Csa6G362990 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G362990
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRWP-RK domain-containing protein; contains IPR003035 (RWP-RK domain)
LocationChr6 : 16395433 .. 16396325 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAATTTCTACTACAGTATTGTCTGAAGCAAATATTAGAAGATTACAATATGATTCCAGATCCAATGTCCAATTTCTACGATGCCCTTTGTGTTGGAATTGATTGGTTTGAAAATCTCAATACTGATGGTTTCTTTCAACTCTCTCCTGATAATTCTGGTTCGTTTTCTTTTTTTCCTTCCAAATTTTAATTAAAATGTTCAACTCCATTCATCACACCTTTCCATTTTTTCTTCTTCTAATTTTGTGTTTTGCTTCGTTTATTGTTTTTGAAGAAGATGATGAAATGGAACAACCCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCGGAAGAGCAGCCTCCAAGACGACGACCCTCCCTTGCTGCACAGGTTTCGATTCCATTTTACTGTTGTTCTTTTTTACTTTTAATTTATCTAGTACAAAATGGAAAACTAACAGTTCTTTAAACATAATATTCAAATATAAAGAATTGAAAGTTGGTGATTCATTCAAATGTAATTTGTCTGCGCAGCGACAAAGAACGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTTCCAATATCAGAAGCTTCAAAAAAACTGAATGTGTGCAATACTGTATTGAAGAAAATATGCCGTCGGAGCGGTCTTAGCCGGTGGCCTTACAGAAAGGTGTGTGTGTTCTTCTTTATTAATTGTTCGACTACTCTGATTTTCACAGTAAAATGACTTGATAACTTATTTTGAACGACATAGATACGTAGTTACGAGAGACGAATAGCTGCACTGAGAGCCACCATGAATTCAAGCTACGGAGATACGAGAGTTCGAGCTGAAGCCGAGATTGAAAGGGTTCAAAAAGAACTTACTGATTTTTGTGCTCGAATCAGGATTTGA

mRNA sequence

ATGATTCCAGATCCAATGTCCAATTTCTACGATGCCCTTTGTGTTGGAATTGATTGGTTTGAAAATCTCAATACTGATGGTTTCTTTCAACTCTCTCCTGATAATTCTGAAGATGATGAAATGGAACAACCCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCGGAAGAGCAGCCTCCAAGACGACGACCCTCCCTTGCTGCACAGCGACAAAGAACGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTTCCAATATCAGAAGCTTCAAAAAAACTGAATGTGTGCAATACTGTATTGAAGAAAATATGCCGTCGGAGCGGTCTTAGCCGGTGGCCTTACAGAAAGATACGTAGTTACGAGAGACGAATAGCTGCACTGAGAGCCACCATGAATTCAAGCTACGGAGATACGAGAGTTCGAGCTGAAGCCGAGATTGAAAGGGTTCAAAAAGAACTTACTGATTTTTGTGCTCGAATCAGGATTTGA

Coding sequence (CDS)

ATGATTCCAGATCCAATGTCCAATTTCTACGATGCCCTTTGTGTTGGAATTGATTGGTTTGAAAATCTCAATACTGATGGTTTCTTTCAACTCTCTCCTGATAATTCTGAAGATGATGAAATGGAACAACCCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCGGAAGAGCAGCCTCCAAGACGACGACCCTCCCTTGCTGCACAGCGACAAAGAACGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTTCCAATATCAGAAGCTTCAAAAAAACTGAATGTGTGCAATACTGTATTGAAGAAAATATGCCGTCGGAGCGGTCTTAGCCGGTGGCCTTACAGAAAGATACGTAGTTACGAGAGACGAATAGCTGCACTGAGAGCCACCATGAATTCAAGCTACGGAGATACGAGAGTTCGAGCTGAAGCCGAGATTGAAAGGGTTCAAAAAGAACTTACTGATTTTTGTGCTCGAATCAGGATTTGA

Protein sequence

MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI*
Homology
[Close]
BLAST of Csa6G362990 vs. Swiss-Prot
Match: RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana GN=RKD3 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-08
Identity = 43/162 (26.54%), Postives = 81/162 (50.00%), Query Frame = 1 

Query: 12  ALCVGIDWFENLNTDGFFQLSPDNSE--------DDEMEQPTPDCQNEPPEQPEEQPPRR 71
           +L +   W+   N +   Q+ P+  E        D  MEQ      +E     +E+  ++
Sbjct: 87  SLDISSGWWNENNGNYNNQVEPNLDEISRTNTMGDPNMEQ----ILHEDVNTMKEKTSQK 146

Query: 72  RPSLAAQRQRTG---RMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 131
           R  +  + +  G    M+   + +Y ++PI++A+K+LN+  T+LKK CR  G+ RWP+RK
Sbjct: 147 RIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRK 206

Query: 132 IRSYERRIAALRATMNSSYGDT---RVRAEAEIERVQKELTD 160
           + S    IA L+  + ++ G T   ++R   E+  ++K++ +
Sbjct: 207 LTSLNALIANLKDLLGNTKGRTPKSKLRNALELLEMEKKMIE 244

[Close]
BLAST of Csa6G362990 vs. Swiss-Prot
Match: NLP3_ORYSJ (Protein NLP3 OS=Oryza sativa subsp. japonica GN=NLP3 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.9e-08
Identity = 33/111 (29.73%), Postives = 54/111 (48.65%), Query Frame = 1 

Query: 31  LSPDNSEDDEMEQPTPDCQNEPPE-QPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLP 90
           L+ DNS+++      P+            +PP RR   A +      ++++ + +Y    
Sbjct: 557 LADDNSQNNGASVGRPNGSGASDSLHKSNKPPERRRGKAEKT-----ISLDVLQQYFSGS 616

Query: 91  ISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG 141
           +  A+K L VC T +K+ICR+ G+SRWP RKI    R ++ L+  + S  G
Sbjct: 617 LKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKQVIESVQG 662

[Close]
BLAST of Csa6G362990 vs. Swiss-Prot
Match: RKD5_ARATH (Protein RKD5 OS=Arabidopsis thaliana GN=RKD5 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 37/123 (30.08%), Postives = 58/123 (47.15%), Query Frame = 1 

Query: 37  EDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKK 96
           E+D+ EQ   D + E  ++ +  P R              +++ ++ +Y  L I EAS+ 
Sbjct: 212 ENDKTEQSESDAKTEILKKKKRTPSRH----------VAELSLEELSKYFDLTIVEASRN 271

Query: 97  LNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKE 156
           L V  TVLKK CR  G+ RWP+RKI+S +  I  L+             A A  ++ +K 
Sbjct: 272 LKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEKQQEKNEAAAMAVAKKQEKL 324

Query: 157 LTD 160
            T+
Sbjct: 332 ETE 324

[Close]
BLAST of Csa6G362990 vs. Swiss-Prot
Match: NLP1_ORYSJ (Protein NLP1 OS=Oryza sativa subsp. japonica GN=NLP1 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-07
Identity = 34/119 (28.57%), Postives = 63/119 (52.94%), Query Frame = 1 

Query: 31  LSPDNS--------EDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGR-MTVND 90
           ++PD S        ED ++++ T  C ++P     ++   +R      R +T + +++ D
Sbjct: 576 MAPDGSMFSGFKRHEDYDVKENT--CSSDPSNSNSDKAVEKR------RTKTEKTVSLQD 635

Query: 91  VWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG 141
           + ++    + EA+K L VC T LK+ICR+ G++RWP RKI+     +  L+  ++S +G
Sbjct: 636 LRKHFAGSLKEAAKNLGVCPTTLKRICRQHGINRWPSRKIKKVGHSLKKLQMVIDSVHG 686

[Close]
BLAST of Csa6G362990 vs. Swiss-Prot
Match: NLP2_ORYSJ (Protein NLP2 OS=Oryza sativa subsp. japonica GN=NLP2 PE=2 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-07
Identity = 32/92 (34.78%), Postives = 44/92 (47.83%), Query Frame = 1 

Query: 53  PEQPEEQPPRRRPSLAAQRQRTGRMTVNDVW-EYLHLPISEASKKLNVCNTVLKKICRRS 112
           PE  E+  P        +R    +    DV  +Y    + +A+K L VC T LK+ICR  
Sbjct: 543 PELAEQVQPSSIGHAEKKRSTAEKNISLDVLRKYFSGSLKDAAKSLGVCPTTLKRICRHH 602

Query: 113 GLSRWPYRKIRSYERRIAALRATMNSSYGDTR 144
           G+SRWP RKI    R +  ++  +NS +G  R
Sbjct: 603 GISRWPSRKINKVNRSLKKIQTVINSVHGVDR 634

[Close]
BLAST of Csa6G362990 vs. TrEMBL
Match: A0A0A0KGT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G362990 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.2e-92
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1 

Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP
Sbjct: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
           PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK
Sbjct: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 167
           IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
Sbjct: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 166

[Close]
BLAST of Csa6G362990 vs. TrEMBL
Match: A0A0A0L2U8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646380 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.3e-38
Identity = 90/176 (51.14%), Postives = 118/176 (67.05%), Query Frame = 1 

Query: 2   IPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNS-----------EDDEMEQPTPDCQN 61
           +P+P+S+FYD LC+G+DW ++        L P +S           E+ E +Q   + Q+
Sbjct: 8   LPEPLSDFYDILCIGLDWNDD-EAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQS 67

Query: 62  EPPEQPEEQPPRRRPS--LAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKIC 121
            PP  PE    RR P   LA QRQR GRMTVND+ EYLHLPISEA+KK+N+C TV+KKIC
Sbjct: 68  HPP--PEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKIC 127

Query: 122 RRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARI 165
           RRSGL RWPYRK++SY+R++ AL   + S    TR RAEAE+ER+++EL  FCA I
Sbjct: 128 RRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGI 180

[Close]
BLAST of Csa6G362990 vs. TrEMBL
Match: F8WLA7_CITUN (Putative uncharacterized protein ORF40 OS=Citrus unshiu GN=ORF40 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.9e-33
Identity = 73/162 (45.06%), Postives = 109/162 (67.28%), Query Frame = 1 

Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           M+PDP+S+FY+A+CVG+   +NL TD + Q    NS ++EM QP  D +NE         
Sbjct: 198 MLPDPLSDFYEAVCVGLVLDDNLTTDDYSQPPMTNSGENEMHQP--DMENEAERTT---- 257

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
              R SL+AQR+RTG++T+ D+  Y HLPI EA++++ +C TV+KKICRR GL RWP+RK
Sbjct: 258 ---RTSLSAQRERTGKLTLRDLMIYFHLPIEEAARRMKLCPTVVKKICRRDGLHRWPHRK 317

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCA 163
           I+S +RR++     + S+  + R  A+ EI+R+Q+E+   CA
Sbjct: 318 IKSIQRRMSVASGRLRSNDAEERANAQIEIQRLQEEMAAACA 350

[Close]
BLAST of Csa6G362990 vs. TrEMBL
Match: V7ATG7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G080800g PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.1e-28
Identity = 68/179 (37.99%), Postives = 103/179 (57.54%), Query Frame = 1 

Query: 2   IPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNS---EDDEMEQPTPDCQNEPPEQPEE 61
           + DP+S++YD +C G+DW E+ N DG   LSP NS   E D   +P P+ + EP   PE 
Sbjct: 366 LDDPLSSYYDTICTGLDWVEHYN-DGDDDLSPPNSTEPESDSEPEPEPEPEPEPETIPES 425

Query: 62  QP-------------PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLK 121
            P             P+ + ++A QR+R  +MT+ND+  + HL I +A+ KL+V ++V+K
Sbjct: 426 DPVPEPHNGEASTTKPKPKRNMAVQRKRVPKMTMNDLSPFFHLTIRDAADKLDVSDSVVK 485

Query: 122 KICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARI 165
           KI R   L RWP RK++S  + +  LR  +NS Y  T  R   EI+R+Q+E+   C  +
Sbjct: 486 KISRLGNLKRWPQRKLQSLAKDVRVLRKALNSPYEGTSKRVRQEIQRLQREMVAVCGGV 543

[Close]
BLAST of Csa6G362990 vs. TrEMBL
Match: A0A067G1W6_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041600mg PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-25
Identity = 62/162 (38.27%), Postives = 95/162 (58.64%), Query Frame = 1 

Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           M+PDP+S+FY+A+CVG+   +NL TD +                              QP
Sbjct: 27  MLPDPLSDFYEAVCVGLVLDDNLTTDDY-----------------------------SQP 86

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
           P      + QR+RTG++T+ D+  Y HLPI EA++++ +C TV+KKICRR GL RWP+RK
Sbjct: 87  PMTN---SVQRERTGKLTLRDLMIYFHLPIEEAARRMKLCPTVVKKICRRDGLHRWPHRK 146

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCA 163
           I+S +RR++     + S+  + R  A+ EI+R+Q+E+   CA
Sbjct: 147 IKSIQRRMSVASGRLRSNDAEERANAQIEIQRLQEEMAAACA 156

[Close]
BLAST of Csa6G362990 vs. TAIR10
Match: AT5G66990.1 (AT5G66990.1 RWP-RK domain-containing protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-09
Identity = 43/162 (26.54%), Postives = 81/162 (50.00%), Query Frame = 1 

Query: 12  ALCVGIDWFENLNTDGFFQLSPDNSE--------DDEMEQPTPDCQNEPPEQPEEQPPRR 71
           +L +   W+   N +   Q+ P+  E        D  MEQ      +E     +E+  ++
Sbjct: 87  SLDISSGWWNENNGNYNNQVEPNLDEISRTNTMGDPNMEQ----ILHEDVNTMKEKTSQK 146

Query: 72  RPSLAAQRQRTG---RMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 131
           R  +  + +  G    M+   + +Y ++PI++A+K+LN+  T+LKK CR  G+ RWP+RK
Sbjct: 147 RIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRK 206

Query: 132 IRSYERRIAALRATMNSSYGDT---RVRAEAEIERVQKELTD 160
           + S    IA L+  + ++ G T   ++R   E+  ++K++ +
Sbjct: 207 LTSLNALIANLKDLLGNTKGRTPKSKLRNALELLEMEKKMIE 244

[Close]
BLAST of Csa6G362990 vs. TAIR10
Match: AT4G35590.1 (AT4G35590.1 RWP-RK domain-containing protein)

HSP 1 Score: 57.8 bits (138), Expect = 7.6e-09
Identity = 37/123 (30.08%), Postives = 58/123 (47.15%), Query Frame = 1 

Query: 37  EDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKK 96
           E+D+ EQ   D + E  ++ +  P R              +++ ++ +Y  L I EAS+ 
Sbjct: 212 ENDKTEQSESDAKTEILKKKKRTPSRH----------VAELSLEELSKYFDLTIVEASRN 271

Query: 97  LNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKE 156
           L V  TVLKK CR  G+ RWP+RKI+S +  I  L+             A A  ++ +K 
Sbjct: 272 LKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEKQQEKNEAAAMAVAKKQEKL 324

Query: 157 LTD 160
            T+
Sbjct: 332 ETE 324

[Close]
BLAST of Csa6G362990 vs. TAIR10
Match: AT4G38340.1 (AT4G38340.1 Plant regulator RWP-RK family protein)

HSP 1 Score: 57.4 bits (137), Expect = 9.9e-09
Identity = 36/122 (29.51%), Postives = 57/122 (46.72%), Query Frame = 1 

Query: 29  FQLSPDNSEDDEM------EQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGR----MT 88
           FQ SP    DD        +  TP    E P+  +        S    R+R  +    +T
Sbjct: 441 FQSSPHLMVDDNQIAEEVRDAATPPLTQEDPKGKQVSFSFSSASSLENRKRKTKAEKDIT 500

Query: 89  VNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSS 141
           ++ + ++    + +A+K + VC T LK+ICR++G+SRWP RKI+     +  L+  M+S 
Sbjct: 501 LDTLRQHFAGSLKDAAKNIGVCPTTLKRICRQNGISRWPSRKIKKVGHSLRKLQVVMDSV 560

[Close]
BLAST of Csa6G362990 vs. TAIR10
Match: AT1G64530.1 (AT1G64530.1 Plant regulator RWP-RK family protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08
Identity = 33/110 (30.00%), Postives = 56/110 (50.91%), Query Frame = 1 

Query: 31  LSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPI 90
           L+ D  E++E++      Q   P  PE +  ++      + ++T  + V  + +Y    +
Sbjct: 514 LNSDFMENNEVDDGVERFQTLDPI-PEAKTVKKSERKRGKTEKTISLEV--LQQYFAGSL 573

Query: 91  SEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG 141
            +A+K L VC T +K+ICR+ G+SRWP RKI    R +  L+  ++S  G
Sbjct: 574 KDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLTRLKHVIDSVQG 620

[Close]
BLAST of Csa6G362990 vs. TAIR10
Match: AT5G53040.1 (AT5G53040.1 RWP-RK domain-containing protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.2e-08
Identity = 38/125 (30.40%), Postives = 62/125 (49.60%), Query Frame = 1 

Query: 18  DWFENLNTDG-------FFQLSPDNSEDDEMEQPTPDCQNE---PPEQPEEQPPRRRPSL 77
           D+FEN+  D             P  S D     P    QN+      + E+   +++ +L
Sbjct: 82  DFFENIEVDNTIPSDIHLLTQEPYFSSDSSSSSPLA-IQNDGLISNVKVEKVTVKKKRNL 141

Query: 78  AAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERR 133
             +RQ   ++ ++++ ++   PI +A+K+LNV  TVLKK CR  G+ RWP+RK++S    
Sbjct: 142 KKKRQ--DKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSL 201

[Close]
BLAST of Csa6G362990 vs. NCBI nr
Match: gi|778722257|ref|XP_011658444.1| (PREDICTED: protein RKD2-like [Cucumis sativus])

HSP 1 Score: 347.1 bits (889), Expect = 1.8e-92
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1 

Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP
Sbjct: 195 MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 254

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
           PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK
Sbjct: 255 PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 314

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 167
           IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
Sbjct: 315 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 360

[Close]
BLAST of Csa6G362990 vs. NCBI nr
Match: gi|700192388|gb|KGN47592.1| (hypothetical protein Csa_6G362990 [Cucumis sativus])

HSP 1 Score: 347.1 bits (889), Expect = 1.8e-92
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1 

Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP
Sbjct: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
           PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK
Sbjct: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 167
           IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
Sbjct: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 166

[Close]
BLAST of Csa6G362990 vs. NCBI nr
Match: gi|659089471|ref|XP_008445526.1| (PREDICTED: protein RKD2-like isoform X1 [Cucumis melo])

HSP 1 Score: 334.0 bits (855), Expect = 1.6e-88
Identity = 162/166 (97.59%), Postives = 163/166 (98.19%), Query Frame = 1 

Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSED+EMEQ TPDCQNEPPEQPEEQP
Sbjct: 206 MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDEEMEQTTPDCQNEPPEQPEEQP 265

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
           P RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK
Sbjct: 266 P-RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 325

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 167
           IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKEL DFCARIRI
Sbjct: 326 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFCARIRI 370

[Close]
BLAST of Csa6G362990 vs. NCBI nr
Match: gi|659089473|ref|XP_008445527.1| (PREDICTED: uncharacterized protein LOC103488516 isoform X2 [Cucumis melo])

HSP 1 Score: 327.4 bits (838), Expect = 1.5e-86
Identity = 161/166 (96.99%), Postives = 162/166 (97.59%), Query Frame = 1 

Query: 1   MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQP 60
           MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNS D+EMEQ TPDCQNEPPEQPEEQP
Sbjct: 206 MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNS-DEEMEQTTPDCQNEPPEQPEEQP 265

Query: 61  PRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 120
           P RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK
Sbjct: 266 P-RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRK 325

Query: 121 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI 167
           IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKEL DFCARIRI
Sbjct: 326 IRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFCARIRI 369

[Close]
BLAST of Csa6G362990 vs. NCBI nr
Match: gi|778697847|ref|XP_004141337.2| (PREDICTED: uncharacterized protein LOC101213670 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 1.9e-38
Identity = 90/176 (51.14%), Postives = 118/176 (67.05%), Query Frame = 1 

Query: 2   IPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNS-----------EDDEMEQPTPDCQN 61
           +P+P+S+FYD LC+G+DW ++        L P +S           E+ E +Q   + Q+
Sbjct: 215 LPEPLSDFYDILCIGLDWNDD-EAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQS 274

Query: 62  EPPEQPEEQPPRRRPS--LAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKIC 121
            PP  PE    RR P   LA QRQR GRMTVND+ EYLHLPISEA+KK+N+C TV+KKIC
Sbjct: 275 HPP--PEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKIC 334

Query: 122 RRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARI 165
           RRSGL RWPYRK++SY+R++ AL   + S    TR RAEAE+ER+++EL  FCA I
Sbjct: 335 RRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGI 387

The following BLAST results are available for this feature:
BLAST of Csa6G362990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RKD3_ARATH2.1e-0826.54Protein RKD3 OS=Arabidopsis thaliana GN=RKD3 PE=3 SV=1[more]
NLP3_ORYSJ7.9e-0829.73Protein NLP3 OS=Oryza sativa subsp. japonica GN=NLP3 PE=3 SV=1[more]
RKD5_ARATH1.3e-0730.08Protein RKD5 OS=Arabidopsis thaliana GN=RKD5 PE=3 SV=1[more]
NLP1_ORYSJ1.8e-0728.57Protein NLP1 OS=Oryza sativa subsp. japonica GN=NLP1 PE=2 SV=1[more]
NLP2_ORYSJ1.8e-0734.78Protein NLP2 OS=Oryza sativa subsp. japonica GN=NLP2 PE=2 SV=2[more]
BLAST of Csa6G362990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGT8_CUCSA1.2e-92100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G362990 PE=4 SV=1[more]
A0A0A0L2U8_CUCSA1.3e-3851.14Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646380 PE=4 SV=1[more]
F8WLA7_CITUN2.9e-3345.06Putative uncharacterized protein ORF40 OS=Citrus unshiu GN=ORF40 PE=4 SV=1[more]
V7ATG7_PHAVU8.1e-2837.99Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G080800g PE=4 SV=1[more]
A0A067G1W6_CITSI1.0e-2538.27Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041600mg PE=4 S... [more]
BLAST of Csa6G362990 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G66990.11.2e-0926.54 RWP-RK domain-containing protein[more]
AT4G35590.17.6e-0930.08 RWP-RK domain-containing protein[more]
AT4G38340.19.9e-0929.51 Plant regulator RWP-RK family protein[more]
AT1G64530.11.3e-0830.00 Plant regulator RWP-RK family protein[more]
AT5G53040.12.2e-0830.40 RWP-RK domain-containing protein[more]
BLAST of Csa6G362990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778722257|ref|XP_011658444.1|1.8e-92100.00PREDICTED: protein RKD2-like [Cucumis sativus][more]
gi|700192388|gb|KGN47592.1|1.8e-92100.00hypothetical protein Csa_6G362990 [Cucumis sativus][more]
gi|659089471|ref|XP_008445526.1|1.6e-8897.59PREDICTED: protein RKD2-like isoform X1 [Cucumis melo][more]
gi|659089473|ref|XP_008445527.1|1.5e-8696.99PREDICTED: uncharacterized protein LOC103488516 isoform X2 [Cucumis melo][more]
gi|778697847|ref|XP_004141337.2|1.9e-3851.14PREDICTED: uncharacterized protein LOC101213670 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G362990.1Csa6G362990.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 77..123
score: 3.6
IPR003035RWP-RK domainPROFILEPS51519RWP_RKcoord: 64..144
score: 17
NoneNo IPR availableunknownCoilCoilcoord: 143..163
scor
NoneNo IPR availablePANTHERPTHR32002FAMILY NOT NAMEDcoord: 1..159
score: 3.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G362990MELO3C011480Melon (DHL92) v3.5.1cumeB466
Csa6G362990Lsi08G008400Bottle gourd (USVL1VR-Ls)culsiB470
Csa6G362990Bhi04G001179Wax gourdcuwgoB587
Csa6G362990CSPI06G19130Wild cucumber (PI 183967)cpicuB313
Csa6G362990CsGy6G018570Cucumber (Gy14) v2cgybcuB281
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G362990Melon (DHL92) v3.6.1cumedB447
Csa6G362990Silver-seed gourdcarcuB0158
Csa6G362990Watermelon (97103) v2cuwmbB487
Csa6G362990Cucumber (Gy14) v1cgycuB041
Csa6G362990Cucurbita maxima (Rimu)cmacuB195
Csa6G362990Cucurbita maxima (Rimu)cmacuB805
Csa6G362990Cucurbita moschata (Rifu)cmocuB179
Csa6G362990Cucurbita moschata (Rifu)cmocuB796
Csa6G362990Watermelon (Charleston Gray)cuwcgB496
Csa6G362990Watermelon (97103) v1cuwmB456
Csa6G362990Cucurbita pepo (Zucchini)cpecuB119
Csa6G362990Cucurbita pepo (Zucchini)cpecuB841