RWPYRKI+S E+RIAALR   + +     R  AE EI ++++E+ +
Sbjct: 392 GGLRRWPYRKIKSLEKRIAALRKFALATEVAAIRETAEKEIAKLEEEIKE 441

[Close]

BLAST of MELO3C011480 vs. TrEMBL
Match: A0A067G1W6_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041600mg PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-20
Identity = 49/103 (47.57%), Postives = 74/103 (71.84%), Query Frame = 1


Query: 19  QPPRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYR 78
           QPP   S+  QR+RTG++T+ D+  Y HLPI EA++++ +C TV+KKICRR GL RWP+R
Sbjct: 56  QPPMTNSV--QRERTGKLTLRDLMIYFHLPIEEAARRMKLCPTVVKKICRRDGLHRWPHR 115

Query: 79  KIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFCA 122
           KI+S +RR++     + S+  + R  A+ EI+R+Q+E+A  CA
Sbjct: 116 KIKSIQRRMSVASGRLRSNDAEERANAQIEIQRLQEEMAAACA 156

[Close]

BLAST of MELO3C011480 vs. TAIR10
Match: AT5G66990.1 (AT5G66990.1 RWP-RK domain-containing protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-09
Identity = 28/79 (35.44%), Postives = 50/79 (63.29%), Query Frame = 1


Query: 43  EYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDT- 102
           +Y ++PI++A+K+LN+  T+LKK CR  G+ RWP+RK+ S    IA L+  + ++ G T 
Sbjct: 166 QYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTKGRTP 225

Query: 103 --RVRAEAEIERVQKELAD 119
             ++R   E+  ++K++ +
Sbjct: 226 KSKLRNALELLEMEKKMIE 244

[Close]

BLAST of MELO3C011480 vs. TAIR10
Match: AT1G18790.1 (AT1G18790.1 RWP-RK domain-containing protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.2e-08
Identity = 23/72 (31.94%), Postives = 44/72 (61.11%), Query Frame = 1


Query: 44  YLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRV 103
           Y ++PI++A+++LN+  T+LKK CR  G+ RWP+RK+ S ++ I+ ++        +   
Sbjct: 136 YFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKELEKMEGEENED 195

Query: 104 RAEAEIERVQKE 116
           +    +E+++KE
Sbjct: 196 KLRNALEKLEKE 207

[Close]

BLAST of MELO3C011480 vs. TAIR10
Match: AT4G24020.1 (AT4G24020.1 NIN like protein 7)

HSP 1 Score: 55.1 bits (131), Expect = 3.7e-08
Identity = 24/57 (42.11%), Postives = 33/57 (57.89%), Query Frame = 1


Query: 43  EYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG 100
           +Y    + +A+K L VC T +K+ICR+ G+SRWP RKI+   R I  L+  + S  G
Sbjct: 599 QYFTGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKIKKVNRSITKLKRVIESVQG 655

[Close]

BLAST of MELO3C011480 vs. TAIR10
Match: AT5G53040.1 (AT5G53040.1 RWP-RK domain-containing protein)

HSP 1 Score: 54.7 bits (130), Expect = 4.8e-08
Identity = 24/63 (38.10%), Postives = 41/63 (65.08%), Query Frame = 1


Query: 29  QRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIA 88
           +++R  ++ ++++ ++   PI +A+K+LNV  TVLKK CR  G+ RWP+RK++S    I 
Sbjct: 141 KKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIK 200

Query: 89  ALR 92
            L+
Sbjct: 201 NLK 203

[Close]

BLAST of MELO3C011480 vs. TAIR10
Match: AT3G59580.1 (AT3G59580.1 Plant regulator RWP-RK family protein)

HSP 1 Score: 54.3 bits (129), Expect = 6.3e-08
Identity = 23/64 (35.94%), Postives = 37/64 (57.81%), Query Frame = 1


Query: 36  MTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMN 95
           +++N + +Y    + +A+K L VC T LK+ICR+ G+ RWP RKI    R +  ++  ++
Sbjct: 536 VSLNVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGIMRWPSRKINKVNRSLRKIQTVLD 595

Query: 96  SSYG 100
           S  G
Sbjct: 596 SVQG 599

[Close]

BLAST of MELO3C011480 vs. NCBI nr
Match: gi|659089471|ref|XP_008445526.1| (PREDICTED: protein RKD2-like isoform X1 [Cucumis melo])

HSP 1 Score: 257.3 bits (656), Expect = 1.4e-65
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1


Query: 1   MEQTTPDCQNEPPEQPEEQPPRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCN 60
           MEQTTPDCQNEPPEQPEEQPPRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCN
Sbjct: 246 MEQTTPDCQNEPPEQPEEQPPRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCN 305

Query: 61  TVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFC 120
           TVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFC
Sbjct: 306 TVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFC 365

Query: 121 ARIRI 126
           ARIRI
Sbjct: 366 ARIRI 370

[Close]

BLAST of MELO3C011480 vs. NCBI nr
Match: gi|659089473|ref|XP_008445527.1| (PREDICTED: uncharacterized protein LOC103488516 isoform X2 [Cucumis melo])

HSP 1 Score: 257.3 bits (656), Expect = 1.4e-65
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1


Query: 1   MEQTTPDCQNEPPEQPEEQPPRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCN 60
           MEQTTPDCQNEPPEQPEEQPPRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCN
Sbjct: 245 MEQTTPDCQNEPPEQPEEQPPRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCN 304

Query: 61  TVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFC 120
           TVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFC
Sbjct: 305 TVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFC 364

Query: 121 ARIRI 126
           ARIRI
Sbjct: 365 ARIRI 369

[Close]

BLAST of MELO3C011480 vs. NCBI nr
Match: gi|778722257|ref|XP_011658444.1| (PREDICTED: protein RKD2-like [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 5.0e-63
Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 1


Query: 1   MEQTTPDCQNEPPEQPEEQPP-RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC 60
           MEQ TPDCQNEPPEQPEEQPP RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
Sbjct: 235 MEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC 294

Query: 61  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADF 120
           NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKEL DF
Sbjct: 295 NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDF 354

Query: 121 CARIRI 126
           CARIRI
Sbjct: 355 CARIRI 360

[Close]

BLAST of MELO3C011480 vs. NCBI nr
Match: gi|700192388|gb|KGN47592.1| (hypothetical protein Csa_6G362990 [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 5.0e-63
Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 1


Query: 1   MEQTTPDCQNEPPEQPEEQPP-RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC 60
           MEQ TPDCQNEPPEQPEEQPP RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
Sbjct: 41  MEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC 100

Query: 61  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADF 120
           NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKEL DF
Sbjct: 101 NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDF 160

Query: 121 CARIRI 126
           CARIRI
Sbjct: 161 CARIRI 166

[Close]

BLAST of MELO3C011480 vs. NCBI nr
Match: gi|778697847|ref|XP_004141337.2| (PREDICTED: uncharacterized protein LOC101213670 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 5.0e-31
Identity = 72/124 (58.06%), Postives = 93/124 (75.00%), Query Frame = 1


Query: 2   EQTTPDCQNEPPEQP--EEQPPRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC 61
           +Q   + Q+ PP +     + P+ P LA QRQR GRMTVND+ EYLHLPISEA+KK+N+C
Sbjct: 265 QQIQMEKQSHPPPEVGGSRRVPQTP-LARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLC 324

Query: 62  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADF 121
            TV+KKICRRSGL RWPYRK++SY+R++ AL   + S    TR RAEAE+ER+++ELA F
Sbjct: 325 LTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQF 384

Query: 122 CARI 124
           CA I
Sbjct: 385 CAGI 387

The following BLAST results are available for this feature:

BLAST of MELO3C011480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NLP2_ORYSJ	1.6e-08	35.87	Protein NLP2 OS=Oryza sativa subsp. japonica GN=NLP2 PE=2 SV=2	[more]
RKD3_ARATH	3.5e-08	35.44	Protein RKD3 OS=Arabidopsis thaliana GN=RKD3 PE=3 SV=1	[more]
RKD1_ARATH	3.9e-07	31.94	Protein RKD1 OS=Arabidopsis thaliana GN=RKD1 PE=3 SV=1	[more]
NLP3_ORYSJ	5.0e-07	33.33	Protein NLP3 OS=Oryza sativa subsp. japonica GN=NLP3 PE=3 SV=1	[more]
NLP7_ARATH	6.6e-07	42.11	Protein NLP7 OS=Arabidopsis thaliana GN=NLP7 PE=1 SV=2	[more]

BLAST of MELO3C011480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGT8_CUCSA	3.5e-63	97.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G362990 PE=4 SV=1	[more]
A0A0A0L2U8_CUCSA	3.5e-31	58.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646380 PE=4 SV=1	[more]
F8WLA7_CITUN	7.8e-23	45.54	Putative uncharacterized protein ORF40 OS=Citrus unshiu GN=ORF40 PE=4 SV=1	[more]
A0A087G7J5_ARAAL	8.6e-22	48.18	Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G169800 PE=4 SV=1	[more]
A0A067G1W6_CITSI	1.2e-20	47.57	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041600mg PE=4 S...	[more]

BLAST of MELO3C011480 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G66990.1	2.0e-09	35.44	RWP-RK domain-containing protein	[more]
AT1G18790.1	2.2e-08	31.94	RWP-RK domain-containing protein	[more]
AT4G24020.1	3.7e-08	42.11	NIN like protein 7	[more]
AT5G53040.1	4.8e-08	38.10	RWP-RK domain-containing protein	[more]
AT3G59580.1	6.3e-08	35.94	Plant regulator RWP-RK family protein	[more]

BLAST of MELO3C011480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089471\|ref\|XP_008445526.1\|	1.4e-65	100.00	PREDICTED: protein RKD2-like isoform X1 [Cucumis melo]	[more]
gi\|659089473\|ref\|XP_008445527.1\|	1.4e-65	100.00	PREDICTED: uncharacterized protein LOC103488516 isoform X2 [Cucumis melo]	[more]
gi\|778722257\|ref\|XP_011658444.1\|	5.0e-63	97.62	PREDICTED: protein RKD2-like [Cucumis sativus]	[more]
gi\|700192388\|gb\|KGN47592.1\|	5.0e-63	97.62	hypothetical protein Csa_6G362990 [Cucumis sativus]	[more]
gi\|778697847\|ref\|XP_004141337.2\|	5.0e-31	58.06	PREDICTED: uncharacterized protein LOC101213670 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003035	RWP-RK_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0042393	histone binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011480T1	MELO3C011480T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 36..82 score: 2.0
IPR003035	RWP-RK domain	PROFILE	PS51519	RWP_RK	coord: 23..103 score: 17
None	No IPR available	unknown	Coil	Coil	coord: 102..122 scor
None	No IPR available	PANTHER	PTHR32002	FAMILY NOT NAMED	coord: 20..118 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C011480	Csa6G362990	Cucumber (Chinese Long) v2	cumeB466
MELO3C011480	Cla021976	Watermelon (97103) v1	mewmB301
MELO3C011480	ClCG08G009910	Watermelon (Charleston Gray)	mewcgB296
MELO3C011480	Cla97C08G152700	Watermelon (97103) v2	mewmbB303
MELO3C011480	Bhi04G001179	Wax gourd	mewgoB342
MELO3C011480	CSPI06G19130	Wild cucumber (PI 183967)	cpimeB464
MELO3C011480	Cucsa.056080	Cucumber (Gy14) v1	cgymeB040
MELO3C011480	CmaCh12G006570	Cucurbita maxima (Rimu)	cmameB164
MELO3C011480	CmoCh12G005970	Cucurbita moschata (Rifu)	cmomeB153
MELO3C011480	Lsi08G008400	Bottle gourd (USVL1VR-Ls)	lsimeB470
MELO3C011480	CsGy6G018570	Cucumber (Gy14) v2	cgybmeB406
MELO3C011480	CsaV3_6G032010	Cucumber (Chinese Long) v3	cucmeB475

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C011480	Cucurbita maxima (Rimu)	cmameB724
MELO3C011480	Cucurbita moschata (Rifu)	cmomeB715
MELO3C011480	Cucurbita pepo (Zucchini)	cpemeB088
MELO3C011480	Cucurbita pepo (Zucchini)	cpemeB763
MELO3C011480	Silver-seed gourd	carmeB0142